Citrus Sinensis ID: 043958

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160---
Protein Sequence
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRFG
Secondary Structure (PSIPRED)
ccHHHHHHHHHcccccccEEccccccccccccccccccccccccccccccccEEEEEccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccEEEEEcccHcHEEEcccccccHcHccHHEEccccccEccccEEEEccccccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHccccHcccccccccccHHHHHHHHHHHHHHccccHHccccHHHHHHHHHcccccc
Coil and Loop (DISEMBL)
MEIANALAYlhvgfprpivfkniklssilfdEDHVAKLFdfslaesipdgethikdaipigIMGFVATEyvttgdynekcdvfsfagDRHWLLNRVKKhiecntfdeivdpvireelciqsSEKDKQVQAFVELAVKCVsesaedrptMIDVAKQLRQAYRFG
Flexible Loop (DISEMBL)
MEIANALaylhvgfpRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVsesaedrptmidVAKQLRQAYRFG
Low Complexity Region (SEG)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRFG
Disordered region (IsUnstruct)
***ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCV************************
Disordered Region (DISOPRED)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESA**RPTMIDVAKQLRQAYRF*
Disordered Region (DISEMBL)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRFG
Disordered Region (DISPRO)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP**IDV***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRFG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	163	2.2.26 [Sep-21-2011]
O64798	389	Inactive serine/threonine	yes	no	0.926	0.388	0.378	3e-23
O80795	372	Probable inactive recepto	no	no	0.975	0.427	0.350	8e-22
C0LGL4	880	Probable LRR receptor-lik	no	no	0.926	0.171	0.348	2e-18
Q9LFP7	493	Probable receptor-like pr	no	no	0.901	0.298	0.327	1e-17
Q9SJG2	494	Probable receptor-like pr	no	no	0.895	0.295	0.321	1e-16
Q8GXZ3	410	Serine/threonine-protein	no	no	0.895	0.356	0.308	1e-16
Q9M092	786	Wall-associated receptor	no	no	0.926	0.192	0.316	2e-16
Q9SRH7	490	Receptor-like serine/thre	no	no	0.901	0.3	0.310	3e-16
Q9LMN6	738	Wall-associated receptor	no	no	0.914	0.201	0.321	3e-16
Q9LMN8	741	Wall-associated receptor	no	no	0.914	0.201	0.321	5e-16

>sp|O64798|Y1747_ARATH Inactive serine/threonine-protein kinase At1g67470 OS=Arabidopsis thaliana GN=At1g67470 PE=2 SV=1

 Score =  107 bits (268), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 97/177 (54%), Gaps = 26/177 (14%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SIP+GET ++     G
Sbjct: 154 DIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQVDYIAG 213

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLL------NRV-------KKHIECNTFDEI 108
            + ++   Y+  G  +E+ DVF+       LL      +R+        K +E    DEI
Sbjct: 214 TVDYLKPNYLKHGVVSEETDVFAVGHSMQMLLMGEKIFDRIMRRPFPTSKFMEEPKMDEI 273

Query: 109 VDP----VIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
            DP    +  EELC        Q++AF+ L+++C     E  PTM++VAK+L+   R
Sbjct: 274 ADPEMGEISEEELC--------QMKAFLLLSLRCTGHVGE-VPTMVEVAKELKSIQR 321

Arabidopsis thaliana (taxid: 3702)

>sp|O80795|Y1652_ARATH Probable inactive receptor-like protein kinase At1g65250 OS=Arabidopsis thaliana GN=At1g65250 PE=2 SV=1

 Score =  102 bits (255), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 32/191 (16%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA ALAYLH  FPRP V++ +   +IL DED VAKL DFS   SIP+GET ++    +G
Sbjct: 153 DIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSIPEGETFVRVDRDVG 212

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA---GDR----------HW-------------LLNR 95
           +  + A  YV +G  ++K DVF+F    G R          H+             L+ R
Sbjct: 213 LYSYFADNYVRSGLVSDKTDVFAFGIFMGHRLLLGYEYYFEHYRGEEEESEDGFDSLMKR 272

Query: 96  VKKHI-----ECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI 150
             +++     E    +EI D  + E++   S ++  Q++AF++L+++C   S E+ PTM+
Sbjct: 273 HARNLLSTLKEDRPMEEIADSKMIEKMGQISEQERCQMKAFLKLSLRCTGPS-EEVPTMV 331

Query: 151 DVAKQLRQAYR 161
           +VAK+L +  R
Sbjct: 332 EVAKELNKIQR 342

Arabidopsis thaliana (taxid: 3702)

>sp|C0LGL4|Y2289_ARATH Probable LRR receptor-like serine/threonine-protein kinase At2g28960 OS=Arabidopsis thaliana GN=At2g28960 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 24/175 (13%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP-DGETHIKDAIP 59
           +E A  L YLH G   P+V +++K ++IL DE   AKL DF L+ S P  GETH+  A+ 
Sbjct: 677 VETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAV- 735

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFA-------GDRHWL-LNRVKKHIEC--------N 103
            G  G++  EY  T   NEK DV+SF          R  +   R K HI           
Sbjct: 736 AGTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAWVGYMLTKG 795

Query: 104 TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
             + +VDP +  +       +   V   +E+A+ CV+ S+E RPTM  V  +L+Q
Sbjct: 796 DIENVVDPRLNRDY------EPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQ 844

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LFP7|Y5158_ARATH Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 57/174 (32%), Positives = 89/174 (51%), Gaps = 27/174 (15%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L++LH    +P+++++ K S+IL D D+ AKL DF LA+  PD G+TH+   + +G 
Sbjct: 257 AKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRV-MGT 315

Query: 63  MGFVATEYVTTGDYNEKCDVFSFA--------GDR----------HWLLNRVKKH-IECN 103
            G+ A EYV TG    K DV+SF         G R          H L+   + H ++  
Sbjct: 316 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLLDKR 375

Query: 104 TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR 157
            F  ++DP +     I+ ++K  Q      LA +C+S   + RP M DV + L+
Sbjct: 376 RFYRLLDPRLEGHFSIKGAQKVTQ------LAAQCLSRDPKIRPKMSDVVEALK 423

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SJG2|Y2296_ARATH Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=3 SV=1

 Score = 85.9 bits (211), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 25/171 (14%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           A ALAYLH      +V ++IK S+IL D++  AKL DF LA+ +  GE+HI   + +G  
Sbjct: 291 AQALAYLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRV-MGTF 349

Query: 64  GFVATEYVTTGDYNEKCDVFSFA------------------GDRHWLLNRVKKHIECNTF 105
           G+VA EY  TG  NEK D++SF                    +   L+  +K  +     
Sbjct: 350 GYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKMMVGTRRA 409

Query: 106 DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
           +E+VDP       ++       ++  + ++++CV   AE RP M  VA+ L
Sbjct: 410 EEVVDPR------LEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARML 454

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8GXZ3|Y5102_ARATH Serine/threonine-protein kinase At5g01020 OS=Arabidopsis thaliana GN=At5g01020 PE=1 SV=1

 Score = 85.5 bits (210), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 32/178 (17%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG-ETHIKDAIP 59
           +  A  LA+LH    RP+++++ K S+IL D D+ AKL DF LA++ P G ETH+   + 
Sbjct: 179 LGAAKGLAFLH-NAERPVIYRDFKTSNILLDSDYTAKLSDFGLAKAGPQGDETHVSTRV- 236

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFA--------GDRHWLLNRVKKHIECNTFD----- 106
           +G  G+ A EYV TG    + DV+SF         G +   +++ +   E N  D     
Sbjct: 237 MGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEMLTGRKS--VDKTRPSKEQNLVDWARPK 294

Query: 107 --------EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
                   +I+DP +  +  +++++K         LA  C+S++ + RP M DV + L
Sbjct: 295 LNDKRKLLQIIDPRLENQYSVRAAQKA------CSLAYYCLSQNPKARPLMSDVVETL 346

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9M092|WAKLM_ARATH Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=3 SV=2

 Score = 85.1 bits (209), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 26/177 (14%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++IA AL+YLH     PI  ++IK ++IL DE + AK+ DF  + S+   +TH    I  
Sbjct: 549 VDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVADFGTSRSVTIDQTHWTTVIS- 607

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA--------GDRHWLLNRVKKHI-----------E 101
           G +G+V  EY  +  Y EK DV+SF         GD+  ++ +  + I           +
Sbjct: 608 GTVGYVDPEYYRSSQYTEKSDVYSFGVILAELITGDKPVIMVQNTQEIIALAEHFRVAMK 667

Query: 102 CNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
                +I+D  IR++       K +QV A   LA+KC+S    +RP M +V  +L +
Sbjct: 668 ERRLSDIMDARIRDD------SKPEQVMAVANLAMKCLSSRGRNRPNMREVFTELER 718

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9SRH7|Y3130_ARATH Receptor-like serine/threonine-protein kinase At3g01300 OS=Arabidopsis thaliana GN=At3g01300 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 27/174 (15%)

Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L++LH    +P+++++ K S+IL D ++ AKL DF LA+  PD G+TH+   + +G 
Sbjct: 251 AKGLSFLHEEALKPVIYRDFKTSNILLDGEYNAKLSDFGLAKDAPDEGKTHVSTRV-MGT 309

Query: 63  MGFVATEYVTTGDYNEKCDVFSFA--------GDR----------HWLLNRVKKH-IECN 103
            G+ A EYV TG    K DV+SF         G R          H L+   + H ++  
Sbjct: 310 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLLDKR 369

Query: 104 TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR 157
            F  ++DP +     ++ ++K  Q      LA +C+S  ++ RP M +V + L+
Sbjct: 370 RFYRLLDPRLEGHFSVKGAQKVTQ------LAAQCLSRDSKIRPKMSEVVEVLK 417

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LMN6|WAK4_ARATH Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1

 Score = 84.3 bits (207), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 25/174 (14%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +EIA  LAYLH     PI+ ++IK ++IL DE+  AK+ DF  +  IP  +  +   +  
Sbjct: 514 VEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASRLIPMDKEDLATMVQ- 572

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF--------AGDRHWLLNR--VKKHI--------EC 102
           G +G++  EY  TG  NEK DV+SF        +G +     R    KHI        + 
Sbjct: 573 GTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQTSKHIVSYFASATKE 632

Query: 103 NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
           N   EI+D  +  E         +++Q    +AV+C   + E+RP M +VA +L
Sbjct: 633 NRLHEIIDGQVMNE------NNQREIQKAARIAVECTRLTGEERPGMKEVAAEL 680

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9LMN8|WAK3_ARATH Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2

 Score = 83.6 bits (205), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 87/174 (50%), Gaps = 25/174 (14%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +E+A  LAYLH     PI+ ++IK ++IL DE+  AK+ DF  ++ IP  +  +   +  
Sbjct: 519 IEVAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVADFGASKLIPMDKEQLTTMVQ- 577

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF--------AGDRHWLLNR--VKKHI--------EC 102
           G +G++  EY TTG  NEK DV+SF        +G +     R    KH+        E 
Sbjct: 578 GTLGYLDPEYYTTGLLNEKSDVYSFGVVLMELLSGQKALCFERPQASKHLVSYFVSATEE 637

Query: 103 NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
           N   EI+D  +  E      +  K++Q    +A +C     E+RP M +VA +L
Sbjct: 638 NRLHEIIDDQVLNE------DNLKEIQEAARIAAECTRLMGEERPRMKEVAAKL 685

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component. Binding to pectin may have significance in the control of cell expansion, morphogenesis and development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
255542662	330	serine-threonine protein kinase, plant-t	0.957	0.472	0.469	9e-38
224123144	344	predicted protein [Populus trichocarpa]	0.963	0.456	0.449	3e-34
255582635	331	receptor protein kinase, putative [Ricin	0.950	0.468	0.477	3e-34
255542668	307	serine-threonine protein kinase, plant-t	0.963	0.511	0.446	2e-33
255542656	331	serine-threonine protein kinase, plant-t	0.963	0.474	0.430	6e-31
224065631	323	predicted protein [Populus trichocarpa]	0.963	0.486	0.402	2e-27
255542658	356	serine-threonine protein kinase, plant-t	0.963	0.441	0.373	2e-25
297740943	321	unnamed protein product [Vitis vinifera]	0.969	0.492	0.382	2e-24
359495254	331	PREDICTED: wall-associated receptor kina	0.944	0.465	0.385	8e-24
255539344	340	receptor protein kinase, putative [Ricin	0.981	0.470	0.374	1e-23

>gi|255542662|ref|XP_002512394.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548355|gb|EEF49846.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  161 bits (407), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 84/179 (46%), Positives = 117/179 (65%), Gaps = 23/179 (12%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IAN + Y+H  FPRPIV +NIK S+IL DED+VAKL DFSL  SIP+G++ ++D I  G
Sbjct: 149 DIANVVVYIHTAFPRPIVHRNIKASNILLDEDYVAKLSDFSLCVSIPEGKSRVRD-IMAG 207

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA--------------------GDRHWLLNRVKKHIE 101
            MG +A+E + TG +NEK DV+SF                     G++  L+N VKKHIE
Sbjct: 208 TMGLIASESLATGYFNEKSDVYSFGVVLLVVLTGQRSFDFSRTETGEQFLLVNHVKKHIE 267

Query: 102 CNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
              F E+VDP+I  E     + K ++++ F +LA++C+ +SAE+RPTMI+VAKQLR  Y
Sbjct: 268 TGGFKEMVDPIIVAEEA--GNRKGQELEDFRDLALRCIHDSAEERPTMIEVAKQLRHIY 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224123144|ref|XP_002319005.1| predicted protein [Populus trichocarpa] gi|222857381|gb|EEE94928.1| predicted protein [Populus trichocarpa]

 Score =  150 bits (378), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 120/178 (67%), Gaps = 21/178 (11%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           M++ANA+A+LH  F +PIVF+NIK  +IL D++H AKL DFS++ SIP GE+H++D++  
Sbjct: 161 MDMANAVAFLHAAFSKPIVFRNIKPLNILLDDNHEAKLSDFSISISIPKGESHVRDSVA- 219

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA-----------------GDRHWLL-NRVKKHIEC 102
           G  G +A EY+TTG++NEK DVF+F                   ++  LL + VKK IE 
Sbjct: 220 GATGLIAPEYLTTGNFNEKQDVFNFGVFLLVLLSGQMVVDFSRPEKEILLQDHVKKCIED 279

Query: 103 NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           + F++++D  I  E       K++Q+QA+  L+++C+SE AEDRPTMIDV+K+LR+ Y
Sbjct: 280 DRFNKVIDSTIIAEGTWPG--KEQQLQAYTALSLRCISELAEDRPTMIDVSKELRKIY 335

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255582635|ref|XP_002532098.1| receptor protein kinase, putative [Ricinus communis] gi|223528232|gb|EEF30288.1| receptor protein kinase, putative [Ricinus communis]

 Score =  149 bits (376), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/178 (47%), Positives = 112/178 (62%), Gaps = 23/178 (12%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +EIANA++YLH  F RPIVF+NIK  +I  DE HVAKL DFSLA SIP+GE+H+KD +  
Sbjct: 154 VEIANAVSYLHTAFSRPIVFRNIKPLNIFLDECHVAKLSDFSLAVSIPEGESHVKDMLA- 212

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF--------------------AGDRHWLLNRVKKHI 100
           G  G +A EY  T  +NE  DV++F                    AG+   L++ VKK I
Sbjct: 213 GAWGLIAPEYAKTSCFNESQDVYNFGVFLLMLLTGQKVVDSYRPQAGEELGLVDHVKKFI 272

Query: 101 ECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
             + F E VD +I  E  +   EKD+Q+QAF  L+ +C+SE+ EDRP MIDVAK+LR+
Sbjct: 273 ADDRFYETVDSIILGEGSL--PEKDQQLQAFTLLSFRCISEADEDRPMMIDVAKELRK 328

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542668|ref|XP_002512397.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548358|gb|EEF49849.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/179 (44%), Positives = 115/179 (64%), Gaps = 22/179 (12%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A+ ++YLH  FPRPIV ++I LS+IL DED++AK+  FSL+ SIP+G+THI+D + +
Sbjct: 125 VDVASVISYLHSAFPRPIVHRDITLSNILLDEDYIAKVTGFSLSMSIPEGKTHIEDEV-V 183

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGD-------------------RHWLLNRVKKHIE 101
           G  G++A  Y  T  +NEK DV+SF                      R+ L+N VK+ IE
Sbjct: 184 GTPGYLAPAYFKTLMFNEKIDVYSFGVLLLVLLTGQQPILHSPTTTARYSLVNFVKEKIE 243

Query: 102 CNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
              FDEI+DPVI EE      EK++Q++ F+ LA++C  E+ EDRP + DVAKQLR  Y
Sbjct: 244 DERFDEIIDPVILEEG--PWPEKERQLEIFLTLAMQCTHENEEDRPEITDVAKQLRHIY 300

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542656|ref|XP_002512391.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548352|gb|EEF49843.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  139 bits (349), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 110/179 (61%), Gaps = 22/179 (12%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A+ +AYLH  FPRPIV ++I L+SIL DED  AK+  FSL+ SIP+GETHI+D +  
Sbjct: 149 VDVASVIAYLHTAFPRPIVHRDISLASILLDEDCAAKVTGFSLSISIPEGETHIEDEVA- 207

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA-------------------GDRHWLLNRVKKHIE 101
           G +G+VA EY     +NEK DV+SF                     + H L+  V+  I+
Sbjct: 208 GTIGYVAPEYFMKRMFNEKIDVYSFGVVLLVLLTGHGPILRSPTTNESHALVVFVEAKIK 267

Query: 102 CNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
              F+EI+DP I EE      EK++Q+++F+ LA++C  +  EDRP + DVAKQLR  Y
Sbjct: 268 NERFNEIIDPAILEEG--PWPEKEQQLKSFLTLAMQCTRKDEEDRPEITDVAKQLRHIY 324

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224065631|ref|XP_002301893.1| predicted protein [Populus trichocarpa] gi|222843619|gb|EEE81166.1| predicted protein [Populus trichocarpa]

 Score =  127 bits (318), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 106/174 (60%), Gaps = 17/174 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EIANA+AYLH  FPRPI+ ++IK ++I  ++++ AKL DFS + SIP+GE+ + D + +G
Sbjct: 147 EIANAVAYLHTAFPRPIIHRDIKPANIFLNQNYAAKLSDFSFSISIPEGESKVGDDLLVG 206

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA--------------GDRHWLLNRVKKHIECNTFDE 107
             GF+  +Y  T    EK DVFSF               G+ H L+  VK  +E +   E
Sbjct: 207 TFGFLDPDYTMTNFVTEKTDVFSFGVLLLVLLTGRATRQGEIH-LIEHVKLLVEQDRVHE 265

Query: 108 IVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
            VDP+IR       +   +Q++A +ELA++C  +S EDRP MI+VAK++++  R
Sbjct: 266 AVDPMIRGNG--GEAIDQQQLEASIELALRCTDDSGEDRPLMIEVAKEIQRIER 317

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255542658|ref|XP_002512392.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223548353|gb|EEF49844.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 41/198 (20%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++ AN +AYLH   PRP+V ++I LS+I  DED+VAK+ DF+++ SI +GETHI+D + +
Sbjct: 158 VDAANVIAYLHTACPRPVVHRDITLSNIWLDEDYVAKVTDFTVSMSILEGETHIEDFV-L 216

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA-------GDRHWLLNRVKKHIECNTFDEI----- 108
           G  G+ A EYV +G +NEK DVFSF         D+       +  ++   FDEI     
Sbjct: 217 GTCGYAAPEYVRSGIFNEKIDVFSFGVLLLVLLTDQKPFQGNWENILKDARFDEIIGSLI 276

Query: 109 --------------------------VDPVIREELCIQSSEKDKQVQAFVELAVKCVSES 142
                                     +DP+I EE      EK++Q++AF+ L V+C+   
Sbjct: 277 VEKGLWSEKEQLETFLTRTRQKLDLTIDPIIVEEG--PWPEKEQQLKAFLMLGVQCIDPD 334

Query: 143 AEDRPTMIDVAKQLRQAY 160
            E+RP + DVAKQLR  Y
Sbjct: 335 EENRPEITDVAKQLRHFY 352

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740943|emb|CBI31255.3| unnamed protein product [Vitis vinifera]

 Score =  116 bits (291), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 108/178 (60%), Gaps = 20/178 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IAN +AYLH+ FPR I+  +IK SS   D+D  AKL DFSL+ ++P+GE H++D I  G
Sbjct: 145 DIANVIAYLHIAFPRSIIHTDIKPSSFFLDQDCAAKLSDFSLSITLPEGEMHVEDEIR-G 203

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA--------GDR-HWLLNRVKKHIE------CNTFD 106
             G++A E + +G Y EK DVFSF         G R H +++  +  I+       NT+D
Sbjct: 204 TFGYLAPETLISGVYTEKNDVFSFGILLLELLIGKRAHSIMHEERASIQDYAQSFVNTYD 263

Query: 107 --EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRF 162
              IVDP+I  +   +   ++ Q QA  +LA++C  +  ++RPT+++ AK++R+  +F
Sbjct: 264 INGIVDPIILAQP--RGIHEELQFQAIFDLAMRCSMKDMDERPTIVNAAKEVRRIQKF 319

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359495254|ref|XP_002271826.2| PREDICTED: wall-associated receptor kinase-like 8-like [Vitis vinifera]

 Score =  115 bits (287), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 106/174 (60%), Gaps = 20/174 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IAN +AYLH+ FPR I+  +IK SS   D+D  AKL DFSL+ ++P+GE H++D I  G
Sbjct: 153 DIANVIAYLHIAFPRSIIHTDIKPSSFFLDQDCAAKLSDFSLSITLPEGEMHVEDEIR-G 211

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA--------GDR-HWLLNRVKKHIE------CNTFD 106
             G++A E + +G Y EK DVFSF         G R H +++  +  I+       NT+D
Sbjct: 212 TFGYLAPETLISGVYTEKNDVFSFGILLLELLIGKRAHSIMHEERASIQDYAQSFVNTYD 271

Query: 107 --EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
              IVDP+I  +   +   ++ Q QA  +LA++C  +  ++RPT+++ AK++R+
Sbjct: 272 INGIVDPIILAQP--RGIHEELQFQAIFDLAMRCSMKDMDERPTIVNAAKEVRR 323

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539344|ref|XP_002510737.1| receptor protein kinase, putative [Ricinus communis] gi|223551438|gb|EEF52924.1| receptor protein kinase, putative [Ricinus communis]

 Score =  114 bits (285), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 103/179 (57%), Gaps = 19/179 (10%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +E+A+A+AYLH  F + IV +++K  +I  D +  AKL DFSL  SIP+GE+ +KD    
Sbjct: 155 LEVASAVAYLHTAFSKRIVHRDVKPENIFLDHNFAAKLSDFSLCISIPEGESRVKDCSIT 214

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF------------AGDRHW------LLNRVKKHIEC 102
           G  GF+   YV T    EK DVFSF            A  RH+      +++ V+  +E 
Sbjct: 215 GTWGFLDPNYVLTEFVTEKTDVFSFGVFMLVLLTEQPAFTRHYSENGGSVVDHVEYLVER 274

Query: 103 NTFDEIVDPVIREELCIQ-SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           + FDE+  P I E    +   +   ++QAF ELA++C   + EDRP++++VA+QL++ Y
Sbjct: 275 DRFDEVPGPGILENGRTEIEPQLRSELQAFTELALRCTHLTGEDRPSILEVAQQLQKIY 333

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	163
TAIR|locus:2206235	372	AT1G65250 [Arabidopsis thalian	0.515	0.225	0.488	5.2e-25
TAIR|locus:2008818	389	AT1G67470 [Arabidopsis thalian	0.950	0.398	0.381	6.8e-22
TAIR|locus:2200375	396	AT1G65190 [Arabidopsis thalian	0.515	0.212	0.488	1e-21
TAIR|locus:2076646	334	AT3G57750 [Arabidopsis thalian	0.509	0.248	0.428	1.1e-21
TAIR|locus:2076596	340	AT3G57700 [Arabidopsis thalian	0.503	0.241	0.409	2.9e-21
TAIR|locus:2076686	356	AT3G57640 [Arabidopsis thalian	0.503	0.230	0.471	1.1e-20
TAIR|locus:2076671	355	AT3G57730 [Arabidopsis thalian	0.944	0.433	0.348	2.1e-18
TAIR|locus:2079959	351	AT3G52530 [Arabidopsis thalian	0.552	0.256	0.440	5.5e-18
TAIR|locus:2066133	880	AT2G28960 [Arabidopsis thalian	0.926	0.171	0.348	1.3e-16
TAIR|locus:2147805	493	AT5G15080 [Arabidopsis thalian	0.901	0.298	0.327	7e-16

TAIR|locus:2206235 AT1G65250 [Arabidopsis thaliana (taxid:3702)]

 Score = 203 (76.5 bits), Expect = 5.2e-25, Sum P(2) = 5.2e-25
 Identities = 41/84 (48%), Positives = 56/84 (66%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             +IA ALAYLH  FPRP V++ +   +IL DED VAKL DFS   SIP+GET ++    +G
Sbjct:   153 DIATALAYLHTAFPRPFVYRILSHWNILLDEDGVAKLTDFSHCVSIPEGETFVRVDRDVG 212

Query:    62 IMGFVATEYVTTGDYNEKCDVFSF 85
             +  + A  YV +G  ++K DVF+F
Sbjct:   213 LYSYFADNYVRSGLVSDKTDVFAF 236

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2008818 AT1G67470 [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 6.8e-22, P = 6.8e-22
 Identities = 66/173 (38%), Positives = 97/173 (56%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             +IA ALAYLH  FPRP V++ + L++IL DED VAKL DFS   SIP+GET ++     G
Sbjct:   154 DIATALAYLHTAFPRPFVYRCLSLTNILLDEDGVAKLMDFSFCVSIPEGETFVQVDYIAG 213

Query:    62 IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLL------NRV-------KKHIECNTFDEI 108
              + ++   Y+  G  +E+ DVF+       LL      +R+        K +E    DEI
Sbjct:   214 TVDYLKPNYLKHGVVSEETDVFAVGHSMQMLLMGEKIFDRIMRRPFPTSKFMEEPKMDEI 273

Query:   109 VDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
              DP + E     S E+  Q++AF+ L+++C     E  PTM++VAK+L+   R
Sbjct:   274 ADPEMGEI----SEEELCQMKAFLLLSLRCTGHVGEV-PTMVEVAKELKSIQR 321

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2200375 AT1G65190 [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
 Identities = 41/84 (48%), Positives = 53/84 (63%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             +IA ALAYLH  FPRP+V+  +   +IL DED VAKL DFS   SIP+GET ++     G
Sbjct:   150 DIATALAYLHTAFPRPLVYMILSHRNILLDEDGVAKLTDFSHCVSIPEGETFVRVEAEDG 209

Query:    62 IMGFVATEYVTTGDYNEKCDVFSF 85
                + A  YV +   +EK DVF+F
Sbjct:   210 FYSYFADNYVNSVVVSEKTDVFAF 233

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076646 AT3G57750 [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
 Identities = 36/84 (42%), Positives = 54/84 (64%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             EIA+++ YLH  FP  IV +NI  ++I  DE+  AKL DF    +IP+GE +++D +  G
Sbjct:   153 EIASSVTYLHTAFPETIVHRNINPTNIFIDENWTAKLSDFWFCVAIPEGELYVEDDVK-G 211

Query:    62 IMGFVATEYVTTGDYNEKCDVFSF 85
             ++GFV  +Y  T    EK D++SF
Sbjct:   212 VIGFVDPDYYWTMKVTEKVDIYSF 235

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2076596 AT3G57700 [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
 Identities = 34/83 (40%), Positives = 53/83 (63%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             EIA+A+AYLH  FPR I+ +++KL++I  DE+  AKL  FSL+  +P+GET + D +   
Sbjct:   160 EIADAVAYLHTEFPRTIIHRDLKLANIFLDENWSAKLSSFSLSIVLPEGETGVNDMV-CR 218

Query:    62 IMGFVATEYVTTGDYNEKCDVFS 84
                ++  +Y  TG   E  D++S
Sbjct:   219 TSSYIEPDYFNTGLVTENVDIYS 241

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2076686 AT3G57640 [Arabidopsis thaliana (taxid:3702)]

 Score = 179 (68.1 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
 Identities = 42/89 (47%), Positives = 54/89 (60%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPI 60
             EIA ALAYLH  FPRP V++ ++L  IL D ED VAKL +FS   SIP GET +K  +  
Sbjct:   167 EIATALAYLHTAFPRPFVYRILRLEDILLDDEDGVAKLCNFSYCVSIPQGETFVK--LGN 224

Query:    61 GIMG----FVATEYVTTGDYNEKCDVFSF 85
             G +G    ++   Y+  G  +EK D F F
Sbjct:   225 GCIGGDYDYMDDNYLINGIVSEKTDAFGF 253

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2076671 AT3G57730 [Arabidopsis thaliana (taxid:3702)]

 Score = 224 (83.9 bits), Expect = 2.1e-18, P = 2.1e-18
 Identities = 61/175 (34%), Positives = 95/175 (54%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
             EIANALAYLH+ FP+ I+++++K   +  D +  AKL D S + S+ +G++ I+    +G
Sbjct:   176 EIANALAYLHMAFPKIIIYRDVKPLHVFLDNNWTAKLSDLSFSISLEEGKSQIEAEDVLG 235

Query:    62 IMGFVATEYVTTGDYNEKCDVFSFA----------------GDRH--WLLNRVKKHIECN 103
               G++   Y  T    E  DV+SF                  D +   +L  +K   E  
Sbjct:   236 TYGYLDPLYFATRIVTEYTDVYSFGVFLMVVITGISVYFTGSDGYPVGILGYMKGLAENG 295

Query:   104 TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
               +EIV P+I +E+   +S +  QV+A V LA++C  E  EDRP MI VAK+L++
Sbjct:   296 KLNEIVYPMIMKEM---TSAQRLQVEACVLLALRCCEERVEDRPKMIQVAKELKR 347

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079959 AT3G52530 [Arabidopsis thaliana (taxid:3702)]

 Score = 175 (66.7 bits), Expect = 5.5e-18, Sum P(2) = 5.5e-18
 Identities = 41/93 (44%), Positives = 57/93 (61%)

Query:     2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPI 60
             +IANA+AYLH  FPR I+ ++++  +I  DED  AKL  F L  SIP+GE+ +  D +  
Sbjct:   155 DIANAVAYLHTAFPRVIINRDVRPQNIFLDEDGTAKLSSFCLRISIPEGESSVYDDKVVY 214

Query:    61 GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLL 93
             G+   V  EY  TG  +EK DV+SF     +LL
Sbjct:   215 GVS--VDPEYNGTGLVSEKFDVYSFGVTMLFLL 245

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2066133 AT2G28960 [Arabidopsis thaliana (taxid:3702)]

 Score = 217 (81.4 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 61/175 (34%), Positives = 87/175 (49%)

Query:     1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP-DGETHIKDAIP 59
             +E A  L YLH G   P+V +++K ++IL DE   AKL DF L+ S P  GETH+  A+ 
Sbjct:   677 VETAQGLEYLHTGCKPPMVHRDVKTTNILLDEHFQAKLADFGLSRSFPVGGETHVSTAVA 736

Query:    60 IGIMGFVATEYVTTGDYNEKCDVFSFA-------GDRHWLLN-RVKKHIEC--------N 103
              G  G++  EY  T   NEK DV+SF          R  +   R K HI           
Sbjct:   737 -GTPGYLDPEYYRTNRLNEKSDVYSFGIVLLEIITSRPVIQQTREKPHIAAWVGYMLTKG 795

Query:   104 TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
               + +VDP +  +       +   V   +E+A+ CV+ S+E RPTM  V  +L+Q
Sbjct:   796 DIENVVDPRLNRDY------EPTSVWKALEIAMSCVNPSSEKRPTMSQVTNELKQ 844

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010043 "response to zinc ion" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2147805 AT5G15080 [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 7.0e-16, P = 7.0e-16
 Identities = 57/174 (32%), Positives = 89/174 (51%)

Query:     4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
             A  L++LH    +P+++++ K S+IL D D+ AKL DF LA+  PD G+TH+   + +G 
Sbjct:   257 AKGLSFLHEEALKPVIYRDFKTSNILLDADYNAKLSDFGLAKDAPDEGKTHVSTRV-MGT 315

Query:    63 MGFVATEYVTTGDYNEKCDVFSFA--------GDR----------HWLLNRVKKHI-ECN 103
              G+ A EYV TG    K DV+SF         G R          H L+   + H+ +  
Sbjct:   316 YGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLLDKR 375

Query:   104 TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR 157
              F  ++DP +     I+ ++K  Q      LA +C+S   + RP M DV + L+
Sbjct:   376 RFYRLLDPRLEGHFSIKGAQKVTQ------LAAQCLSRDPKIRPKMSDVVEALK 423

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	163
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-08
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	4e-08
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-07
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-07
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	5e-07
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	5e-07
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	1e-06
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-06
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	6e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-05
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	7e-05
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	9e-05
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	9e-05
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	1e-04
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	3e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-04
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	4e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	4e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	5e-04
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	5e-04
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	6e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	6e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	8e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	8e-04
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	9e-04
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	0.002
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	0.002
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	0.002
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	0.002
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	0.002
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.002
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.002
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	0.002
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.002
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	0.003
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	0.003
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	0.003
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	0.003
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	0.004
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	0.004
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 51.9 bits (125), Expect = 1e-08
 Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIP 59
           ++I   L YLH      I+ +++K  +IL D D    KL DF L++ +   ++ +K  + 
Sbjct: 99  LQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIV- 154

Query: 60  IGIMGFVATE-YVTTGDYNEKCDVFSFA 86
            G   ++A E  +  G Y+EK D++S  
Sbjct: 155 -GTPAYMAPEVLLGKGYYSEKSDIWSLG 181

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD---A 57
           ++IA  + YL     +  V +++   + L  ED V K+ DF L+  + D + + K     
Sbjct: 112 IQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGK 168

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           +PI  M   A E +  G +  K DV+SF
Sbjct: 169 LPIRWM---APESLKDGIFTSKSDVWSF 193

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 50.6 bits (122), Expect = 4e-08
 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 6/84 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I +AL YLH    + IV +++K  +IL DED   KL DF LA  +  GE        +G
Sbjct: 105 QILSALEYLH---SKGIVHRDLKPENILLDEDGHVKLADFGLARQLDPGEKLTT---FVG 158

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
              ++A E +    Y +  D++S 
Sbjct: 159 TPEYMAPEVLLGKGYGKAVDIWSL 182

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 24/85 (28%), Positives = 41/85 (48%), Gaps = 8/85 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--IPI 60
           IA  + YL     +  + +++   + L  E+ V K+ DF L+  + D + + K    +PI
Sbjct: 111 IARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPI 167

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF 85
             M   A E +  G +  K DV+SF
Sbjct: 168 RWM---APESLKEGKFTSKSDVWSF 189

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   LAYLH      IV ++IK ++IL D D V KL DF  A+ + D ET        G
Sbjct: 109 QILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRG 165

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
              ++A E +   +Y    D++S 
Sbjct: 166 TPYWMAPEVIRGEEYGRAADIWSL 189

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 47.5 bits (114), Expect = 5e-07
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           EI  AL YLH +G    I+++++K  +IL D D   KL DF LA+ +    +        
Sbjct: 101 EIVLALEYLHSLG----IIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNT--FC 154

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF 85
           G   ++A E +    Y +  D +S 
Sbjct: 155 GTPEYLAPEVLLGKGYGKAVDWWSL 179

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 47.8 bits (112), Expect = 5e-07
 Identities = 35/171 (20%), Positives = 69/171 (40%), Gaps = 19/171 (11%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIP 59
            +I +AL YLH    + I+ ++IK  +IL D D  V KL DF LA+ +PD  +       
Sbjct: 108 AQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPAL 164

Query: 60  ----IGIMGFVATEYVT---TGDYNEKCDVFSFAGDRHWLLN---RVKKHIECNTFDEIV 109
               +G  G++A E +        +   D++S     + LL      +     +   + +
Sbjct: 165 PSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTL 224

Query: 110 DPVIREELC-----IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ 155
             ++          +  S  +   +A  +L  K +++  ++R +       
Sbjct: 225 KIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275

Length = 384

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 37/169 (21%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--IPI 60
           IA  + YL     +  + +++   + L  E+ V K+ DF L+  + D + +      +PI
Sbjct: 112 IARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGKLPI 168

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA---------GDRHWLLNRVKKHIECNTFDEIVDP 111
             M   A E +  G +  K DV+SF          G+  +                + + 
Sbjct: 169 RWM---APESLKEGKFTSKSDVWSFGVLLWEIFTLGEEPY--------------PGMSNA 211

Query: 112 VIREELCIQSSEKDKQ----VQAFVELAVKCVSESAEDRPTMIDVAKQL 156
            + E   ++   +  +         +L ++C +E  EDRPT  ++ + L
Sbjct: 212 EVLE--YLKKGYRLPKPPNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+   L YLH      I+ ++IK ++IL   D   KL DF L+  + D +        +G
Sbjct: 106 ELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNT---MVG 159

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
              ++A E +    Y+ K D++S  
Sbjct: 160 TPYWMAPEVINGKPYDYKADIWSLG 184

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 44.2 bits (105), Expect = 6e-06
 Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI  AL YLH    + I+ ++IK  +IL DE     + DF++A  +         +   G
Sbjct: 108 EIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTS---G 161

Query: 62  IMGFVATEYVTTGDYNEKCDVFS 84
             G++A E +    Y+   D +S
Sbjct: 162 TPGYMAPEVLCRQGYSVAVDWWS 184

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.7 bits (103), Expect = 1e-05
 Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 21/154 (13%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     +  + ++++ ++IL  E    K+ DF LA  I D E   ++     
Sbjct: 110 QIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL       E  T+  I  P +     IQ+
Sbjct: 167 IK-WTAPEAINYGTFTIKSDVWSFG----ILLT------EIVTYGRIPYPGMTNPEVIQN 215

Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   EL   C  E  E+RPT
Sbjct: 216 LERGYRMPRPDNCPEELYELMRLCWKEKPEERPT 249

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 21/154 (13%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL     V K+ DF LA  I D E   ++     
Sbjct: 110 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL       E  T+  I  P +     I++
Sbjct: 167 IK-WTAPEAINFGSFTIKSDVWSFG----ILLM------EIVTYGRIPYPGMSNPEVIRA 215

Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       +   +    + ++C     E+RPT
Sbjct: 216 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 249

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 10/149 (6%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           I  AL YL       ++ +++K S+IL D     KL DF ++  + D +   + A   G 
Sbjct: 123 IVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSA---GC 177

Query: 63  MGFVATEYVT----TGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC 118
             ++A E +        Y+ + DV+S       L      +  C T  E++  +++EE  
Sbjct: 178 AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP 237

Query: 119 IQSSEKDKQVQAFVELAVKCVSESAEDRP 147
                +      F      C+++    RP
Sbjct: 238 SLPPNEGFS-PDFCSFVDLCLTKDHRKRP 265

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 41.1 bits (96), Expect = 9e-05
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 7/81 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 103 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 156

Query: 61  GIMGFVATEYVTTGDYNEKCD 81
           G   ++A E +   DY    D
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVD 177

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 41.2 bits (96), Expect = 9e-05
 Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 103 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCD 81
           G   ++A E +   DY    D
Sbjct: 158 GTPEYLAPEVLEDNDYGRAVD 178

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGET 52
           EI +AL YLH      +V++++KL +++ D+D   K+ DF L  E I DG T
Sbjct: 103 EIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT 151

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 5/78 (6%)

Query: 7   LAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFV 66
           L YLH       + ++IK  +IL +E+  AKL DF ++  + D  T  K    IG   ++
Sbjct: 112 LEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTD--TMAKRNTVIGTPFWM 166

Query: 67  ATEYVTTGDYNEKCDVFS 84
           A E +    YN K D++S
Sbjct: 167 APEVIQEIGYNNKADIWS 184

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 22/93 (23%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE--SIPDGETHIKDAIP 59
           +I   L YLH      I+ +++K  +IL DE+ V K+ DF LA+                
Sbjct: 106 QILRGLEYLHS---NGIIHRDLKPENILLDENGVVKIADFGLAKKLLKSSSSLT------ 156

Query: 60  IGIMGFVAT-EYV------TTGDYNEKCDVFSF 85
                FV T  Y+          Y  K DV+S 
Sbjct: 157 ----TFVGTPWYMAPEVLLGGNGYGPKVDVWSL 185

Length = 260

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 39.7 bits (92), Expect = 3e-04
 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI +AL YLH G    IV++++KL +++ D+D   K+ DF L  E I D  T        
Sbjct: 103 EIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATM---KTFC 156

Query: 61  GIMGFVATEYVTTGDYNEKCD 81
           G   ++A E +   DY    D
Sbjct: 157 GTPEYLAPEVLEDNDYGRAVD 177

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 6/83 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   L +LH    R IV++++K  ++L D+    ++ D  LA  +  G+  IK     G
Sbjct: 103 QIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKK-IKGR--AG 156

Query: 62  IMGFVATEYVTTGDYNEKCDVFS 84
             G++A E +    Y+   D F+
Sbjct: 157 TPGYMAPEVLQGEVYDFSVDWFA 179

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 39.0 bits (92), Expect = 4e-04
 Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 9/88 (10%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--- 57
           ++IA  + YL     +  V +++   + L  E+ V K+ DF L+  I + + + K     
Sbjct: 109 LQIAKGMEYLE---SKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGGK 165

Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           +PI  M   A E +  G +  K DV+SF
Sbjct: 166 LPIKWM---APESLKDGKFTSKSDVWSF 190

Length = 258

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 16/91 (17%)

Query: 2   EIANALAYLHVG-FPRPIVF-KNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++  AL   H    P   V  +++K ++I  D ++  KL DF LA+ +    +  K    
Sbjct: 113 QLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAKT--- 169

Query: 60  IGIMGFVATEY------VTTGDYNEKCDVFS 84
                +V T Y      +    Y+EK D++S
Sbjct: 170 -----YVGTPYYMSPEQLNHMSYDEKSDIWS 195

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 38.7 bits (90), Expect = 5e-04
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 5/84 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D D   ++ D  LA  + DG++  K     G
Sbjct: 105 QIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY--AG 159

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
             GF+A E +   +Y+   D F+ 
Sbjct: 160 TPGFMAPELLQGEEYDFSVDYFAL 183

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 38.9 bits (90), Expect = 5e-04
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 109 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
              ++A E +    Y+ K D++S  
Sbjct: 164 TPFWMAPEVIQQSAYDSKADIWSLG 188

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 19/88 (21%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +   L+YLH    R I+ ++IK S+IL       KL DF ++     GE      +    
Sbjct: 114 VLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVS-----GE-----LVNSLA 160

Query: 63  MGFVATEY------VTTGDYNEKCDVFS 84
             F  T +      +    Y+   DV+S
Sbjct: 161 GTFTGTSFYMAPERIQGKPYSITSDVWS 188

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 109 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
              ++A E +    Y+ K D++S  
Sbjct: 164 TPFWMAPEVIKQSAYDSKADIWSLG 188

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 110 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 167 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 225

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 226 PECPESLH---DLMCQCWRKEPEERPT 249

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 38.5 bits (89), Expect = 8e-04
 Identities = 39/154 (25%), Positives = 62/154 (40%), Gaps = 15/154 (9%)

Query: 6   ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGF 65
            LAYLH      ++ ++IK  +IL  E    KL DF  A       +       +G   +
Sbjct: 137 GLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSF------VGTPYW 187

Query: 66  VATEYVTT---GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS 122
           +A E +     G Y+ K DV+S       L  R       N    +      E   +QS+
Sbjct: 188 MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSN 247

Query: 123 EKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
           E     + FV+    C+ +  +DRPT  ++ K +
Sbjct: 248 EWSDYFRNFVD---SCLQKIPQDRPTSEELLKHM 278

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 38.1 bits (89), Expect = 8e-04
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           EI   L +LH    R I+++++KL ++L D +   K+ DF +  E I  G T    +   
Sbjct: 104 EIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVT---TSTFC 157

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF 85
           G   ++A E ++   Y    D ++ 
Sbjct: 158 GTPDYIAPEILSYQPYGPAVDWWAL 182

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 38.2 bits (89), Expect = 9e-04
 Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + I+++++KL ++L D+D   K+ DF + +   +GE   K +   G
Sbjct: 104 EIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG--KASTFCG 158

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
              ++A E +    YNE  D +SF
Sbjct: 159 TPDYIAPEILKGQKYNESVDWWSF 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 6/75 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L  LH      IV++++K  +IL D+    ++ D  LA  +P+G+T IK    +G
Sbjct: 110 EICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGR--VG 163

Query: 62  IMGFVATEYVTTGDY 76
            +G++A E V    Y
Sbjct: 164 TVGYMAPEVVKNERY 178

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 29/156 (18%), Positives = 66/156 (42%), Gaps = 9/156 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I +A++Y+H      I+ ++IK  +I   +  + KL DF +++ +    +  +  +  G
Sbjct: 109 QIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVV--G 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              +++ E      YN K D+++     + LL  +K+  +      +V  +++      +
Sbjct: 164 TPYYMSPELCQGVKYNFKSDIWALGCVLYELLT-LKRTFDATNPLNLVVKIVQ---GNYT 219

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR 157
                     + L    + +  E RPT  +V  Q  
Sbjct: 220 PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++   + YL     +  V +++   ++L  ED VAK+ DF LA+    G+   K  +P+
Sbjct: 109 LDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK--LPV 163

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF 85
               + A E +    ++ K DV+SF
Sbjct: 164 ---KWTAPEALREKKFSTKSDVWSF 185

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 5/83 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   LAYLH    + ++ ++IK ++IL  +D V KL DF +A  + D      DA  +G
Sbjct: 107 QVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLND--VSKDDASVVG 161

Query: 62  IMGFVATEYVTTGDYNEKCDVFS 84
              ++A E +     +   D++S
Sbjct: 162 TPYWMAPEVIEMSGASTASDIWS 184

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 37.2 bits (87), Expect = 0.002
 Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 11/69 (15%)

Query: 5   NALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMG 64
            AL Y+H G    ++ +++K S+IL + D   KL DF LA S+    + +++     ++ 
Sbjct: 118 KALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSL----SELEENPENPVL- 169

Query: 65  FVATEYVTT 73
              T+YV T
Sbjct: 170 ---TDYVAT 175

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 109 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVG 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
              ++A E +    Y+ K D++S  
Sbjct: 164 TPFWMAPEVIKQSAYDFKADIWSLG 188

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 22/89 (24%), Positives = 39/89 (43%), Gaps = 10/89 (11%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA--- 57
           ++IAN + YL     +  + +++   +IL   D   K+ DF L  ++P  E H       
Sbjct: 104 VQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHL 160

Query: 58  -IPIGIMGFVATEYVTTGDYNEKCDVFSF 85
            +P       A E + T  ++   DV+ F
Sbjct: 161 KVPFAWC---APESLRTRTFSHASDVWMF 186

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 37.0 bits (86), Expect = 0.002
 Identities = 41/159 (25%), Positives = 65/159 (40%), Gaps = 14/159 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA---I 58
           +IA  ++YL     + +V +++   ++L       K+ DF LA+ +   E         +
Sbjct: 117 QIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKV 173

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHW-LLNRVKKHIECNTFDEIVDPVIREEL 117
           PI  M   A E +    Y  K DV+S+ G   W L+    K  E     EI D + + E 
Sbjct: 174 PIKWM---ALESILHRIYTHKSDVWSY-GVTVWELMTFGAKPYEGIPAVEIPDLLEKGER 229

Query: 118 CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
             Q       V     + VKC    AE RPT  ++  + 
Sbjct: 230 LPQPPICTIDVYM---VLVKCWMIDAESRPTFKELINEF 265

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 36.6 bits (85), Expect = 0.002
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA-IPI 60
           ++A  +AYL     +  + +++   +IL  ED V K+ DF LA  I +      D  IP 
Sbjct: 112 QVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPY 168

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF 85
               + A E  + G ++ K DV+SF
Sbjct: 169 ---KWTAPEAASHGTFSTKSDVWSF 190

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 36/154 (23%), Positives = 68/154 (44%), Gaps = 21/154 (13%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +AY+     +  + ++++ +++L  E  + K+ DF LA  I D E   ++     
Sbjct: 111 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFP 167

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL       E  T+ +I  P +     + +
Sbjct: 168 IK-WTAPEAINFGSFTIKSDVWSFG----ILL------YEIVTYGKIPYPGMSNSDVMSA 216

Query: 122 SEKDKQV-------QAFVELAVKCVSESAEDRPT 148
            ++  ++           ++   C  E AE+RPT
Sbjct: 217 LQRGYRMPRMENCPDELYDIMKTCWKEKAEERPT 250

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 8/86 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--THIKDAIP 59
           +IA  +AYL     R  + +++   +IL  E+ V K+ DF LA  I D E         P
Sbjct: 111 QIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFP 167

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSF 85
           I    + A E    G +  K DV+SF
Sbjct: 168 I---KWTAPEAANYGRFTIKSDVWSF 190

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 15/72 (20%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++  A+AY H      I+ ++IK  +IL  E  V KL DF  A ++              
Sbjct: 108 QLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPAS-------- 156

Query: 62  IMGFVATEYVTT 73
                 T+YV T
Sbjct: 157 ----PLTDYVAT 164

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 29  LFDEDHVAKLFDFSLAESIPDGETHIKDA---IPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           L  E++V K+ DF ++     G   + D    IPI    + A E +  G Y  + DV+S+
Sbjct: 125 LVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIK---WTAPEALNYGRYTSESDVWSY 181

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 36.1 bits (84), Expect = 0.004
 Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 15/92 (16%)

Query: 2   EIANALAYLH-VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE--------SIPDGET 52
           EI  AL YLH  G    I+ +++K  +IL D +   KL DF L++        ++ D E 
Sbjct: 101 EIVLALEYLHSNG----IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156

Query: 53  HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS 84
             K    +G   ++A E +    +++  D +S
Sbjct: 157 EDKRI--VGTPDYIAPEVILGQGHSKTVDWWS 186

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 8/85 (9%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A  + YL     + +V +++   +IL  ED VAK+ DF LA     G  + K  +P+
Sbjct: 107 LDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSK--LPV 161

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF 85
               + A E +    ++ K DV+S+
Sbjct: 162 ---KWTAPEALKHKKFSSKSDVWSY 183

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + IV++++KL +IL D D   K+ DF + +    G+   K     G
Sbjct: 104 EIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KTCTFCG 158

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
              ++A E +    YN   D +SF
Sbjct: 159 TPDYIAPEILLGQKYNTSVDWWSF 182

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	163
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.98
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.98
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.98
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.98
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.98
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.98
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.98
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.98
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.98
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.98
PHA02882	294	putative serine/threonine kinase; Provisional	99.98
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.98
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.98
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.98
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.98
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.97
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.97
KOG0589	426	consensus Serine/threonine protein kinase [General	99.97
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
PTZ00283	496	serine/threonine protein kinase; Provisional	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
PHA03212	391	serine/threonine kinase US3; Provisional	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.97
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.97
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.97
PTZ00267	478	NIMA-related protein kinase; Provisional	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.97
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.97
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.97
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.97
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.97
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.97
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.97
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
PHA03211	461	serine/threonine kinase US3; Provisional	99.97
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
PTZ00284	467	protein kinase; Provisional	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.97
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.96
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.96
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.96
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.96
PHA03210	501	serine/threonine kinase US3; Provisional	99.96
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.96
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.96
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.96
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.96
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.96
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.96
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.96
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.96
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.96
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.96
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.96
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.96
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
KOG0605	550	consensus NDR and related serine/threonine kinases	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.96
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.96
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.96
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.96
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.96
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.96
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.96
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.96
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.96
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.96
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.96
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.96
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.96
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.96
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.96
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.96
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.96
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.96
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.96
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.96
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.96
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.96
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.96
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.96
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.95
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.95
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.95
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.95
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.95
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.95
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.95
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.95
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.95
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.95
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.95
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.95
PLN00181	793	protein SPA1-RELATED; Provisional	99.95
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.95
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.95
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.95
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.95
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.95
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.95
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.95
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.95
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.95
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.95
KOG0584	632	consensus Serine/threonine protein kinase [General	99.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.95
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.95
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.95
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.95
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.95
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.95
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.95
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.95
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.95
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.95
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.95
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.95
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.95
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.95
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.94
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.94
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.94
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.94
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.94
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.94
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.94
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.94
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.94
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.94
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.94
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.94
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.94
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.94
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.94
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.94
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.94
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.94
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.94
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.94
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.94
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.94
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.93
KOG0610	459	consensus Putative serine/threonine protein kinase	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.93
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.93
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.93
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.93
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.93
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.93
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.93
KOG0586	596	consensus Serine/threonine protein kinase [General	99.93
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.93
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.92
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.92
KOG3653	534	consensus Transforming growth factor beta/activin	99.92
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.92
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.92
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.92
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.92
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.91
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.9
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.9
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.89
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.89
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.89
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.88
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.88
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.87
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.86
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.86
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.82
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.82
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.79
KOG1152	772	consensus Signal transduction serine/threonine kin	99.77
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.75
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.74
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.74
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.73
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.73
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.73
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.69
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.69
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.69
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.62
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.56
PRK09188	365	serine/threonine protein kinase; Provisional	99.52
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.5
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.47
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.42
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.4
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.39
PRK12274	218	serine/threonine protein kinase; Provisional	99.35
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.35
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.23
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.19
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.03
smart00090	237	RIO RIO-like kinase.	99.0
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.0
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.0
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.99
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.88
PRK10345	210	hypothetical protein; Provisional	98.84
COG4248	637	Uncharacterized protein with protein kinase and he	98.83
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.79
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.79
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.77
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.76
PRK14879	211	serine/threonine protein kinase; Provisional	98.73
KOG1243	690	consensus Protein kinase [General function predict	98.73
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.57
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.4
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.37
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.15
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.03
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.96
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.94
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.89
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.88
KOG3087	229	consensus Serine/threonine protein kinase [General	97.71
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.59
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.56
PRK09902	216	hypothetical protein; Provisional	97.09
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.73
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	96.7
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.45
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	96.35
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	96.34
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.04
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	96.02
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	95.99
PRK05231	319	homoserine kinase; Provisional	95.94
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	95.61
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	95.56
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.52
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	95.51
PF01636	239	APH: Phosphotransferase enzyme family This family	95.4
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	95.39
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	95.33
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	95.27
PRK10271	188	thiK thiamine kinase; Provisional	95.15
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	94.96
COG0661	517	AarF Predicted unusual protein kinase [General fun	94.92
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	94.63
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	94.61
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.46
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	94.28
COG2334	331	Putative homoserine kinase type II (protein kinase	94.04
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	93.93
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	93.83
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	93.59
PLN02236	344	choline kinase	93.54
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.45
PHA03111	444	Ser/Thr kinase; Provisional	92.61
PRK06148	1013	hypothetical protein; Provisional	92.23
PRK09550	401	mtnK methylthioribose kinase; Reviewed	91.94
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	91.47
PRK11768	325	serine/threonine protein kinase; Provisional	91.3
KOG2268	465	consensus Serine/threonine protein kinase [Signal	91.24
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	91.03
KOG1093	725	consensus Predicted protein kinase (contains TBC a	90.98
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	90.79
KOG1235	538	consensus Predicted unusual protein kinase [Genera	90.21
PRK12396	409	5-methylribose kinase; Reviewed	89.73
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	89.14
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	89.08
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	88.86
PRK06149	972	hypothetical protein; Provisional	88.56
PLN02756	418	S-methyl-5-thioribose kinase	87.75
PLN02876	822	acyl-CoA dehydrogenase	85.76

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-40  Score=229.10  Aligned_cols=145  Identities=19%  Similarity=0.290  Sum_probs=123.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +|++||.|||.  .++||||||||+|+|++..|.+||+|||.+..+.+.    ...++.||..|||||-+.+..|+.++|
T Consensus       186 ~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sD  259 (364)
T KOG0581|consen  186 AVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSD  259 (364)
T ss_pred             HHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----hcccccccccccChhhhcCCcCCcccc
Confidence            68999999994  489999999999999999999999999999887665    223668999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccc----cchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIEC----NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||||++++|+..|..|+...    ..+-+++..+..+.. +..+.. .+++++++|+..||++||.+|||+.++++
T Consensus       260 IWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~pp-P~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  260 IWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPP-PRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             eecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCC-CCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999988763    345566676666542 222222 58899999999999999999999999986

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-38  Score=225.38  Aligned_cols=153  Identities=22%  Similarity=0.326  Sum_probs=125.9

Q ss_pred             ChHHHHHHHHhcCCCCC-eEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcccccCccccccccCccccc--cCCC
Q 043958            1 MEIANALAYLHVGFPRP-IVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT--TGDY   76 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~-~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~--~~~~   76 (163)
                      +||+.||.|||   +.+ |||||+||+|+|++.++ .+||+|||+++........  .....||+.|||||.+.  ...|
T Consensus       149 ldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~--~~~~~GT~~wMAPEv~~~~~~~~  223 (362)
T KOG0192|consen  149 LDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTS--MTSVAGTYRWMAPEVLRGEKSPY  223 (362)
T ss_pred             HHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccccc--ccCCCCCccccChhhhcCCCCcC
Confidence            48999999999   788 99999999999999998 9999999999777654311  11246999999999999  5689


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +.|+||||||+++||++++..||..... ..+...+.....++..+  ..+++.+..++..||+.||+.||++.+++..|
T Consensus       224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p--~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l  300 (362)
T KOG0192|consen  224 TEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPIP--KECPPHLSSLMERCWLVDPSRRPSFLEIVSRL  300 (362)
T ss_pred             CccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCCC--ccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHH
Confidence            9999999999999999999999876655 44444444444333222  23788999999999999999999999999999


Q ss_pred             HHHhh
Q 043958          157 RQAYR  161 (163)
Q Consensus       157 ~~~~~  161 (163)
                      +.+..
T Consensus       301 ~~~~~  305 (362)
T KOG0192|consen  301 ESIMS  305 (362)
T ss_pred             HHHHH
Confidence            98764

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.4e-38  Score=228.19  Aligned_cols=154  Identities=26%  Similarity=0.352  Sum_probs=133.0

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      .|||+|++||+   ++++|||||-+.|||++.+..+||+|||+++...++...... ...-...|+|||.+..+.|+.|+
T Consensus       310 ~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~-~~kfPIkWtAPEa~~~~~FS~kS  385 (468)
T KOG0197|consen  310 AQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASE-GGKFPIKWTAPEALNYGKFSSKS  385 (468)
T ss_pred             HHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCceeecC-CCCCCceecCHHHHhhCCccccc
Confidence            48999999999   999999999999999999999999999999955444433222 22345589999999999999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||+++||+++....++......+++..+..+   .+.+.+..|+..+.+++..||+.+|++||||+.+...|+++.
T Consensus       386 DVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~G---yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  386 DVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERG---YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             ceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhcc---CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence            99999999999999988887777888888877666   456667779999999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       463 ~  463 (468)
T KOG0197|consen  463 T  463 (468)
T ss_pred             h
Confidence            4

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-37  Score=225.86  Aligned_cols=146  Identities=21%  Similarity=0.320  Sum_probs=130.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +++.||+|||   .++|+|||||.+|||++.+|.+||.|||++..+.....+..  +.+||++|||||.+....|..|.|
T Consensus       377 e~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~--TmVGTPYWMAPEVvtrk~YG~KVD  451 (550)
T KOG0578|consen  377 EILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRS--TMVGTPYWMAPEVVTRKPYGPKVD  451 (550)
T ss_pred             HHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccc--cccCCCCccchhhhhhcccCcccc
Confidence            5789999999   99999999999999999999999999999988877665443  457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||||++.+||+.|..||+.+.++..+......+.  +........++.+++|+.+||..|+++|+++.++|+
T Consensus       452 IWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~--P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  452 IWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT--PKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             chhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCC--CCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            99999999999999999998888887666555554  455566678999999999999999999999999987

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.8e-37  Score=209.37  Aligned_cols=152  Identities=17%  Similarity=0.253  Sum_probs=126.1

Q ss_pred             ChHHHHHHHHhcCCCCC--eEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            1 MEIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~--~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      +|++.||..+|... .+  ++||||||.||+++.+|.+|++|||+++......+..  .+.+||+.||+||.+.+.+|+.
T Consensus       131 ~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~tfA--~S~VGTPyYMSPE~i~~~~Y~~  207 (375)
T KOG0591|consen  131 VQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTTFA--HSLVGTPYYMSPERIHESGYNF  207 (375)
T ss_pred             HHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhHhcchhHHH--HhhcCCCcccCHHHHhcCCCCc
Confidence            48999999999321 55  9999999999999999999999999998876554333  3568999999999999999999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      |+||||+||+++||+...+||... +..++..++..+++.+  ......+..+..+|..|+..||+.||+...++..+..
T Consensus       208 kSDiWslGCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~--~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~  284 (375)
T KOG0591|consen  208 KSDIWSLGCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPP--LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS  284 (375)
T ss_pred             chhHHHHHHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCC--CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence            999999999999999998887644 7778888888876432  2335678999999999999999999985555554443

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.2e-36  Score=214.04  Aligned_cols=147  Identities=22%  Similarity=0.325  Sum_probs=126.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC---CCeEECccccccccCCCCCcccccCccccccccCccccccCC---
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD---   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~---   75 (163)
                      |++.|+.|||   +.||+||||||+|||++.+   ..+||+|||+|+......-.   .+.-||+.|.|||.+.++.   
T Consensus       284 Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm---~TlCGTpsYvAPEVl~~kg~~~  357 (475)
T KOG0615|consen  284 QLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFM---KTLCGTPSYVAPEVLASKGVEY  357 (475)
T ss_pred             HHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccchhhccccceeh---hhhcCCccccChhheecCCeec
Confidence            8999999999   9999999999999999766   77899999999887643322   2456999999999998765   


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +..+.|+||+||++|-+++|..||........+.+++..+.+.+....+...+++.+++|.+||..||++|||++|+++
T Consensus       358 ~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  358 YPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            3347899999999999999987776554444477888899998888899999999999999999999999999999987

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.5e-36  Score=218.57  Aligned_cols=143  Identities=22%  Similarity=0.324  Sum_probs=125.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+|+|||||..|++++++.++||+|||+|...........  +.-||+-|+|||++.....+..+|
T Consensus       126 QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~--TlCGTPNYIAPEVl~k~gHsfEvD  200 (592)
T KOG0575|consen  126 QIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKK--TLCGTPNYIAPEVLNKSGHSFEVD  200 (592)
T ss_pred             HHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCcccccc--eecCCCcccChhHhccCCCCCchh
Confidence            8999999999   99999999999999999999999999999988775533332  346999999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++|.|+.|.+|| ......+.+..+....+..+.    ..+.++++||.++|+.+|.+|||+++++.
T Consensus       201 iWSlGcvmYtLL~G~PPF-etk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  201 IWSLGCVMYTLLVGRPPF-ETKTVKETYNKIKLNEYSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             hhhhhhHHHhhhhCCCCc-ccchHHHHHHHHHhcCccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999997765 466788888888888765533    56689999999999999999999999986

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=2.4e-35  Score=212.07  Aligned_cols=154  Identities=17%  Similarity=0.316  Sum_probs=117.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||.||+++.++.++++|||+++...............++..|+|||.+.+..++.++|
T Consensus       182 qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  258 (338)
T cd05102         182 QVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSD  258 (338)
T ss_pred             HHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccC
Confidence            8999999999   8999999999999999999999999999997654333222222334567899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+............ .......  ......++.+.+++.+||+.||++|||+.++++.|+++.
T Consensus       259 iwslG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         259 VWSFGVLLWEIFSLGASPYPGVQINEEFCQR-LKDGTRM--RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCccHHHHHH-HhcCCCC--CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999997 65555432222222221 1111111  112345678999999999999999999999999999987


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       336 ~  336 (338)
T cd05102         336 Q  336 (338)
T ss_pred             h
Confidence            5

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-35  Score=208.66  Aligned_cols=150  Identities=23%  Similarity=0.355  Sum_probs=122.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccc--cCccccccccCcccccc--CCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD--AIPIGIMGFVATEYVTT--GDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~--~~~~~~~~~~~PE~~~~--~~~~   77 (163)
                      ++++||.|||   .+|.||||+|+.|||++.+|.++|+|||++..+...+.....  .+..|+++|||||.+..  ..|+
T Consensus       134 e~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYd  210 (516)
T KOG0582|consen  134 EVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYD  210 (516)
T ss_pred             HHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCcc
Confidence            5789999999   999999999999999999999999999998766655433221  46689999999999643  3599


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhh-----cccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL-----CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                      .|+||||||++..|+.+|..||....+.+.++.......+     .+........+.+++.++..||.+||++|||++++
T Consensus       211 fKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskL  290 (516)
T KOG0582|consen  211 FKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKL  290 (516)
T ss_pred             chhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHH
Confidence            9999999999999999999998766666665555433332     22344455667899999999999999999999999


Q ss_pred             HH
Q 043958          153 AK  154 (163)
Q Consensus       153 ~~  154 (163)
                      ++
T Consensus       291 lk  292 (516)
T KOG0582|consen  291 LK  292 (516)
T ss_pred             hc
Confidence            86

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-35  Score=204.95  Aligned_cols=149  Identities=25%  Similarity=0.333  Sum_probs=113.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCc-ccccCccccccccCccccccCC-CCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGD-YNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~-~~~   78 (163)
                      ||++||+|||   +++++|+||||+|||++. ++.+||+|||++......... .......||+.|||||.+.++. ...
T Consensus       125 ~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~  201 (313)
T KOG0198|consen  125 QILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARR  201 (313)
T ss_pred             HHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCc
Confidence            7899999999   999999999999999999 799999999999776641111 2223567999999999998643 334


Q ss_pred             ccceeecchhhHHHhhhccccccc-cchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIEC-NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      ++||||+||++.||+++..|+... .....++.. ......+  ..+...+.+.++|+.+|+..+|+.|||+.+++..-
T Consensus       202 ~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~i-g~~~~~P--~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp  277 (313)
T KOG0198|consen  202 ESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLI-GREDSLP--EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP  277 (313)
T ss_pred             cchhhhcCCEEEeccCCCCcchhhcchHHHHHHH-hccCCCC--CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence            899999999999999996665532 222222222 2222112  23334778999999999999999999999998743

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-35  Score=211.90  Aligned_cols=145  Identities=20%  Similarity=0.260  Sum_probs=121.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-----------ccccCccccccccCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-----------IKDAIPIGIMGFVATEY   70 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~~PE~   70 (163)
                      ||++||+|||   +.|||||||||+|||++.+|.++|.|||.++.++.....           .....++||..|.+||.
T Consensus       182 eIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPEl  258 (604)
T KOG0592|consen  182 EILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPEL  258 (604)
T ss_pred             HHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHH
Confidence            7899999999   999999999999999999999999999999877643221           11135789999999999


Q ss_pred             cccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           71 VTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        71 ~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      +.++..+..+|+|+|||++|+|+.|.+||...+ -.-++++++...+.++    ...++.+.+|+++.|..||.+|+|..
T Consensus       259 L~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-eyliFqkI~~l~y~fp----~~fp~~a~dLv~KLLv~dp~~Rlt~~  333 (604)
T KOG0592|consen  259 LNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-EYLIFQKIQALDYEFP----EGFPEDARDLIKKLLVRDPSDRLTSQ  333 (604)
T ss_pred             hcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-HHHHHHHHHHhcccCC----CCCCHHHHHHHHHHHccCccccccHH
Confidence            999999999999999999999999988876544 3346666666655443    33447899999999999999999998


Q ss_pred             HHHH
Q 043958          151 DVAK  154 (163)
Q Consensus       151 ~i~~  154 (163)
                      +|.+
T Consensus       334 qIk~  337 (604)
T KOG0592|consen  334 QIKA  337 (604)
T ss_pred             HHhh
Confidence            8876

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=9.7e-35  Score=195.83  Aligned_cols=147  Identities=24%  Similarity=0.359  Sum_probs=125.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc---CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~   78 (163)
                      .+++||.||.+  +++++|||+||+|||+|+.|++|++|||++..+.+......   ..|++.||+||-+.-   .+|+.
T Consensus       199 a~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtr---sAGC~~YMaPERidp~~~~kYDi  273 (391)
T KOG0983|consen  199 AIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTR---SAGCAAYMAPERIDPPDKPKYDI  273 (391)
T ss_pred             HHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceeeccccccc---ccCCccccCccccCCCCCCccch
Confidence            46789999997  78999999999999999999999999999988876665543   369999999998863   35899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||||++++|+.+++.||.....-.+++.+++...+ +..+.....++.+++++..||.+|+.+||...++++
T Consensus       274 RaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  274 RADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             hhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            999999999999999999999887776677777776543 444555568899999999999999999999998875

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-34  Score=205.48  Aligned_cols=144  Identities=22%  Similarity=0.325  Sum_probs=120.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +++.||.|||   ..+.+|||||+.||++..+|.+|++|||++..++......  .+.+||++|||||.+.+..|+.|+|
T Consensus       119 e~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr--~tfvGTPfwMAPEVI~~~~Y~~KAD  193 (467)
T KOG0201|consen  119 EVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR--KTFVGTPFWMAPEVIKQSGYDTKAD  193 (467)
T ss_pred             HHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeechhhcc--ccccccccccchhhhccccccchhh
Confidence            5788999999   8999999999999999999999999999998887766554  3678999999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||||++.+||.+|..|+...++...++. +-...+ +  .....++..+++|+..||+++|+.||++.++++
T Consensus       194 IWSLGITaiEla~GePP~s~~hPmrvlfl-Ipk~~P-P--~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  194 IWSLGITAIELAKGEPPHSKLHPMRVLFL-IPKSAP-P--RLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             hhhhhHHHHHHhcCCCCCcccCcceEEEe-ccCCCC-C--ccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            99999999999999888765555443332 222221 2  222267788999999999999999999999987

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.4e-34  Score=197.07  Aligned_cols=148  Identities=17%  Similarity=0.239  Sum_probs=117.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.|+.|+|   ++++|||||||+|||++.+|.+|+||||+|+.....+....  ..+.|.+|.|||.+.+ -+|....
T Consensus       109 Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YT--DYVATRWYRaPELLvGDtqYG~pV  183 (396)
T KOG0593|consen  109 QLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYT--DYVATRWYRAPELLVGDTQYGKPV  183 (396)
T ss_pred             HHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhh--hhhhhhhccChhhhcccCcCCCcc
Confidence            7899999999   99999999999999999999999999999998875433322  4478999999999987 5799999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh------------------hhcc--------cchhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE------------------ELCI--------QSSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~--------~~~~~~~~~~~~~~l  134 (163)
                      |||++||++.||++|...++.....+.+......-                  ...+        .....++.+..+.++
T Consensus       184 DiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~  263 (396)
T KOG0593|consen  184 DIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDL  263 (396)
T ss_pred             cchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHH
Confidence            99999999999999988887777666544221110                  0000        111123455678999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.|++.||.+|++.++++.
T Consensus       264 ~k~cL~~dP~~R~sc~qll~  283 (396)
T KOG0593|consen  264 LKKCLKMDPDDRLSCEQLLH  283 (396)
T ss_pred             HHHHhcCCccccccHHHHhc
Confidence            99999999999999999875

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-34  Score=225.43  Aligned_cols=155  Identities=21%  Similarity=0.306  Sum_probs=132.7

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      +|||+|+.||+   ++++|||||.+.|+|++....+||+|||+|+.+-..........-.-...|||||.+..+.|+.|+
T Consensus       809 ~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskS  885 (1025)
T KOG1095|consen  809 LDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKS  885 (1025)
T ss_pred             HHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhccccccc
Confidence            48999999999   999999999999999999999999999999955444433333223455689999999999999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||+++||+++.+..|+......+++.....+.   +...+..|+..+.++|.+||+.+|++||+|..+++.+..+.
T Consensus       886 DvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg---RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~  962 (1025)
T KOG1095|consen  886 DVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG---RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAIS  962 (1025)
T ss_pred             chhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC---ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhh
Confidence            999999999999999988888888888887666665   44555668899999999999999999999999999888776


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       963 ~  963 (1025)
T KOG1095|consen  963 N  963 (1025)
T ss_pred             h
Confidence            4

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-34  Score=209.72  Aligned_cols=156  Identities=24%  Similarity=0.288  Sum_probs=125.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc---CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~   78 (163)
                      ||++|+.|||   .++|||||+|+.||++.+++.|||.|||++..-..-..........+...|||||++..   .+|+.
T Consensus       496 QiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~  572 (678)
T KOG0193|consen  496 QIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSF  572 (678)
T ss_pred             HHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCc
Confidence            7899999999   99999999999999999999999999999843322121222223457889999999974   46999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcc-cchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI-QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      .+||||||++.|||+++..||. ....+.++-.+-.+-..+ ......+++.++++|+..||..++++||.+.+|+..|+
T Consensus       573 qSDVYaFGiV~YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~  651 (678)
T KOG0193|consen  573 QSDVYAFGIVWYELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE  651 (678)
T ss_pred             ccchhhhhHHHHHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence            9999999999999999999987 555555555544442222 23344578889999999999999999999999999988


Q ss_pred             HHhh
Q 043958          158 QAYR  161 (163)
Q Consensus       158 ~~~~  161 (163)
                      .+..
T Consensus       652 ~l~~  655 (678)
T KOG0193|consen  652 ELLP  655 (678)
T ss_pred             Hhhh
Confidence            8765

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=202.23  Aligned_cols=154  Identities=40%  Similarity=0.632  Sum_probs=119.4

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCC-CCCcccccCccccccccCccccccCCCCcc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      +++|.||+|||..+..+|+||||||+|||+|+++++||+|||+++..+. ....... . .||.+|++||+...+..+.|
T Consensus       181 ~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~~-~-~gt~gY~~PEy~~~g~lt~K  258 (361)
T KOG1187|consen  181 LGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVSTT-V-MGTFGYLAPEYASTGKLTEK  258 (361)
T ss_pred             HHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceeee-c-CCCCccCChhhhccCCcCcc
Confidence            4789999999988777899999999999999999999999999966654 2221111 1 69999999999999999999


Q ss_pred             cceeecchhhHHHhhhcccccccc--c----------------hhhccchhhhhhhcccchhhH-HHHHHHHHHHHhccc
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECN--T----------------FDEIVDPVIREELCIQSSEKD-KQVQAFVELAVKCVS  140 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~--~----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~  140 (163)
                      +||||||+++.|++++..+.....  .                ..+++++.+..     ..... .....+..+..+|++
T Consensus       259 sDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~-----~~~~~~~~~~~~~~~a~~C~~  333 (361)
T KOG1187|consen  259 SDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKE-----GEYPDEKEVKKLAELALRCLR  333 (361)
T ss_pred             cccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccC-----CCCChHHHHHHHHHHHHHHcC
Confidence            999999999999999986544221  0                11122222110     11121 567779999999999


Q ss_pred             cCcCCCCCHHHHHHHHHHHhh
Q 043958          141 ESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus       141 ~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      .+|..||++.++++.|+.+..
T Consensus       334 ~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  334 PDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             cCCCcCcCHHHHHHHHHhhcc
Confidence            999999999999999977653

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=4e-34  Score=215.78  Aligned_cols=154  Identities=19%  Similarity=0.289  Sum_probs=134.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |||.|+.||-   ++.++||||-+.|+|++++..+||+|||+++.+-............-...|||||.+..++|+.++|
T Consensus       611 QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSD  687 (774)
T KOG1026|consen  611 QIAAGMEYLS---SHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESD  687 (774)
T ss_pred             HHHHHHHHHH---hCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhh
Confidence            8999999999   9999999999999999999999999999998776555444433335567899999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||+|+++||+++....|+..-..+++++-+..++.   .+.+.+|+.++.+|+..||+..|++||+|.+|-..|+...+
T Consensus       688 VWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l---L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~  764 (774)
T KOG1026|consen  688 VWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL---LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQ  764 (774)
T ss_pred             hhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc---ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence            999999999999877766667777888887777763   56677899999999999999999999999999999998754

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=1.1e-33  Score=198.65  Aligned_cols=150  Identities=17%  Similarity=0.296  Sum_probs=117.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       132 ~l~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  208 (283)
T cd05048         132 QIAAGMEYLS---SHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESD  208 (283)
T ss_pred             HHHHHHHHHH---hCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhh
Confidence            7899999999   8999999999999999999999999999987654333222222334677899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+.. ....++...+....   .......++.++.+++.+||+.+|.+||++.++++.|+.
T Consensus       209 v~slG~il~el~~~g~~p~~~-~~~~~~~~~i~~~~---~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         209 IWSFGVVLWEIFSYGLQPYYG-FSNQEVIEMIRSRQ---LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCC-CCHHHHHHHHHcCC---cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            9999999999997 6556543 33344443333222   112234567899999999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=4e-34  Score=192.98  Aligned_cols=146  Identities=20%  Similarity=0.287  Sum_probs=129.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc------CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT------GD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~   75 (163)
                      |+.+|+.|||   .++|+|||+||+|||++++.+++++|||++..+..+......   -||++|+|||.+.-      ..
T Consensus       131 qlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrel---CGTPgYLAPEtikC~m~e~~pG  204 (411)
T KOG0599|consen  131 QLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLREL---CGTPGYLAPETIKCSMYENHPG  204 (411)
T ss_pred             HHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHh---cCCCcccChhheeeecccCCCC
Confidence            6789999999   999999999999999999999999999999988877665543   59999999998862      35


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+...|.|+.|++++.++.|-.||++.... -++.-+..+++.+..+++.+.+...++||.+||+.||++|.|++++++
T Consensus       205 Ys~EVD~Wa~GVImyTLLaGcpPFwHRkQm-lMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  205 YSKEVDEWACGVIMYTLLAGCPPFWHRKQM-LMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             ccchhhHHHHHHHHHHHHcCCCchhHHHHH-HHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            888999999999999999998888744332 245567889999999999999999999999999999999999999987

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.4e-33  Score=201.70  Aligned_cols=155  Identities=19%  Similarity=0.310  Sum_probs=118.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||.||+++.++.++|+|||++..+.............++..|+|||.+.+..++.++|
T Consensus       181 qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  257 (337)
T cd05054         181 QVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSD  257 (337)
T ss_pred             HHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999997764433222222334567899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+||+++++++ +..|+... ...+............  ......++++.+++.+||+.+|++||++.++++.|+++.
T Consensus       258 i~SlGv~l~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         258 VWSFGVLLWEIFSLGASPYPGV-QIDEEFCRRLKEGTRM--RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCC-CccHHHHHHHhccCCC--CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999997 66555432 2222222222221111  112235578999999999999999999999999999987


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       335 ~~  336 (337)
T cd05054         335 QE  336 (337)
T ss_pred             hc
Confidence            64

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-34  Score=208.95  Aligned_cols=149  Identities=23%  Similarity=0.336  Sum_probs=123.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +||.|+.|||   .+.|||||+|+-|||++.+..+||+|||-++......+..   .+.||..|||||.+...+.+.|+|
T Consensus       220 ~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkM---SFaGTVaWMAPEvIrnePcsEKVD  293 (904)
T KOG4721|consen  220 GIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKM---SFAGTVAWMAPEVIRNEPCSEKVD  293 (904)
T ss_pred             HhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhh---hhhhhHhhhCHHHhhcCCcccccc
Confidence            7899999999   8999999999999999999999999999987776554333   457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |||||+++|||+++.-||..-. ...++..+-.+  .+..+.+..|+.-|+=|+++||+..|..||+|++++..|+..
T Consensus       294 IwSfGVVLWEmLT~EiPYkdVd-ssAIIwGVGsN--sL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  294 IWSFGVVLWEMLTGEIPYKDVD-SSAIIWGVGSN--SLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             eehhHHHHHHHHhcCCCccccc-hheeEEeccCC--cccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            9999999999999999986322 22233322222  234455566888899999999999999999999999998753

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=2.2e-33  Score=204.35  Aligned_cols=153  Identities=15%  Similarity=0.244  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       220 qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  296 (374)
T cd05106         220 QVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSD  296 (374)
T ss_pred             HHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999987654433222221223556799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+....... ............  ......+.++.+++.+||+.+|++|||+.++++.|+++.
T Consensus       297 vwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         297 VWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQM--SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccCc--cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            9999999999997 666654332211 111122221111  111224578999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=3e-33  Score=196.88  Aligned_cols=149  Identities=16%  Similarity=0.173  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc--CCCCc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~   78 (163)
                      |++.||.|||   . .+++||||||+||+++.++.+|++|||+++.......     ...++..|+|||.+.+  ..++.
T Consensus       130 ~i~~~l~~lH---~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~  201 (283)
T PHA02988        130 DCCKGLYNLY---KYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPF-----KNVNFMVYFSYKMLNDIFSEYTI  201 (283)
T ss_pred             HHHHHHHHHH---hcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccc-----cccCcccccCHHHhhhccccccc
Confidence            7899999999   5 4888999999999999999999999999876543221     2357789999999876  67899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      ++||||||+++|++++|..||... ...++..........+..  +..++..+.+++.+||+.||++|||+.++++.|+.
T Consensus       202 k~Di~SlGvil~el~~g~~Pf~~~-~~~~~~~~i~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~  278 (283)
T PHA02988        202 KDDIYSLGVVLWEIFTGKIPFENL-TTKEIYDLIINKNNSLKL--PLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL  278 (283)
T ss_pred             hhhhhHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcCCCCCC--CCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence            999999999999999998887643 334444444333322222  22467789999999999999999999999999998


Q ss_pred             Hhh
Q 043958          159 AYR  161 (163)
Q Consensus       159 ~~~  161 (163)
                      ++.
T Consensus       279 ~~~  281 (283)
T PHA02988        279 YKF  281 (283)
T ss_pred             HHh
Confidence            753

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-33  Score=205.75  Aligned_cols=141  Identities=25%  Similarity=0.367  Sum_probs=121.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      +.+.||+|||   +.+.||||||+.|||+++.|.+|++|||.+..+...+      +++||++|||||++.   .+.|+.
T Consensus       134 gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAn------sFvGTPywMAPEVILAMDEGqYdg  204 (948)
T KOG0577|consen  134 GALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDG  204 (948)
T ss_pred             HHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCchh------cccCCccccchhHheeccccccCC
Confidence            5678999999   9999999999999999999999999999987665443      568999999999986   478999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++.++..+.+|.|+.+....++.......+.+.   ....+..|.+|+..||++-|.+|||.++++.
T Consensus       205 kvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  205 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             ccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            999999999999999999999988877776665444443333   3455788999999999999999999999876

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1e-33  Score=196.73  Aligned_cols=137  Identities=22%  Similarity=0.307  Sum_probs=114.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +|+.||.|||   +++|+|||+||+|||++..|.++++|||+++.....+....  +..||+.|||||++.+..|+..+|
T Consensus       133 Ei~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~--tfcGT~eYmAPEil~~~gy~~~vD  207 (357)
T KOG0598|consen  133 EIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATR--TFCGTPEYMAPEILLGKGYDKAVD  207 (357)
T ss_pred             HHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccc--cccCCccccChHHHhcCCCCcccc
Confidence            6889999999   99999999999999999999999999999976544433332  357999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      .||+|+++|+|++|..||. ..+..+..+.+..++...   .+.-.+.+.++++++++..+|++|.
T Consensus       208 WWsLGillYeML~G~pPF~-~~~~~~~~~~I~~~k~~~---~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  208 WWSLGILLYEMLTGKPPFY-AEDVKKMYDKILKGKLPL---PPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             hHhHHHHHHHHhhCCCCCc-CccHHHHHHHHhcCcCCC---CCccCCHHHHHHHHHHhccCHHHhc
Confidence            9999999999999988876 555666777777766222   1222467899999999999999995

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.5e-33  Score=198.10  Aligned_cols=151  Identities=15%  Similarity=0.226  Sum_probs=118.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++++|||+++...............+++.|+|||.+.++.++.++|
T Consensus       132 ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  208 (283)
T cd05091         132 QIAAGMEFLS---SHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSD  208 (283)
T ss_pred             HHHHHHHHHH---HcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchh
Confidence            7899999999   8999999999999999999999999999987664433222222334567899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++...+++......+....+...+..   +....++..+.+++.+||+.+|++||++.++++.|+.
T Consensus       209 v~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         209 IWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVL---PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            9999999999998444444444444444444433321   1223466789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-33  Score=186.64  Aligned_cols=146  Identities=23%  Similarity=0.274  Sum_probs=128.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+++|.|+|   .++|+|||+||.|+++   +....+|++|||++.....+....   -..|+++||+||.+...+|+.
T Consensus       118 QiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~---G~~GtP~fmaPEvvrkdpy~k  191 (355)
T KOG0033|consen  118 QILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWH---GFAGTPGYLSPEVLKKDPYSK  191 (355)
T ss_pred             HHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccc---cccCCCcccCHHHhhcCCCCC
Confidence            8999999999   9999999999999999   344568999999998887333322   347999999999999999999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+|||+-|++++-++.|..||+ .+....++..+..+.+..+.+++...+++.++|+++||..||.+|.|+.|++.
T Consensus       192 pvDiW~cGViLfiLL~G~~PF~-~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  192 PVDIWACGVILYILLVGYPPFW-DEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             cchhhhhhHHHHHHHhCCCCCC-CccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            9999999999999999977765 55667788999999988888899999999999999999999999999999875

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.98  E-value=1.2e-32  Score=193.36  Aligned_cols=154  Identities=19%  Similarity=0.286  Sum_probs=117.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||+++...............++..|++||.+.++.++.++|
T Consensus       117 qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  193 (279)
T cd05111         117 QIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSD  193 (279)
T ss_pred             HHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhh
Confidence            7899999999   8999999999999999999999999999997664433222222334667899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||+++|++++ +..|+. ........+....+. .+  .....++..+.+++.+||..+|++|||+.++++.|..+.
T Consensus       194 v~slG~il~el~t~g~~p~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         194 VWSYGVTVWEMMSYGAEPYA-GMRPHEVPDLLEKGE-RL--AQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHCCC-cC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            9999999999998 555543 333333222222111 11  111234567899999999999999999999999999876


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       270 ~~  271 (279)
T cd05111         270 RD  271 (279)
T ss_pred             hC
Confidence            53

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.98  E-value=4.3e-33  Score=194.65  Aligned_cols=152  Identities=20%  Similarity=0.300  Sum_probs=116.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   .++++||||||+||+++.++.++++|||++..+..............+..|++||...+..++.++|
T Consensus       120 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  196 (272)
T cd05075         120 DIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSD  196 (272)
T ss_pred             HHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHH
Confidence            7899999999   8999999999999999999999999999997765433222222234566799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|+++++++++..+++......+.......+..   .......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       197 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         197 VWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNR---LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            999999999999844444433333333333322221   111223556799999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.98  E-value=6.1e-33  Score=202.12  Aligned_cols=152  Identities=16%  Similarity=0.261  Sum_probs=114.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       222 qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  298 (375)
T cd05104         222 QVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  298 (375)
T ss_pred             HHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCC
Confidence            7899999999   8999999999999999999999999999997665433222211223456799999999888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||||++++++++ +..|+. ...................  .....+.++.+++.+||+.||++|||+.++++.|++.
T Consensus       299 i~slG~~l~ellt~g~~p~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         299 VWSYGILLWEIFSLGSSPYP-GMPVDSKFYKMIKEGYRML--SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHHHHHHhcCCCCCC-CCCchHHHHHHHHhCccCC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            9999999999998 444443 3222211112222221111  1122356899999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.98  E-value=8.2e-33  Score=193.15  Aligned_cols=153  Identities=20%  Similarity=0.307  Sum_probs=118.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||++++++.++++|||+++................+..|++||.+.+..++.++|
T Consensus       121 ~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  197 (273)
T cd05035         121 DIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSD  197 (273)
T ss_pred             HHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccc
Confidence            7899999999   8999999999999999999999999999997765443322222223456799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..+++......+..+.......   ......++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       198 v~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~  273 (273)
T cd05035         198 VWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR---LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL  273 (273)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence            999999999999844444444444444443333221   1122345678999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.98  E-value=7.9e-33  Score=195.27  Aligned_cols=153  Identities=12%  Similarity=0.222  Sum_probs=118.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       131 ~i~~al~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  207 (291)
T cd05094         131 QIASGMVYLA---SQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  207 (291)
T ss_pred             HHHHHHHHHH---hCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654433222222334677899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+..+........   ......+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       208 i~slG~il~el~t~g~~p~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~  283 (291)
T cd05094         208 VWSFGVILWEIFTYGKQPWF-QLSNTEVIECITQGRVL---ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG  283 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhCCCCC---CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            9999999999998 555543 33333333332222211   112234678999999999999999999999999999986


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       284 ~  284 (291)
T cd05094         284 K  284 (291)
T ss_pred             h
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.98  E-value=7.4e-33  Score=196.51  Aligned_cols=155  Identities=16%  Similarity=0.236  Sum_probs=121.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++++|||+++...............++..|+|||.+.+..++.++|
T Consensus       145 qi~~al~~LH---~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (304)
T cd05101         145 QVARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  221 (304)
T ss_pred             HHHHHHHHHH---HCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997765443322222234556799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++...+..++.........   ......++..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus       222 i~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~  298 (304)
T cd05101         222 VWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR---MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT  298 (304)
T ss_pred             HHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence            999999999999855544444455554444332221   11223466789999999999999999999999999999875


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       299 ~  299 (304)
T cd05101         299 L  299 (304)
T ss_pred             h
Confidence            3

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.98  E-value=6.2e-33  Score=197.91  Aligned_cols=153  Identities=20%  Similarity=0.284  Sum_probs=116.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||+++................+..|++||.+.+..++.++|
T Consensus       117 qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  193 (316)
T cd05108         117 QIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSD  193 (316)
T ss_pred             HHHHHHHHHH---hcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999998765443322222223456799999999888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||+++|++++ +..| +......++.. ........  +....++.++.+++.+||..+|++||++.+++..|.++.
T Consensus       194 i~slGv~l~el~t~g~~p-~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         194 VWSYGVTVWELMTFGSKP-YDGIPASEISS-ILEKGERL--PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             hHHHHHHHHHHHcCCCCC-CCCCCHHHHHH-HHhCCCCC--CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999997 5444 43333333222 12221111  122235568999999999999999999999999998876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       270 ~  270 (316)
T cd05108         270 R  270 (316)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.98  E-value=7e-33  Score=194.38  Aligned_cols=155  Identities=20%  Similarity=0.245  Sum_probs=117.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||+++...............++..|++||...+..++.++|
T Consensus       117 qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (279)
T cd05109         117 QIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSD  193 (279)
T ss_pred             HHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhH
Confidence            7899999999   8999999999999999999999999999997765433222211223456799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||||+++|++++...+++.......+........   ..+....++..+.+++.+||..||+.||++.++++.|+++.+
T Consensus       194 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05109         194 VWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE---RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR  270 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            99999999999984444443333333322222211   111223456789999999999999999999999999998865


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       271 ~  271 (279)
T cd05109         271 D  271 (279)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=6.2e-33  Score=198.27  Aligned_cols=148  Identities=17%  Similarity=0.209  Sum_probs=118.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      ||++||+|+|   .+|+.|||+||+|||+..+..+||+|||+|+.+.+....+.   .+.|.+|+|||++.. +-|+.+.
T Consensus       118 QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTe---YVSTRWYRAPEvLLrs~~Ys~pv  191 (538)
T KOG0661|consen  118 QILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTE---YVSTRWYRAPEVLLRSGYYSSPV  191 (538)
T ss_pred             HHHHHHHHHH---hcCcccccCChhheEecccceeEecccccccccccCCCcch---hhhcccccchHHhhhccccCCch
Confidence            8999999999   99999999999999999888999999999998876655443   478999999999865 5689999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhh----------------hhhhcccch---------hhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVI----------------REELCIQSS---------EKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~---------~~~~~~~~~~~li  135 (163)
                      |+|++||+++|+.+....|++....+++.....                ...+.+..+         ....+++++.+++
T Consensus       192 D~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li  271 (538)
T KOG0661|consen  192 DMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLI  271 (538)
T ss_pred             HHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHH
Confidence            999999999999999888887776665443211                000001111         1123668899999


Q ss_pred             HhccccCcCCCCCHHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      .+|++.||.+|||+.++++.
T Consensus       272 ~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  272 ERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             HHHhcCCCccCccHHHHhcC
Confidence            99999999999999999873

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.98  E-value=1.2e-32  Score=194.30  Aligned_cols=152  Identities=20%  Similarity=0.275  Sum_probs=116.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||+++...............++..|+|||.+.+..++.++|
T Consensus       140 qi~~al~~LH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  216 (293)
T cd05053         140 QVARGMEFLA---SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSD  216 (293)
T ss_pred             HHHHHHHHHH---HCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccc
Confidence            7899999999   8999999999999999999999999999997765433222221223456799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||+++|++++ +..|+ ......+.........   ........+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       217 i~slG~il~el~~~g~~p~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         217 VWSFGVLLWEIFTLGGSPY-PGIPVEELFKLLKEGY---RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             eeehhhHHHHHhcCCCCCC-CCCCHHHHHHHHHcCC---cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            9999999999987 55544 3333333333322221   11122244678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.98  E-value=4.5e-33  Score=196.90  Aligned_cols=152  Identities=13%  Similarity=0.124  Sum_probs=115.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-----ccccCccccccccCccccccCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~~~   76 (163)
                      |++.||+|||   +++++||||||+|||++.++.++++|||+++........     .......||+.|+|||...+..+
T Consensus       134 qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~  210 (294)
T PHA02882        134 DMLTTLEYIH---EHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACV  210 (294)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCC
Confidence            7899999999   899999999999999999999999999999766432211     11123468999999999998889


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhh---hhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR---EELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      +.++||||+|+++++++++..||.......+.......   ............++..+.+++..||..+|++||++.++.
T Consensus       211 ~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~  290 (294)
T PHA02882        211 TRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALI  290 (294)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence            99999999999999999998887644332222211110   111111111223467899999999999999999999999


Q ss_pred             HHH
Q 043958          154 KQL  156 (163)
Q Consensus       154 ~~L  156 (163)
                      +.|
T Consensus       291 ~~~  293 (294)
T PHA02882        291 KIF  293 (294)
T ss_pred             Hhh
Confidence            876

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.98  E-value=7.9e-33  Score=192.20  Aligned_cols=147  Identities=23%  Similarity=0.272  Sum_probs=116.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      ||..||+|||   +.+|+||||||+|+|+|.+ |.+||||||.|+....+....   +...+..|+|||.+.+. .|+.+
T Consensus       133 Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epni---SYicSRyYRaPELifga~~Yt~~  206 (364)
T KOG0658|consen  133 QLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNI---SYICSRYYRAPELIFGATEYTTS  206 (364)
T ss_pred             HHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCce---eEEEeccccCHHHHcCccccCce
Confidence            8999999999   8999999999999999877 899999999998876655443   33688899999999875 59999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhh-----------hhc--------cc-----chhhHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-----------ELC--------IQ-----SSEKDKQVQAFVELA  135 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~--------~~-----~~~~~~~~~~~~~li  135 (163)
                      .||||.||++.||+.|+.-|.+....+++...+..-           +..        ..     .-.....+++..+|+
T Consensus       207 IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll  286 (364)
T KOG0658|consen  207 IDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLL  286 (364)
T ss_pred             eEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHH
Confidence            999999999999999988887766555433211100           000        00     002234557899999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+++.++|.+|.++.+++.
T Consensus       287 ~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  287 SKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             HHHhccChhhcCCHHHHhc
Confidence            9999999999999999886

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.98  E-value=1.1e-32  Score=194.34  Aligned_cols=154  Identities=13%  Similarity=0.208  Sum_probs=118.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   .++++||||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       128 ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sD  204 (288)
T cd05093         128 QIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  204 (288)
T ss_pred             HHHHHHHHHH---hCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654332222222234567899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||||+++++++++..+++......+....+..+....   .....+.++.+++.+||+.+|.+|||+.++.+.|+++..
T Consensus       205 iwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~  281 (288)
T cd05093         205 VWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK  281 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence            99999999999984344443333334444433332211   112345689999999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=7.6e-33  Score=191.97  Aligned_cols=150  Identities=16%  Similarity=0.156  Sum_probs=116.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|+|   +.+++|||+||+|++++.+..+|++|||+|+..............+.|.+|.|||.+.. ..|+.+.
T Consensus       133 QiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~ai  209 (359)
T KOG0660|consen  133 QILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAI  209 (359)
T ss_pred             HHHHhcchhh---cccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchh
Confidence            8999999999   89999999999999999999999999999988865422222234578899999999865 4699999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccc--------------hh--------hhhhh-cccch---hhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVD--------------PV--------IREEL-CIQSS---EKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~--------------~~--------~~~~~-~~~~~---~~~~~~~~~~~l  134 (163)
                      ||||+||++.|++++...|.+.+...++-.              .+        +..-+ .++.+   ...+..+.+.+|
T Consensus       210 DiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidL  289 (359)
T KOG0660|consen  210 DIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDL  289 (359)
T ss_pred             hhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHH
Confidence            999999999999999988877665443211              00        01000 00001   112445789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||.-||.+|+|++++++
T Consensus       290 lekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  290 LEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             HHHHhccCccccCCHHHHhc
Confidence            99999999999999999986

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=1.6e-32  Score=198.21  Aligned_cols=144  Identities=23%  Similarity=0.264  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccccCccccccccCccccccCC-CC-c
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YN-E   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~-~   78 (163)
                      |+++|++|||   +++|+||||||+|++++.+ +++||+|||++.....  ......+..|++.|+|||.+.+.. |+ .
T Consensus       128 Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~--~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~  202 (370)
T KOG0583|consen  128 QLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG--EDGLLKTFCGSPAYAAPEVLSGKGTYSGK  202 (370)
T ss_pred             HHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC--CCCcccCCCCCcccCCHHHhCCCCCcCCc
Confidence            8999999999   9999999999999999999 9999999999987741  111122457999999999999877 86 5


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++|.|++|..||.. .....+...+..+.+..+....   +.++..++.+|+..+|.+|+|+.+++.
T Consensus       203 ~aDvWS~GViLy~ml~G~~PF~d-~~~~~l~~ki~~~~~~~p~~~~---S~~~~~Li~~mL~~~P~~R~t~~~i~~  274 (370)
T KOG0583|consen  203 AADVWSLGVILYVLLCGRLPFDD-SNVPNLYRKIRKGEFKIPSYLL---SPEARSLIEKMLVPDPSTRITLLEILE  274 (370)
T ss_pred             hhhhhhhHHHHHHHHhCCCCCCC-ccHHHHHHHHhcCCccCCCCcC---CHHHHHHHHHHcCCCcccCCCHHHHhh
Confidence            79999999999999999999864 4445556666565544333321   789999999999999999999999984

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.97  E-value=5.9e-33  Score=185.97  Aligned_cols=149  Identities=19%  Similarity=0.181  Sum_probs=115.9

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      +++++||+|||   .+.|+|||+||.|+|++.+|.+|++|||+++...........  .+-|.+|.|||.+.|. .|...
T Consensus       108 ~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~--~V~TRWYRAPELLfGsr~Yg~~  182 (318)
T KOG0659|consen  108 LMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTH--QVVTRWYRAPELLFGSRQYGTG  182 (318)
T ss_pred             HHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccccc--ceeeeeccChHHhccchhcCCc
Confidence            36889999999   999999999999999999999999999999988766554443  2678899999999874 59999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccch---------------------hhhhhh--cccchhhHHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDP---------------------VIREEL--CIQSSEKDKQVQAFVELAV  136 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~---------------------~~~~~~--~~~~~~~~~~~~~~~~li~  136 (163)
                      .|+||+||++.|++-+.+-+......+++...                     .....+  .........++....+|+.
T Consensus       183 VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~  262 (318)
T KOG0659|consen  183 VDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLS  262 (318)
T ss_pred             chhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHH
Confidence            99999999999999886665555554433211                     111100  0111123345677899999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++..||.+|+|+.++++
T Consensus       263 ~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  263 KMLTYNPKKRITASQALK  280 (318)
T ss_pred             hhhccCchhcccHHHHhc
Confidence            999999999999999886

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.97  E-value=7.2e-33  Score=198.10  Aligned_cols=147  Identities=22%  Similarity=0.376  Sum_probs=119.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc---cccCccccccccCccccccCC---
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI---KDAIPIGIMGFVATEYVTTGD---   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~~~~PE~~~~~~---   75 (163)
                      +++.||+|||   .++||||||||+|+|++.+|.+||+|||.+...+.+....   ......||+.|+|||.+.++.   
T Consensus       218 Dvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~  294 (576)
T KOG0585|consen  218 DVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFS  294 (576)
T ss_pred             HHHHHHHHHH---hcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCcc
Confidence            5788999999   8999999999999999999999999999997664432211   112347999999999998743   


Q ss_pred             C-CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 Y-NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~-~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      + +.+.||||+|+++|+++.|..||+. +...++.+++.....  ..+...+..+.+++||+++|.+||+.|.+..+|..
T Consensus       295 ~~g~a~DiWalGVTLYCllfG~~PF~~-~~~~~l~~KIvn~pL--~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  295 YSGFALDIWALGVTLYCLLFGQLPFFD-DFELELFDKIVNDPL--EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             ccchhhhhhhhhhhHHHhhhccCCccc-chHHHHHHHHhcCcc--cCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence            3 4589999999999999999999874 455567788777653  33444456789999999999999999999988754

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.97  E-value=4.8e-33  Score=199.96  Aligned_cols=146  Identities=20%  Similarity=0.319  Sum_probs=127.2

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      +|++.|+.|||   +++|+|||+|+.||++++++.+++.|||+++.+.......  .+..||+.||+||.+.+.+|+.|+
T Consensus       113 ~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a--~tvvGTp~YmcPEil~d~pYn~KS  187 (426)
T KOG0589|consen  113 VQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLA--STVVGTPYYMCPEILSDIPYNEKS  187 (426)
T ss_pred             HHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhh--heecCCCcccCHHHhCCCCCCccC
Confidence            58999999999   8999999999999999999999999999999887665222  356899999999999999999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      |+||+||.++|+.+..++|. ..+...++.++....+   .+.+...+.+++.+|..|+..+|+.||++.+++..
T Consensus       188 DiWsLGC~~yEm~~lk~aF~-a~~m~~Li~ki~~~~~---~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  188 DIWSLGCCLYEMCTLKPAFK-ASNMSELILKINRGLY---SPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             cchhhcchHHHHHhcccccC-ccchHHHHHHHhhccC---CCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            99999999999998877764 6677778888777753   33445577899999999999999999999999875

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.97  E-value=1.7e-32  Score=190.70  Aligned_cols=154  Identities=21%  Similarity=0.278  Sum_probs=118.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |+++||+|||   ..+++||||||+||+++.++.++++|||+++........  .......++..|+|||.+.+..++.+
T Consensus       106 ~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  182 (262)
T cd05058         106 QVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTK  182 (262)
T ss_pred             HHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchH
Confidence            7899999999   899999999999999999999999999998755432211  11112235668999999988889999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +|+||||+++++++++..+++......+.......+..   .......+..+.+++.+||..+|++||++.++++.|+++
T Consensus       183 ~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         183 SDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRR---LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC---CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            99999999999999977766554443333333322211   111223456899999999999999999999999999988


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      +.
T Consensus       260 ~~  261 (262)
T cd05058         260 FS  261 (262)
T ss_pred             hc
Confidence            64

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=2.4e-32  Score=190.18  Aligned_cols=151  Identities=16%  Similarity=0.273  Sum_probs=115.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   ..+++|+||||+||+++.++.++++|||++........... .....+..|++||.+.+..++.++|
T Consensus       112 ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  187 (263)
T cd05052         112 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSD  187 (263)
T ss_pred             HHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc-CCCCCccccCCHHHhccCCCCchhH
Confidence            7899999999   89999999999999999999999999999876654322111 1122355799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||++++++++ +..|+. .....+........ .  ........+.++.+++.+||+.+|++|||+.++.+.|++++
T Consensus       188 v~slG~il~el~t~g~~p~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  263 (263)
T cd05052         188 VWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKG-Y--RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF  263 (263)
T ss_pred             HHHHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHCC-C--CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence            9999999999998 555543 33333333332221 1  11222345678999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.97  E-value=8.4e-33  Score=207.34  Aligned_cols=147  Identities=18%  Similarity=0.218  Sum_probs=118.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.+||+|||+++...............|+..|+|||.+.+..++.++|
T Consensus       151 qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~D  227 (496)
T PTZ00283        151 QVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKAD  227 (496)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999997765433332233456899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      |||+|+++|+++++..||. .....+++.........   +.....++.+.+++.+||+.+|++||++.++++.
T Consensus       228 VwSlGvilyeLltG~~Pf~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        228 MFSLGVLLYELLTLKRPFD-GENMEEVMHKTLAGRYD---PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            9999999999999988765 33444444444433321   1223456789999999999999999999998763

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=1.4e-32  Score=195.15  Aligned_cols=152  Identities=18%  Similarity=0.276  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++...............++..|+|||.+.++.++.++|
T Consensus       146 ~i~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  222 (304)
T cd05096         146 QIASGMKYLS---SLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASD  222 (304)
T ss_pred             HHHHHHHHHH---HCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654433222222334567899999998888999999


Q ss_pred             eeecchhhHHHhhhc--cccccccchhhccchhhh---hh-hcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRV--KKHIECNTFDEIVDPVIR---EE-LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~--~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++++++++.  .|+. .....+.......   .. ..........++..+.+++.+||+.+|++|||+.++.+.
T Consensus       223 v~slG~~l~el~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~  301 (304)
T cd05096         223 VWAFGVTLWEILMLCKEQPYG-ELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAF  301 (304)
T ss_pred             hHHHHHHHHHHHHccCCCCCC-cCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            999999999998643  3332 2222222221110   00 000011122356789999999999999999999999988


Q ss_pred             HH
Q 043958          156 LR  157 (163)
Q Consensus       156 L~  157 (163)
                      |+
T Consensus       302 l~  303 (304)
T cd05096         302 LT  303 (304)
T ss_pred             Hh
Confidence            86

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.97  E-value=2.2e-32  Score=192.92  Aligned_cols=155  Identities=17%  Similarity=0.270  Sum_probs=118.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++...............++..|++||.+.+..++.++|
T Consensus       135 ~i~~~l~~LH---~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  211 (290)
T cd05045         135 QISRGMQYLA---EMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSD  211 (290)
T ss_pred             HHHHHHHHHH---HCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhH
Confidence            7899999999   8999999999999999999999999999987654332222222234566899999988888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||||++++++++...+++......++....... .  ........+.++.+++.+||+.+|++||++.++++.|+++..
T Consensus       212 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~  288 (290)
T cd05045         212 VWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG-Y--RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV  288 (290)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-C--CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence            9999999999998334444443333333322211 1  111223456789999999999999999999999999999876


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       289 ~  289 (290)
T cd05045         289 K  289 (290)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=1.7e-32  Score=193.39  Aligned_cols=146  Identities=16%  Similarity=0.166  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++++|||++........   .....++..|+|||.+.+..++.++|
T Consensus       118 qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  191 (290)
T cd07862         118 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVD  191 (290)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCcc---cccccccccccChHHHhCCCCCCccc
Confidence            7899999999   89999999999999999999999999999976543321   12345888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcc-----------------------cchhhHHHHHHHHHHHHhc
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI-----------------------QSSEKDKQVQAFVELAVKC  138 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~li~~c  138 (163)
                      +||+|+++++++++..|+......+ .+..+......+                       ........+..+.+++.+|
T Consensus       192 iwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  270 (290)
T cd07862         192 LWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKC  270 (290)
T ss_pred             hHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHH
Confidence            9999999999999877765433222 111111100000                       0000113456788999999


Q ss_pred             cccCcCCCCCHHHHHH
Q 043958          139 VSESAEDRPTMIDVAK  154 (163)
Q Consensus       139 l~~~p~~Rpt~~~i~~  154 (163)
                      |+.||++|||+.++++
T Consensus       271 l~~~P~~R~s~~~~l~  286 (290)
T cd07862         271 LTFNPAKRISAYSALS  286 (290)
T ss_pred             hccCchhcCCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=3.6e-32  Score=194.58  Aligned_cols=143  Identities=18%  Similarity=0.288  Sum_probs=112.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +.+++||||||+||+++.++.++|+|||+++........  .....|++.|+|||.+.+..++.++|
T Consensus       103 qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (323)
T cd05571         103 EIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCc--ccceecCccccChhhhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998654322211  12345899999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+||+++++++|..|+... ....+...+.......    ....+.++.+++.+||+.||++||     ++.++++
T Consensus       178 iwSlG~il~elltg~~Pf~~~-~~~~~~~~~~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         178 WWGLGVVMYEMMCGRLPFYNQ-DHEKLFELILMEEIRF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             CcccchhhhhhhcCCCCCCCC-CHHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            999999999999998887643 3333333333332222    223567899999999999999999     7888765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.97  E-value=3.2e-32  Score=190.86  Aligned_cols=151  Identities=19%  Similarity=0.318  Sum_probs=114.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.++.++.++|
T Consensus       127 ~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (277)
T cd05062         127 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  203 (277)
T ss_pred             HHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhH
Confidence            6899999999   8999999999999999999999999999987654433222221224567899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||||+++++++++..+++......+...........   ......+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       204 i~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         204 VWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            9999999999998544444343333333332222211   1122355789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=2.9e-32  Score=191.99  Aligned_cols=144  Identities=22%  Similarity=0.299  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++++|||++.........   ....|+..|+|||.+.+..++.++|
T Consensus       110 qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05631         110 ELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV---RGRVGTVGYMAPEVINNEKYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee---cCCCCCCCccCHhhhcCCCCCcccC
Confidence            7899999999   899999999999999999999999999999765433221   1335889999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccch--hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTF--DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      |||+|++++++++|..|+......  .+.+......   .........+..+.+|+.+||+.||++||+     ++++++
T Consensus       184 vwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE---DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             chhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc---ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            999999999999998887643221  1111111111   111222345678999999999999999997     777775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.4e-32  Score=198.43  Aligned_cols=149  Identities=19%  Similarity=0.145  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++|+||||||+||+++.++.++|+|||++.......... .....||+.|+|||.+.+..++.++|
T Consensus       190 qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~D  265 (391)
T PHA03212        190 SVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANK-YYGWAGTIATNAPELLARDPYGPAVD  265 (391)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccc-cccccCccCCCChhhhcCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999986543222111 12346899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhc------cchhhh--------------------------hh-----hcccchhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEI------VDPVIR--------------------------EE-----LCIQSSEK  124 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~------~~~~~~--------------------------~~-----~~~~~~~~  124 (163)
                      +||+|+++|+++++..|++........      +..+..                          ..     ..+.....
T Consensus       266 iwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (391)
T PHA03212        266 IWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNL  345 (391)
T ss_pred             HHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence            999999999999998877643221100      000000                          00     00001111


Q ss_pred             HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          125 DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       125 ~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...+.++.+++.+||+.||++|||+.++++
T Consensus       346 ~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        346 YELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            234568999999999999999999999986

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=3.6e-32  Score=193.25  Aligned_cols=154  Identities=18%  Similarity=0.249  Sum_probs=118.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       148 qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  224 (307)
T cd05098         148 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  224 (307)
T ss_pred             HHHHHHHHHH---HCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHH
Confidence            7889999999   8999999999999999999999999999987654322211111122446799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++...+..++........   ........+.++.+++.+||..+|++|||+.++++.|+++..
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~  301 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA  301 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCC---CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence            99999999999985555554555444444332221   112223456789999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=6.4e-32  Score=191.19  Aligned_cols=150  Identities=17%  Similarity=0.261  Sum_probs=113.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++.........   .....+..|++||...+..++.++|
T Consensus       127 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~D  200 (297)
T cd05089         127 DVATGMQYLS---EKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVYVKK---TMGRLPVRWMAIESLNYSVYTTKSD  200 (297)
T ss_pred             HHHHHHHHHH---HCCcccCcCCcceEEECCCCeEEECCcCCCccccceecc---CCCCcCccccCchhhccCCCCchhh
Confidence            6889999999   899999999999999999999999999998543221111   1112345699999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||++++++++ +..|+. .....+........ .  .......++..+.+++.+||+.+|.+|||++++++.|+++.
T Consensus       201 vwSlG~il~el~t~g~~pf~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~  276 (297)
T cd05089         201 VWSFGVLLWEIVSLGGTPYC-GMTCAELYEKLPQG-Y--RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML  276 (297)
T ss_pred             HHHHHHHHHHHHcCCCCCCC-CCCHHHHHHHHhcC-C--CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999997 655554 33333333332221 1  11122345678999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       277 ~  277 (297)
T cd05089         277 E  277 (297)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=7.2e-32  Score=188.89  Aligned_cols=151  Identities=21%  Similarity=0.328  Sum_probs=115.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||+++...............++..|+|||.+.++.++.++|
T Consensus       127 ~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  203 (277)
T cd05032         127 EIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSD  203 (277)
T ss_pred             HHHHHHHHHH---hCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccc
Confidence            7899999999   8999999999999999999999999999987665433222222334667899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++...+++......+.......... .  ..+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       204 i~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         204 VWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGH-L--DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             hHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCC-C--CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            999999999999843444433333443333332211 1  1122346789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-32  Score=181.53  Aligned_cols=156  Identities=17%  Similarity=0.199  Sum_probs=117.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-------ccccCccccccccCcccccc-
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-------IKDAIPIGIMGFVATEYVTT-   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~-   73 (163)
                      +|++||++||.. ..++.||||||.||+++.++.+++.|||.+....-.-..       +.-.....|..|+|||.+.- 
T Consensus       135 gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk  213 (302)
T KOG2345|consen  135 GICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK  213 (302)
T ss_pred             HHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc
Confidence            688999999943 234999999999999999999999999998765421111       11123358889999998853 


Q ss_pred             --CCCCcccceeecchhhHHHhhhccccccccch-hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 --GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTF-DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 --~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                        ...+.++|||||||++|+++.+..||-..... ..+--.+...++  ..+.....++.+.++++.|++.||.+||++.
T Consensus       214 ~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~--s~P~~~~yse~l~~lik~mlqvdP~qRP~i~  291 (302)
T KOG2345|consen  214 SHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQI--SIPNSSRYSEALHQLIKSMLQVDPNQRPTIP  291 (302)
T ss_pred             cCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeecccc--ccCCCCCccHHHHHHHHHHhcCCcccCCCHH
Confidence              34788999999999999999999997542221 112222222232  2233344789999999999999999999999


Q ss_pred             HHHHHHHHHh
Q 043958          151 DVAKQLRQAY  160 (163)
Q Consensus       151 ~i~~~L~~~~  160 (163)
                      +++..++.+.
T Consensus       292 ~ll~~~d~Li  301 (302)
T KOG2345|consen  292 ELLSKLDDLI  301 (302)
T ss_pred             HHHHHHHhhc
Confidence            9999998875

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=6.6e-32  Score=189.37  Aligned_cols=150  Identities=15%  Similarity=0.264  Sum_probs=115.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       130 ~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  206 (280)
T cd05049         130 QIASGMVYLA---SQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  206 (280)
T ss_pred             HHHHHHHHHh---hCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhh
Confidence            6889999999   8999999999999999999999999999987654332222112234567899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+.. ....+....+..+...   ......+..+.+++.+||+.+|++||++.++++.|++
T Consensus       207 i~slG~il~e~~~~g~~p~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         207 VWSFGVVLWEIFTYGKQPWYG-LSNEEVIECITQGRLL---QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             HHHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            9999999999998 6666543 3333333333322211   1122456789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=5.8e-32  Score=187.98  Aligned_cols=150  Identities=21%  Similarity=0.309  Sum_probs=114.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........... ....++..|+|||.+.+..++.++|
T Consensus       111 ~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05072         111 QIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSD  186 (261)
T ss_pred             HHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc-CCCccceecCCHHHhccCCCChhhh
Confidence            7899999999   89999999999999999999999999999977654332211 1223556799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|++++++++ +..|+. .............. .  ..+.....+.++.+++.+||..+|++||+++++.+.|+++
T Consensus       187 i~slG~~l~~l~t~g~~p~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         187 VWSFGILLYEIVTYGKIPYP-GMSNSDVMSALQRG-Y--RMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             hhhhHHHHHHHHccCCCCCC-CCCHHHHHHHHHcC-C--CCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            9999999999998 555543 33333333222222 1  1122234567899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=1.1e-31  Score=191.42  Aligned_cols=154  Identities=19%  Similarity=0.266  Sum_probs=116.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++++|||+++...............++..|+|||.+.++.++.++|
T Consensus       142 qi~~aL~~lH---~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (314)
T cd05099         142 QVARGMEYLE---SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSD  218 (314)
T ss_pred             HHHHHHHHHH---HCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccch
Confidence            7899999999   8999999999999999999999999999997664332221111222445799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++...++......++........   .......++.++.+++.+||+.+|++|||+.++++.|+++..
T Consensus       219 iwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~  295 (314)
T cd05099         219 VWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGH---RMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA  295 (314)
T ss_pred             hhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence            99999999999984444344444444443332221   111123456689999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.97  E-value=8.8e-32  Score=188.86  Aligned_cols=153  Identities=18%  Similarity=0.223  Sum_probs=117.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||+++.+.............++..|+|||.+.+..++.++|
T Consensus       125 ~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~D  201 (280)
T cd05043         125 QIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASD  201 (280)
T ss_pred             HHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhh
Confidence            7899999999   8999999999999999999999999999997664433222111223566799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....++....... .  .......++.++.+++.+||..+|++|||+.++++.|+.+.
T Consensus       202 i~slG~~l~el~~~g~~p~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         202 VWSFGVLLWELMTLGQTPYV-EIDPFEMAAYLKDG-Y--RLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             HHHhHHHHHHHhcCCCCCcC-cCCHHHHHHHHHcC-C--CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            9999999999998 655543 33323322222221 1  11122345678999999999999999999999999999986


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       278 ~  278 (280)
T cd05043         278 A  278 (280)
T ss_pred             h
Confidence            5

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=7.1e-32  Score=190.61  Aligned_cols=153  Identities=20%  Similarity=0.261  Sum_probs=112.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||+++...............++..|+|||.+.+..++.++|
T Consensus       138 ~i~~al~~LH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (296)
T cd05051         138 QIASGMRYLE---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSD  214 (296)
T ss_pred             HHHHHHHHHH---HcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccch
Confidence            7899999999   8999999999999999999999999999987654433222222334567899999998888999999


Q ss_pred             eeecchhhHHHhh--hccccccccchhhccchhhhh----hhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLN--RVKKHIECNTFDEIVDPVIRE----ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|++++++++  +..|+. .....+........    ............+.++.+++.+||+.+|++|||+.++++.
T Consensus       215 v~slG~~l~el~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~  293 (296)
T cd05051         215 VWAFGVTLWEILTLCREQPYE-HLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLF  293 (296)
T ss_pred             hhhhHHHHHHHHhcCCCCCCC-CcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHH
Confidence            9999999999987  333332 22222222221111    1011111122345789999999999999999999999998


Q ss_pred             HHH
Q 043958          156 LRQ  158 (163)
Q Consensus       156 L~~  158 (163)
                      |++
T Consensus       294 L~~  296 (296)
T cd05051         294 LQR  296 (296)
T ss_pred             hcC
Confidence            863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=6.5e-32  Score=194.25  Aligned_cols=149  Identities=19%  Similarity=0.204  Sum_probs=114.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +++++|||||.+|||+|.+|.+||+|||+|+++........+ ..+-|++|.|||.+.+. .|+.+.
T Consensus       226 QLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T-~rVvTLWYRpPELLLG~t~Yg~aV  301 (560)
T KOG0600|consen  226 QLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYT-SRVVTLWYRPPELLLGATSYGTAV  301 (560)
T ss_pred             HHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccc-cceEEeeccChHHhcCCcccccce
Confidence            8999999999   999999999999999999999999999999988766554443 45789999999999975 599999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhcc-------------chhhh----hhhcccch-------hhHHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIV-------------DPVIR----EELCIQSS-------EKDKQVQAFVELAV  136 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~----~~~~~~~~-------~~~~~~~~~~~li~  136 (163)
                      |+||.|||+.||+.+...+......+++-             .+...    ..+.+..+       .....++...+|+.
T Consensus       302 DlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~  381 (560)
T KOG0600|consen  302 DLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLE  381 (560)
T ss_pred             eehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHH
Confidence            99999999999999987766544332211             11000    00000011       11234467889999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+|..||++|.|+.+++.
T Consensus       382 ~lL~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  382 KLLSLDPDKRGTASSALQ  399 (560)
T ss_pred             HHhccCccccccHHHHhc
Confidence            999999999999998875

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.97  E-value=5.5e-32  Score=190.04  Aligned_cols=151  Identities=14%  Similarity=0.193  Sum_probs=113.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       130 qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  206 (280)
T cd05092         130 QIASGMVYLA---SLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD  206 (280)
T ss_pred             HHHHHHHHHH---HCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhh
Confidence            7889999999   8999999999999999999999999999987654332222112223567899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||||+++++++++..+++......+..........   ......++..+.+++.+||+.||++||++.++.+.|++
T Consensus       207 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         207 IWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRE---LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             HHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCcc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            999999999999844444333333333333322211   11122456789999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.97  E-value=5.2e-32  Score=202.60  Aligned_cols=146  Identities=20%  Similarity=0.194  Sum_probs=116.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||+++...............||+.|+|||.+.+..++.++|
T Consensus       177 qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  253 (478)
T PTZ00267        177 QIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKAD  253 (478)
T ss_pred             HHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHh
Confidence            7899999999   8999999999999999999999999999998765443322233456899999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++++++++..|+... ...+++.....+...   +.....+..+.+++.+||..+|++||++.+++.
T Consensus       254 v~slG~~l~el~tg~~Pf~~~-~~~~~~~~~~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        254 MWSLGVILYELLTLHRPFKGP-SQREIMQQVLYGKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            999999999999998887533 333444444433321   112235578999999999999999999999875

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=8.4e-32  Score=197.29  Aligned_cols=154  Identities=16%  Similarity=0.291  Sum_probs=118.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       245 qi~~aL~~LH---~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  321 (400)
T cd05105         245 QVARGMEFLA---SKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSD  321 (400)
T ss_pred             HHHHHHHHHH---hCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999997664433322222334667899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||++++++++ +..|+............ .....  ........+..+.+++.+||+.+|++|||+.++.+.|+++.
T Consensus       322 iwSlGvil~ellt~g~~P~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         322 VWSYGILLWEIFSLGGTPYPGMIVDSTFYNK-IKSGY--RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             HHHHHHHHHHHHHCCCCCCcccchhHHHHHH-HhcCC--CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            9999999999987 65665432222222222 22211  11222345678999999999999999999999999999887


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       399 ~  399 (400)
T cd05105         399 P  399 (400)
T ss_pred             C
Confidence            5

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=7.4e-32  Score=189.84  Aligned_cols=149  Identities=15%  Similarity=0.170  Sum_probs=111.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++........... ....++..|+|||.+.+..++.++|
T Consensus       108 qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  183 (287)
T cd07848         108 QLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANY-TEYVATRWYRSPELLLGAPYGKAVD  183 (287)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccc-cccccccccCCcHHHcCCCCCCchh
Confidence            7899999999   89999999999999999999999999999977643322211 2345888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhh-------------hhh-----c-cc--------chhhHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-------------EEL-----C-IQ--------SSEKDKQVQAFVEL  134 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~-----~-~~--------~~~~~~~~~~~~~l  134 (163)
                      +||+|++++++++|..||......+........             ...     . +.        .......+..+.++
T Consensus       184 iwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl  263 (287)
T cd07848         184 MWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDL  263 (287)
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHH
Confidence            999999999999998777543322211110000             000     0 00        00011245679999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.||++|||++++++
T Consensus       264 l~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         264 MKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHHccCCcccCCCHHHHhc
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=8.2e-32  Score=189.34  Aligned_cols=150  Identities=19%  Similarity=0.311  Sum_probs=114.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       132 ~i~~al~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  208 (283)
T cd05090         132 QIAAGMEYLS---SHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSD  208 (283)
T ss_pred             HHHHHHHHHH---hcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997664433222222334566799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+. .....++.........   .+....++..+.+++.+||+.+|++||++.++++.|+.
T Consensus       209 v~slG~il~el~~~g~~p~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         209 IWSFGVVLWEIFSFGLQPYY-GFSNQEVIEMVRKRQL---LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             hHHHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            9999999999998 555543 3333333333222221   11223456789999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=1.1e-32  Score=191.67  Aligned_cols=149  Identities=28%  Similarity=0.400  Sum_probs=112.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+++|++|+++||+++.++.+||+|||++....................|+|||.+.+..++.++|
T Consensus       111 ~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksD  187 (259)
T PF07714_consen  111 QIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSD  187 (259)
T ss_dssp             HHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHH
T ss_pred             cccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999   8899999999999999999999999999997774333333223345677899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      |||||+++||++++...++......++........ .  ......++..+.+++.+||+.+|++|||+.++++.|
T Consensus       188 VysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  188 VYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ-R--LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE-E--TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccc-c--ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            99999999999996544444445555444443322 1  122334567899999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.7e-32  Score=191.75  Aligned_cols=139  Identities=19%  Similarity=0.233  Sum_probs=109.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++++|||+++........  .....|++.|+|||.+.+..++.++|
T Consensus       101 qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  175 (312)
T cd05585         101 ELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDK--TNTFCGTPEYLAPELLLGHGYTKAVD  175 (312)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCc--cccccCCcccCCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998754322221  12345889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      +||+|++++++++|..|+... ...+...........    .....+..+.+++.+||..||++||++.
T Consensus       176 vwslGvil~el~tg~~pf~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dp~~R~~~~  239 (312)
T cd05585         176 WWTLGVLLYEMLTGLPPFYDE-NVNEMYRKILQEPLR----FPDGFDRDAKDLLIGLLSRDPTRRLGYN  239 (312)
T ss_pred             eechhHHHHHHHhCCCCcCCC-CHHHHHHHHHcCCCC----CCCcCCHHHHHHHHHHcCCCHHHcCCCC
Confidence            999999999999998887643 333344433333221    2234567899999999999999998643

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.97  E-value=1.5e-31  Score=182.17  Aligned_cols=147  Identities=20%  Similarity=0.271  Sum_probs=126.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC---CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||..|+.|||   +.+|.|||+||+|+|..   .|..+|++|||+++..........   .-.|++|.|||.+...+|+.
T Consensus       169 qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~T---Pc~TPyYvaPevlg~eKydk  242 (400)
T KOG0604|consen  169 QIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMT---PCFTPYYVAPEVLGPEKYDK  242 (400)
T ss_pred             HHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecccccccccCCCccccC---CcccccccCHHHhCchhcCC
Confidence            6889999999   99999999999999994   556789999999977665444433   35788999999998888999


Q ss_pred             ccceeecchhhHHHhhhccccccccch---hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTF---DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+|+||+|+++|-+++|..||++....   ..+..++..+.+.++.+++...++..+++|+.+|+.+|++|.|+.++++
T Consensus       243 scdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  243 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             CCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            999999999999999999998865542   1234556778888999999999999999999999999999999999875

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=1.9e-31  Score=185.70  Aligned_cols=152  Identities=24%  Similarity=0.306  Sum_probs=117.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||.+........... ....++..|++||...+..++.++|
T Consensus       110 ~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~D  185 (262)
T cd05071         110 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD  185 (262)
T ss_pred             HHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeeccccccccc-cCCcccceecCHhHhccCCCCchhh
Confidence            7899999999   89999999999999999999999999999976643332111 1223566799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..+++......+.........   ..+.....+..+.+++.+|++.+|++||++.++.+.|+..+
T Consensus       186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         186 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC---CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            99999999999995555444443333333322221   11223456778999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=1e-31  Score=187.43  Aligned_cols=150  Identities=15%  Similarity=0.181  Sum_probs=113.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||.+......... ......++..|+|||.+.+..++.++|
T Consensus       115 ~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~D  190 (266)
T cd05064         115 GLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY-TTMSGKSPVLWAAPEAIQYHHFSSASD  190 (266)
T ss_pred             HHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccchh-cccCCCCceeecCHHHHhhCCccchhH
Confidence            7899999999   899999999999999999999999999987554322111 111223456899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|++++++++ +..|+. .....+....+....   ..+....++..+.+++.+||+.+|++||++.++.+.|.++
T Consensus       191 i~slG~~l~ell~~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         191 VWSFGIVMWEVMSYGERPYW-DMSGQDVIKAVEDGF---RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHHHHhcCCCCCcC-cCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            9999999999876 655554 333333333322221   1122334677899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.3e-31  Score=198.05  Aligned_cols=142  Identities=20%  Similarity=0.221  Sum_probs=126.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc-cc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE-KC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~-~~   80 (163)
                      ||+.|+.|+|   ..+|+|||+||+|+|++..+++||+|||+|.....++-...   .-|++.|.+||++.+.+|.. ++
T Consensus       120 QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeT---SCGSPHYA~PEIV~G~pYdG~~s  193 (786)
T KOG0588|consen  120 QILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLET---SCGSPHYAAPEIVSGRPYDGRPS  193 (786)
T ss_pred             HHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecccCCccccc---cCCCcccCCchhhcCCCCCCCcc
Confidence            8999999999   99999999999999999999999999999977766654443   36999999999999999965 79


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||-|++++.|++|..||- +++...++.++..+.+..+    .+.+.++++|+.+|+..||+.|.|+++|++
T Consensus       194 DVWSCGVILfALLtG~LPFd-DdNir~LLlKV~~G~f~MP----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  194 DVWSCGVILFALLTGKLPFD-DDNIRVLLLKVQRGVFEMP----SNISSEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             ccchhHHHHHHHHhCCCCCC-CccHHHHHHHHHcCcccCC----CcCCHHHHHHHHHHhccCccccccHHHHhh
Confidence            99999999999999988875 7788889999888875443    566789999999999999999999999987

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.97  E-value=1e-31  Score=186.43  Aligned_cols=151  Identities=19%  Similarity=0.246  Sum_probs=115.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccc-cCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-AIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||++............ ....++..|+|||.+....++.++
T Consensus       103 qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05116         103 QVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKS  179 (257)
T ss_pred             HHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchh
Confidence            7899999999   899999999999999999999999999999766543322111 112335689999998877889999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||+|++++++++ +..|+. .....++...+..+.. .  ......++++.+++.+||+.+|++||++.+|.+.|++.
T Consensus       180 Di~slG~~l~el~t~g~~p~~-~~~~~~~~~~i~~~~~-~--~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         180 DVWSFGVLMWEAFSYGQKPYK-GMKGNEVTQMIESGER-M--ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHCCCC-C--CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            99999999999998 555553 3333333333332221 1  12234567899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=1.8e-31  Score=191.75  Aligned_cols=154  Identities=17%  Similarity=0.245  Sum_probs=118.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++++|||+++...............++..|+|||.+.+..++.++|
T Consensus       142 qi~~al~~LH---~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  218 (334)
T cd05100         142 QVARGMEYLA---SQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  218 (334)
T ss_pred             HHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhh
Confidence            7899999999   8999999999999999999999999999987664433222221223446799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++......+..........   ......++..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus       219 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         219 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR---MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            999999999999844444444444444443322211   11122455789999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-32  Score=204.87  Aligned_cols=154  Identities=16%  Similarity=0.235  Sum_probs=127.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCcc--ccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI--GIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~--~~~~~~~PE~~~~~~~~~~   79 (163)
                      .|+.|++||-   +++++||||.+.|||++.+-.+||+|||+++...++...... +..  -...|.|||.+...+++.+
T Consensus       739 GIAsGMkYLs---dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~yt-t~GGKIPiRWTAPEAIa~RKFTsA  814 (996)
T KOG0196|consen  739 GIASGMKYLS---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYT-TLGGKIPIRWTAPEAIAYRKFTSA  814 (996)
T ss_pred             HHHHHhHHHh---hcCchhhhhhhhheeeccceEEEeccccceeecccCCCcccc-ccCCccceeecChhHhhhcccCch
Confidence            4789999999   999999999999999999999999999999977655422211 222  2358999999999999999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||||+|+++||+++.+.-++.+...++++..+..+   .+.+.+.+|+..+.+|+..||++|-.+||.|.+|+..|+++
T Consensus       815 SDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~g---yRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDkl  891 (996)
T KOG0196|consen  815 SDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQG---YRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKL  891 (996)
T ss_pred             hhccccceEEEEecccCCCcccccchHHHHHHHHhc---cCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHH
Confidence            999999999999987554444455666677665554   34455556899999999999999999999999999999998


Q ss_pred             hhc
Q 043958          160 YRF  162 (163)
Q Consensus       160 ~~~  162 (163)
                      .+.
T Consensus       892 Irn  894 (996)
T KOG0196|consen  892 IRN  894 (996)
T ss_pred             hcC
Confidence            764

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=4.9e-32  Score=194.70  Aligned_cols=150  Identities=18%  Similarity=0.202  Sum_probs=108.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCcccccc--CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTT--GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~--~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||+++........ .......++..|+|||.+.+  ..++.
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  187 (338)
T cd07859         111 QLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTP  187 (338)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCc
Confidence            7899999999   899999999999999999999999999998755332211 11123468889999998865  56889


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhc--------------cchhhh-------hhhc--ccc---hhhHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEI--------------VDPVIR-------EELC--IQS---SEKDKQVQAFV  132 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~--------------~~~~~~-------~~~~--~~~---~~~~~~~~~~~  132 (163)
                      ++||||+|++++++++|..|+........+              ...+..       ....  ...   ......++.+.
T Consensus       188 ~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (338)
T cd07859         188 AIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLAL  267 (338)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHH
Confidence            999999999999999998776543221100              000000       0000  000   00112346788


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+||+.+|++|||++++++
T Consensus       268 ~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         268 RLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHHHHcCcCcccCCCHHHHhc
Confidence            9999999999999999999986

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.97  E-value=2.3e-31  Score=185.50  Aligned_cols=151  Identities=19%  Similarity=0.271  Sum_probs=115.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|++||.+.+..++.++|
T Consensus       114 ~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~D  190 (266)
T cd05033         114 GIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASD  190 (266)
T ss_pred             HHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccc
Confidence            7899999999   8999999999999999999999999999998765222221111223456799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|++++++++ +..|+. .....+....+.... ..  +....++..+.+++.+||+.+|++||++.++++.|+++
T Consensus       191 v~slG~~l~~l~~~g~~p~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         191 VWSFGIVMWEVMSYGERPYW-DMSNQDVIKAVEDGY-RL--PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             hHHHHHHHHHHHccCCCCCC-CCCHHHHHHHHHcCC-CC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999987 655543 333333333332221 11  12234567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=1.3e-31  Score=185.74  Aligned_cols=146  Identities=20%  Similarity=0.310  Sum_probs=112.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........     ....+..|+|||.+.+..++.++|
T Consensus       110 ~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~D  181 (256)
T cd05082         110 DVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceeccccCC-----CCccceeecCHHHHccCCCCchhh
Confidence            7899999999   89999999999999999999999999999865443221     123456799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|++++++++ +..|+ ......++...+... .  .......++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       182 v~slG~i~~~l~~~g~~p~-~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         182 VWSFGILLWEIYSFGRVPY-PRIPLKDVVPRVEKG-Y--KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHhcC-C--CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            9999999999997 54444 333333333322221 1  1112234567899999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=2.1e-31  Score=185.65  Aligned_cols=152  Identities=16%  Similarity=0.239  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       114 ~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~D  188 (267)
T cd08228         114 QLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHH--hcCCCCccccChhhhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999987665432211  1235778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccc-hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT-FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..|+..... ............  .+.......+..+.+++.+||..+|++||++.++++.|+++.
T Consensus       189 i~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         189 IWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            99999999999999988764332 122222222111  111222345678999999999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.97  E-value=1.6e-31  Score=184.89  Aligned_cols=150  Identities=17%  Similarity=0.244  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++.................+..|+|||.+.++.++.++|
T Consensus       102 qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  178 (252)
T cd05084         102 NAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESD  178 (252)
T ss_pred             HHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHH
Confidence            7899999999   8999999999999999999999999999987554322111111112345699999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      +||+|++++++++...+++...............   .........+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       179 v~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         179 VWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG---VRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC---CCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            9999999999998444443332222222211111   111222345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.97  E-value=1.8e-31  Score=185.31  Aligned_cols=152  Identities=18%  Similarity=0.272  Sum_probs=114.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccc-cCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-AIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||++............ ....++..|+|||.+.+..++.++
T Consensus       103 ~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05115         103 QVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRS  179 (257)
T ss_pred             HHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchh
Confidence            7899999999   899999999999999999999999999998765443222111 111234679999999888889999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||||++++++++ +..|+. .....+.......+.   ....+..+++++.+++.+||..+|++||++.++.+.|+.+
T Consensus       180 Di~slG~~l~el~~~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         180 DVWSYGITMWEAFSYGQKPYK-KMKGPEVMSFIEQGK---RLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             hHHHHHHHHHHHhcCCCCCcC-cCCHHHHHHHHHCCC---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            99999999999996 655543 333333332222221   1112234567899999999999999999999999999876


Q ss_pred             h
Q 043958          160 Y  160 (163)
Q Consensus       160 ~  160 (163)
                      +
T Consensus       256 ~  256 (257)
T cd05115         256 Y  256 (257)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=2.2e-31  Score=192.95  Aligned_cols=147  Identities=16%  Similarity=0.185  Sum_probs=109.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||+++........   ....++..|+|||.+.+..++.++|
T Consensus       131 qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~D  204 (359)
T cd07876         131 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMM---TPYVVTRYYRAPEVILGMGYKENVD  204 (359)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccC---CCCcccCCCCCchhccCCCCCcchh
Confidence            7899999999   899999999999999999999999999998654332211   1335788999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhcc---c-----------h-------hhhhhhccc----------------chhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIV---D-----------P-------VIREELCIQ----------------SSEK  124 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~---~-----------~-------~~~~~~~~~----------------~~~~  124 (163)
                      +||+|++++++++|..||..........   .           .       .........                ....
T Consensus       205 iwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (359)
T cd07876         205 IWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERD  284 (359)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccc
Confidence            9999999999999988876443211100   0           0       000000000                0001


Q ss_pred             HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          125 DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       125 ~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...+..+++++.+||..||++|||+.++++
T Consensus       285 ~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         285 KLKTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             cccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence            112467899999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=1e-31  Score=194.39  Aligned_cols=147  Identities=17%  Similarity=0.189  Sum_probs=110.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||+++........   ....++..|+|||.+.+..++.++|
T Consensus       127 qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~D  200 (355)
T cd07874         127 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVD  200 (355)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCcccccCCCcccc---CCccccCCccCHHHHcCCCCCchhh
Confidence            7899999999   899999999999999999999999999999765433221   1346888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhh----------------------hhhc----------------ccchh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR----------------------EELC----------------IQSSE  123 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~----------------~~~~~  123 (163)
                      +||+|+++++++++..||......... .....                      ....                .....
T Consensus       201 iwslG~il~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (355)
T cd07874         201 IWSVGCIMGEMVRHKILFPGRDYIDQW-NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH  279 (355)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccc
Confidence            999999999999998887543322111 00000                      0000                00000


Q ss_pred             hHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958          124 KDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       124 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      ....+..+++++.+||+.||++|||+.++++.
T Consensus       280 ~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         280 NKLKASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             ccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            11124578999999999999999999999873

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=1.7e-31  Score=189.48  Aligned_cols=153  Identities=21%  Similarity=0.278  Sum_probs=115.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.+|++|||+++...............++..|++||.+.+..++.++|
T Consensus       117 qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (303)
T cd05110         117 QIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSD  193 (303)
T ss_pred             HHHHHHHHHh---hcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHH
Confidence            7899999999   8999999999999999999999999999997665433222222233566899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||++++++++ +..|+. .....+..+...... .+  +....++..+.+++..||..+|++||++.++++.|+++.
T Consensus       194 iwslG~~l~el~t~g~~p~~-~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         194 VWSYGVTIWELMTFGGKPYD-GIPTREIPDLLEKGE-RL--PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHCCC-CC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999997 555543 322222222221111 11  112234568899999999999999999999999999875


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       270 ~  270 (303)
T cd05110         270 R  270 (303)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=3e-31  Score=190.24  Aligned_cols=143  Identities=18%  Similarity=0.283  Sum_probs=112.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.+||+|||+++........  .....|+..|+|||.+.+..++.++|
T Consensus       103 qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (328)
T cd05593         103 EIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  177 (328)
T ss_pred             HHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccc--cccccCCcCccChhhhcCCCCCccCC
Confidence            7899999999   899999999999999999999999999998654322211  12345889999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|++++++++|..||... ...+............    ....+..+.+++.+||..||++|+     ++.++++
T Consensus       178 iwslGvil~elltG~~Pf~~~-~~~~~~~~~~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         178 WWGLGVVMYEMMCGRLPFYNQ-DHEKLFELILMEDIKF----PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             ccccchHHHHHhhCCCCCCCC-CHHHHHHHhccCCccC----CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            999999999999998887543 2333333333322212    123457899999999999999997     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=2e-31  Score=186.26  Aligned_cols=150  Identities=17%  Similarity=0.243  Sum_probs=112.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........   ......+..|+|||.+.+..++.++|
T Consensus       120 ~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~~---~~~~~~~~~y~apE~~~~~~~~~~~D  193 (270)
T cd05047         120 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSD  193 (270)
T ss_pred             HHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCCCccccchhhh---ccCCCCccccCChHHHccCCCCchhh
Confidence            6889999999   89999999999999999999999999999753221111   11112345799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||++++++++ +..|+. .....+.........   ........+.++.+++.+||+.+|.+|||+.++++.|++++
T Consensus       194 i~slG~il~el~~~g~~pf~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         194 VWSYGVLLWEIVSLGGTPYC-GMTCAELYEKLPQGY---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHHHHHHHHHHcCCCCCcc-ccCHHHHHHHHhCCC---CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            9999999999997 666553 333333333222211   11112234567999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       270 ~  270 (270)
T cd05047         270 E  270 (270)
T ss_pred             C
Confidence            3

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.97  E-value=2.4e-31  Score=191.79  Aligned_cols=155  Identities=17%  Similarity=0.281  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       187 qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  263 (343)
T cd05103         187 QVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  263 (343)
T ss_pred             HHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654332222221233556799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+................. ..  ......++.+.+++..||+.+|++|||+.++++.|+.++
T Consensus       264 i~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         264 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT-RM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC-CC--CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999997 5555443222222222111111 11  111124567999999999999999999999999999987


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       341 ~~  342 (343)
T cd05103         341 QA  342 (343)
T ss_pred             hc
Confidence            63

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=2.1e-31  Score=186.19  Aligned_cols=152  Identities=18%  Similarity=0.302  Sum_probs=115.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||+++...............++..|++||.+.+..++.++|
T Consensus       121 ~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sD  197 (273)
T cd05074         121 DIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSD  197 (273)
T ss_pred             HHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhh
Confidence            7889999999   8999999999999999999999999999987664433222222223456799999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|+++++++++..+++......+..........   .......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       198 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         198 VWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR---LKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            999999999999855554444433333332222211   111123557899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=1.4e-31  Score=187.74  Aligned_cols=150  Identities=19%  Similarity=0.247  Sum_probs=112.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC---CeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +++++|+||||+||+++.++   .++++|||+++................+..|+|||.+.+..++.
T Consensus       124 qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  200 (277)
T cd05036         124 DVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTS  200 (277)
T ss_pred             HHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCc
Confidence            7899999999   89999999999999998665   58999999997664332221111223456799999998888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      ++|+||+|++++++++....++......+....+.....   .......+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       201 ~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         201 KTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGR---LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            999999999999999744444444444444433322211   1112334678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=1e-31  Score=199.10  Aligned_cols=146  Identities=18%  Similarity=0.261  Sum_probs=108.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      |++.||+|||   +++++||||||+||+++.++ .+||+|||+++.........   ...+++.|+|||.+.+. .++.+
T Consensus       178 qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~  251 (440)
T PTZ00036        178 QLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSV---SYICSRFYRAPELMLGATNYTTH  251 (440)
T ss_pred             HHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcc---cCCCCcCccCHHHhcCCCCCCcH
Confidence            7899999999   89999999999999998665 69999999997665433221   23578899999988764 58999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhh-----------------hhcccc--------hhhHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-----------------ELCIQS--------SEKDKQVQAFVEL  134 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~--------~~~~~~~~~~~~l  134 (163)
                      +|+||+||+++++++|..||......+.+.. +...                 ....+.        ......+.++.+|
T Consensus       252 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~-i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l  330 (440)
T PTZ00036        252 IDLWSLGCIIAEMILGYPIFSGQSSVDQLVR-IIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINF  330 (440)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCChHHHHHH-HHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHH
Confidence            9999999999999999877754433222111 1100                 000000        0011234689999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||..+|++|||+.++++
T Consensus       331 i~~~L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        331 ISQFLKYEPLKRLNPIEALA  350 (440)
T ss_pred             HHHHCCCChhHCcCHHHHhC
Confidence            99999999999999999985

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=2.7e-31  Score=184.14  Aligned_cols=150  Identities=22%  Similarity=0.317  Sum_probs=117.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++|+||+|+||+++.++.++++|||.+................++..|+|||.+....++.++|
T Consensus       113 ~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  189 (262)
T cd00192         113 QIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSD  189 (262)
T ss_pred             HHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhc
Confidence            7899999999   8999999999999999999999999999998776544222222345677899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      +||+|+++++++++..+++......++........   ........+.++.+++.+||..+|++|||+.++++.|+
T Consensus       190 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         190 VWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY---RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             cHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC---CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            99999999999986444444444444444433321   12223345788999999999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=2.4e-31  Score=190.42  Aligned_cols=143  Identities=18%  Similarity=0.313  Sum_probs=111.5

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   + ++++||||||+||+++.++.++|+|||++..........  ....|+..|+|||.+.+..++.++
T Consensus       103 qi~~aL~~lH---~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~  177 (325)
T cd05594         103 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCGTPEYLAPEVLEDNDYGRAV  177 (325)
T ss_pred             HHHHHHHHHH---hcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccc--ccccCCcccCCHHHHccCCCCCcc
Confidence            7899999999   6 799999999999999999999999999986543222211  133588999999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      |+||+|++++++++|..|+.... ..+....+.......    ....++.+.+++.+||+.||++|+     ++.++++
T Consensus       178 DiwslG~il~el~tG~~Pf~~~~-~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         178 DWWGLGVVMYEMMCGRLPFYNQD-HEKLFELILMEEIRF----PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             ccccccceeeeeccCCCCCCCCC-HHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            99999999999999988875432 233333333222212    123457899999999999999997     8888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=3.5e-31  Score=184.10  Aligned_cols=149  Identities=23%  Similarity=0.293  Sum_probs=114.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........... ....++..|++||...+..++.++|
T Consensus       110 ~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~Pe~~~~~~~~~~~D  185 (260)
T cd05069         110 QIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc-CCCccchhhCCHHHhccCCcChHHH
Confidence            7899999999   89999999999999999999999999999976643322111 1223566799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+. .....+........ .  ..+.....+..+.+++.+||+.+|++||+++++++.|++
T Consensus       186 i~slG~~l~el~t~g~~p~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         186 VWSFGILLTELVTKGRVPYP-GMVNREVLEQVERG-Y--RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcC-C--CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            9999999999998 555543 33333333332221 1  112223456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=2.4e-31  Score=184.87  Aligned_cols=150  Identities=23%  Similarity=0.307  Sum_probs=114.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++............ ...++..|+|||...+..++.++|
T Consensus       110 ~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~D  185 (260)
T cd05070         110 QVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccccc-CCCCCccccChHHHhcCCCcchhh
Confidence            7899999999   899999999999999999999999999999766443222111 223456799999988888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||||+++++++++..+++......+..+.....   ...+.....+..+.+++.+||..+|++|||+.++.+.|++
T Consensus       186 i~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         186 VWSFGILLTELVTKGRVPYPGMNNREVLEQVERG---YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC---CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9999999999998444444343333333333222   1112233456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=3.8e-31  Score=185.93  Aligned_cols=154  Identities=22%  Similarity=0.355  Sum_probs=115.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++++|||++........... .....++..|++||.+.+..++.++
T Consensus       115 ~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~  191 (283)
T cd05080         115 QICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYAS  191 (283)
T ss_pred             HHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCccc
Confidence            7899999999   89999999999999999999999999999876654332211 1122345579999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccc-hhhccchhh------------hhhhcccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNT-FDEIVDPVI------------REELCIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~-~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      |+||+|+++++++++..|+..... ..+......            ...  ...+.....+..+.+++.+||+.+|++||
T Consensus       192 Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  269 (283)
T cd05080         192 DVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG--MRLPCPKNCPQEVYILMKNCWETEAKFRP  269 (283)
T ss_pred             ccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC--CCCCCCCCCCHHHHHHHHHHhccChhhCC
Confidence            999999999999998877543211 111111000            000  01111223567899999999999999999


Q ss_pred             CHHHHHHHHHHHh
Q 043958          148 TMIDVAKQLRQAY  160 (163)
Q Consensus       148 t~~~i~~~L~~~~  160 (163)
                      |+.++++.|+.+.
T Consensus       270 s~~~i~~~l~~~~  282 (283)
T cd05080         270 TFRSLIPILKEMH  282 (283)
T ss_pred             CHHHHHHHHHHhh
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.8e-31  Score=183.93  Aligned_cols=151  Identities=19%  Similarity=0.281  Sum_probs=114.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++++|||++............ ....+..|+|||.+.+..++.++|
T Consensus       111 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~D  186 (261)
T cd05068         111 QVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEARE-GAKFPIKWTAPEAALYNRFSIKSD  186 (261)
T ss_pred             HHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccC-CCcCceeccCccccccCCCCchhh
Confidence            6889999999   899999999999999999999999999998776532221111 112345799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|+++++++++..+++......++...+... ...  +.....+..+.+++.+|++.+|++||++.++.+.|+.+
T Consensus       187 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRM--PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCC--CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            9999999999998434444343333333332222 111  12234567899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=2.7e-31  Score=188.44  Aligned_cols=152  Identities=14%  Similarity=0.259  Sum_probs=114.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||++................++..|+|||.+.+..++.++|
T Consensus       149 ~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  225 (302)
T cd05055         149 QVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  225 (302)
T ss_pred             HHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhH
Confidence            7899999999   8999999999999999999999999999987665433221222234567899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|++++++++ +..|+........ ...........  ......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       226 iwslGvil~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         226 VWSYGILLWEIFSLGSNPYPGMPVDSK-FYKLIKEGYRM--AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCCCchHH-HHHHHHcCCcC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            9999999999998 6666543322222 11111111111  11123456899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=8.4e-32  Score=189.37  Aligned_cols=145  Identities=21%  Similarity=0.279  Sum_probs=113.1

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC------CCeEECccccccccCCCCCcccccCccccccccCccccccC
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED------HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~   74 (163)
                      .|++.||++||   +++|+||||||+|||++..      -.+||+|||+++....+....   +..|++.|||||++..+
T Consensus       116 ~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~---tlcGSplYMAPEV~~~~  189 (429)
T KOG0595|consen  116 QQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAE---TLCGSPLYMAPEVIMSQ  189 (429)
T ss_pred             HHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHH---HhhCCccccCHHHHHhc
Confidence            38999999999   9999999999999999765      457999999999987554433   44699999999999999


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      +|+.|+|+||+|+++|++++|..||. .....+++..+..+....+.. ....++...+++...+..++.+|.++.+-.
T Consensus       190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~-a~t~~eL~~~~~k~~~~~~~~-~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~  266 (429)
T KOG0595|consen  190 QYDAKADLWSIGTILYQCLTGKPPFD-AETPKELLLYIKKGNEIVPVL-PAELSNPLRELLISLLQRNPKDRISFEDFF  266 (429)
T ss_pred             cccchhhHHHHHHHHHHHHhCCCCcc-ccCHHHHHHHHhccccccCch-hhhccCchhhhhhHHHhcCccccCchHHhh
Confidence            99999999999999999999987765 556666666555444332222 224455566777777778877777765543

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=2.3e-31  Score=187.57  Aligned_cols=153  Identities=18%  Similarity=0.302  Sum_probs=116.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++++|||+++...............++..|++||.+.++.++.++|
T Consensus       127 ~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  203 (288)
T cd05061         127 EIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSD  203 (288)
T ss_pred             HHHHHHHHHH---hCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhH
Confidence            6889999999   8999999999999999999999999999987654332222221223456799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..+++......+...........   ......++.+.+++.+||+.+|++|||+.++++.|++..
T Consensus       204 vwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         204 MWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYL---DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            9999999999998544444343333333333222211   111234578999999999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.3e-31  Score=191.12  Aligned_cols=145  Identities=18%  Similarity=0.196  Sum_probs=112.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++.....     ......|+..|+|||.+.+..++.++|
T Consensus       109 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~D  180 (333)
T cd05600         109 EMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVD  180 (333)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccc
Confidence            7899999999   89999999999999999999999999999865543     112346889999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchh----hHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSE----KDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++++++++..|+... ...+....+.........+.    ....+.++.+++.+||..+|++||++.++++.
T Consensus       181 vwslG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         181 YWSLGCMLYEFLCGFPPFSGS-TPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             eecchHHHhhhhhCCCCCCCC-CHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            999999999999998887543 33333222222111111111    12346789999999999999999999999863

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.97  E-value=1e-31  Score=196.03  Aligned_cols=143  Identities=20%  Similarity=0.329  Sum_probs=123.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |+++||.|||   +.+|+|||+||.|||++.+|.+|++|||+++.+..+..-.  ....||+.|||||...+++|+..+|
T Consensus       108 ~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl--tsikGtPlYmAPElv~e~pyd~~sD  182 (808)
T KOG0597|consen  108 DLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL--TSIKGTPLYMAPELVEEQPYDHTSD  182 (808)
T ss_pred             HHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccCceee--eeccCcccccCHHHHcCCCccchhh
Confidence            6789999999   9999999999999999999999999999999887643322  2557999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+||++||++.|.+||+ .....+++..+...+...+    ...+..+.++++..+.+||..|.|..+++.
T Consensus       183 lWslGcilYE~~~G~PPF~-a~si~~Lv~~I~~d~v~~p----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  183 LWSLGCILYELYVGQPPFY-ARSITQLVKSILKDPVKPP----STASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHHHHHHHhcCCCCch-HHHHHHHHHHHhcCCCCCc----ccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            9999999999999988876 5566677777777654332    267789999999999999999999988875

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.97  E-value=1.6e-31  Score=185.23  Aligned_cols=149  Identities=17%  Similarity=0.176  Sum_probs=113.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +++|+|||+||+|++++++|.+|++|||+|+........  ......|.+|.|||.+.+. .|+...
T Consensus       128 Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~--yt~evvTlWYRaPEvLlGs~~Ys~~v  202 (323)
T KOG0594|consen  128 QLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRT--YTPEVVTLWYRAPEVLLGSTSYSTSV  202 (323)
T ss_pred             HHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccchHHHhcCCccc--ccccEEEeeccCHHHhcCCCcCCCCc
Confidence            8999999999   999999999999999999999999999999865533332  2245789999999999886 589999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhh-----------------hhhhcc-cch-------hhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVI-----------------REELCI-QSS-------EKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~-~~~-------~~~~~~~~~~~li  135 (163)
                      |+||+||+++|++++...|......+++.....                 ..+..+ ...       ..........+++
T Consensus       203 DiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll  282 (323)
T KOG0594|consen  203 DIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELL  282 (323)
T ss_pred             chHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHH
Confidence            999999999999998877765544333221100                 000000 000       1111225789999


Q ss_pred             HhccccCcCCCCCHHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      .+|++++|.+|.|+..++..
T Consensus       283 ~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  283 SKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HHHhccCcccCcCHHHHhcC
Confidence            99999999999999998874

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=2.2e-31  Score=191.13  Aligned_cols=145  Identities=21%  Similarity=0.212  Sum_probs=109.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+|||++.++.++|+|||+++.......... ....|+..|+|||.+.+.. ++.++
T Consensus       113 qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~  188 (332)
T cd05614         113 EIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERT-YSFCGTIEYMAPEIIRGKGGHGKAV  188 (332)
T ss_pred             HHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcc-ccccCCccccCHHHhcCCCCCCCcc
Confidence            7899999999   89999999999999999999999999999876543322221 1346889999999987654 78899


Q ss_pred             ceeecchhhHHHhhhccccccccc---hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDV  152 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i  152 (163)
                      ||||+|++++++++|..|+.....   ...+.........    ......+..+.+++.+||+.||++||     ++.++
T Consensus       189 DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~  264 (332)
T cd05614         189 DWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEI  264 (332)
T ss_pred             ccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHH
Confidence            999999999999999888753221   1112122222111    11223567889999999999999999     66677


Q ss_pred             HH
Q 043958          153 AK  154 (163)
Q Consensus       153 ~~  154 (163)
                      ++
T Consensus       265 l~  266 (332)
T cd05614         265 KE  266 (332)
T ss_pred             Hc
Confidence            64

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=3.3e-31  Score=186.59  Aligned_cols=146  Identities=16%  Similarity=0.174  Sum_probs=108.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++.........   ....++..|+|||.+.+..++.++|
T Consensus       116 qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~D  189 (288)
T cd07863         116 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMAL---TPVVVTLWYRAPEVLLQSTYATPVD  189 (288)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCccccccCcccC---CCccccccccCchHhhCCCCCCcch
Confidence            7899999999   899999999999999999999999999998765433221   1235788999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhh-------h-----------hcc-----cchhhHHHHHHHHHHHHhc
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------E-----------LCI-----QSSEKDKQVQAFVELAVKC  138 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------~-----------~~~-----~~~~~~~~~~~~~~li~~c  138 (163)
                      +||+|+++++++++..++......+ ........       .           ...     ........+..+.+++.+|
T Consensus       190 iwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  268 (288)
T cd07863         190 MWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM  268 (288)
T ss_pred             hhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence            9999999999998876654332211 11111000       0           000     0001123456789999999


Q ss_pred             cccCcCCCCCHHHHHH
Q 043958          139 VSESAEDRPTMIDVAK  154 (163)
Q Consensus       139 l~~~p~~Rpt~~~i~~  154 (163)
                      ++.||++|||+.+++.
T Consensus       269 L~~dP~~R~t~~~~l~  284 (288)
T cd07863         269 LTFNPHKRISAFRALQ  284 (288)
T ss_pred             hccCcccCCCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.2e-31  Score=192.24  Aligned_cols=148  Identities=20%  Similarity=0.293  Sum_probs=113.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCC---------------------------Ccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---------------------------THI   54 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------~~~   54 (163)
                      |++.||+|||   .++++||||||+||+++.++.++|+|||++.......                           ...
T Consensus       109 qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (350)
T cd05573         109 ELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRV  185 (350)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccc
Confidence            7899999999   8999999999999999999999999999987655433                           001


Q ss_pred             cccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHH
Q 043958           55 KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVEL  134 (163)
Q Consensus        55 ~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  134 (163)
                      ......|+..|+|||.+.+..++.++||||+||+++++++|..|+..... .+....+.........+.....++.+.++
T Consensus       186 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~~~~~p~~~~~~~~~~~l  264 (350)
T cd05573         186 RANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL-QETYNKIINWKESLRFPPDPPVSPEAIDL  264 (350)
T ss_pred             cccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH-HHHHHHHhccCCcccCCCCCCCCHHHHHH
Confidence            11234688999999999988999999999999999999999988765442 22222222211111122222256889999


Q ss_pred             HHhccccCcCCCCC-HHHHHH
Q 043958          135 AVKCVSESAEDRPT-MIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt-~~~i~~  154 (163)
                      +.+|+. +|.+||+ +.++++
T Consensus       265 i~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         265 ICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             HHHHcc-ChhhcCCCHHHHhc
Confidence            999997 9999999 999986

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=3e-31  Score=190.29  Aligned_cols=140  Identities=18%  Similarity=0.261  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++........     ...|++.|+|||.+.+..++.++|
T Consensus       126 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~D  197 (329)
T PTZ00263        126 ELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTF-----TLCGTPEYLAPEVIQSKGHGKAVD  197 (329)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcc-----eecCChhhcCHHHHcCCCCCCcce
Confidence            7899999999   89999999999999999999999999999976643321     235888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||+|+++|++++|..||.... ..+....+..+....    +...+..+.+++.+||+.||.+|++     +.+++.
T Consensus       198 iwslG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        198 WWTMGVLLYEFIAGYPPFFDDT-PFRIYEKILAGRLKF----PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             eechHHHHHHHHcCCCCCCCCC-HHHHHHHHhcCCcCC----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            9999999999999988876433 233333333333221    1224567899999999999999997     566664

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=3.5e-31  Score=187.94  Aligned_cols=150  Identities=17%  Similarity=0.248  Sum_probs=112.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++........   ......+..|+|||.+.+..++.++|
T Consensus       132 qi~~al~~LH---~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  205 (303)
T cd05088         132 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVK---KTMGRLPVRWMAIESLNYSVYTTNSD  205 (303)
T ss_pred             HHHHHHHHHH---hCCccccccchheEEecCCCcEEeCccccCcccchhhh---cccCCCcccccCHHHHhccCCccccc
Confidence            7899999999   89999999999999999999999999999853221111   11122355799999988888899999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+........   .........+..+.+++.+||+.+|++||++.+++..|+++.
T Consensus       206 i~slG~il~ellt~g~~p~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         206 VWSYGVLLWEIVSLGGTPYC-GMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             chhhhhHHHHHHhcCCCCcc-cCChHHHHHHHhcC---CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999998 655553 33323332222111   111112234568999999999999999999999999998876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       282 ~  282 (303)
T cd05088         282 E  282 (303)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=2.5e-31  Score=193.39  Aligned_cols=148  Identities=14%  Similarity=0.191  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG----DYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~----~~~   77 (163)
                      |++.||+|||   +++++||||||+|||++.++.++|+|||++........... ....|++.|+|||.+.+.    .++
T Consensus       150 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~  225 (370)
T cd05596         150 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRC-DTAVGTPDYISPEVLKSQGGDGYYG  225 (370)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccC-CCCCCCcCeECHHHhccCCCCCCCC
Confidence            7899999999   89999999999999999999999999999876543322111 234689999999988653    378


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCC--CCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAED--RPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~--Rpt~~~i~~  154 (163)
                      .++|+||+||+++++++|..||.... .......+.........+.....+..+.+++.+||..+|.+  |+|+.++++
T Consensus       226 ~~~DiwSlGvilyelltG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         226 RECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             CceeeeehhHHHHHHHhCCCCcCCCC-HHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            89999999999999999988876433 23333333332222222333345788999999999999987  999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=3.8e-31  Score=183.53  Aligned_cols=152  Identities=20%  Similarity=0.317  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   ..+++|+||||+||+++.++.++++|||+++.......... .....++..|+|||.+.+..++.++
T Consensus       103 qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  179 (257)
T cd05060         103 QVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKS  179 (257)
T ss_pred             HHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccc
Confidence            7899999999   89999999999999999999999999999876644332211 1111234579999999888899999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||||++++++++ +..|+. .....++...+....   .......++..+.+++.+||..+|++||++.++++.|+++
T Consensus       180 Di~slG~~l~~~~~~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         180 DVWSYGVTLWEAFSYGAKPYG-EMKGAEVIAMLESGE---RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             hHHHHHHHHHHHHcCCCCCcc-cCCHHHHHHHHHcCC---cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            99999999999998 555543 333333333322221   1122234567899999999999999999999999999986


Q ss_pred             h
Q 043958          160 Y  160 (163)
Q Consensus       160 ~  160 (163)
                      .
T Consensus       256 ~  256 (257)
T cd05060         256 P  256 (257)
T ss_pred             c
Confidence            4

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=2.3e-31  Score=194.94  Aligned_cols=150  Identities=21%  Similarity=0.178  Sum_probs=112.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++|+|||++................|+..|+|||.+.+..++.++|
T Consensus       193 ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  269 (392)
T PHA03207        193 RLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTD  269 (392)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999997665443332222456899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchh--hccchhhhh---------------------hh----cccch-----hhHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFD--EIVDPVIRE---------------------EL----CIQSS-----EKDKQVQ  129 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~---------------------~~----~~~~~-----~~~~~~~  129 (163)
                      +||+||++|+++++..|++......  ..+..+...                     .+    .....     .....+.
T Consensus       270 vwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (392)
T PHA03207        270 IWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHM  349 (392)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcch
Confidence            9999999999999999886533210  000000000                     00    00000     0012346


Q ss_pred             HHHHHHHhccccCcCCCCCHHHHHH
Q 043958          130 AFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       130 ~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+++.+||..+|++|||+.+++.
T Consensus       350 ~~~~li~~ml~~dp~~Rpsa~e~l~  374 (392)
T PHA03207        350 DVEYLIAKMLTFDQEFRPSAQDILS  374 (392)
T ss_pred             hHHHHHHHHhccChhhCCCHHHHhh
Confidence            7889999999999999999999986

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=3e-31  Score=191.90  Aligned_cols=146  Identities=16%  Similarity=0.252  Sum_probs=109.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      ||+.||+|||   +.+++||||||+||+++.++.+||+|||++..........  ....|+..|+|||.+..     ...
T Consensus       176 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~  250 (353)
T PLN00034        176 QILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPC--NSSVGTIAYMSPERINTDLNHGAYD  250 (353)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccc--cccccCccccCccccccccccCcCC
Confidence            7899999999   8999999999999999999999999999987664332211  13468899999998743     223


Q ss_pred             CcccceeecchhhHHHhhhcccccccc--chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECN--TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|||||||++|+++++..||....  ............   .........+.++.+++.+||+.+|++|||+.++++
T Consensus       251 ~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        251 GYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS---QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             CcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc---CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            468999999999999999998875222  111111111111   111222345678999999999999999999999987


Q ss_pred             H
Q 043958          155 Q  155 (163)
Q Consensus       155 ~  155 (163)
                      .
T Consensus       328 h  328 (353)
T PLN00034        328 H  328 (353)
T ss_pred             C
Confidence            3

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=2.8e-31  Score=190.15  Aligned_cols=142  Identities=23%  Similarity=0.272  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++.........  .....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (325)
T cd05602         104 EIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGT--TSTFCGTPEYLAPEVLHKQPYDRTVD  178 (325)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCC--cccccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998654322211  12346889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      +||+|+++++++++..|+.... ..+....+......    .....+..+.+++.+|++.+|.+|+++.+.+
T Consensus       179 iwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~  245 (325)
T cd05602         179 WWCLGAVLYEMLYGLPPFYSRN-TAEMYDNILNKPLQ----LKPNITNSARHLLEGLLQKDRTKRLGAKDDF  245 (325)
T ss_pred             cccccHHHHHHhcCCCCCCCCC-HHHHHHHHHhCCcC----CCCCCCHHHHHHHHHHcccCHHHCCCCCCCH
Confidence            9999999999999988876433 33333333332211    1224567899999999999999999876443

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.97  E-value=3.1e-31  Score=184.29  Aligned_cols=150  Identities=22%  Similarity=0.292  Sum_probs=115.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||.+...........  ...++..|++||...+..++.++|
T Consensus       112 ~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~PE~~~~~~~~~~~D  186 (261)
T cd05148         112 QVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSS--DKKIPYKWTAPEAASHGTFSTKSD  186 (261)
T ss_pred             HHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccccc--CCCCceEecCHHHHccCCCCchhh
Confidence            7899999999   89999999999999999999999999999976644322211  223566799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|+++++++++...++......+........   ...+....++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       187 iwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         187 VWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG---YRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhC---CcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            9999999999998444433333333444433322   11222335567899999999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=4e-31  Score=189.23  Aligned_cols=143  Identities=20%  Similarity=0.305  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++.........  .....|+..|+|||.+.+..++.++|
T Consensus       103 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  177 (323)
T cd05595         103 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  177 (323)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCc--cccccCCcCcCCcccccCCCCCchhc
Confidence            7899999999   899999999999999999999999999998653322211  11345888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|+++++++++..|+... ................    ....++.+.+++.+||+.||++|+     ++.++++
T Consensus       178 iwSlGvil~ell~g~~Pf~~~-~~~~~~~~~~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         178 WWGLGVVMYEMMCGRLPFYNQ-DHERLFELILMEEIRF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            999999999999998887543 2333333333322211    123467899999999999999998     7877765

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=1.4e-31  Score=197.80  Aligned_cols=154  Identities=16%  Similarity=0.249  Sum_probs=129.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||.+|+.||.   .+++||||+-+.|+|++++..+||+|||+++.|......... -..-...|.|||-+....++.|+|
T Consensus       373 QIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA-GAKFPIKWTAPEsLAyNtFSiKSD  448 (1157)
T KOG4278|consen  373 QISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYNTFSIKSD  448 (1157)
T ss_pred             HHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc-CccCcccccCcccccccccccchh
Confidence            7899999999   999999999999999999999999999999999766544332 112235799999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      ||+||+++||+.+....++......+++.. +...  .++..++.|++.+.+|+..||+..|++||++.++-+.|+.++.
T Consensus       449 VWAFGVLLWEIATYGMsPYPGidlSqVY~L-LEkg--yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  449 VWAFGVLLWEIATYGMSPYPGIDLSQVYGL-LEKG--YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCccHHHHHHH-Hhcc--ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            999999999999876666656666655543 3333  4556667899999999999999999999999999999999986


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      +
T Consensus       526 ~  526 (1157)
T KOG4278|consen  526 S  526 (1157)
T ss_pred             c
Confidence            4

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=8.4e-31  Score=182.63  Aligned_cols=152  Identities=17%  Similarity=0.254  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       114 ~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~D  188 (267)
T cd08229         114 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCccc--ccccCCcCccCHHHhcCCCccchhh
Confidence            7899999999   8999999999999999999999999999987664433221  1235778899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccc-hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT-FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..|+..... ............  .........+..+.+++.+||+.+|++|||+.++++.++++.
T Consensus       189 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         189 IWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--CCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            99999999999999888753321 122222222211  111122346678999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=7.3e-31  Score=187.83  Aligned_cols=143  Identities=21%  Similarity=0.268  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||+++.........  ....|+..|+|||.+.+..++.++|
T Consensus       108 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  182 (323)
T cd05584         108 EISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVT--HTFCGTIEYMAPEILMRSGHGKAVD  182 (323)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcc--cccCCCccccChhhccCCCCCCcce
Confidence            7899999999   8999999999999999999999999999986543322211  1345889999999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      |||+|++++++++|..||.... ...............    +...+..+.+++.+||+.+|++||     ++.++++
T Consensus       183 iwslG~il~ell~G~~pf~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         183 WWSLGALMYDMLTGAPPFTAEN-RKKTIDKILKGKLNL----PPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             ecccHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            9999999999999988875433 233333333332211    223457899999999999999999     7777765

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=4.6e-31  Score=188.71  Aligned_cols=143  Identities=15%  Similarity=0.245  Sum_probs=112.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++|+|||++..........  ....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  178 (321)
T cd05591         104 EVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT--TTFCGTPDYIAPEILQELEYGPSVD  178 (321)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCccc--cccccCccccCHHHHcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999986543322211  1345888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-------CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-------TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-------t~~~i~~  154 (163)
                      +||+|+++|++++|..|+... ...+....+.......+    ...+.++.+++.+||+.+|++|+       ++.++++
T Consensus       179 vwslG~il~el~tg~~Pf~~~-~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         179 WWALGVLMYEMMAGQPPFEAD-NEDDLFESILHDDVLYP----VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             eechhHHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            999999999999998877533 33444444443332211    22457899999999999999999       7777764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=2e-31  Score=191.18  Aligned_cols=147  Identities=20%  Similarity=0.296  Sum_probs=111.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc------cCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT------TGD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~------~~~   75 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++........... ....++..|+|||.+.      ...
T Consensus       110 qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~  185 (330)
T cd05601         110 ELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS-KLPVGTPDYIAPEVLTTMNGDGKGT  185 (330)
T ss_pred             HHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee-ecccCCccccCHHHhccccccccCC
Confidence            7899999999   89999999999999999999999999999977654433221 2346888999999986      345


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++|+||+|+++++++++..||..... ......+.........+.....+..+.+++..|+. +|.+|||+.+++.
T Consensus       186 ~~~~~DiwslG~il~el~~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         186 YGVECDWWSLGVIAYEMIYGRSPFHEGTS-AKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             CCCcceeecccceeeeeccCCCCCCCCCH-HHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            78899999999999999999888754332 22222222221111222223456789999999997 9999999999875

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=5.3e-31  Score=188.05  Aligned_cols=142  Identities=23%  Similarity=0.320  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++|
T Consensus       104 qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05592         104 EIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEG--KASTFCGTPDYIAPEILKGQKYNESVD  178 (316)
T ss_pred             HHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCC--ccccccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   89999999999999999999999999999875433221  112345889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH-HHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI-DVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-~i~  153 (163)
                      +||+|++++++++|..|+... ...++...+.....    ......+..+.+++.+||+.+|++||++. +++
T Consensus       179 vwslG~il~ell~G~~Pf~~~-~~~~~~~~i~~~~~----~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         179 WWSFGVLLYEMLIGQSPFHGE-DEDELFDSILNDRP----HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             chhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCC----CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            999999999999998887543 33333333322221    11223456789999999999999999875 454

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-31  Score=181.53  Aligned_cols=132  Identities=21%  Similarity=0.304  Sum_probs=116.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +..|++||+||+|||+|++|.+||.|||+++.....     +.+..||+.|+|||.+...+++.++|
T Consensus       152 eivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-----T~TlCGTPeYLAPEii~sk~ynkavD  223 (355)
T KOG0616|consen  152 EIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-----TWTLCGTPEYLAPEIIQSKGYNKAVD  223 (355)
T ss_pred             HHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-----EEEecCCccccChHHhhcCCCCcchh
Confidence            7899999999   999999999999999999999999999999877544     23456999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      -|+||+++|||+.|..||....+ ..++++++.++..++..    .++++++|+...++.|-.+|
T Consensus       224 WWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~~~v~fP~~----fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  224 WWALGVLIYEMLAGYPPFYDDNP-IQIYEKILEGKVKFPSY----FSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHhCcccCCcc----cCHHHHHHHHHHHhhhhHhh
Confidence            99999999999999888876655 67888898888655433    44789999999999999888

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=9e-31  Score=183.70  Aligned_cols=154  Identities=23%  Similarity=0.269  Sum_probs=118.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||+++...............++..|++||.+....++.++|
T Consensus       117 qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  193 (279)
T cd05057         117 QIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSD  193 (279)
T ss_pred             HHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhh
Confidence            7899999999   8999999999999999999999999999997765433222211222356799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+ ......++.+.......   .+....++..+.+++.+||..+|..||++.++++.|+++.
T Consensus       194 i~slG~~l~el~~~g~~p~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~  269 (279)
T cd05057         194 VWSYGVTVWELMTFGAKPY-EGIPAVEIPDLLEKGER---LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA  269 (279)
T ss_pred             HHHHHHHHHHHhcCCCCCC-CCCCHHHHHHHHhCCCC---CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            9999999999998 55554 34444444443333221   1112234567899999999999999999999999999886


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       270 ~~  271 (279)
T cd05057         270 RD  271 (279)
T ss_pred             hC
Confidence            53

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.7e-31  Score=194.00  Aligned_cols=148  Identities=16%  Similarity=0.243  Sum_probs=115.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-------   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-------   74 (163)
                      |++.++.++|   ..+|||.|+||.|+|+-+ |.+||+|||+|..+....+......+.||+.||+||.+...       
T Consensus       468 qML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~  543 (677)
T KOG0596|consen  468 QMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENG  543 (677)
T ss_pred             HHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCC
Confidence            7899999999   899999999999998854 57999999999999888777777788999999999988632       


Q ss_pred             ----CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           75 ----DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        75 ----~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                          +.+.++||||+||++|+|+++..||-.-.+...-+..+...+....++..... .++.++++.||..||.+|||+.
T Consensus       544 ~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~-~~li~~mK~CL~rdPkkR~si~  622 (677)
T KOG0596|consen  544 KSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN-DELIDVMKCCLARDPKKRWSIP  622 (677)
T ss_pred             CcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc-hHHHHHHHHHHhcCcccCCCcH
Confidence                25678999999999999999998876544333333333332221111211111 1399999999999999999999


Q ss_pred             HHHH
Q 043958          151 DVAK  154 (163)
Q Consensus       151 ~i~~  154 (163)
                      ++++
T Consensus       623 eLLq  626 (677)
T KOG0596|consen  623 ELLQ  626 (677)
T ss_pred             HHhc
Confidence            9986

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=4.4e-31  Score=191.72  Aligned_cols=146  Identities=18%  Similarity=0.190  Sum_probs=110.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||+++........   ....++..|+|||.+.+..++.++|
T Consensus       134 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~~D  207 (364)
T cd07875         134 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVD  207 (364)
T ss_pred             HHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcc---cCCcccCCcCCHHHHhCCCCCchhh
Confidence            7899999999   899999999999999999999999999999765433221   1335788999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhh----------------------hhcc----------------cchh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE----------------------ELCI----------------QSSE  123 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~----------------~~~~  123 (163)
                      +||+|++++++++|..||....... ....+...                      ....                ....
T Consensus       208 iwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (364)
T cd07875         208 IWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH  286 (364)
T ss_pred             HHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccc
Confidence            9999999999999988875433221 11111100                      0000                0000


Q ss_pred             hHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          124 KDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       124 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .......+++++.+|+..||++|||+.++++
T Consensus       287 ~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         287 NKLKASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             cccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0112356889999999999999999999987

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=4.2e-31  Score=187.51  Aligned_cols=148  Identities=16%  Similarity=0.208  Sum_probs=107.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++.........  .....++..|+|||.+.+. .++.++
T Consensus       111 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (303)
T cd07869         111 QLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHT--YSNEVVTLWYRPPDVLLGSTEYSTCL  185 (303)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCcc--CCCCcccCCCCChHHHcCCCCCCcHH
Confidence            7899999999   899999999999999999999999999998654322211  1133578899999988654 478899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh---------------------hhcccchh-------hHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE---------------------ELCIQSSE-------KDKQVQAFV  132 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~-------~~~~~~~~~  132 (163)
                      |+||+|++++++++|..||.......+.+......                     ......+.       ....+..+.
T Consensus       186 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (303)
T cd07869         186 DMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAE  265 (303)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHH
Confidence            99999999999999998876433322221111100                     00000000       001235688


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+||+.||++|||+.++++
T Consensus       266 dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         266 DLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHHHHhccCchhccCHHHHhc
Confidence            9999999999999999999986

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=4e-31  Score=189.16  Aligned_cols=139  Identities=21%  Similarity=0.275  Sum_probs=109.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++++||||||+||+++.++.++++|||++.........  .....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (323)
T cd05575         104 EIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKT--TSTFCGTPEYLAPEVLRKQPYDRTVD  178 (323)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCc--cccccCChhhcChhhhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998654322211  12345888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      +||+|+++++++++..||... ...++...+.......    ....+..+.+++.+||+.+|++||++.
T Consensus       179 vwslG~il~ell~g~~pf~~~-~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         179 WWCLGAVLYEMLYGLPPFYSR-DTAEMYDNILNKPLRL----KPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             ccccchhhhhhhcCCCCCCCC-CHHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            999999999999998887643 3334444433332211    123467899999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=5.2e-31  Score=188.41  Aligned_cols=138  Identities=19%  Similarity=0.266  Sum_probs=109.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++.........  .....|++.|+|||.+.+..++.++|
T Consensus       104 ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (320)
T cd05590         104 EITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKT--TSTFCGTPDYIAPEILQEMLYGPSVD  178 (320)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCc--ccccccCccccCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998654322211  12346889999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|++++++++|..|+... ...++...+.......    ....+..+.+++.+||+.||++||++
T Consensus       179 iwslG~il~el~~g~~Pf~~~-~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         179 WWAMGVLLYEMLCGHAPFEAE-NEDDLFEAILNDEVVY----PTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             hhhhHHHHHHHhhCCCCCCCC-CHHHHHHHHhcCCCCC----CCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            999999999999998887533 3333444433332211    12345788999999999999999998

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.97  E-value=8.5e-31  Score=185.33  Aligned_cols=153  Identities=14%  Similarity=0.272  Sum_probs=111.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++.................+..|++||...++.++.++|
T Consensus       138 ~i~~al~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  214 (296)
T cd05095         138 QIASGMKYLS---SLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASD  214 (296)
T ss_pred             HHHHHHHHHH---HCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhh
Confidence            7889999999   8999999999999999999999999999987654333222111223456799999888888999999


Q ss_pred             eeecchhhHHHhh--hccccccccchhhccchhhh---h-hhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLN--RVKKHIECNTFDEIVDPVIR---E-ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~--~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++|++++  +..|+. .....+.......   . ......+....++..+.+++.+||+.+|++||++.++.+.
T Consensus       215 iwSlG~~l~el~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  293 (296)
T cd05095         215 VWAFGVTLWEILTLCKEQPYS-QLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHAT  293 (296)
T ss_pred             hhHHHHHHHHHHHhCCCCCcc-ccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            9999999999997  334443 2222222211100   0 0000111122355789999999999999999999999998


Q ss_pred             HHH
Q 043958          156 LRQ  158 (163)
Q Consensus       156 L~~  158 (163)
                      |++
T Consensus       294 l~~  296 (296)
T cd05095         294 LLE  296 (296)
T ss_pred             HhC
Confidence            863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-31  Score=194.33  Aligned_cols=153  Identities=21%  Similarity=0.305  Sum_probs=122.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +++.||+|||   ++++|||||-+.|+|++.++.+|++|||+++....-....  ....-...|+|||.+..+.|+.++|
T Consensus       270 ~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~--~~~klPirWLAPEtl~~~~~s~kTD  344 (474)
T KOG0194|consen  270 DAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKK--FLKKLPIRWLAPETLNTGIFSFKTD  344 (474)
T ss_pred             HHHhHHHHHH---HCCCcchhHhHHHheecCCCeEEeCccccccCCcceeecc--ccccCcceecChhhhccCccccccc
Confidence            6889999999   9999999999999999999999999999986654111111  0113456899999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++||+++....|+......++...+....++.  +.+...+..+..++.+||..+|+.||++.++.+.|+.+..
T Consensus       345 V~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~--~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~  422 (474)
T KOG0194|consen  345 VWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM--PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK  422 (474)
T ss_pred             hhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC--CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence            99999999999985444555556666666665655443  3333677889999999999999999999999999998765

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=3.2e-31  Score=185.97  Aligned_cols=144  Identities=19%  Similarity=0.306  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++..........   ...++..|+|||.+.+..++.++|
T Consensus       103 qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~D  176 (277)
T cd05607         103 QITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTIT---QRAGTNGYMAPEILKEEPYSYPVD  176 (277)
T ss_pred             HHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceee---ccCCCCCccCHHHHccCCCCCchh
Confidence            7899999999   8999999999999999999999999999987665432221   235788999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccc---hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.....   ..++...........   .....+.++.+++.+||+.+|++||++.++++
T Consensus       177 vwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         177 WFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            99999999999999888653221   111222222211111   11245678999999999999999999976553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=4.2e-31  Score=186.16  Aligned_cols=150  Identities=19%  Similarity=0.291  Sum_probs=113.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   ..+++|+||||+||+++.++.++++|||++.................+..|+|||.+.+..++.++|
T Consensus       138 ~i~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (288)
T cd05050         138 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESD  214 (288)
T ss_pred             HHHHHHHHHH---hCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhH
Confidence            7889999999   8999999999999999999999999999987554332211111223456799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+. .....+...........   ......+.++.+++.+||+.+|++|||+.++++.|++
T Consensus       215 v~slG~il~el~~~~~~p~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         215 VWAYGVVLWEIFSYGMQPYY-GMAHEEVIYYVRDGNVL---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            9999999999997 445554 33333333333222211   1122356789999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=6.9e-31  Score=185.72  Aligned_cols=154  Identities=18%  Similarity=0.285  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.++.++.++|
T Consensus       137 ~i~~al~~lH---~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  213 (295)
T cd05097         137 QIASGMKYLA---SLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASD  213 (295)
T ss_pred             HHHHHHHHHH---hcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhh
Confidence            6889999999   8999999999999999999999999999987654332222222234567899999998888999999


Q ss_pred             eeecchhhHHHhhhcc-ccccccchhhccchhhh---h-hhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVK-KHIECNTFDEIVDPVIR---E-ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~-~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +||||+++++++++.. .++......+.......   . ............++.+.+++.+||+.+|++|||++++++.|
T Consensus       214 vwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l  293 (295)
T cd05097         214 VWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFL  293 (295)
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            9999999999987432 22222222222221111   0 00000111223457899999999999999999999999988


Q ss_pred             HH
Q 043958          157 RQ  158 (163)
Q Consensus       157 ~~  158 (163)
                      ++
T Consensus       294 ~~  295 (295)
T cd05097         294 RE  295 (295)
T ss_pred             hC
Confidence            63

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=1.1e-30  Score=181.22  Aligned_cols=148  Identities=19%  Similarity=0.270  Sum_probs=112.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++|+||+|+||+++.++.++++|||.+............ ...++..|+|||.+.+..++.++|
T Consensus       108 ~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~D  183 (256)
T cd05114         108 DVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSS-GAKFPVKWSPPEVFNFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccC-CCCCchhhCChhhcccCccchhhh
Confidence            7899999999   899999999999999999999999999998765433222111 223455799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +||+|++++++++...+++......+.+..+.......   .....+..+.+++.+||+.+|++||++.++++.|
T Consensus       184 i~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         184 VWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY---RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             hHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            99999999999994344444444444444433322111   1122356789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3.7e-31  Score=186.83  Aligned_cols=140  Identities=23%  Similarity=0.253  Sum_probs=111.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++++|||++.......     ....|++.|+|||.+.+..++.++|
T Consensus       109 qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  180 (291)
T cd05612         109 EIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT-----WTLCGTPEYLAPEVIQSKGHNKAVD  180 (291)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc-----ccccCChhhcCHHHHcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654322     1235888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      |||+|+++++++++..|+... ...+....+.......    ....+..+++++++||+.||.+||+     ++++++
T Consensus       181 iwSlG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         181 WWALGILIYEMLVGYPPFFDD-NPFGIYEKILAGKLEF----PRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCcCC----CccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            999999999999998887643 3333444443333222    1223568999999999999999995     777765

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.9e-31  Score=182.95  Aligned_cols=148  Identities=22%  Similarity=0.293  Sum_probs=111.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||+++........... ...++..|+|||.+.+..++.++|
T Consensus       108 qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~D  183 (256)
T cd05059         108 DVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQ-GTKFPVKWAPPEVFDYSRFSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceecccccccccC-CCCCCccccCHHHhccCCCCchhh
Confidence            7889999999   899999999999999999999999999998766433221111 112345799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +||+|+++|+++++..+++......+........ .  .......++.++.+++.+||..+|++|||+.++++.|
T Consensus       184 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         184 VWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-Y--RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-C--cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            9999999999998444444333333333332222 1  1112223577899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.8e-31  Score=195.78  Aligned_cols=151  Identities=15%  Similarity=0.139  Sum_probs=110.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++|+||||||+|||++.++.++|+|||+++...............||..|++||.+.+..++.++|
T Consensus       268 qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sD  344 (461)
T PHA03211        268 QLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVD  344 (461)
T ss_pred             HHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHH
Confidence            7899999999   8999999999999999999999999999997654332222222346899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccc------h-hhccchhhhhhhc----c--------------------------cchhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT------F-DEIVDPVIREELC----I--------------------------QSSEK  124 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~------~-~~~~~~~~~~~~~----~--------------------------~~~~~  124 (163)
                      ||||||++|+++.+..+++....      . ..+...+......    .                          .+...
T Consensus       345 vwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  424 (461)
T PHA03211        345 IWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY  424 (461)
T ss_pred             HHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhh
Confidence            99999999999987765543221      0 1111111110000    0                          00001


Q ss_pred             HHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958          125 DKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       125 ~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      ...+..+.+|+.+||+.||.+|||+.|+++.
T Consensus       425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        425 YKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             ccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence            1233578899999999999999999999873

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.97  E-value=7.5e-31  Score=187.27  Aligned_cols=142  Identities=18%  Similarity=0.266  Sum_probs=109.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++.........  .....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05620         104 EIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNR--ASTFCGTPDYIAPEILQGLKYTFSVD  178 (316)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCc--eeccCCCcCccCHHHHcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998643222111  12345889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH-HHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI-DVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-~i~  153 (163)
                      +||+|++++++++|..|+... ...++...+.......    ....+.++.+++.+||+.||++||++. +++
T Consensus       179 iwslGvil~el~~g~~Pf~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         179 WWSFGVLLYEMLIGQSPFHGD-DEDELFESIRVDTPHY----PRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             hhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCC----CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            999999999999998887533 3333333332222111    123456889999999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=3.2e-31  Score=186.92  Aligned_cols=147  Identities=13%  Similarity=0.155  Sum_probs=108.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +++++||||||+||+++.++.+||+|||+++.........  ....++..|+|||.+.+ ..++.++
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  185 (288)
T cd07871         111 QLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTY--SNEVVTLWYRPPDVLLGSTEYSTPI  185 (288)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccc--cCceecccccChHHhcCCcccCcHH
Confidence            7899999999   8999999999999999999999999999986543322111  12357889999998875 4588999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh-------------------hhccc-------chhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------ELCIQ-------SSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~-------~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..||....... .+......                   ....+       .......+.++.++
T Consensus       186 DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  264 (288)
T cd07871         186 DMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDL  264 (288)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHH
Confidence            99999999999999988775433221 11111000                   00000       00011235678999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+|+..||.+|||++++++
T Consensus       265 l~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         265 LSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             HHHhcCcCcccCCCHHHHhc
Confidence            99999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=5.9e-31  Score=192.84  Aligned_cols=153  Identities=20%  Similarity=0.280  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||.||+++.++.++++|||+++...............++..|++||.+.+..++.++|
T Consensus       247 qi~~aL~~LH---~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  323 (401)
T cd05107         247 QVANGMEFLA---SKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSD  323 (401)
T ss_pred             HHHHHHHHHh---cCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhH
Confidence            7899999999   8999999999999999999999999999997654332221111234677899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+... ...+...........+  ......+..+.+++.+||..+|+.||++.++++.|+++.
T Consensus       324 vwslGvil~e~l~~g~~P~~~~-~~~~~~~~~~~~~~~~--~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         324 VWSFGILLWEIFTLGGTPYPEL-PMNEQFYNAIKRGYRM--AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCC-CchHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            9999999999998 55554322 2222222222222111  112235678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PTZ00284 protein kinase; Provisional

Probab=99.97  E-value=7.4e-31  Score=196.03  Aligned_cols=144  Identities=11%  Similarity=0.131  Sum_probs=105.8

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCC----------------CeEECccccccccCCCCCcccccCcccccc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDH----------------VAKLFDFSLAESIPDGETHIKDAIPIGIMG   64 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~----------------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~   64 (163)
                      ||+.||+|||   . .+|+||||||+|||++.++                .+||+|||.+.......     ....+|..
T Consensus       239 qi~~aL~yLH---~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~-----~~~~gt~~  310 (467)
T PTZ00284        239 QTGVALDYFH---TELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSR-----TAIVSTRH  310 (467)
T ss_pred             HHHHHHHHHH---hcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcccc-----ccccCCcc
Confidence            7899999999   6 5999999999999998765                48999999875432221     23468899


Q ss_pred             ccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhh-------------------------h--h
Q 043958           65 FVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------------E--L  117 (163)
Q Consensus        65 ~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------------~--~  117 (163)
                      |+|||.+.+..++.++||||+||++|++++|..||......+. +..+...                         .  .
T Consensus       311 Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~-~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  389 (467)
T PTZ00284        311 YRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEH-LHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRP  389 (467)
T ss_pred             ccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccc
Confidence            9999999998999999999999999999999888754332211 1000000                         0  0


Q ss_pred             ccc-----------chhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          118 CIQ-----------SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       118 ~~~-----------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...           ..........+.+|+.+||..||++|||+.++++
T Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        390 CTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             cCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence            000           0000112356889999999999999999999987

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=9.2e-31  Score=187.31  Aligned_cols=138  Identities=17%  Similarity=0.282  Sum_probs=109.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++.........  .....|++.|+|||.+.+..++.++|
T Consensus       109 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (323)
T cd05616         109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVD  183 (323)
T ss_pred             HHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCc--cccCCCChhhcCHHHhcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998654322211  11345889999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+||+++++++|..|+.. ....++...+.......    +...+.++.+++.+|++.+|++|++.
T Consensus       184 iwSlGvil~elltg~~Pf~~-~~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         184 WWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAY----PKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             hhchhHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCCCC----CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            99999999999999888753 33344444444433222    22356788999999999999999984

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=7.9e-31  Score=181.84  Aligned_cols=150  Identities=20%  Similarity=0.341  Sum_probs=114.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +++++|+||+|+||+++.++.++++|||++......... .......++..|+|||.+.+..++.++
T Consensus       105 qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~  181 (257)
T cd05040         105 QIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHAS  181 (257)
T ss_pred             HHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchh
Confidence            7899999999   899999999999999999999999999999776543221 111123466789999999888899999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      |+||+|++++++++ +..|+. .....+.........  .........+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       182 Di~slG~~l~el~t~g~~p~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         182 DVWMFGVTLWEMFTYGEEPWA-GLSGSQILKKIDKEG--ERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             hhHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHhcC--CcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            99999999999998 555543 333333333322211  111122235678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=5.6e-31  Score=196.40  Aligned_cols=146  Identities=20%  Similarity=0.321  Sum_probs=120.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCC--CCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~   78 (163)
                      ||++||.|||   ...|+|||||-+|+|++ -.|.+||+|||-++....  ....+.++.||.-|||||++..++  |..
T Consensus       683 QILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TETFTGTLQYMAPEvIDqG~RGYG~  757 (1226)
T KOG4279|consen  683 QILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDQGPRGYGK  757 (1226)
T ss_pred             HHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhcc--CCccccccccchhhhChHhhccCCcCCCc
Confidence            8999999999   89999999999999995 679999999999877642  223344667999999999998764  888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|||||||++.||.+|.+||..-...+..+-++---+  ...+.+...+.+.+++|.+|+..+|.+||++.+++.
T Consensus       758 aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK--vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  758 AADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK--VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             hhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee--cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            99999999999999999999987666655544432222  334455678899999999999999999999999875

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=1e-30  Score=187.64  Aligned_cols=145  Identities=19%  Similarity=0.268  Sum_probs=109.1

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   ++ +++||||||+||+++.++.++++|||++........    ....++..|+|||.+.+..++.++
T Consensus       111 ~i~~~l~~lH---~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~g~~~y~aPE~~~~~~~~~~~  183 (331)
T cd06649         111 AVLRGLAYLR---EKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQS  183 (331)
T ss_pred             HHHHHHHHHh---hcCCEEcCCCChhhEEEcCCCcEEEccCccccccccccc----ccCCCCcCcCCHhHhcCCCCCchH
Confidence            7899999999   64 699999999999999999999999999876543221    133588899999999988899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhcc---chh------------------------------------------hhh
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIV---DPV------------------------------------------IRE  115 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~---~~~------------------------------------------~~~  115 (163)
                      |+||+|++++++++|..|+..... .++.   ...                                          ...
T Consensus       184 DiwslG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (331)
T cd06649         184 DIWSMGLSLVELAIGRYPIPPPDA-KELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVN  262 (331)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHh
Confidence            999999999999999888743221 1110   000                                          000


Q ss_pred             hhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958          116 ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       116 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      .. .+.......+.++++|+.+||+.||++|||+.++++.
T Consensus       263 ~~-~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         263 EP-PPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             CC-CcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            00 0000111356789999999999999999999999873

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=1.3e-30  Score=186.54  Aligned_cols=143  Identities=21%  Similarity=0.278  Sum_probs=110.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++.........  .....|+..|+|||.+.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~D  183 (324)
T cd05589         109 CVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDR--TSTFCGTPEFLAPEVLTETSYTRAVD  183 (324)
T ss_pred             HHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCc--ccccccCccccCHhHhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998654322211  12346889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|++++++++|..|+... ...+....+.......    ....+..+.+++.+||+.||++||     ++.++++
T Consensus       184 iwslG~il~el~~G~~pf~~~-~~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         184 WWGLGVLIYEMLVGESPFPGD-DEEEVFDSIVNDEVRY----PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             hhhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCC----CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            999999999999998887533 3333433333332221    123457789999999999999999     4555554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.97  E-value=1.4e-30  Score=181.65  Aligned_cols=150  Identities=19%  Similarity=0.300  Sum_probs=113.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-----CeEECccccccccCCCCCcccccCccccccccCccccccCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~   76 (163)
                      |++.||+|||   +.+++|+|++|+||+++.++     .++++|||++................++..|+|||.+.++.+
T Consensus       114 ~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  190 (269)
T cd05044         114 DVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF  190 (269)
T ss_pred             HHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCc
Confidence            7889999999   89999999999999998887     899999999876543322221112245678999999998889


Q ss_pred             CcccceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +.++|+||||++++++++ +..|+... ...+.........   ........+..+.+++.+||..+|++||++.++++.
T Consensus       191 ~~~~Dv~slG~il~ellt~g~~p~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  266 (269)
T cd05044         191 TTQSDVWSFGVLMWEILTLGQQPYPAL-NNQEVLQHVTAGG---RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEI  266 (269)
T ss_pred             ccchhHHHHHHHHHHHHHcCCCCCccc-CHHHHHHHHhcCC---ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            999999999999999997 66555432 2222222221111   112223456789999999999999999999999998


Q ss_pred             HHH
Q 043958          156 LRQ  158 (163)
Q Consensus       156 L~~  158 (163)
                      |++
T Consensus       267 l~~  269 (269)
T cd05044         267 LQN  269 (269)
T ss_pred             HhC
Confidence            863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=7.3e-31  Score=182.18  Aligned_cols=148  Identities=18%  Similarity=0.265  Sum_probs=111.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||.||+++.++.++++|||.++.......... ....++..|++||...+..++.++|
T Consensus       108 ~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~-~~~~~~~~y~~pe~~~~~~~~~~~D  183 (256)
T cd05113         108 DVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLLYSKFSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeec-CCCccChhhCCHHHHhcCcccchhH
Confidence            7899999999   89999999999999999999999999999876544322111 1223556799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      +||||+++|++++ +..|+ ......+.......... .  ......+..+.+++.+||+.+|++|||+.++++.|+
T Consensus       184 i~slG~~l~~l~~~g~~p~-~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         184 VWAFGVLMWEVYSLGKMPY-ERFNNSETVEKVSQGLR-L--YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCc-CcCCHHHHHHHHhcCCC-C--CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            9999999999998 55554 33333333333332221 1  111234678999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.97  E-value=2.4e-30  Score=180.21  Aligned_cols=152  Identities=17%  Similarity=0.273  Sum_probs=118.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       114 ~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~y~apE~~~~~~~~~~~D  188 (267)
T cd08224         114 QLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSD  188 (267)
T ss_pred             HHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCccc--ceecCCccccCHHHhccCCCCchhc
Confidence            6889999999   8999999999999999999999999999987654332211  1235777899999998888999999


Q ss_pred             eeecchhhHHHhhhcccccccc-chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECN-TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..|+.... ...+..+.......  ........+..+.+++.+||..+|++|||+.++++.|+++.
T Consensus       189 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         189 IWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDY--PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCC--CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            9999999999999988875433 22223222222211  11112245678999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.97  E-value=1.5e-30  Score=185.58  Aligned_cols=96  Identities=18%  Similarity=0.211  Sum_probs=79.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee----CCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccC-C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTG-D   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~----~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~-~   75 (163)
                      |++.||+|||   +.+++||||||+|||+    +.++.+|++|||+++........ .......++..|+|||.+.+. .
T Consensus       116 qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  192 (317)
T cd07868         116 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  192 (317)
T ss_pred             HHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCC
Confidence            7899999999   8999999999999999    45678999999999776543221 122234678899999998764 5


Q ss_pred             CCcccceeecchhhHHHhhhccccc
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHI  100 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~  100 (163)
                      ++.++|+||+||++++++++..||.
T Consensus       193 ~~~~~DiwslG~il~el~~g~~~f~  217 (317)
T cd07868         193 YTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             cCchhhHHHHHHHHHHHHhCCCCcc
Confidence            8889999999999999999988765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=1e-30  Score=187.54  Aligned_cols=139  Identities=17%  Similarity=0.262  Sum_probs=105.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||+++........  .....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (329)
T cd05618         104 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVD  178 (329)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc--cccccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998653222211  12346889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccch--------hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTF--------DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|++++++++|..|+......        ..+.........    ..+...+..+.+++.+||+.||++||++
T Consensus       179 iwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~----~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         179 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI----RIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             eecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC----CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            999999999999998887421110        111111122211    1122345778999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.2e-30  Score=180.28  Aligned_cols=150  Identities=16%  Similarity=0.277  Sum_probs=111.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++.................+..|+|||.+.++.++.++|
T Consensus       101 ~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~D  177 (251)
T cd05041         101 DAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESD  177 (251)
T ss_pred             HHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchh
Confidence            6789999999   8999999999999999999999999999987654322221111122345699999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      +||+|+++++++++..+++............... .  ........+..+.+++.+||..+|++|||+.++++.|+
T Consensus       178 i~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         178 VWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-Y--RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-C--CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            9999999999998444444333322222222111 1  11222345678999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.97  E-value=7.8e-31  Score=180.85  Aligned_cols=149  Identities=17%  Similarity=0.154  Sum_probs=114.3

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      +|+++|++|||   ...|+|||+|++|+|++..|.+|++|||+|+.+.+......  ..+-|.+|.|||.+.+. .|+..
T Consensus       184 ~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T--~lVVTLWYRaPELLLG~~tyst~  258 (419)
T KOG0663|consen  184 LQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYT--PLVVTLWYRAPELLLGAKTYSTA  258 (419)
T ss_pred             HHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhhcCCcccCc--ceEEEeeecCHHHhcCCcccCcc
Confidence            48999999999   89999999999999999999999999999998876633322  44688999999999875 49999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhh------------------hhccc-chhh--------HHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE------------------ELCIQ-SSEK--------DKQVQAFV  132 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~-~~~~--------~~~~~~~~  132 (163)
                      .|+||+||++.|++.+.+.+......+++-......                  ...+. .++.        ...+....
T Consensus       259 iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~  338 (419)
T KOG0663|consen  259 VDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGF  338 (419)
T ss_pred             hhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHH
Confidence            999999999999999887776655444322111000                  00000 0000        01346788


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+..++.+||.+|.|+++.++
T Consensus       339 ~Lln~llt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  339 DLLNKLLTYDPGKRITAEDGLK  360 (419)
T ss_pred             HHHHHHhccCccccccHHHhhc
Confidence            9999999999999999999875

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=6.8e-31  Score=188.15  Aligned_cols=140  Identities=20%  Similarity=0.277  Sum_probs=110.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.++|+|||+++........  .....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (325)
T cd05604         104 EIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDT--TTTFCGTPEYLAPEVIRKQPYDNTVD  178 (325)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCC--cccccCChhhCCHHHHcCCCCCCcCc
Confidence            7899999999   899999999999999999999999999998653322211  12345889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      +||+|++++++++|..|+... ...++.+..........    ...+..+.+++.+|++.+|.+||++.+
T Consensus       179 vwslG~il~el~~G~~pf~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         179 WWCLGAVLYEMLYGLPPFYCR-DVAEMYDNILHKPLVLR----PGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             cccccceehhhhcCCCCCCCC-CHHHHHHHHHcCCccCC----CCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            999999999999998887643 33344444433322111    134567889999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.2e-31  Score=188.34  Aligned_cols=144  Identities=15%  Similarity=0.199  Sum_probs=109.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+||+++.++.++|+|||++.........  .....|+..|+|||.+.+. .++.++
T Consensus       104 qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~  178 (330)
T cd05586         104 ELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKT--TNTFCGTTEYLAPEVLLDEKGYTKHV  178 (330)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCC--ccCccCCccccCHHHHcCCCCCCCcc
Confidence            7899999999   899999999999999999999999999998654322221  1234588999999988754 478899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC----CHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP----TMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp----t~~~i~~  154 (163)
                      |+||+|++++++++|..|+... ...+....+.........   ...+..+.+++.+||+.+|.+||    ++.++++
T Consensus       179 DvwslGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         179 DFWSLGVLVFEMCCGWSPFYAE-DTQQMYRNIAFGKVRFPK---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             ceeccccEEEEeccCCCCCCCC-CHHHHHHHHHcCCCCCCC---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            9999999999999998887543 333333333333222211   12457889999999999999998    4555554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=1.2e-30  Score=186.82  Aligned_cols=138  Identities=18%  Similarity=0.295  Sum_probs=108.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++.........  .....|+..|+|||.+.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (324)
T cd05587         109 EIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKT--TRTFCGTPDYIAPEIIAYQPYGKSVD  183 (324)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCc--eeeecCCccccChhhhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998643222211  11345889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|++++++++|..|+.. ....+....+.......    ....+..+.+++.+||..+|++|++.
T Consensus       184 iwslGvil~elltG~~pf~~-~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         184 WWAFGVLLYEMLAGQPPFDG-EDEDELFQSIMEHNVSY----PKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             hhhhHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            99999999999999887653 33333443333332211    22345788999999999999999976

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=1.1e-30  Score=186.63  Aligned_cols=143  Identities=19%  Similarity=0.273  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       104 qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~D  178 (318)
T cd05570         104 EIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTT--STFCGTPDYIAPEILSYQPYGPAVD  178 (318)
T ss_pred             HHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcc--cceecCccccCHHHhcCCCCCcchh
Confidence            7899999999   8999999999999999999999999999986532222111  1335888999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH-----HHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM-----IDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~~i~~  154 (163)
                      +||+|++++++++|..||... ........+.......    ....+..+.+++.+||+.||++||++     .++++
T Consensus       179 iwslGvil~~l~~G~~pf~~~-~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         179 WWALGVLLYEMLAGQSPFEGD-DEDELFQSILEDEVRY----PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             hhhHHHHHHHHhhCCCCCCCC-CHHHHHHHHHcCCCCC----CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            999999999999998887533 3333333333222211    12345789999999999999999998     77664

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.96  E-value=1.5e-30  Score=189.27  Aligned_cols=149  Identities=14%  Similarity=0.216  Sum_probs=112.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC----CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----YN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~----~~   77 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||++.......... .....||+.|+|||.+.+..    ++
T Consensus       150 qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~~~~~~  225 (370)
T cd05621         150 EVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR-CDTAVGTPDYISPEVLKSQGGDGYYG  225 (370)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecccCCcee-cccCCCCcccCCHHHHhccCCCCCCC
Confidence            7899999999   8999999999999999999999999999997664332211 12446899999999987543    77


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCC--CCCHHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAED--RPTMIDVAKQ  155 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~--Rpt~~~i~~~  155 (163)
                      .++|+||+|++++++++|..||.... .......+.........+.....+..+++++..|+..++.+  |+++.++++.
T Consensus       226 ~~~DiwSlG~ilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         226 RECDWWSVGVFLFEMLVGDTPFYADS-LVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             cccCEEeehHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            89999999999999999988876443 23333333332222223333345678999999999866544  8899998763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.96  E-value=2.8e-30  Score=180.33  Aligned_cols=152  Identities=16%  Similarity=0.213  Sum_probs=107.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-------C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-------G   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-------~   74 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+..       .
T Consensus       107 ~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (268)
T cd05086         107 EIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITA  183 (268)
T ss_pred             HHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccC
Confidence            7899999999   89999999999999999999999999998754322211111113346778999998753       2


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhh-c-ccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL-C-IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                      .++.++|+||+|+++++++++..+++......+.......... . .........+..+.+++..|| .+|++||++.++
T Consensus       184 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i  262 (268)
T cd05086         184 EQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEV  262 (268)
T ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHH
Confidence            3567899999999999999765555543333333333222211 1 111111235577889999999 679999999999


Q ss_pred             HHHHH
Q 043958          153 AKQLR  157 (163)
Q Consensus       153 ~~~L~  157 (163)
                      ++.|.
T Consensus       263 ~~~l~  267 (268)
T cd05086         263 HRLLT  267 (268)
T ss_pred             HHHhc
Confidence            88773

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.96  E-value=1.7e-30  Score=180.58  Aligned_cols=149  Identities=23%  Similarity=0.315  Sum_probs=113.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........... ....++..|+|||.+.+..++.++|
T Consensus       110 ~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~~pe~~~~~~~~~~~D  185 (260)
T cd05067         110 QIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSD  185 (260)
T ss_pred             HHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc-cCCcccccccCHHHhccCCcCcccc
Confidence            7899999999   89999999999999999999999999999876553222111 1223556899999998888899999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+. .....+........ .  ..+.....+.++.+++.+||+.+|++|||++++...|++
T Consensus       186 i~slG~~l~el~~~g~~p~~-~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         186 VWSFGILLTEIVTYGRIPYP-GMTNPEVIQNLERG-Y--RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             hHHHHHHHHHHHhCCCCCCC-CCChHHHHHHHHcC-C--CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            9999999999998 655554 33333333322221 1  112223355789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.96  E-value=1.4e-30  Score=187.50  Aligned_cols=140  Identities=17%  Similarity=0.193  Sum_probs=111.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+|||++.++.++++|||++.......     ....|++.|+|||.+.+..++.++|
T Consensus       139 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  210 (340)
T PTZ00426        139 QIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRT-----YTLCGTPEYIAPEILLNVGHGKAAD  210 (340)
T ss_pred             HHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCc-----ceecCChhhcCHHHHhCCCCCcccc
Confidence            7899999999   8999999999999999999999999999997654322     1346888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+||+++++++|..|+..... ......+.......    +...+..+.+++++|++.+|++|+     ++.++++
T Consensus       211 iwSlGvil~ell~G~~Pf~~~~~-~~~~~~i~~~~~~~----p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        211 WWTLGIFIYEILVGCPPFYANEP-LLIYQKILEGIIYF----PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             ccchhhHHHHHhcCCCCCCCCCH-HHHHHHHhcCCCCC----CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            99999999999999888764432 22333333332211    123456789999999999999995     7887765

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=1.6e-30  Score=185.65  Aligned_cols=143  Identities=23%  Similarity=0.332  Sum_probs=110.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++.........  .....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (316)
T cd05619         104 EIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAK--TCTFCGTPDYIAPEILLGQKYNTSVD  178 (316)
T ss_pred             HHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCc--eeeecCCccccCHHHHcCCCCCchhh
Confidence            7899999999   899999999999999999999999999998653222211  12345888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH-HHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI-DVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-~i~~  154 (163)
                      +||+||++|++++|..|+... ...++...+.......    ....+..+.+++.+||+.+|++||++. ++.+
T Consensus       179 vwslG~il~el~~G~~pf~~~-~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~  247 (316)
T cd05619         179 WWSFGVLLYEMLIGQSPFHGH-DEEELFQSIRMDNPCY----PRWLTREAKDILVKLFVREPERRLGVKGDIRQ  247 (316)
T ss_pred             hhhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCC----CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence            999999999999998876533 3333333333222111    123456789999999999999999986 5543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.96  E-value=3.1e-30  Score=180.15  Aligned_cols=152  Identities=20%  Similarity=0.266  Sum_probs=116.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++............ ...++..|+|||.+....++.++|
T Consensus       115 ~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~D  190 (270)
T cd05056         115 QLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKAS-KGKLPIKWMAPESINFRRFTSASD  190 (270)
T ss_pred             HHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeecccccceecC-CCCccccccChhhhccCCCCchhh
Confidence            7899999999   899999999999999999999999999998765443222111 223445799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+..........   ......++..+.+++.+|+..+|++|||+.++++.|+++.
T Consensus       191 i~slG~il~el~~~g~~pf~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         191 VWMFGVCMWEILMLGVKPFQ-GVKNNDVIGRIENGER---LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             hHHHHHHHHHHHHcCCCCCC-CCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999886 655553 3332333322222211   1122345678999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       267 ~  267 (270)
T cd05056         267 Q  267 (270)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=1.1e-30  Score=196.35  Aligned_cols=149  Identities=18%  Similarity=0.146  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++|+||||||+|||++.++.+||+|||++........... ....|+..|+|||.+.+..++.++|
T Consensus       275 ql~~aL~yLH---~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~D  350 (501)
T PHA03210        275 QLLCAVEYIH---DKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFD-YGWVGTVATNSPEILAGDGYCEITD  350 (501)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEeCCCceecCccccccc-ccccCCcCCCCchhhcCCCCCcHHH
Confidence            7899999999   89999999999999999999999999999977654332221 1346899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccc---hhhccchhh-----hhhhcc----------------------cchhhHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVI-----REELCI----------------------QSSEKDKQVQAF  131 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~----------------------~~~~~~~~~~~~  131 (163)
                      |||+||++++++++..+++....   ...+.....     ...+..                      ........+..+
T Consensus       351 iwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  430 (501)
T PHA03210        351 IWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADF  430 (501)
T ss_pred             HHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHH
Confidence            99999999999998765543221   111111000     000000                      000001123467


Q ss_pred             HHHHHhccccCcCCCCCHHHHHH
Q 043958          132 VELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+++.+||+.||.+|||+.++++
T Consensus       431 ~~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        431 EYPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHHhccCcccCcCHHHHhh
Confidence            78899999999999999999986

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.96  E-value=2.4e-30  Score=180.68  Aligned_cols=152  Identities=19%  Similarity=0.201  Sum_probs=107.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-------   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-------   74 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.+.       
T Consensus       108 qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  184 (269)
T cd05087         108 EIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVV  184 (269)
T ss_pred             HHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhcccccccccc
Confidence            7899999999   899999999999999999999999999998655433322222233466789999988642       


Q ss_pred             CCCcccceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccch-hhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           75 DYNEKCDVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSS-EKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                      .++.++|+||+|++++++++ +..|+......+...............+ .....+..+.+++..|| .+|++|||++++
T Consensus       185 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l  263 (269)
T cd05087         185 DQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEV  263 (269)
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHH
Confidence            35779999999999999996 6666543332222111111111111111 11124567889999999 689999999999


Q ss_pred             HHHHH
Q 043958          153 AKQLR  157 (163)
Q Consensus       153 ~~~L~  157 (163)
                      ++.|+
T Consensus       264 ~~~l~  268 (269)
T cd05087         264 HLLLS  268 (269)
T ss_pred             HHHhc
Confidence            98874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.96  E-value=9e-31  Score=182.55  Aligned_cols=150  Identities=22%  Similarity=0.286  Sum_probs=110.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||.|||   +.+++|+|++|.||+++.++.++++|||++..........  ....++..|+|||.+.   ...++.
T Consensus       114 qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~  188 (267)
T cd06646         114 ETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKR--KSFIGTPYWMAPEVAAVEKNGGYNQ  188 (267)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccccccc--CccccCccccCHhHcccccCCCCcc
Confidence            7899999999   8999999999999999999999999999997664322111  1235778899999874   344778


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      ++|+||+|+++++++++..|+............................+..+.+++.+||..+|++|||++++++.|
T Consensus       189 ~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         189 LCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            999999999999999998887544333222211111100011111223467899999999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.96  E-value=1.1e-30  Score=183.52  Aligned_cols=144  Identities=20%  Similarity=0.307  Sum_probs=111.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       105 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~D  179 (280)
T cd05608         105 QIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKT--KGYAGTPGFMAPELLQGEEYDFSVD  179 (280)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccc--cccCCCcCccCHHHhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999987665433221  1335888999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccch---hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTF---DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~  153 (163)
                      +||+|+++++++++..|+......   ..........    ........+..+.+++.+||+.+|++||     ++++++
T Consensus       180 vwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l  255 (280)
T cd05608         180 YFALGVTLYEMIAARGPFRARGEKVENKELKQRILND----SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLR  255 (280)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhccc----CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHh
Confidence            999999999999998887543221   1111111111    1122234567899999999999999999     667776


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      +
T Consensus       256 ~  256 (280)
T cd05608         256 T  256 (280)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=1.7e-30  Score=180.17  Aligned_cols=147  Identities=20%  Similarity=0.282  Sum_probs=113.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   ..+++|+||||+||+++.++.++++|||.++.......     ....+..|++||.+..+.++.++|
T Consensus       110 qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-----~~~~~~~~~ape~~~~~~~~~~~D  181 (256)
T cd05039         110 DVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-----SGKLPVKWTAPEALREKKFSTKSD  181 (256)
T ss_pred             HHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccccc-----cCCCcccccCchhhcCCcCCcHHH
Confidence            7899999999   89999999999999999999999999999876643222     123455799999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||+|++++++++...+++......++........   ........++.+.+++.+||..+|++|||+.++++.|+++
T Consensus       182 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         182 VWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY---RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC---CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            99999999999973344444444444333222211   1111223567899999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=2.2e-30  Score=188.44  Aligned_cols=149  Identities=13%  Similarity=0.216  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC----CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----YN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~----~~   77 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++........... ....||+.|+|||.+.+..    ++
T Consensus       150 qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~l~~~~~~~~~~  225 (371)
T cd05622         150 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC-DTAVGTPDYISPEVLKSQGGDGYYG  225 (371)
T ss_pred             HHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccc-cCcccCccccCHHHHhccCCCccCC
Confidence            7899999999   89999999999999999999999999999976654322221 2446899999999987532    78


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCC--CCCHHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAED--RPTMIDVAKQ  155 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~--Rpt~~~i~~~  155 (163)
                      .++|+||+|+++|++++|..||.... .......+.........+.....+..+++++..|+..++.+  |++++++++.
T Consensus       226 ~~~DiwSlGvilyell~G~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         226 RECDWWSVGVFLYEMLVGDTPFYADS-LVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             CccceeehhHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            89999999999999999988876433 33333333332222222333356778999999999844433  7788888763

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.9e-30  Score=187.07  Aligned_cols=147  Identities=17%  Similarity=0.154  Sum_probs=106.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++++||||||+||+++.++.++|+|||+++........   ....|+..|+|||.+.+..++.++|
T Consensus       165 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~D  238 (357)
T PHA03209        165 QILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF---LGLAGTVETNAPEVLARDKYNSKAD  238 (357)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCccc---ccccccccccCCeecCCCCCCchhh
Confidence            7899999999   899999999999999999999999999998654322211   1235888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchh----------hccchhhhhhh---ccc--------------------------ch
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFD----------EIVDPVIREEL---CIQ--------------------------SS  122 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~----------~~~~~~~~~~~---~~~--------------------------~~  122 (163)
                      +||+|+++|+++++..+++......          .+.........   ...                          ..
T Consensus       239 iwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (357)
T PHA03209        239 IWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCF  318 (357)
T ss_pred             HHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHH
Confidence            9999999999998776664332111          00000000000   000                          00


Q ss_pred             hhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          123 EKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       123 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .....+..+.++|.+||+.||.+|||+.++++
T Consensus       319 ~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~  350 (357)
T PHA03209        319 QRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN  350 (357)
T ss_pred             hccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence            00123445677999999999999999999986

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.96  E-value=3.8e-30  Score=179.62  Aligned_cols=151  Identities=16%  Similarity=0.264  Sum_probs=113.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCcc---ccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI---GIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~---~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++................   .+..|++||.+.+..++.
T Consensus       114 ~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~  190 (269)
T cd05065         114 GIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTS  190 (269)
T ss_pred             HHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccc
Confidence            7889999999   8999999999999999999999999999987654432221111111   234699999998888999


Q ss_pred             ccceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      ++|+||+|++++++++ +..|+. .....+....+... .  ..+....++..+.+++.+||..+|++||++.+++..|+
T Consensus       191 ~~DvwslG~~l~e~l~~g~~p~~-~~~~~~~~~~i~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  266 (269)
T cd05065         191 ASDVWSYGIVMWEVMSYGERPYW-DMSNQDVINAIEQD-Y--RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD  266 (269)
T ss_pred             hhhhhhhHHHHHHHhcCCCCCCC-CCCHHHHHHHHHcC-C--cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            9999999999999886 555554 33333333332211 1  11222345678999999999999999999999999998


Q ss_pred             HH
Q 043958          158 QA  159 (163)
Q Consensus       158 ~~  159 (163)
                      ++
T Consensus       267 ~~  268 (269)
T cd05065         267 KM  268 (269)
T ss_pred             hh
Confidence            75

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-30  Score=192.45  Aligned_cols=146  Identities=22%  Similarity=0.344  Sum_probs=115.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |+++||.|||   +.+|||||+|+.|||++.+|.++++|||++....  .......++.||++|||||...     ..+|
T Consensus       138 q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~PY  212 (1187)
T KOG0579|consen  138 QVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQPY  212 (1187)
T ss_pred             HHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccch--hHHhhhccccCCcccccchheeeccccCCCc
Confidence            6789999999   9999999999999999999999999999974433  2233334678999999999774     5689


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++||||||+++.+|....+|-..-++...++. +....++ -...+...+..|.++++.||.++|..||++.++++
T Consensus       213 DykaDiWSlGITLIEMAqiEPPHhelnpMRVllK-iaKSePP-TLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  213 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK-IAKSEPP-TLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             hhhhhHHhhhhHHHHHhccCCCccccchHHHHHH-HhhcCCC-cccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            9999999999999999887666544444444443 3333322 22233457789999999999999999999999886

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=2.6e-30  Score=180.29  Aligned_cols=151  Identities=17%  Similarity=0.248  Sum_probs=114.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccc-cCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-AIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+|+||+||+++.++.++++|||++............ .....+..|++||.+.+..++.++
T Consensus       115 ~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  191 (268)
T cd05063         115 GIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSAS  191 (268)
T ss_pred             HHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHh
Confidence            6889999999   899999999999999999999999999998765433222111 111234569999999888889999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||+|+++|++++ +..|+... ...+....+....   ..+.....+.++.+++.+||..+|++||++.++++.|+++
T Consensus       192 Dv~slG~il~ell~~g~~p~~~~-~~~~~~~~i~~~~---~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         192 DVWSFGIVMWEVMSFGERPYWDM-SNHEVMKAINDGF---RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcC-CHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999987 66665432 2233333322221   1122234567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=5.1e-30  Score=180.34  Aligned_cols=153  Identities=18%  Similarity=0.239  Sum_probs=113.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +++++||||||+||+++.++.++++|||++.......... ......++..|+|||.+.+..++.++
T Consensus       117 ~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~  193 (284)
T cd05079         117 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIAS  193 (284)
T ss_pred             HHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccc
Confidence            7899999999   8999999999999999999999999999987664433211 11233466679999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccc-h-------------hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNT-F-------------DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      |+||+|+++++++++..+...... .             ..........   ...+....++..+.+++.+||+.+|++|
T Consensus       194 Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~R  270 (284)
T cd05079         194 DVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG---KRLPRPPNCPEEVYQLMRKCWEFQPSKR  270 (284)
T ss_pred             cchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC---ccCCCCCCCCHHHHHHHHHHccCCcccC
Confidence            999999999999986554321100 0             0000000001   0111123356789999999999999999


Q ss_pred             CCHHHHHHHHHHHh
Q 043958          147 PTMIDVAKQLRQAY  160 (163)
Q Consensus       147 pt~~~i~~~L~~~~  160 (163)
                      ||+.++++.|+.+.
T Consensus       271 pt~~~il~~l~~~~  284 (284)
T cd05079         271 TTFQNLIEGFEAIL  284 (284)
T ss_pred             cCHHHHHHHHHhhC
Confidence            99999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=5.2e-30  Score=178.54  Aligned_cols=141  Identities=17%  Similarity=0.288  Sum_probs=104.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC-------eEECccccccccCCCCCcccccCccccccccCccccc-c
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-------AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-T   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~-------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-~   73 (163)
                      ||+.||+|||   +++++||||||+||+++.++.       ++++|||++.......      ...++..|+|||.+. +
T Consensus       113 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~~  183 (262)
T cd05077         113 QLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQ------ECVERIPWIAPECVEDS  183 (262)
T ss_pred             HHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcc------cccccccccChhhhcCC
Confidence            7899999999   899999999999999987664       8999999886543221      234677899999887 4


Q ss_pred             CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      ..++.++||||+|+++|+++....+++......+... ........    ......++.+++.+||+.||++||++.+++
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~li~~cl~~dp~~Rp~~~~il  258 (262)
T cd05077         184 KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-FYEGQCML----VTPSCKELADLMTHCMNYDPNQRPFFRAIM  258 (262)
T ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-HHhcCccC----CCCChHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            5688899999999999999854444443333222111 11111111    112245789999999999999999999998


Q ss_pred             HHH
Q 043958          154 KQL  156 (163)
Q Consensus       154 ~~L  156 (163)
                      +.+
T Consensus       259 ~~~  261 (262)
T cd05077         259 RDI  261 (262)
T ss_pred             Hhc
Confidence            875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.96  E-value=2.8e-30  Score=178.95  Aligned_cols=146  Identities=20%  Similarity=0.294  Sum_probs=112.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++........     ....+..|+|||.+.++.++.++|
T Consensus       108 qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~-----~~~~~~~y~~pe~~~~~~~~~~~D  179 (254)
T cd05083         108 DVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD-----NSKLPVKWTAPEALKHKKFSSKSD  179 (254)
T ss_pred             HHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceeccccCC-----CCCCCceecCHHHhccCCcCchhh
Confidence            7899999999   89999999999999999999999999999865433211     122345799999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|+++++++++..+++......+........ .  ........+..+.+++.+||+.+|+.||++.+++..|++
T Consensus       180 v~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         180 VWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-Y--RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-C--CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            9999999999998444444444443333332222 1  111223456789999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.96  E-value=1.8e-30  Score=201.94  Aligned_cols=147  Identities=22%  Similarity=0.291  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccC----------------CCCCcccccCccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP----------------DGETHIKDAIPIGIMGF   65 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~----------------~~~~~~~~~~~~~~~~~   65 (163)
                      ||+.||+|+|   ++++|||||||.||++++++.+||+|||++....                .+..........||..|
T Consensus       705 eIlEGLaYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalY  781 (1351)
T KOG1035|consen  705 EILEGLAYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALY  781 (1351)
T ss_pred             HHHHHHHHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeee
Confidence            7899999999   8999999999999999999999999999997621                01111122356799999


Q ss_pred             cCccccccC---CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccC
Q 043958           66 VATEYVTTG---DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSES  142 (163)
Q Consensus        66 ~~PE~~~~~---~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  142 (163)
                      +|||.+.+.   +|+.|+|+||+|++++||+   +||........++.....+..+.......+..+.-..+|.++++.|
T Consensus       782 vAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hd  858 (1351)
T KOG1035|consen  782 VAPELLSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHD  858 (1351)
T ss_pred             ecHHHhcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCC
Confidence            999999764   4999999999999999998   4554444433344433333322222223445566778999999999


Q ss_pred             cCCCCCHHHHHH
Q 043958          143 AEDRPTMIDVAK  154 (163)
Q Consensus       143 p~~Rpt~~~i~~  154 (163)
                      |.+|||+.+++.
T Consensus       859 P~kRPtA~eLL~  870 (1351)
T KOG1035|consen  859 PSKRPTATELLN  870 (1351)
T ss_pred             CccCCCHHHHhh
Confidence            999999999885

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=4.3e-30  Score=178.59  Aligned_cols=149  Identities=21%  Similarity=0.315  Sum_probs=113.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   ..+++|+||+|+||+++.++.++++|||.+........... ....++..|+|||.+.+..++.++|
T Consensus       110 ~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~D  185 (260)
T cd05073         110 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSD  185 (260)
T ss_pred             HHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccc-cCCcccccccCHhHhccCCcCcccc
Confidence            7899999999   89999999999999999999999999999876543322211 1223456799999998888899999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+. ......+........   ..+.....+.++.+++.+||+.+|++||++.++.+.|++
T Consensus       186 i~slG~~l~~l~t~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         186 VWSFGILLMEIVTYGRIPYP-GMSNPEVIRALERGY---RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             chHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHhCCC---CCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9999999999998 555443 333333332222221   111223456789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.96  E-value=2.4e-30  Score=185.03  Aligned_cols=139  Identities=20%  Similarity=0.293  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+++||||||+||+++.++.+||+|||++.........  .....++..|+|||.+.+..++.++|
T Consensus       104 qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (321)
T cd05603         104 EVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEET--TSTFCGTPEYLAPEVLRKEPYDRTVD  178 (321)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCc--cccccCCcccCCHHHhcCCCCCCcCc
Confidence            7899999999   899999999999999999999999999998653222211  12345888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      +||+||+++++++|..|+... ....+...+......    .....+..+.+++.+||+.+|.+|+++.
T Consensus       179 iwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~~~~----~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         179 WWCLGAVLYEMLYGLPPFYSR-DVSQMYDNILHKPLQ----LPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             ccccchhhhhhhcCCCCCCCC-CHHHHHHHHhcCCCC----CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            999999999999998887643 333333433333211    1223456799999999999999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.3e-30  Score=203.90  Aligned_cols=148  Identities=20%  Similarity=0.220  Sum_probs=122.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCccccccCC---C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTGD---Y   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~---~   76 (163)
                      |++.|++|||   ..+|+||||||.||+++.+|.+|++|||.|..+..+-...  .-....||+.|||||.+.+.+   -
T Consensus      1342 qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~ 1418 (1509)
T KOG4645|consen 1342 QLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGH 1418 (1509)
T ss_pred             HHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCC
Confidence            7899999999   9999999999999999999999999999998876552111  113457999999999997643   4


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      ..+.||||+||++.||++|..|+...++...++..+--+.. ++  .+...+++.++++..|+..||++|.++.++++.
T Consensus      1419 ~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~-Pq--~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1419 GGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHK-PQ--IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             CcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCC-CC--CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            56899999999999999999999887777777777665542 22  233488999999999999999999999888763

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.96  E-value=3.1e-30  Score=178.18  Aligned_cols=148  Identities=20%  Similarity=0.285  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|+|   +.+++|+||+|+||+++.++.++++|||++............ ...++..|+|||.+.++.++.++|
T Consensus       101 ~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~D  176 (250)
T cd05085         101 DAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG-LKQIPIKWTAPEALNYGRYSSESD  176 (250)
T ss_pred             HHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCC-CCCCcccccCHHHhccCCCCchhH
Confidence            6889999999   899999999999999999999999999998654433221111 223456799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      +||+|++++++++ +..|+.. ............ ..  ........+..+.+++.+||+.+|++||++.++.+.|.
T Consensus       177 i~slG~ll~~~~~~g~~p~~~-~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         177 VWSYGILLWETFSLGVCPYPG-MTNQQAREQVEK-GY--RMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHHHhcCCCCCCCC-CCHHHHHHHHHc-CC--CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            9999999999998 5555533 222222222211 11  11222345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=4.2e-30  Score=185.21  Aligned_cols=144  Identities=17%  Similarity=0.228  Sum_probs=107.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||.|||   +.+++||||||+||+++.++.+|++|||++.......     ....++..|+|||.+.+ ..++.++
T Consensus       126 qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07878         126 QLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEM-----TGYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCccceecCCCc-----CCccccccccCchHhcCCccCCchh
Confidence            7899999999   8999999999999999999999999999987654322     13357889999999876 4688899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh------------------hhc---ccch------hhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE------------------ELC---IQSS------EKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~---~~~~------~~~~~~~~~~~  133 (163)
                      |+||+|+++++++++..|+......+. +......                  .+.   ...+      ......+.+.+
T Consensus       198 DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (343)
T cd07878         198 DIWSVGCIMAELLKGKALFPGNDYIDQ-LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAID  276 (343)
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHH
Confidence            999999999999999887754332211 1110000                  000   0000      00112345789


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+|+..||++|||+.++++
T Consensus       277 li~~mL~~dp~~R~s~~ell~  297 (343)
T cd07878         277 LLEKMLVLDSDKRISASEALA  297 (343)
T ss_pred             HHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999999986

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.6e-30  Score=179.75  Aligned_cols=148  Identities=20%  Similarity=0.245  Sum_probs=112.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++........... .....++..|+|||.+.+..++.++
T Consensus       112 ~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  188 (263)
T cd06625         112 QILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKA  188 (263)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchh
Confidence            6889999999   89999999999999999999999999999876543221111 0123467789999999988899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      |+||+|+++|+++++..|+........... ......  ........+..+.+++.+||..+|.+|||+.++++.
T Consensus       189 Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         189 DVWSVGCTVVEMLTEKPPWAEFEAMAAIFK-IATQPT--NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             hhHHHHHHHHHHHhCCCCccccchHHHHHH-HhccCC--CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            999999999999999888754433322221 111111  112223456789999999999999999999998863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.96  E-value=3.8e-30  Score=184.58  Aligned_cols=144  Identities=17%  Similarity=0.249  Sum_probs=107.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++|+|||++........  ......|+..|+|||.+.+..++.++|
T Consensus       104 qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~D  178 (329)
T cd05588         104 EISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TTSTFCGTPNYIAPEILRGEDYGFSVD  178 (329)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC--ccccccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   89999999999999999999999999999864322111  112346888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccch--------hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTF--------DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----  148 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----  148 (163)
                      +||+|++++++++|..|+......        ..+..........    .+...+..+.+++.+||+.||.+|++     
T Consensus       179 iwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~  254 (329)
T cd05588         179 WWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR----IPRSLSVKASSVLKGFLNKDPKERLGCHPQT  254 (329)
T ss_pred             eechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC----CCCCCCHHHHHHHHHHhccCHHHcCCCCCCC
Confidence            999999999999998887421110        1111112222111    11234567999999999999999997     


Q ss_pred             -HHHHHH
Q 043958          149 -MIDVAK  154 (163)
Q Consensus       149 -~~~i~~  154 (163)
                       +.++++
T Consensus       255 ~~~~i~~  261 (329)
T cd05588         255 GFRDIKS  261 (329)
T ss_pred             CHHHHhc
Confidence             556653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.96  E-value=2.8e-30  Score=188.04  Aligned_cols=148  Identities=20%  Similarity=0.234  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++........... ....++..|+|||.+.+. .++.++
T Consensus       111 qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~  186 (372)
T cd07853         111 QILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHM-TQEVVTQYYRAPEILMGSRHYTSAV  186 (372)
T ss_pred             HHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccC-CCCCcCCCcCCHHHHcCCCCCCcHH
Confidence            7899999999   89999999999999999999999999999976543322221 123577889999998764 478899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh-----------------------hhhcccc-----hhhHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-----------------------EELCIQS-----SEKDKQVQAFV  132 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~-----~~~~~~~~~~~  132 (163)
                      |+||+||+++++++|..||......+ .+..+..                       .....+.     ......++.+.
T Consensus       187 DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (372)
T cd07853         187 DIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAV  265 (372)
T ss_pred             HHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHH
Confidence            99999999999999988775433221 1111100                       0000000     00112356789


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+||+.||++|||+.+++.
T Consensus       266 ~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         266 HLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHHHhCCCChhhCcCHHHHhc
Confidence            9999999999999999999986

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=5e-30  Score=180.19  Aligned_cols=146  Identities=23%  Similarity=0.309  Sum_probs=109.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++.........  .....++..|++||.+.     +..+
T Consensus       111 qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  185 (282)
T cd06643         111 QTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDRPY  185 (282)
T ss_pred             HHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccccc--cccccccccccCHhhccccCCCCCCC
Confidence            7899999999   899999999999999999999999999998665432211  12345788999999874     3457


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+....... .+........ .........+..+.+++.+||+.+|++||++.++++
T Consensus       186 ~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         186 DYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEP-PTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             CccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCC-CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            789999999999999999987765433222 2222211111 111122345678999999999999999999999875

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=2.4e-30  Score=187.80  Aligned_cols=148  Identities=20%  Similarity=0.230  Sum_probs=110.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc---------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI---------------------------   54 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------   54 (163)
                      |++.||+|||   +.+++||||||+|||++.++.++++|||++..........                           
T Consensus       109 qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (364)
T cd05599         109 ETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKA  185 (364)
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccc
Confidence            7899999999   8999999999999999999999999999986543221000                           


Q ss_pred             ---------cccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhH
Q 043958           55 ---------KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKD  125 (163)
Q Consensus        55 ---------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (163)
                               ......||+.|+|||.+.+..++.++|+||+||+++++++|..||..... .+....+.........+...
T Consensus       186 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~  264 (364)
T cd05599         186 ETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNP-QETYRKIINWKETLQFPDEV  264 (364)
T ss_pred             cchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCH-HHHHHHHHcCCCccCCCCCC
Confidence                     00123589999999999888899999999999999999999888764432 22333332222112222222


Q ss_pred             HHHHHHHHHHHhccccCcCCCCC---HHHHHH
Q 043958          126 KQVQAFVELAVKCVSESAEDRPT---MIDVAK  154 (163)
Q Consensus       126 ~~~~~~~~li~~cl~~~p~~Rpt---~~~i~~  154 (163)
                      ..++.+.+++.+|+. +|.+|++   +.++++
T Consensus       265 ~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         265 PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            356789999999996 9999997   887765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.96  E-value=3e-31  Score=178.25  Aligned_cols=147  Identities=22%  Similarity=0.267  Sum_probs=117.4

Q ss_pred             HHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc--CCCCccc
Q 043958            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--GDYNEKC   80 (163)
Q Consensus         3 i~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~~   80 (163)
                      .+.||.||-.  ...|||||+||+|||++..|.+|+||||++.....+-.+..   -.|+..|||||-+..  ..|+.++
T Consensus       176 tV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~---daGCrpYmAPERi~p~~~gyDiRS  250 (361)
T KOG1006|consen  176 TVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV---DAGCRPYMAPERIDPSDKGYDIRS  250 (361)
T ss_pred             ehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh---ccCCccccChhccCCccCCcchhh
Confidence            3579999986  67999999999999999999999999999876654433332   368889999998863  3589999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccch--hhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS--EKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|++++|+.+|..|+.......+.+..+..+.++....  .....+..+.+++..|+.+|.+.||.+.++.+
T Consensus       251 DvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  251 DVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             hhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            999999999999999999886665555555555555433222  22346789999999999999999999998865

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.96  E-value=2.6e-30  Score=180.49  Aligned_cols=151  Identities=21%  Similarity=0.278  Sum_probs=106.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-------C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-------G   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-------~   74 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++................++..|+|||.+..       .
T Consensus       108 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  184 (269)
T cd05042         108 EVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPK  184 (269)
T ss_pred             HHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhcccccccc
Confidence            7899999999   89999999999999999999999999999865433322111122335567999998743       3


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhh-hhcc-cchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-ELCI-QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                      .++.++|+||+|+++++++++..+++......+........ .... ........+..+.+++..|| .||++|||++++
T Consensus       185 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v  263 (269)
T cd05042         185 DQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEV  263 (269)
T ss_pred             ccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHH
Confidence            46789999999999999998544444333322222222211 1111 11122345677888999999 599999999999


Q ss_pred             HHHH
Q 043958          153 AKQL  156 (163)
Q Consensus       153 ~~~L  156 (163)
                      ++.|
T Consensus       264 ~~~l  267 (269)
T cd05042         264 HELL  267 (269)
T ss_pred             HHHh
Confidence            9876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=2.8e-30  Score=182.77  Aligned_cols=146  Identities=21%  Similarity=0.312  Sum_probs=113.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       124 ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  198 (296)
T cd06654         124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  198 (296)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccccc--CcccCCccccCHHHHcCCCCCccch
Confidence            7899999999   8999999999999999999999999999987654332211  1235778999999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..||.................  .........+..+.+++.+||..+|++|||+.++++
T Consensus       199 v~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         199 IWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT--PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC--CCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            99999999999999988765544332222111111  111122345678999999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=6.3e-30  Score=177.36  Aligned_cols=142  Identities=18%  Similarity=0.243  Sum_probs=106.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-------CeEECccccccccCCCCCcccccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-------VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~   74 (163)
                      |++.||+|||   +++++|+||||+||+++.++       .++++|||++.......      ...++..|+|||.+.+.
T Consensus       109 ~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~~~~y~aPE~~~~~  179 (259)
T cd05037         109 QLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSRE------ERVERIPWIAPECIRNG  179 (259)
T ss_pred             HHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeCCCCccccccccc------ccccCCCccChhhhcCC
Confidence            7899999999   89999999999999999887       79999999987654311      22355679999998876


Q ss_pred             --CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           75 --DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        75 --~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                        .++.++|+||+|+++++++++..+++......+......... ....+    ....+.+++.+||..+|++|||+.++
T Consensus       180 ~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~li~~~l~~~p~~Rpt~~~i  254 (259)
T cd05037         180 QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH-RLPMP----DCAELANLINQCWTYDPTKRPSFRAI  254 (259)
T ss_pred             CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC-CCCCC----CchHHHHHHHHHhccChhhCCCHHHH
Confidence              688899999999999999986444443322221111111111 01111    12689999999999999999999999


Q ss_pred             HHHHH
Q 043958          153 AKQLR  157 (163)
Q Consensus       153 ~~~L~  157 (163)
                      ++.|+
T Consensus       255 l~~l~  259 (259)
T cd05037         255 LRDLN  259 (259)
T ss_pred             HHhcC
Confidence            98763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.5e-30  Score=190.89  Aligned_cols=138  Identities=19%  Similarity=0.294  Sum_probs=118.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +|+.||.|||   +++||+||+|.+|||+|..|.+||+|||+++.......  .+.+.-||+.|||||++.+..|+.++|
T Consensus       476 ev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~--~TsTfCGTpey~aPEil~e~~Yt~aVD  550 (694)
T KOG0694|consen  476 EVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD--RTSTFCGTPEFLAPEVLTEQSYTRAVD  550 (694)
T ss_pred             HHHHHHHHHH---hcCceeeecchhheEEcccCcEEecccccccccCCCCC--ccccccCChhhcChhhhccCcccchhh
Confidence            5789999999   99999999999999999999999999999987653333  233567999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      -||||+++|+|+.|..||. .+.-+++.+.++..++..    +...+.+..+++++++..+|++|.-.
T Consensus       551 WW~lGVLlyeML~Gq~PF~-gddEee~FdsI~~d~~~y----P~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  551 WWGLGVLLYEMLVGESPFP-GDDEEEVFDSIVNDEVRY----PRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHHHHHHHcCCCCCC-CCCHHHHHHHHhcCCCCC----CCcccHHHHHHHHHHhccCcccccCC
Confidence            9999999999999999876 556667888877776433    34466889999999999999999754

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.96  E-value=3.3e-30  Score=179.70  Aligned_cols=147  Identities=20%  Similarity=0.306  Sum_probs=109.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||.|||   ..+++|+||||+||+++.++.++++|||++.........  .....++..|+|||.+.   ...++.
T Consensus       114 ~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  188 (267)
T cd06645         114 ETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK--RKSFIGTPYWMAPEVAAVERKGGYNQ  188 (267)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc--cccccCcccccChhhhccccCCCCCc
Confidence            7899999999   899999999999999999999999999998765432211  12335788999999874   445888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcc-cchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI-QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+............ ....... ........+..+.+++.+||..+|++|||++++++
T Consensus       189 ~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         189 LCDIWAVGITAIELAELQPPMFDLHPMRALFLM-TKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             hhhhHHHHHHHHHHhcCCCCcccccchhhHHhh-hccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            999999999999999998887654433222211 1111111 11111134567899999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=8e-30  Score=177.10  Aligned_cols=148  Identities=22%  Similarity=0.315  Sum_probs=112.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC---CCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG---DYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~   78 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|++||.+.+.   .++.
T Consensus       109 ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~y~~Pe~~~~~~~~~~~~  183 (262)
T cd06613         109 ETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKR--KSFIGTPYWMAPEVAAVERKGGYDG  183 (262)
T ss_pred             HHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhhcc--ccccCCccccCchhhcccccCCcCc
Confidence            7899999999   8999999999999999999999999999987654332111  123577789999998766   7888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+............................+.++.+++.+||..+|..|||+.+++.
T Consensus       184 ~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         184 KCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            9999999999999999988876443333222111110011112223456678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=5.7e-30  Score=186.94  Aligned_cols=149  Identities=22%  Similarity=0.242  Sum_probs=108.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC-----------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET-----------------------------   52 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~-----------------------------   52 (163)
                      |++.||+|||   ..+|+||||||+||+++.++.++|+|||++........                             
T Consensus       109 qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (381)
T cd05626         109 ELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRC  185 (381)
T ss_pred             HHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCccccccccccccc
Confidence            7899999999   89999999999999999999999999999753211000                             


Q ss_pred             ----------------cccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhh
Q 043958           53 ----------------HIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE  116 (163)
Q Consensus        53 ----------------~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  116 (163)
                                      ........||..|+|||.+.+..++.++|+||+||+++++++|..||....... ....+....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~i~~~~  264 (381)
T cd05626         186 GDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTE-TQLKVINWE  264 (381)
T ss_pred             ccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHH-HHHHHHccc
Confidence                            000113468999999999988889999999999999999999998876543322 222222111


Q ss_pred             hcccchhhHHHHHHHHHHHHh--ccccCcCCCCCHHHHHH
Q 043958          117 LCIQSSEKDKQVQAFVELAVK--CVSESAEDRPTMIDVAK  154 (163)
Q Consensus       117 ~~~~~~~~~~~~~~~~~li~~--cl~~~p~~Rpt~~~i~~  154 (163)
                      .....+.....++++.+++.+  |+..++..|+++.++++
T Consensus       265 ~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         265 NTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             cccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            112222223456788899988  55566667999999986

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4e-30  Score=181.10  Aligned_cols=146  Identities=23%  Similarity=0.252  Sum_probs=110.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++.........   ....++..|+|||.+.+..++.++|
T Consensus       110 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05605         110 EITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI---RGRVGTVGYMAPEVVKNERYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc---ccccCCCCccCcHHhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998765433321   1235788999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|++++++++|..||..... ..........-...........+..+.+++.+||+.||++||     +++++++
T Consensus       184 iws~G~~l~el~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         184 WWGLGCLIYEMIEGKSPFRQRKE-KVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             chhHHHHHHHHHHCCCCCCCCch-hhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            99999999999999887754321 111111111000011112234567899999999999999999     7878765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.96  E-value=4.6e-30  Score=180.40  Aligned_cols=148  Identities=15%  Similarity=0.154  Sum_probs=109.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      ||+.||.|||   .++++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+.. ++.++
T Consensus       107 qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  181 (284)
T cd07839         107 QLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSI  181 (284)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc--CCCccccCCcChHHHhCCcccCcHH
Confidence            7899999999   8999999999999999999999999999987554332211  1235678899999887644 68899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhh------------------hccc-------chhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE------------------LCIQ-------SSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-------~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..|++......+.+......-                  ....       .......++.+.+++
T Consensus       182 DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  261 (284)
T cd07839         182 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLL  261 (284)
T ss_pred             HHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHH
Confidence            999999999999999888765444332222111000                  0000       001123457889999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||++|||+.+++.
T Consensus       262 ~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         262 QNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HHHhcCChhhcCCHHHHhc
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=3e-30  Score=184.30  Aligned_cols=140  Identities=22%  Similarity=0.224  Sum_probs=109.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++..........  ....|+..|+|||.+.+..++.++|
T Consensus       106 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~D  180 (318)
T cd05582         106 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA--YSFCGTVEYMAPEVVNRRGHTQSAD  180 (318)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCce--ecccCChhhcCHHHHcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999987654332211  1346888999999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      +||+|++++++++|..|+.... ..+....+......    .....+..+.+++.+||+.||++||++.+
T Consensus       181 iwslG~il~el~tg~~p~~~~~-~~~~~~~i~~~~~~----~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         181 WWSFGVLMFEMLTGSLPFQGKD-RKETMTMILKAKLG----MPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             eeccceEeeeeccCCCCCCCCC-HHHHHHHHHcCCCC----CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            9999999999999988875433 23333333222211    12234578899999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.96  E-value=1.3e-30  Score=188.64  Aligned_cols=147  Identities=18%  Similarity=0.223  Sum_probs=121.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCC---------------C--------CC----cc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD---------------G--------ET----HI   54 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~---------------~--------~~----~~   54 (163)
                      +++.|+.-||   ..|+|||||||+|+|+|..|.+||+|||++.-...               .        ..    ..
T Consensus       249 E~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  325 (550)
T KOG0605|consen  249 ETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPR  325 (550)
T ss_pred             HHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCcccccccccc
Confidence            4677999999   99999999999999999999999999999842210               0        00    00


Q ss_pred             c------------------ccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhh
Q 043958           55 K------------------DAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE  116 (163)
Q Consensus        55 ~------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  116 (163)
                      .                  ....+||+-|||||++.+..|+..+|.||+||++||++.|.+|| .++...+.+.++....
T Consensus       326 ~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF-~s~tp~~T~rkI~nwr  404 (550)
T KOG0605|consen  326 STMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPF-CSETPQETYRKIVNWR  404 (550)
T ss_pred             chhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHh
Confidence            0                  12347999999999999999999999999999999999997665 5677788889888888


Q ss_pred             hcccchhhHHHHHHHHHHHHhccccCcCCCCC---HHHHH
Q 043958          117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPT---MIDVA  153 (163)
Q Consensus       117 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt---~~~i~  153 (163)
                      .....+.....+.++.+||.+|+. ||++|.-   ++||.
T Consensus       405 ~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK  443 (550)
T KOG0605|consen  405 ETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK  443 (550)
T ss_pred             hhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence            778888777888999999999998 9999964   55543

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=6.9e-30  Score=178.20  Aligned_cols=151  Identities=17%  Similarity=0.255  Sum_probs=114.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccc-cCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-AIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++............ ....++..|++||.+.+..++.++
T Consensus       114 ~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~  190 (267)
T cd05066         114 GIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSAS  190 (267)
T ss_pred             HHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchh
Confidence            7889999999   899999999999999999999999999999776543322111 112234579999999888899999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||+|++++++++ +..|+... ...+........ ...  +.....+..+.+++.+||+.+|++||++.++++.|+++
T Consensus       191 Dv~slG~~l~ell~~g~~p~~~~-~~~~~~~~~~~~-~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         191 DVWSYGIVMWEVMSYGERPYWEM-SNQDVIKAIEEG-YRL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             hhHHHHHHHHHHhcCCCCCcccC-CHHHHHHHHhCC-CcC--CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            99999999999886 66665433 222333332222 111  22234567899999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.96  E-value=4.1e-30  Score=184.30  Aligned_cols=139  Identities=17%  Similarity=0.231  Sum_probs=105.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++..........  ....|+..|+|||.+.+..++.++|
T Consensus       104 qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  178 (327)
T cd05617         104 EICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTT--STFCGTPNYIAPEILRGEEYGFSVD  178 (327)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCce--ecccCCcccCCHHHHCCCCCCchhe
Confidence            7899999999   8999999999999999999999999999986532221111  1345889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccc-----h-hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT-----F-DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|++++++++|..||.....     . ..+.........    ..+...+..+.+++.+||+.||++|+++
T Consensus       179 iwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         179 WWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI----RIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             eehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC----CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            99999999999999888742111     1 111111111111    1122345778999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.96  E-value=5.2e-30  Score=194.05  Aligned_cols=152  Identities=16%  Similarity=0.223  Sum_probs=119.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccc-------cCccccccccCcccc---
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD-------AIPIGIMGFVATEYV---   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-------~~~~~~~~~~~PE~~---   71 (163)
                      |+++|+++||.- ..++||||||-+|+|++.+|..||||||.+............       -....|+.|++||.+   
T Consensus       152 dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly  230 (738)
T KOG1989|consen  152 DVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY  230 (738)
T ss_pred             HHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh
Confidence            688999999954 567999999999999999999999999998654322211000       012467899999988   


Q ss_pred             ccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           72 TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        72 ~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      .+.+++.|+|||+|||++|-|+....||-......     ++.+++.  .+....++..+++||..||+.+|++||++-+
T Consensus       231 sg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la-----Ilng~Y~--~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Q  303 (738)
T KOG1989|consen  231 SGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA-----ILNGNYS--FPPFPNYSDRLKDLIRTMLQPNPDERPNIYQ  303 (738)
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee-----EEecccc--CCCCccHHHHHHHHHHHHhccCcccCCCHHH
Confidence            35678999999999999999999988876443333     3344433  3334678899999999999999999999999


Q ss_pred             HHHHHHHHhh
Q 043958          152 VAKQLRQAYR  161 (163)
Q Consensus       152 i~~~L~~~~~  161 (163)
                      ++..+.++..
T Consensus       304 v~~~~~~l~~  313 (738)
T KOG1989|consen  304 VLEEIFELAN  313 (738)
T ss_pred             HHHHHHHHhc
Confidence            9999988765

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.96  E-value=8.8e-30  Score=176.39  Aligned_cols=148  Identities=21%  Similarity=0.329  Sum_probs=114.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++............ ...++..|++||.+.+..++.++|
T Consensus       111 ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~D  186 (258)
T smart00219      111 QIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKK-GGKLPIRWMAPESLKDGKFTSKSD  186 (258)
T ss_pred             HHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecccccccccc-cCCCcccccChHHhccCCCCcchh
Confidence            7899999999   899999999999999999999999999999776554222221 123567899999998778999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +||+|++++++++...+++.................   .......+.++.+++.+|+..+|++|||+.++++.|
T Consensus       187 i~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      187 VWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR---LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            999999999999855555544444444433333221   111223677899999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.96  E-value=2.5e-30  Score=179.37  Aligned_cols=148  Identities=28%  Similarity=0.395  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-cCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-TGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-~~~~~~~~   80 (163)
                      |++.||++||   +.+++|+||||+||+++.++.++++|||.+........  ......++..|+|||.+. +..++.++
T Consensus       106 qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  180 (260)
T PF00069_consen  106 QILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE--NFNPFVGTPEYMAPEVLQQGKKYTRKS  180 (260)
T ss_dssp             HHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS--EBSSSSSSGGGSCHHHHTTTSSBSTHH
T ss_pred             cccccccccc---cccccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence            7899999999   89999999999999999999999999999876522211  222345788999999988 77789999


Q ss_pred             ceeecchhhHHHhhhcccccccc--chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECN--TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+....  ...........................+.+++.+||+.+|++|||+.++++
T Consensus       181 Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  181 DIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             cccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999988876541  112222222221111111111112378999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.96  E-value=4.2e-30  Score=179.56  Aligned_cols=145  Identities=20%  Similarity=0.312  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      |++.||+|||   +++++|+|+||+||+++.++.++++|||++.........  .....++..|+|||.+.+     ..+
T Consensus       119 qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~~  193 (272)
T cd06637         119 EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATY  193 (272)
T ss_pred             HHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCceeccccccc--CCcccccccccCHhHhccccCcCCCC
Confidence            7899999999   899999999999999999999999999998765432221  123457889999998863     357


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++|+++++..|+........... .....  .........+..+.+++.+||..+|++|||+.++++
T Consensus       194 ~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         194 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFL-IPRNP--APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccCHHHHHHH-HhcCC--CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            8899999999999999999887753332221111 11111  111112234568999999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.96  E-value=1.1e-29  Score=175.96  Aligned_cols=144  Identities=20%  Similarity=0.286  Sum_probs=113.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||+..+..++.++|
T Consensus       109 ~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  183 (256)
T cd08529         109 QILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFA--NTIVGTPYYLSPELCEDKPYNEKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchh--hccccCccccCHHHhcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999987665433222  1235778899999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.... ..............   ......+.++.+++.+||+.+|++||++.++++
T Consensus       184 i~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         184 VWALGVVLYECCTGKHPFDANN-QGALILKIIRGVFP---PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCC---CCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            9999999999999988865433 23333333322211   112245678999999999999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.96  E-value=3.6e-30  Score=181.33  Aligned_cols=148  Identities=21%  Similarity=0.328  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC---CCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG---DYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~   78 (163)
                      |++.||+|||+  ..+++||||||+||+++.++.++++|||++..........   ...++..|++||.+.+.   .++.
T Consensus       115 ~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  189 (288)
T cd06616         115 ATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKT---RDAGCRPYMAPERIDPSARDGYDV  189 (288)
T ss_pred             HHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccc---cccCccCccCHHHhccccccCCcc
Confidence            68899999993  3599999999999999999999999999987654332221   22477889999998765   5888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhh-hcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE-LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|++++++++|..|+.......+.+....... ...........+.++.+++.+||+.+|++|||++++++
T Consensus       190 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         190 RSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             hhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999999888754332222222211111 11111122346778999999999999999999999987

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=4.6e-30  Score=178.39  Aligned_cols=149  Identities=25%  Similarity=0.335  Sum_probs=113.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++............ ....+..|+|||.+.+..++.++|
T Consensus       111 ~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~D  186 (261)
T cd05034         111 QIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTARE-GAKFPIKWTAPEAANYGRFTIKSD  186 (261)
T ss_pred             HHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhh-ccCCCccccCHHHhccCCcCchhH
Confidence            6889999999   899999999999999999999999999998766532211111 122445799999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +||+|++++++++ +..|+ ................   ..+.....+..+.+++.+||..+|++||++.++.+.|+.
T Consensus       187 i~slG~il~~l~t~g~~p~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         187 VWSFGILLTEIVTYGRVPY-PGMTNREVLEQVERGY---RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            9999999999998 55544 4444333333332221   112222346789999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=7.5e-30  Score=195.01  Aligned_cols=153  Identities=20%  Similarity=0.300  Sum_probs=122.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCc-cccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP-IGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.|++||+   +++++|||+-+.|||++.+..+|++|||+++.............. .-...|||||.+....|+.++
T Consensus       426 QIa~GMe~L~---~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kS  502 (609)
T KOG0200|consen  426 QIANGMEYLA---SVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKS  502 (609)
T ss_pred             HHHHHHHHHh---hCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccc
Confidence            8999999999   899999999999999999999999999999876554433321111 124469999999998999999


Q ss_pred             ceeecchhhHHHhhhccccccccc-hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNT-FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      ||||+|+++||+++.+.+++..-. ..+++. .+....  +...+..++.++.++++.||+.+|++||++.++.+.|+..
T Consensus       503 DVWSfGI~L~EifsLG~~PYp~~~~~~~l~~-~l~~G~--r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  503 DVWSFGILLWEIFTLGGTPYPGIPPTEELLE-FLKEGN--RMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             hhhHHHHHHHHHhhCCCCCCCCCCcHHHHHH-HHhcCC--CCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            999999999999987776665433 445544 333332  3344455688999999999999999999999999999985


Q ss_pred             h
Q 043958          160 Y  160 (163)
Q Consensus       160 ~  160 (163)
                      .
T Consensus       580 l  580 (609)
T KOG0200|consen  580 L  580 (609)
T ss_pred             H
Confidence            3

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.96  E-value=7.6e-30  Score=184.46  Aligned_cols=146  Identities=25%  Similarity=0.297  Sum_probs=126.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC----CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE----DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~----~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      |++.+++|||   +.+++|||+||+|+|+..    ++.++++|||++.......   ......||+.|+|||.+.+.+|+
T Consensus       143 ~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~---~~~~~~Gtp~y~APEvl~~~~y~  216 (382)
T KOG0032|consen  143 QILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE---RLHTIVGTPEYVAPEVLGGRPYG  216 (382)
T ss_pred             HHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc---eEeeecCCccccCchhhcCCCCC
Confidence            7899999999   899999999999999943    3579999999998887622   22345799999999999989999


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ..+|+||+|++.|.|++|..||.... .......+..+++.+....+...+..++++++.++..||..|+|+.++++
T Consensus       217 ~~~DiWS~Gvi~yiLL~G~~PF~~~~-~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  217 DEVDVWSIGVILYILLSGVPPFWGET-EFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             cccchhHHHHHHHHHhhCCCCCcCCC-hhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence            99999999999999999988877544 34455577788877888888899999999999999999999999999987

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=7.1e-30  Score=186.48  Aligned_cols=148  Identities=20%  Similarity=0.245  Sum_probs=108.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCC------------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE------------------------------   51 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------   51 (163)
                      ||+.||+|||   +.+|+||||||+|||++.++.++|+|||++.......                              
T Consensus       109 qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (382)
T cd05625         109 ELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRC  185 (382)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccc
Confidence            7899999999   8999999999999999999999999999975321000                              


Q ss_pred             ---------------CcccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhh
Q 043958           52 ---------------THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE  116 (163)
Q Consensus        52 ---------------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  116 (163)
                                     .........||+.|+|||.+.+..++.++|+||+||+++++++|..||....... ....+....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~~  264 (382)
T cd05625         186 GDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLE-TQMKVINWQ  264 (382)
T ss_pred             cccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHH-HHHHHHccC
Confidence                           0000112358899999999998889999999999999999999988876544332 222222222


Q ss_pred             hcccchhhHHHHHHHHHHHHhccccCcCCCCC---HHHHHH
Q 043958          117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPT---MIDVAK  154 (163)
Q Consensus       117 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt---~~~i~~  154 (163)
                      .....+.....++++.+++.+++ .+|++|++   +++++.
T Consensus       265 ~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         265 TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            12222333345677888888876 49999987   777664

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.96  E-value=9.4e-30  Score=178.63  Aligned_cols=144  Identities=17%  Similarity=0.286  Sum_probs=110.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++........    ....++..|+|||.+.+..++.++|
T Consensus       103 qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~D  175 (279)
T cd06619         103 AVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA----KTYVGTNAYMAPERISGEQYGIHSD  175 (279)
T ss_pred             HHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc----cCCCCChhhcCceeecCCCCCCcch
Confidence            7899999999   89999999999999999999999999999876543221    1235788999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhcc------chhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIV------DPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|++++++++|..|+..........      .......  .........++++.+++.+||+.+|++||+++++++
T Consensus       176 vwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~  252 (279)
T cd06619         176 VWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED--PPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD  252 (279)
T ss_pred             HHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC--CCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            9999999999999988875422211111      0000000  011111234567999999999999999999999876

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.96  E-value=6.9e-30  Score=180.81  Aligned_cols=146  Identities=20%  Similarity=0.306  Sum_probs=113.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       123 ~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  197 (296)
T cd06655         123 ECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  197 (296)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccC--CCcCCCccccCcchhcCCCCCchhh
Confidence            6889999999   8999999999999999999999999999987654432221  1235778899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++|+++++..|+................  ..........+..+.+++.+||..+|++|||+.++++
T Consensus       198 v~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         198 IWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG--TPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--CcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            9999999999999988876554433322111111  1111223345678999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=1.2e-29  Score=176.15  Aligned_cols=141  Identities=16%  Similarity=0.248  Sum_probs=105.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC--------eEECccccccccCCCCCcccccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--------AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~--------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.||+|||   +++++||||||+||+++.++.        ++++|||++.......      ...++..|+|||.+.+
T Consensus       108 qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~------~~~~~~~y~aPE~~~~  178 (258)
T cd05078         108 QLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKE------ILLERIPWVPPECIEN  178 (258)
T ss_pred             HHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEecccccccccCCch------hccccCCccCchhccC
Confidence            7899999999   899999999999999987765        5899999875543221      2346778999999976


Q ss_pred             C-CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           74 G-DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        74 ~-~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                      . .++.++|+||+|+++|+++++..+++.......... ........    ......++.+++.+||+.+|++|||++++
T Consensus       179 ~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~i  253 (258)
T cd05078         179 PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYEDRHQL----PAPKWTELANLINQCMDYEPDFRPSFRAI  253 (258)
T ss_pred             CCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHccccC----CCCCcHHHHHHHHHHhccChhhCCCHHHH
Confidence            4 478899999999999999998655554333222111 11111111    11233678999999999999999999999


Q ss_pred             HHHH
Q 043958          153 AKQL  156 (163)
Q Consensus       153 ~~~L  156 (163)
                      ++.|
T Consensus       254 l~~l  257 (258)
T cd05078         254 IRDL  257 (258)
T ss_pred             HHhc
Confidence            9876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=3e-29  Score=165.04  Aligned_cols=141  Identities=19%  Similarity=0.173  Sum_probs=107.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+      ||+||+++.++.+++  ||++.......       ..++..|+|||.+.+..++.++|
T Consensus        25 qi~~~L~~lH---~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-------~~g~~~y~aPE~~~~~~~~~~~D   86 (176)
T smart00750       25 QCLRALRELH---RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-------SRVDPYFMAPEVIQGQSYTEKAD   86 (176)
T ss_pred             HHHHHHHHHH---hcC------CcccEeEcCccceee--ccceEeecccc-------CCCcccccChHHhcCCCCcchhh
Confidence            7899999999   666      999999999999999  99987664432       14788999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcc---cchhhHHHHH--HHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI---QSSEKDKQVQ--AFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      |||+|+++|+++++..|+.........+..........   ..........  .+.+++.+||+.+|++||++.++++.+
T Consensus        87 iwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~  166 (176)
T smart00750       87 IYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHC  166 (176)
T ss_pred             HHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHH
Confidence            99999999999999988765443333332222211111   0011222333  699999999999999999999999988


Q ss_pred             HHHh
Q 043958          157 RQAY  160 (163)
Q Consensus       157 ~~~~  160 (163)
                      ..+.
T Consensus       167 ~~~~  170 (176)
T smart00750      167 RALF  170 (176)
T ss_pred             HHHH
Confidence            7654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=6.7e-30  Score=185.50  Aligned_cols=150  Identities=18%  Similarity=0.212  Sum_probs=108.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc----------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH----------------------------   53 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------   53 (163)
                      |++.||+|||   +++++||||||+|||++.++.++|+|||++.........                            
T Consensus       109 qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (363)
T cd05628         109 ETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETW  185 (363)
T ss_pred             HHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchh
Confidence            7899999999   899999999999999999999999999998754321100                            


Q ss_pred             -----ccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHH
Q 043958           54 -----IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQV  128 (163)
Q Consensus        54 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (163)
                           .......||+.|+|||.+.+..++.++|+||+||+++++++|..||... ...+....+.........+.....+
T Consensus       186 ~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s  264 (363)
T cd05628         186 KRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSE-TPQETYKKVMNWKETLIFPPEVPIS  264 (363)
T ss_pred             hhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCcCcccCCCcCCCC
Confidence                 0011346899999999999888999999999999999999998887543 3333333333221111122222345


Q ss_pred             HHHHHHHHhccc--cCcCCCCCHHHHHHH
Q 043958          129 QAFVELAVKCVS--ESAEDRPTMIDVAKQ  155 (163)
Q Consensus       129 ~~~~~li~~cl~--~~p~~Rpt~~~i~~~  155 (163)
                      +++++++.+++.  .++..||+++++++.
T Consensus       265 ~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         265 EKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            678888887443  233456899998763

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.5e-30  Score=186.08  Aligned_cols=148  Identities=19%  Similarity=0.224  Sum_probs=108.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc------------c---------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH------------I---------------   54 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~---------------   54 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||+++........            .               
T Consensus       109 ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (377)
T cd05629         109 ECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSIN  185 (377)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999   899999999999999999999999999998633210000            0               


Q ss_pred             ------------------cccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhh
Q 043958           55 ------------------KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE  116 (163)
Q Consensus        55 ------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  116 (163)
                                        ......||+.|+|||.+.+..++.++|+||+||+++++++|..||..... .+.+..+....
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-~~~~~~i~~~~  264 (377)
T cd05629         186 LTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENS-HETYRKIINWR  264 (377)
T ss_pred             ccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCH-HHHHHHHHccC
Confidence                              00023588999999999888899999999999999999999888754332 23333332211


Q ss_pred             hcccchhhHHHHHHHHHHHHhccccCcCCC---CCHHHHHH
Q 043958          117 LCIQSSEKDKQVQAFVELAVKCVSESAEDR---PTMIDVAK  154 (163)
Q Consensus       117 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~R---pt~~~i~~  154 (163)
                      .....+.....+..+.+++.+|+. +|.+|   +++.+++.
T Consensus       265 ~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~  304 (377)
T cd05629         265 ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS  304 (377)
T ss_pred             CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence            112222222356789999999997 66665   58888876

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.96  E-value=9.5e-30  Score=176.31  Aligned_cols=145  Identities=15%  Similarity=0.205  Sum_probs=113.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||.+..........  ....++..|+|||.+.+..++.++|
T Consensus       108 ~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~D  182 (255)
T cd08219         108 QMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYA--CTYVGTPYYVPPEIWENMPYNNKSD  182 (255)
T ss_pred             HHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccccc--ccccCCccccCHHHHccCCcCchhh
Confidence            7899999999   8999999999999999999999999999987654332211  1235778899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++++++++..|+... ...........+...   +.....+..+.+++.+||+.+|++|||+.+++..
T Consensus       183 v~slG~i~~~l~~g~~p~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         183 IWSLGCILYELCTLKHPFQAN-SWKNLILKVCQGSYK---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             hhhhchhheehhhccCCCCCC-CHHHHHHHHhcCCCC---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            999999999999998887543 333333332222211   1223456789999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=1.2e-29  Score=178.01  Aligned_cols=153  Identities=18%  Similarity=0.272  Sum_probs=114.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||.+........... .....++..|++||.+.+..++.++
T Consensus       117 ~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~  193 (284)
T cd05038         117 QICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSAS  193 (284)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCccc
Confidence            7899999999   89999999999999999999999999999977653322211 1122344569999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccchh-h---------cc---chhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFD-E---------IV---DPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~-~---------~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      |+||+|+++++++++..|+....... .         ..   .......  ...+....++.++.+++.+||+.+|++||
T Consensus       194 Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  271 (284)
T cd05038         194 DVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG--ERLPRPPSCPDEVYDLMKLCWEAEPQDRP  271 (284)
T ss_pred             chHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC--CcCCCCccCCHHHHHHHHHHhccChhhCC
Confidence            99999999999999887754321111 0         00   0011111  11122234557899999999999999999


Q ss_pred             CHHHHHHHHHHH
Q 043958          148 TMIDVAKQLRQA  159 (163)
Q Consensus       148 t~~~i~~~L~~~  159 (163)
                      |+.++++.|+++
T Consensus       272 t~~ei~~~l~~i  283 (284)
T cd05038         272 SFADLILIVDRL  283 (284)
T ss_pred             CHHHHHHHHhhc
Confidence            999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=1e-29  Score=178.70  Aligned_cols=153  Identities=18%  Similarity=0.285  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   ..+++|+||||+||+++.++.++++|||++........... .....++..|+|||.+.+..++.++
T Consensus       116 ~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  192 (284)
T cd05081         116 QICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVAS  192 (284)
T ss_pred             HHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHH
Confidence            7899999999   89999999999999999999999999999987654332211 1111234469999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccc-hhhccch-------------hhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNT-FDEIVDP-------------VIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~-~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      |+||+|+++++++++..+...... .......             .....  ...+.....+..+.+++.+||+.+|++|
T Consensus       193 Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~cl~~~p~~R  270 (284)
T cd05081         193 DVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN--GRLPAPPGCPAEIYAIMKECWNNDPSQR  270 (284)
T ss_pred             HHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC--CcCCCCCCCCHHHHHHHHHHccCChhhC
Confidence            999999999999987554321110 0000000             00111  0111122345789999999999999999


Q ss_pred             CCHHHHHHHHHHH
Q 043958          147 PTMIDVAKQLRQA  159 (163)
Q Consensus       147 pt~~~i~~~L~~~  159 (163)
                      ||+.++++.|+.+
T Consensus       271 pt~~ei~~~l~~~  283 (284)
T cd05081         271 PSFSELALQVEAI  283 (284)
T ss_pred             CCHHHHHHHHHhc
Confidence            9999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.96  E-value=1.1e-29  Score=175.79  Aligned_cols=146  Identities=23%  Similarity=0.346  Sum_probs=112.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   ..+++|+|++|+||+++.++.++++|||++..........  ....++..|++||.+.+..++.++|
T Consensus       107 ~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~D  181 (256)
T cd06612         107 QTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYNNKAD  181 (256)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcccc--ccccCCccccCHHHHhcCCCCchhh
Confidence            6889999999   8999999999999999999999999999987665443211  1234778899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+............. . ............+..+.+++.+||+.+|++|||+.++++
T Consensus       182 i~s~G~il~~l~~g~~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         182 IWSLGITAIEMAEGKPPYSDIHPMRAIFMIP-N-KPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcchhhhhhhhc-c-CCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            9999999999999988765433322221111 1 111112223345678999999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.96  E-value=7.1e-30  Score=188.01  Aligned_cols=139  Identities=18%  Similarity=0.204  Sum_probs=115.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee-CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.++.|||   +++++|||+||+|||+ +..+.++++|||.++..+..     ..+..-|..|.|||......|+.++
T Consensus       423 ~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~ac  494 (612)
T KOG0603|consen  423 ELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEAC  494 (612)
T ss_pred             HHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcch
Confidence            6889999999   9999999999999999 69999999999999777655     1133467789999999988899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++|+|++|..|+.......++...+..++      .....+..+++|+.+||+.||.+|+++.++..
T Consensus       495 D~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~------~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  495 DWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK------FSECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             hhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc------cccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            999999999999999998764433334444443332      23677889999999999999999999999875

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=1.4e-29  Score=181.24  Aligned_cols=138  Identities=17%  Similarity=0.272  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||+++........  .....|+..|+|||.+.+..++.++|
T Consensus       109 qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  183 (323)
T cd05615         109 EISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVT--TRTFCGTPDYIAPEIIAYQPYGKSVD  183 (323)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCcc--ccCccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   899999999999999999999999999998654322211  12345889999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|++++++++|..|+... ....+...+.......    +...+..+.+++.+||+.+|.+|++.
T Consensus       184 iwslGvil~elltG~~pf~~~-~~~~~~~~i~~~~~~~----p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         184 WWAYGVLLYEMLAGQPPFDGE-DEDELFQSIMEHNVSY----PKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCC----CccCCHHHHHHHHHHcccCHhhCCCC
Confidence            999999999999998876533 3334444444333221    22345788999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=9.5e-30  Score=176.34  Aligned_cols=148  Identities=22%  Similarity=0.310  Sum_probs=110.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||.+............ ....+..|++||.+.++.++.++|
T Consensus       108 ~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~~~aPe~~~~~~~~~~~D  183 (256)
T cd05112         108 DVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSST-GTKFPVKWSSPEVFSFSKYSSKSD  183 (256)
T ss_pred             HHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCcccccC-CCccchhhcCHhHhccCCcChHHH
Confidence            6789999999   899999999999999999999999999998765433221111 223456899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +||+|+++|++++...+++......+.......... .  ......+..+.+++.+||+.+|++|||+.++++.|
T Consensus       184 v~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         184 VWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFR-L--YKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCC-C--CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            999999999999843444434433333333222111 1  11112457899999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.96  E-value=5.9e-30  Score=182.47  Aligned_cols=96  Identities=18%  Similarity=0.211  Sum_probs=79.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee----CCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccC-C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTG-D   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~----~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~-~   75 (163)
                      |++.||.|||   +.+++||||||+||++    +.++.++|+|||+++........ .......++..|+|||.+.+. .
T Consensus       116 qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  192 (317)
T cd07867         116 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  192 (317)
T ss_pred             HHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCc
Confidence            7899999999   8999999999999999    56678999999999766543221 112234678899999998764 4


Q ss_pred             CCcccceeecchhhHHHhhhccccc
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHI  100 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~  100 (163)
                      ++.++|+||+|+++++++++..||.
T Consensus       193 ~~~~~DiwSlG~il~el~tg~~~f~  217 (317)
T cd07867         193 YTKAIDIWAIGCIFAELLTSEPIFH  217 (317)
T ss_pred             cCcHHHHHhHHHHHHHHHhCCCCcc
Confidence            7889999999999999999987764

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=1e-29  Score=182.59  Aligned_cols=145  Identities=16%  Similarity=0.227  Sum_probs=106.6

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   + .+++|+||||+||+++.++.++++|||++........    ....++..|+|||.+.+..++.++
T Consensus       111 ~l~~~l~~lH---~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~  183 (333)
T cd06650         111 AVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQS  183 (333)
T ss_pred             HHHHHHHHHH---hcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc----ccCCCCccccCHHHhcCCCCCcHH
Confidence            6889999999   5 4799999999999999999999999999865533221    123578899999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccch--hhccchhh----------------------------------------hhhhc
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTF--DEIVDPVI----------------------------------------REELC  118 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~--~~~~~~~~----------------------------------------~~~~~  118 (163)
                      |+||+||++++++++..|+......  ...+....                                        .... 
T Consensus       184 DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  262 (333)
T cd06650         184 DIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEP-  262 (333)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCC-
Confidence            9999999999999998876532210  00000000                                        0000 


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          119 IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       119 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+.......+.++++|+.+||+.||++|||+.+++.
T Consensus       263 ~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         263 PPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             CccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence            000000123467899999999999999999999975

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.96  E-value=5.3e-30  Score=186.81  Aligned_cols=148  Identities=21%  Similarity=0.235  Sum_probs=108.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCC------------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE------------------------------   51 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~------------------------------   51 (163)
                      ||+.||+|||   +++|+||||||+||+++.++.++|+|||++.......                              
T Consensus       109 qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (376)
T cd05598         109 ELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRL  185 (376)
T ss_pred             HHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccc
Confidence            7899999999   8999999999999999999999999999974321000                              


Q ss_pred             -----------CcccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhccc
Q 043958           52 -----------THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ  120 (163)
Q Consensus        52 -----------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (163)
                                 .........|++.|+|||.+.+..++.++|+||+||+++++++|..||....... ....+........
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~-~~~~i~~~~~~~~  264 (376)
T cd05598         186 KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAE-TQLKVINWETTLH  264 (376)
T ss_pred             cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHH-HHHHHhccCcccc
Confidence                       0000112468899999999998889999999999999999999988876544322 2222222111122


Q ss_pred             chhhHHHHHHHHHHHHhccccCcCCCC---CHHHHHH
Q 043958          121 SSEKDKQVQAFVELAVKCVSESAEDRP---TMIDVAK  154 (163)
Q Consensus       121 ~~~~~~~~~~~~~li~~cl~~~p~~Rp---t~~~i~~  154 (163)
                      .+.....+..+.+++.+|+ .+|++|+   ++.++++
T Consensus       265 ~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         265 IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence            2222345677888999876 5999999   8888875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.96  E-value=6.5e-30  Score=188.61  Aligned_cols=152  Identities=20%  Similarity=0.276  Sum_probs=125.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.+|+|||   +++++||||...|||+.....+|++|||+++.+.+....... ...-...||+||.+....++.++|
T Consensus       499 Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS-~~kLPIKWmaPESINfRrFTtASD  574 (974)
T KOG4257|consen  499 QICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS-RGKLPIKWMAPESINFRRFTTASD  574 (974)
T ss_pred             HHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc-ccccceeecCccccchhcccchhh
Confidence            8999999999   999999999999999999999999999999888766544332 233456899999999999999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||.||+-+||++. |..||+.- ...++.-.+..+   .+.+.+++|++.+..++.+||+++|.+||.+.++...|.++.
T Consensus       575 VWMFgVCmWEIl~lGvkPfqgv-kNsDVI~~iEnG---eRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  575 VWMFGVCMWEILSLGVKPFQGV-KNSDVIGHIENG---ERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             HHHHHHHHHHHHHhcCCccccc-cccceEEEecCC---CCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence            9999999999875 55666543 333344443333   345666789999999999999999999999999999998876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       651 q  651 (974)
T KOG4257|consen  651 Q  651 (974)
T ss_pred             H
Confidence            4

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=1.5e-29  Score=178.17  Aligned_cols=146  Identities=20%  Similarity=0.237  Sum_probs=109.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++++|||++.........   ....++..|+|||.+.+..++.++|
T Consensus       110 ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~---~~~~g~~~~~aPE~~~~~~~~~~~D  183 (285)
T cd05632         110 EILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESI---RGRVGTVGYMAPEVLNNQRYTLSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcc---cCCCCCcCccChHHhcCCCCCcccc
Confidence            7899999999   899999999999999999999999999998665433221   1335888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||+|+++++++++..|+....... ........-...........+..+.+++..||+.+|++||+     +.+++.
T Consensus       184 i~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         184 YWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            9999999999999988875432211 11111110000011122335567899999999999999999     666665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.96  E-value=2.5e-29  Score=174.26  Aligned_cols=144  Identities=20%  Similarity=0.316  Sum_probs=113.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||++||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       110 ~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  184 (257)
T cd08223         110 QIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMA--STLIGTPYYMSPELFSNKPYNYKSD  184 (257)
T ss_pred             HHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEecccCCcc--ccccCCcCccChhHhcCCCCCchhh
Confidence            6889999999   8999999999999999999999999999987664332211  1335778899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+... ...........+..   .......+..+.+++.+||+.+|++|||+.++++
T Consensus       185 v~slG~il~~l~~g~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         185 VWALGCCVYEMATLKHAFNAK-DMNSLVYRIIEGKL---PPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             hHHHHHHHHHHHcCCCCCCCC-CHHHHHHHHHhcCC---CCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            999999999999998876533 23333333222221   1122346678999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.96  E-value=1.3e-29  Score=177.39  Aligned_cols=150  Identities=18%  Similarity=0.238  Sum_probs=111.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++......... ......++..|++||.+.+..++.++|
T Consensus       125 ~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~D  200 (275)
T cd05046         125 QIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYY-KLRNALIPLRWLAPEAVQEDDFSTKSD  200 (275)
T ss_pred             HHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEcccccccccCccccc-ccCCceeEEeecChhhhccCCCCchhh
Confidence            7899999999   899999999999999999999999999998644322211 111234566799999998888889999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      +||+|+++++++++...++........+........  ........+..+.+++.+||+.+|++|||+.++++.|.
T Consensus       201 i~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         201 VWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL--ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc--CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            999999999999854433333222333332222221  11122345678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=1.1e-29  Score=168.10  Aligned_cols=141  Identities=17%  Similarity=0.259  Sum_probs=121.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |+|.||.|+|   .+++|||||||+|+|++..+.+|++|||-+...+.+...    +.-||.-|++||...+...+...|
T Consensus       132 q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~----tlcgt~dyl~pEmv~~~~hd~~Vd  204 (281)
T KOG0580|consen  132 QLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRK----TLCGTLDYLPPEMVEGRGHDKFVD  204 (281)
T ss_pred             HHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCce----eeecccccCCHhhcCCCCccchhh
Confidence            7899999999   999999999999999999999999999998777644433    335899999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|++|++.++++.|..||.... .++.+..+...+...+    ...+..+.++|.+|+.++|.+|.+..++++
T Consensus       205 ~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~~p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  205 LWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLKFP----STISGGAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             HHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHccccCC----cccChhHHHHHHHHhccCccccccHHHHhh
Confidence            9999999999999988876444 7777777777665443    456678999999999999999999998876

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.96  E-value=1.1e-29  Score=179.50  Aligned_cols=147  Identities=17%  Similarity=0.252  Sum_probs=112.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||.||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       126 qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  200 (292)
T cd06658         126 SVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR--KSLVGTPYWMAPEVISRLPYGTEVD  200 (292)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC--ceeecCccccCHHHHccCCCCchhh
Confidence            7899999999   8999999999999999999999999999986554322211  1235788999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++++++++..|+........ +.... .............+..+.+++.+||..+|++|||+.++++.
T Consensus       201 v~slGvil~el~~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         201 IWSLGIMVIEMIDGEPPYFNEPPLQA-MRRIR-DNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHH-hcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            99999999999999888764433221 11111 11111112222356689999999999999999999999873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.96  E-value=1.9e-29  Score=177.48  Aligned_cols=147  Identities=20%  Similarity=0.312  Sum_probs=110.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      |++.||.|||   +.+++|+|+||+||+++.++.++++|||++..........  ....++..|+|||.+..     ..+
T Consensus       132 ~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  206 (286)
T cd06638         132 EALMGLQHLH---VNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR--NTSVGTPFWMAPEVIACEQQLDSTY  206 (286)
T ss_pred             HHHHHHHHHH---hCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCcc--ccccCCCcccChhhhchhhhccccc
Confidence            6889999999   8999999999999999999999999999987664432221  13358889999998753     347


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +.++|+||+|+++++++++..|+............ .... ..........+..+.+++.+||+.+|++|||+.++++.
T Consensus       207 ~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         207 DARCDVWSLGITAIELGDGDPPLADLHPMRALFKI-PRNP-PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             cchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhc-cccC-CCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            88999999999999999998887654433322211 1110 01111112235679999999999999999999999874

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=1.5e-29  Score=177.76  Aligned_cols=145  Identities=19%  Similarity=0.298  Sum_probs=110.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |++.||+|||   +.+++|+|++|+||+++.++.++++|||++.........  .....++..|+|||.+.     +..+
T Consensus       129 qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~l~~~~~~~~~~  203 (282)
T cd06636         129 EILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATY  203 (282)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccC--CCcccccccccCHhhcCcccCcCcCC
Confidence            7899999999   899999999999999999999999999998755432211  12345788999999876     2457


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+............ ...  ..........+..+.+++.+||+.+|.+|||+.++++
T Consensus       204 ~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         204 DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLI-PRN--PPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             CcccchhHHHHHHHHHHhCCCCccccCHHhhhhhH-hhC--CCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            88999999999999999998887544333322211 111  1111122245678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=1.3e-29  Score=178.53  Aligned_cols=144  Identities=22%  Similarity=0.318  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++..........   ...++..|+|||.+.+..++.++|
T Consensus       110 qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~---~~~g~~~y~aPE~~~~~~~~~~~D  183 (285)
T cd05630         110 EICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK---GRVGTVGYMAPEVVKNERYTFSPD  183 (285)
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcccc---CCCCCccccChHHHcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999986654332221   235888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccch--hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTF--DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||+|++++++++|..|+......  .+........ .  ........+..+.+++.+||+.+|++|||     +.++++
T Consensus       184 iwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE-V--QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             cHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh-h--hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            999999999999998887643211  1111111110 0  01112235567999999999999999999     788876

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.96  E-value=3.5e-29  Score=176.75  Aligned_cols=146  Identities=22%  Similarity=0.288  Sum_probs=108.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      |++.||+|||   +.+++|+|+||+||+++.++.++|+|||++.........  .....++..|++||.+.+     ..+
T Consensus       118 ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  192 (292)
T cd06644         118 QMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR--RDSFIGTPYWMAPEVVMCETMKDTPY  192 (292)
T ss_pred             HHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc--cceecCCccccCceeeccccccCCCC
Confidence            7899999999   899999999999999999999999999988654332211  113357788999998853     346


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++|+++++..|+....... ......... .+........+..+.+++.+||..+|++||+++++++
T Consensus       193 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         193 DYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSE-PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             CchhhhHhHHHHHHHHhcCCCCCccccHHH-HHHHHhcCC-CccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            789999999999999999987765433222 222111111 1111122245568999999999999999999999976

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.96  E-value=1.4e-29  Score=179.25  Aligned_cols=146  Identities=19%  Similarity=0.305  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|++||.+.+..++.++|
T Consensus       123 ~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  197 (297)
T cd06656         123 ECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  197 (297)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCc--CcccCCccccCHHHHcCCCCCcHHH
Confidence            6889999999   8999999999999999999999999999987654433221  1235778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.................  .........+..+.+++.+||..+|++||++.++++
T Consensus       198 i~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         198 IWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT--PELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCC--CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999888765444333222111111  111223345577899999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.96  E-value=2.9e-29  Score=174.66  Aligned_cols=149  Identities=22%  Similarity=0.378  Sum_probs=113.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCccccccC-CCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG-DYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~-~~~~   78 (163)
                      |++.||+|||   +.+++|+|++|+||+++.++.++++|||++..........  ......++..|++||.+... .++.
T Consensus       110 ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~  186 (267)
T cd06610         110 EVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDF  186 (267)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCc
Confidence            7899999999   8999999999999999999999999999987665443321  12234578889999998876 6888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhc-ccch-hhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC-IQSS-EKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|++++++++|..|+....... .+......... .... .....+..+.+++.+||..+|++|||+.++++
T Consensus       187 ~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         187 KADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             ccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            9999999999999999988875443322 22222222111 1111 11245678999999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.96  E-value=3.1e-29  Score=176.07  Aligned_cols=145  Identities=23%  Similarity=0.368  Sum_probs=108.4

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc----CCC
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~----~~~   76 (163)
                      |++.||+|||   ++ +++|+||||+||+++.++.++++|||++.........   ....++..|+|||.+.+    ..+
T Consensus       111 qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~  184 (283)
T cd06617         111 SIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAK---TIDAGCKPYMAPERINPELNQKGY  184 (283)
T ss_pred             HHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc---ccccCCccccChhhcCCccccccc
Confidence            7899999999   76 9999999999999999999999999998765432211   12357778999998865    346


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+.......+.+....... ... ......+..+.+++.+||..+|++||++.++++
T Consensus       185 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         185 DVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP-SPQ-LPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             CccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC-CCC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            8899999999999999999888653222111111111111 111 111235678999999999999999999999986

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.96  E-value=3.4e-29  Score=184.79  Aligned_cols=96  Identities=21%  Similarity=0.189  Sum_probs=81.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC--CCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||.+||   ..+|||+||||+|||+...  ..+||+|||.+.+......     +..=+..|+|||++.+.+|+.+
T Consensus       297 Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~  368 (586)
T KOG0667|consen  297 QILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVY-----TYIQSRFYRAPEVILGLPYDTA  368 (586)
T ss_pred             HHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEecccccccCCcce-----eeeeccccccchhhccCCCCCc
Confidence            8999999999   9999999999999999543  3689999999987765544     2345678999999999999999


Q ss_pred             cceeecchhhHHHhhhccccccccch
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTF  105 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~  105 (163)
                      .|+||||||++||.+|...|..+...
T Consensus       369 IDmWSLGCIlAEL~tG~PLfpG~ne~  394 (586)
T KOG0667|consen  369 IDMWSLGCILAELFTGEPLFPGDNEY  394 (586)
T ss_pred             cceeehhhhHHhHhcCccccCCCCHH
Confidence            99999999999999996665554433

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=1.8e-29  Score=179.63  Aligned_cols=147  Identities=16%  Similarity=0.208  Sum_probs=108.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+ ..++.++
T Consensus       112 qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  186 (309)
T cd07872         112 QILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTY--SNEVVTLWYRPPDVLLGSSEYSTQI  186 (309)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccc--ccccccccccCCHHHhCCCCCCcHH
Confidence            7899999999   8999999999999999999999999999986543322211  12356789999998865 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh-------------------hhhccc-------chhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-------------------EELCIQ-------SSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~-------~~~~~~~~~~~~~l  134 (163)
                      |+||+|++++++++|..||......+ .+.....                   ......       .......+.++.++
T Consensus       187 DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  265 (309)
T cd07872         187 DMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIEL  265 (309)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHH
Confidence            99999999999999987775433211 1111000                   000000       00111245678999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||..||.+|||+.++++
T Consensus       266 i~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         266 LTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             HHHhccCChhhCCCHHHHhc
Confidence            99999999999999999987

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=3.6e-29  Score=174.43  Aligned_cols=146  Identities=21%  Similarity=0.310  Sum_probs=112.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc----cccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI----KDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||.++.........    ......++..|+|||.+.+..++
T Consensus       114 ~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~  190 (267)
T cd06628         114 QILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYT  190 (267)
T ss_pred             HHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCC
Confidence            7899999999   8999999999999999999999999999987665322111    11123477889999999888889


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++|+||+|+++++++++..|+............ ...   .........+..+.+++.+||+.+|.+||++.++++
T Consensus       191 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         191 RKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKI-GEN---ASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             chhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHH-hcc---CCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            9999999999999999998887644333322211 111   111122345678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.96  E-value=3.3e-29  Score=174.69  Aligned_cols=146  Identities=20%  Similarity=0.260  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+|++|+||+++.++.++++|||++......... .......++..|+|||.+.+..++.++
T Consensus       114 qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (266)
T cd06651         114 QILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKA  190 (266)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchh
Confidence            7899999999   899999999999999999999999999998765432111 111223577889999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|++++++++|..|+................   ............+.+++ .||..+|++||++++++.
T Consensus       191 Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         191 DVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP---TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             hhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC---CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            99999999999999988775443333222211111   11111233456778888 677789999999999975

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.96  E-value=1.7e-29  Score=178.86  Aligned_cols=146  Identities=17%  Similarity=0.258  Sum_probs=112.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       125 qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  199 (297)
T cd06659         125 SVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KSLVGTPYWMAPEVISRTPYGTEVD  199 (297)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccc--cceecCccccCHHHHccCCCCchhh
Confidence            7899999999   8999999999999999999999999999986554332211  1235788999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+........ +....... ..........+..+.+++.+||+.+|++||++.++++
T Consensus       200 v~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         200 IWSLGIMVIEMVDGEPPYFSDSPVQA-MKRLRDSP-PPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHhccC-CCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            99999999999999888765443322 11111111 1111122234567899999999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.96  E-value=2.4e-29  Score=196.10  Aligned_cols=155  Identities=14%  Similarity=0.142  Sum_probs=115.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC----------------cccccCccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET----------------HIKDAIPIGIMGF   65 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~----------------~~~~~~~~~~~~~   65 (163)
                      ||+.||+|||   +.+++||||||+||+++.++.++++|||++........                ........||+.|
T Consensus       121 QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~Y  197 (932)
T PRK13184        121 KICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDY  197 (932)
T ss_pred             HHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCC
Confidence            7899999999   89999999999999999999999999999976521110                0011124589999


Q ss_pred             cCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCC
Q 043958           66 VATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAED  145 (163)
Q Consensus        66 ~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  145 (163)
                      +|||.+.+..++.++|+||+||+++++++|..|+...... +.......... .........+..+.+++.+|++.||++
T Consensus       198 mAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~-ki~~~~~i~~P-~~~~p~~~iP~~L~~LI~rcL~~DP~k  275 (932)
T PRK13184        198 MAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR-KISYRDVILSP-IEVAPYREIPPFLSQIAMKALAVDPAE  275 (932)
T ss_pred             CCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-hhhhhhhccCh-hhccccccCCHHHHHHHHHHccCChhh
Confidence            9999999888999999999999999999999887543222 12111111110 111112345677999999999999999


Q ss_pred             CC-CHHHHHHHHHHHhh
Q 043958          146 RP-TMIDVAKQLRQAYR  161 (163)
Q Consensus       146 Rp-t~~~i~~~L~~~~~  161 (163)
                      |+ +++++.+.|+...+
T Consensus       276 R~ss~eeLl~~Le~~lq  292 (932)
T PRK13184        276 RYSSVQELKQDLEPHLQ  292 (932)
T ss_pred             CcCHHHHHHHHHHHHHh
Confidence            96 57777778877643

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.96  E-value=3.6e-29  Score=181.03  Aligned_cols=146  Identities=18%  Similarity=0.204  Sum_probs=109.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........   .....++..|+|||.+.+..++.++|
T Consensus       126 ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (353)
T cd07850         126 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVD  199 (353)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC---CCCCcccccccCHHHHhCCCCCCchh
Confidence            7899999999   89999999999999999999999999999976544322   11235778899999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhh----------------------hhhhcc-----------------cch
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVI----------------------REELCI-----------------QSS  122 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~-----------------~~~  122 (163)
                      +||+|+++++++++..|+...+.... ...+.                      ......                 ...
T Consensus       200 vwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (353)
T cd07850         200 IWSVGCIMGEMIRGTVLFPGTDHIDQ-WNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSES  278 (353)
T ss_pred             hHhHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccc
Confidence            99999999999999877654332111 00000                      000000                 000


Q ss_pred             hhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          123 EKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       123 ~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .....+..+.+++.+||+.||++|||+.+++.
T Consensus       279 ~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         279 HNKLKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             ccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            01134567899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=1.6e-29  Score=183.29  Aligned_cols=148  Identities=18%  Similarity=0.216  Sum_probs=107.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc----------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH----------------------------   53 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------------------------   53 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++.........                            
T Consensus       109 qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (360)
T cd05627         109 ETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETW  185 (360)
T ss_pred             HHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccc
Confidence            7899999999   999999999999999999999999999998654321100                            


Q ss_pred             -----ccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHH
Q 043958           54 -----IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQV  128 (163)
Q Consensus        54 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (163)
                           .......||+.|+|||.+.+..++.++|+||+||+++++++|..||.... ..+....+.........+.....+
T Consensus       186 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~s  264 (360)
T cd05627         186 KKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSET-PQETYRKVMNWKETLVFPPEVPIS  264 (360)
T ss_pred             cccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCC-HHHHHHHHHcCCCceecCCCCCCC
Confidence                 00113468899999999998889999999999999999999988875433 333333332211111112222345


Q ss_pred             HHHHHHHHhccccCcCCCCC---HHHHHH
Q 043958          129 QAFVELAVKCVSESAEDRPT---MIDVAK  154 (163)
Q Consensus       129 ~~~~~li~~cl~~~p~~Rpt---~~~i~~  154 (163)
                      ..+++++.+++. +|.+|++   +.++++
T Consensus       265 ~~~~~li~~l~~-~p~~R~~~~~~~ei~~  292 (360)
T cd05627         265 EKAKDLILRFCT-DSENRIGSNGVEEIKS  292 (360)
T ss_pred             HHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence            678899988774 9999985   555554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.96  E-value=2.9e-29  Score=177.53  Aligned_cols=146  Identities=23%  Similarity=0.376  Sum_probs=109.5

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC----C
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----Y   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~----~   76 (163)
                      |++.||+|||   + .+++|+||+|+||+++.++.++|+|||++..........   ...++..|+|||.+.+..    +
T Consensus       122 ~i~~~l~~lH---~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  195 (296)
T cd06618         122 AIVKALHYLK---EKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKT---RSAGCAAYMAPERIDPPDPNPKY  195 (296)
T ss_pred             HHHHHHHHHH---hhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCccc---CCCCCccccCHhhcCCCCCcccc
Confidence            7899999999   6 599999999999999999999999999987654332221   224677899999987553    7


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+.......+.......... ...+.....+.++.+++.+||..+|++||++++++.
T Consensus       196 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         196 DIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP-PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             ccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            88999999999999999998887543222222222222211 111111235678999999999999999999999976

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=3.4e-29  Score=179.85  Aligned_cols=149  Identities=17%  Similarity=0.249  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++........... ....|++.|+|||++.     ...+
T Consensus       110 qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~  185 (332)
T cd05623         110 EMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS-SVAVGTPDYISPEILQAMEDGKGKY  185 (332)
T ss_pred             HHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee-cccccCccccCHHHHhccccCCCCC
Confidence            7899999999   89999999999999999999999999999865543322211 1346899999999886     2457


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccch-hhHHHHHHHHHHHHhccccCcCC--CCCHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS-EKDKQVQAFVELAVKCVSESAED--RPTMIDVA  153 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~--Rpt~~~i~  153 (163)
                      +.++|+||+|+++|++++|..||.... ..+....+.........+ .....+..+.+++.+|+..++.+  |+++.+++
T Consensus       186 ~~~~DvwSlGvil~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~  264 (332)
T cd05623         186 GPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFK  264 (332)
T ss_pred             CCcCCEEeeHHHHHHHhcCCCCCCCCC-HHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHh
Confidence            889999999999999999988876433 223333332222111111 12245678999999988665544  67888887


Q ss_pred             HH
Q 043958          154 KQ  155 (163)
Q Consensus       154 ~~  155 (163)
                      +.
T Consensus       265 ~h  266 (332)
T cd05623         265 QH  266 (332)
T ss_pred             CC
Confidence            64

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.8e-29  Score=175.03  Aligned_cols=145  Identities=21%  Similarity=0.352  Sum_probs=112.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|++||.+.+..++.++|
T Consensus       106 ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~sD  180 (274)
T cd06609         106 EVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKR--NTFVGTPFWMAPEVIKQSGYDEKAD  180 (274)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeeccccccc--ccccCCccccChhhhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997775443211  1335777899999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+...... ..........  .........+..+.+++.+||..+|++|||++++++
T Consensus       181 v~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         181 IWSLGITAIELAKGEPPLSDLHPM-RVLFLIPKNN--PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHHHHHHHhCCCCcccCchH-HHHHHhhhcC--CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            999999999999988876543322 2222111111  111111125678999999999999999999999976

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.96  E-value=4.4e-29  Score=176.11  Aligned_cols=146  Identities=18%  Similarity=0.311  Sum_probs=109.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-----CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-----DY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-----~~   76 (163)
                      |++.||+|||   ..+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+...     .+
T Consensus       136 qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  210 (291)
T cd06639         136 GALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRR--NTSVGTPFWMAPEVIACEQQYDYSY  210 (291)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccc--cCccCCccccChhhhcCCCCccccc
Confidence            7889999999   8999999999999999999999999999987654332211  123577889999987643     26


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+........+.. ..... .............+.+++.+||+.+|++||++.++++
T Consensus       211 ~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         211 DARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK-IPRNP-PPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             CCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH-HhcCC-CCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            7899999999999999999887764433332221 11111 1111112234567999999999999999999999876

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.96  E-value=1.8e-29  Score=177.46  Aligned_cols=148  Identities=16%  Similarity=0.158  Sum_probs=107.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++|+|||++.........  .....++..|+|||.+.+. .++.++
T Consensus       109 qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  183 (285)
T cd07861         109 QILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV--YTHEVVTLWYRAPEVLLGSPRYSTPV  183 (285)
T ss_pred             HHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCccc--ccCCcccccccChHHhcCCCCcCcHH
Confidence            7899999999   899999999999999999999999999998655332211  1123567889999988654 478899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh---------------hhhcc---------cchhhHHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR---------------EELCI---------QSSEKDKQVQAFVELAV  136 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~---------~~~~~~~~~~~~~~li~  136 (163)
                      |+||+|+++++++++..|+...............               ..+..         ........++++.+++.
T Consensus       184 Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  263 (285)
T cd07861         184 DIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLE  263 (285)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHH
Confidence            9999999999999998776543322211110000               00000         00001124577889999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||..||++|||+.+++.
T Consensus       264 ~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         264 KMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHhcCChhhCCCHHHHhc
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.96  E-value=1.9e-29  Score=175.52  Aligned_cols=144  Identities=21%  Similarity=0.334  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   + .+++|+||+|+||+++.++.++++|||.+..........    ..++..|++||.+.+..++.++
T Consensus       108 ~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~----~~~~~~y~~PE~~~~~~~~~~~  180 (265)
T cd06605         108 AVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKT----FVGTSSYMAPERIQGNDYSVKS  180 (265)
T ss_pred             HHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhc----ccCChhccCHHHHcCCCCCchh
Confidence            6889999999   7 999999999999999999999999999986553322211    3577789999999888899999


Q ss_pred             ceeecchhhHHHhhhcccccccc----chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECN----TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+....    ...+.......... +.. .....+..+.+++.+||..+|++|||+.+++.
T Consensus       181 Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         181 DIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP-PRL-PSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             hHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC-CCC-ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            99999999999999988876442    22222222222211 111 11126678999999999999999999999886

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=3.8e-29  Score=174.55  Aligned_cols=148  Identities=21%  Similarity=0.339  Sum_probs=114.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||+  ..+++|+||+|.||+++.++.++++|||.+........   .....++..|++||.+.+..++.++|
T Consensus       121 ~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~Pe~~~~~~~~~~~D  195 (269)
T cd08528         121 QMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESK---LTSVVGTILYSCPEIVKNEPYGEKAD  195 (269)
T ss_pred             HHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecccceeecccccc---cccccCcccCcChhhhcCCCCchHHH
Confidence            78999999993  26799999999999999999999999999976654431   12335788899999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      +||+|+++|+++++..|+.... ..............+  ......+..+.+++.+||+.||++||++.++.+.++
T Consensus       196 v~slG~ll~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         196 VWAFGCILYQMCTLQPPFYSTN-MLSLATKIVEAVYEP--LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHHHHhCCCcccccC-HHHHHHHHhhccCCc--CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            9999999999999977764332 222222222222111  111234578999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=4.4e-29  Score=174.36  Aligned_cols=146  Identities=21%  Similarity=0.333  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+..     ..+
T Consensus       121 ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  195 (275)
T cd06608         121 ETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRR--NTFIGTPYWMAPEVIACDEQPDASY  195 (275)
T ss_pred             HHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhh--cCccccccccCHhHhcccccccCCc
Confidence            7899999999   8999999999999999999999999999987654332221  23457889999998753     246


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+.......... ...... ..........+..+.+++.+||..||++|||+.++++
T Consensus       196 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         196 DARSDVWSLGITAIELADGKPPLCDMHPMRALF-KIPRNP-PPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             cccccHHHhHHHHHHHHhCCCCccccchHHHHH-HhhccC-CCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            778999999999999999988875433222222 222211 1122223345678999999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.95  E-value=2.3e-30  Score=177.21  Aligned_cols=146  Identities=21%  Similarity=0.295  Sum_probs=122.6

Q ss_pred             HHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccce
Q 043958            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDV   82 (163)
Q Consensus         3 i~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv   82 (163)
                      .++||+|||   ...-+|||||+.|||++.+|..|++|||++...++...+..  +..||+.|||||.+..-.|+.++||
T Consensus       138 TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRN--TVIGTPFWMAPEVI~EIGY~~~ADI  212 (502)
T KOG0574|consen  138 TLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRN--TVIGTPFWMAPEVIEEIGYDTKADI  212 (502)
T ss_pred             HHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhC--ccccCcccccHHHHHHhccchhhhH
Confidence            468999999   88899999999999999999999999999987766554443  5689999999999998899999999


Q ss_pred             eecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           83 FSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        83 ~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      ||+|++..|+..|..||..-++...++..-.  ++++-+..+...+.++-+++++||.+.|++|.|+.++++.
T Consensus       213 WSLGITaIEMAEG~PPYsDIHPMRAIFMIPT--~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  213 WSLGITAIEMAEGRPPYSDIHPMRAIFMIPT--KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             hhhcchhhhhhcCCCCcccccccceeEeccC--CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            9999999999999998876666555544322  2334445566788999999999999999999999888764

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.95  E-value=8.3e-29  Score=172.80  Aligned_cols=146  Identities=19%  Similarity=0.295  Sum_probs=108.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCcccccCccccccccCccccccCC--CCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~   78 (163)
                      |++.||+|||   ..+++|+||||+||+++. ++.++++|||++..........  ....++..|+|||.+....  ++.
T Consensus       116 qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~  190 (268)
T cd06624         116 QILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEVIDKGPRGYGA  190 (268)
T ss_pred             HHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCcc--ccCCCCccccChhhhccccccCCc
Confidence            7899999999   899999999999999976 6789999999987654322211  1234778999999986643  788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+.................  .........+..+.+++.+||+.+|++|||+.+++.
T Consensus       191 ~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         191 PADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK--IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhc--cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            99999999999999999887654322221111111101  111122345678999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.95  E-value=7.5e-29  Score=173.30  Aligned_cols=150  Identities=17%  Similarity=0.290  Sum_probs=111.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC--CCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~   79 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++................++..|++||.+....  ++.+
T Consensus       116 qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~  192 (272)
T cd06629         116 QVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAK  192 (272)
T ss_pred             HHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCcc
Confidence            7899999999   8999999999999999999999999999987654332222222345778899999887654  7889


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhh-hhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+|+++++++++..|+..........+..... ............+..+.+++.+||..+|+.|||+.++++
T Consensus       193 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         193 VDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             chhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            999999999999999988765433332222211111 101111112235678999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.95  E-value=7.4e-29  Score=171.86  Aligned_cols=145  Identities=19%  Similarity=0.268  Sum_probs=114.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++.........  .....++..|+|||.+.+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~--~~~~~~~~~y~ape~~~~~~~~~~~D  183 (256)
T cd08221         109 QIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM--AETVVGTPYYMSPELCQGVKYNFKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccccc--ccccCCCccccCHhhcCCCCCCCcch
Confidence            6889999999   899999999999999999999999999998766544321  12345788999999998888889999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++++++++..++.. ....+............   .....+..+.+++.+||..+|++||++.++++.
T Consensus       184 v~slG~i~~~l~~g~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         184 IWALGCVLYELLTLKRTFDA-TNPLNLVVKIVQGNYTP---VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             hHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHcCCCCC---CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            99999999999999877643 33333443333333221   123456789999999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.95  E-value=5.3e-29  Score=175.38  Aligned_cols=146  Identities=16%  Similarity=0.227  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||+|+||+++.++.++++|||.+..........  ....++..|++||.+.+..++.++|
T Consensus       123 ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  197 (285)
T cd06648         123 AVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPEVISRLPYGTEVD  197 (285)
T ss_pred             HHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCccc--ccccCCccccCHHHhcCCCCCCccc
Confidence            6889999999   8999999999999999999999999999876544322111  1235788999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+...... .......... ..........+..+.+++.+||+.+|++|||+.++++
T Consensus       198 v~slGv~l~ell~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         198 IWSLGIMVIEMVDGEPPYFNEPPL-QAMKRIRDNL-PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHHhcC-CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            999999999999998887654332 2222222111 1111112235578999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=7e-29  Score=178.19  Aligned_cols=149  Identities=17%  Similarity=0.263  Sum_probs=106.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      ||+.||+|||   +++++||||||+||+++.++.++|+|||++........... ....|++.|+|||.+..     +.+
T Consensus       110 qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~  185 (331)
T cd05597         110 EMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS-NVAVGTPDYISPEILQAMEDGKGRY  185 (331)
T ss_pred             HHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc-cceeccccccCHHHHhhccccccCC
Confidence            7899999999   89999999999999999999999999999876544332221 12358899999999863     347


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhccc-chhhHHHHHHHHHHHHhccccCcC--CCCCHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ-SSEKDKQVQAFVELAVKCVSESAE--DRPTMIDVA  153 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~--~Rpt~~~i~  153 (163)
                      +.++|+||+|+++|++++|..|+.... ..+....+........ .......+..+++++.+|+..++.  .|+++.+++
T Consensus       186 ~~~~DiwslG~~l~el~~g~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l  264 (331)
T cd05597         186 GPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFK  264 (331)
T ss_pred             CCcceeehhhhHHHHHhhCCCCCCCCC-HHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHh
Confidence            789999999999999999988875432 2222222222111111 111123567889999997765443  378888887


Q ss_pred             HH
Q 043958          154 KQ  155 (163)
Q Consensus       154 ~~  155 (163)
                      ..
T Consensus       265 ~h  266 (331)
T cd05597         265 DH  266 (331)
T ss_pred             cC
Confidence            63

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.95  E-value=1.8e-28  Score=174.36  Aligned_cols=141  Identities=23%  Similarity=0.371  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++.......      ...++..|+|||.+.   .+.++.
T Consensus       123 ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  193 (307)
T cd06607         123 GALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN------SFVGTPYWMAPEVILAMDEGQYDG  193 (307)
T ss_pred             HHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC------CccCCccccCceeeeccCCCCCCc
Confidence            7899999999   8999999999999999999999999999986554332      234677899999874   355888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++|++++|..|+........... .....  .........+..+.+++.+||..+|++||++.+++.
T Consensus       194 ~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         194 KVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQND--SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             ccchHHHHHHHHHHHcCCCCCCCccHHHHHHH-HhcCC--CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            99999999999999999888764433222211 11111  111112245678999999999999999999999986

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=4.1e-29  Score=186.23  Aligned_cols=149  Identities=16%  Similarity=0.251  Sum_probs=124.9

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccC-ccccccccCccccccCCCCcc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAI-PIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      +|||.|+.||.   .+++||||+-+.|+++-..-.+||+|||+.+-...+........ ..-...|.|||.+..+.|+.+
T Consensus       219 ~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFSha  295 (1039)
T KOG0199|consen  219 MQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHA  295 (1039)
T ss_pred             HHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcccccccc
Confidence            48999999999   99999999999999999999999999999988877665543322 234457999999999999999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +|+|++|+++|||++++..++..-....++..+..+   .+.+....|++.+.++++.||..+|++||||..|.+.
T Consensus       296 SDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~---erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  296 SDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG---ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             chhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc---ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            999999999999999888877666666666665533   2344455688999999999999999999999999753

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.95  E-value=7.5e-29  Score=178.02  Aligned_cols=148  Identities=18%  Similarity=0.258  Sum_probs=108.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      |++.||+|||   +++++||||||+||+++.++.++|+|||++........... ....|++.|+|||.+.+     +.+
T Consensus       110 qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~  185 (331)
T cd05624         110 EMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS-SVAVGTPDYISPEILQAMEDGMGKY  185 (331)
T ss_pred             HHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee-ccccCCcccCCHHHHhccccCCCCC
Confidence            7899999999   89999999999999999999999999999876654332221 13468899999998875     457


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccc-hhhHHHHHHHHHHHHhccccCcCC--CCCHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS-SEKDKQVQAFVELAVKCVSESAED--RPTMIDVA  153 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~--Rpt~~~i~  153 (163)
                      +.++|+||+|+++|++++|..|+.... ..+....+......... ......+..+.+++.+|+...+.+  |+++++++
T Consensus       186 ~~~~DiwSlGvil~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~  264 (331)
T cd05624         186 GPECDWWSLGVCMYEMLYGETPFYAES-LVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFK  264 (331)
T ss_pred             CCcccEEeeehhhhhhhhCCCCccCCC-HHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHh
Confidence            889999999999999999988876433 22223222222111111 112234678999999999866544  45777776


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      +
T Consensus       265 ~  265 (331)
T cd05624         265 K  265 (331)
T ss_pred             c
Confidence            5

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=1.8e-28  Score=171.89  Aligned_cols=140  Identities=19%  Similarity=0.238  Sum_probs=101.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-------CeEECccccccccCCCCCcccccCccccccccCcccccc-
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-------VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-------~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-   73 (163)
                      |++.||+|||   +++++||||||+||+++..+       .++++|||++.......      ...++..|+|||.+.+ 
T Consensus       125 qi~~~l~~lH---~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~------~~~~~~~~~aPe~~~~~  195 (274)
T cd05076         125 QLASALSYLE---DKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSRE------ERVERIPWIAPECVPGG  195 (274)
T ss_pred             HHHHHHHHHH---cCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccccc------ccccCCcccCchhhcCC
Confidence            7899999999   89999999999999997654       37999999875432221      1246678999998875 


Q ss_pred             CCCCcccceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                      ..++.++|+||||+++|+++. +..|+. .....+... .........    ......+.+++.+||+.+|++|||+.++
T Consensus       196 ~~~~~~~Dv~slG~~l~el~~~g~~p~~-~~~~~~~~~-~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~i  269 (274)
T cd05076         196 NSLSTAADKWSFGTTLLEICFDGEVPLK-ERTPSEKER-FYEKKHRLP----EPSCKELATLISQCLTYEPTQRPSFRTI  269 (274)
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCCCCcc-ccChHHHHH-HHHhccCCC----CCCChHHHHHHHHHcccChhhCcCHHHH
Confidence            457899999999999999864 555443 222222111 111111111    1123578999999999999999999999


Q ss_pred             HHHH
Q 043958          153 AKQL  156 (163)
Q Consensus       153 ~~~L  156 (163)
                      ++.|
T Consensus       270 l~~L  273 (274)
T cd05076         270 LRDL  273 (274)
T ss_pred             HHhh
Confidence            9876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.95  E-value=6.5e-29  Score=176.44  Aligned_cols=152  Identities=19%  Similarity=0.181  Sum_probs=112.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-------------ccccCccccccccCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-------------IKDAIPIGIMGFVAT   68 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~~~~P   68 (163)
                      |++.||+|||   +.+++|+||||.||+++.++.++++|||+++........             .......++..|+||
T Consensus       109 ~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP  185 (305)
T cd05609         109 ETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAP  185 (305)
T ss_pred             HHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCc
Confidence            6889999999   899999999999999999999999999988632111000             011123467789999


Q ss_pred             cccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           69 EYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        69 E~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      |.+.+..++.++|+||+|+++++++++..|+... ...++...........+.. ....+..+.+++.+||+.+|++||+
T Consensus       186 E~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~~  263 (305)
T cd05609         186 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGD-TPEELFGQVISDDIEWPEG-DEALPADAQDLISRLLRQNPLERLG  263 (305)
T ss_pred             hhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcccCCCCc-cccCCHHHHHHHHHHhccChhhccC
Confidence            9998888999999999999999999998887633 3344444333332111111 1145678999999999999999999


Q ss_pred             HHHHHHHHHH
Q 043958          149 MIDVAKQLRQ  158 (163)
Q Consensus       149 ~~~i~~~L~~  158 (163)
                      +.++.+.|+.
T Consensus       264 ~~~~~~ll~~  273 (305)
T cd05609         264 TGGAFEVKQH  273 (305)
T ss_pred             ccCHHHHHhC
Confidence            7666666554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=2.3e-28  Score=174.15  Aligned_cols=150  Identities=18%  Similarity=0.276  Sum_probs=109.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-----ccccCccccccccCccccccC--
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTG--   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~--   74 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||.+.........     .......++..|+|||.+.+.  
T Consensus       109 ~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (314)
T cd08216         109 DVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQ  185 (314)
T ss_pred             HHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCC
Confidence            7899999999   899999999999999999999999999988655432211     111233466789999998753  


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhh-----------------------------hhhcccchhhH
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-----------------------------EELCIQSSEKD  125 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~  125 (163)
                      .++.++|+||+|+++++++++..|+...............                             ...........
T Consensus       186 ~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (314)
T cd08216         186 GYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTR  265 (314)
T ss_pred             CCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhh
Confidence            5788999999999999999988887643322211111000                             00001111223


Q ss_pred             HHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          126 KQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       126 ~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ..+.++.+++.+||..+|++|||+.++++
T Consensus       266 ~~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         266 TFSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             HHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            44578999999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=2.3e-28  Score=172.00  Aligned_cols=146  Identities=16%  Similarity=0.247  Sum_probs=108.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD------   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~------   75 (163)
                      |++.||.|||.  ..+++|+||||+||+++.++.++++|||++.........    ...++..|++||.+.+..      
T Consensus       110 ~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~~  183 (286)
T cd06622         110 AVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAK----TNIGCQSYMAPERIKSGGPNQNPT  183 (286)
T ss_pred             HHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccc----cCCCccCccCcchhcCCCCCccCC
Confidence            68899999993  259999999999999999999999999998665433221    234677899999886543      


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++|+||+|+++++++++..|+..... ......................+.++.+++.+||..+|++||++.+++.
T Consensus       184 ~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         184 YTVQSDVWSLGLSILEMALGRYPYPPETY-ANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCcch-hhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            47899999999999999999888753322 2222111111001111223346788999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.95  E-value=1.7e-28  Score=173.51  Aligned_cols=147  Identities=20%  Similarity=0.309  Sum_probs=113.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+|++|+||+++.++.++++|||++..........  ....++..|++||.+.+..++.++|
T Consensus       123 ~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~D  197 (293)
T cd06647         123 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  197 (293)
T ss_pred             HHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc--ccccCChhhcCchhhccCCCCchhh
Confidence            6889999999   8999999999999999999999999999886554332221  1235778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++|+++++..|+........+........  .........+..+.+++.+||..+|++||++++++..
T Consensus       198 v~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         198 IWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT--PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC--CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            99999999999999888764443332222111111  1122233456789999999999999999999999863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.95  E-value=2.1e-28  Score=171.54  Aligned_cols=144  Identities=22%  Similarity=0.342  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   .++++|+||+|+||+++.++.++++|||++.........  .....++..|++||.+.+..++.++|
T Consensus       109 ~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~D  183 (277)
T cd06642         109 EILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK--RNTFVGTPFWMAPEVIKQSAYDFKAD  183 (277)
T ss_pred             HHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcchh--hhcccCcccccCHHHhCcCCCchhhh
Confidence            6889999999   899999999999999999999999999998765433211  11235778899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+..... ...........   ........+..+.+++.+||+.+|++||++.++++
T Consensus       184 v~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         184 IWSLGITAIELAKGEPPNSDLHP-MRVLFLIPKNS---PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHHHhCCCCCcccch-hhHHhhhhcCC---CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            99999999999998877543222 11111111111   11112235678999999999999999999999997

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.95  E-value=1.7e-28  Score=193.10  Aligned_cols=144  Identities=13%  Similarity=0.109  Sum_probs=98.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-------------------CCeEECccccccccCCCCC--------c-
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-------------------HVAKLFDFSLAESIPDGET--------H-   53 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-------------------~~~~l~dfg~~~~~~~~~~--------~-   53 (163)
                      ||+.||+|||   +++|+||||||+|||++..                   +.+|++|||+++.......        . 
T Consensus        88 qi~~al~~lH---~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~  164 (793)
T PLN00181         88 QIVEIVNAAH---SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVK  164 (793)
T ss_pred             HHHHHHHHHH---hCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccc
Confidence            8999999999   8999999999999999654                   4456666666643211000        0 


Q ss_pred             -----ccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHH
Q 043958           54 -----IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQV  128 (163)
Q Consensus        54 -----~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (163)
                           .......+|+.|||||.+.+..++.++|||||||+++||+++..++....   ..........  . .+......
T Consensus       165 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~--~-~~~~~~~~  238 (793)
T PLN00181        165 KQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRV--L-PPQILLNW  238 (793)
T ss_pred             cCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhh--c-ChhhhhcC
Confidence                 00011357888999999998899999999999999999998655533211   1111111111  0 11111223


Q ss_pred             HHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          129 QAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       129 ~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ....+++.+||+.+|.+||++.++++
T Consensus       239 ~~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        239 PKEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHHHHHHHhCCCChhhCcChHHHhh
Confidence            45678899999999999999999976

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.95  E-value=8.3e-29  Score=172.47  Aligned_cols=148  Identities=18%  Similarity=0.282  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc----ccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH----IKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++.........    .......++..|+|||.+.+..++
T Consensus       110 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~  186 (265)
T cd06631         110 QILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYG  186 (265)
T ss_pred             HHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCc
Confidence            7899999999   899999999999999999999999999998765321111    111123578889999999888889


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++|+||+|+++++++++..|+.................  .........+..+.+++.+||..+|++||++.+++.
T Consensus       187 ~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         187 RKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRG--LMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             chhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccC--CCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999999888764433322211111101  111122235678999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.95  E-value=7.9e-29  Score=174.04  Aligned_cols=143  Identities=22%  Similarity=0.304  Sum_probs=108.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++........    ....++..|+|||.+.. ..++.++
T Consensus       105 qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  177 (279)
T cd05633         105 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGTAYDSSA  177 (279)
T ss_pred             HHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCc----cCcCCCcCccCHHHhcCCCCCCchh
Confidence            7899999999   89999999999999999999999999999865543221    12357889999998864 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchh-hccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFD-EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      |+||+|+++++++++..|+....... .....   .............+..+.+++.+||+.||++||     |+.++++
T Consensus       178 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         178 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDR---MTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             hhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHH---HhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            99999999999999988875332111 11111   111111122334567899999999999999999     5888776

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.95  E-value=2.4e-28  Score=169.83  Aligned_cols=149  Identities=21%  Similarity=0.269  Sum_probs=112.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc--ccCccccccccCccccccCC---C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK--DAIPIGIMGFVATEYVTTGD---Y   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~---~   76 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++...........  .....++..|++||.+.+..   +
T Consensus       107 ~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~  183 (264)
T cd06626         107 QLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGH  183 (264)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCC
Confidence            7899999999   89999999999999999999999999999876654332211  11235677899999998765   7


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+............... ......+.....+..+.+++.+||+.+|++|||+.+++.
T Consensus       184 ~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         184 GRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             CcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            88999999999999999998887543322222222111 111222223334678899999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.95  E-value=3.2e-28  Score=170.67  Aligned_cols=145  Identities=21%  Similarity=0.351  Sum_probs=112.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~apE~~~~~~~~~~~D  183 (277)
T cd06640         109 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPEVIQQSAYDSKAD  183 (277)
T ss_pred             HHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcccc--ccccCcccccCHhHhccCCCccHHH
Confidence            6889999999   8999999999999999999999999999987664432211  1235677899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++++++++..|+....+. ..........   ........+..+.+++.+||+.+|++||++.+++..
T Consensus       184 v~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         184 IWSLGITAIELAKGEPPNSDMHPM-RVLFLIPKNN---PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHHHHCCCCCCCcChH-hHhhhhhcCC---CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            999999999999998776533322 2222111111   112233567789999999999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=1.7e-28  Score=172.46  Aligned_cols=148  Identities=14%  Similarity=0.148  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|++||.+.+ ..++.++
T Consensus       108 ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  182 (286)
T cd07847         108 QTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY--TDYVATRWYRAPELLVGDTQYGPPV  182 (286)
T ss_pred             HHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc--cCcccccccCCHHHHhCCCCcCchh
Confidence            7899999999   8999999999999999999999999999997765433211  12346778999998876 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhh------h-------------hhhccc-------chhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVI------R-------------EELCIQ-------SSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~------~-------------~~~~~~-------~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..|+......+.......      .             ....+.       .......+..+.++
T Consensus       183 Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  262 (286)
T cd07847         183 DVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSF  262 (286)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHH
Confidence            999999999999999877654333222111000      0             000000       00112345778999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.+|++|||+.+++.
T Consensus       263 i~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         263 LKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHHHhcCCccccCCHHHHhc
Confidence            99999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=8.6e-29  Score=171.97  Aligned_cols=144  Identities=19%  Similarity=0.190  Sum_probs=109.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++......      ....++..|++||.+.+..++.++|
T Consensus       105 qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~D  175 (260)
T cd05611         105 EVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN------KKFVGTPDYLAPETILGVGDDKMSD  175 (260)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceecccc------ccCCCCcCccChhhhcCCCCcchhh
Confidence            7899999999   899999999999999999999999999988654331      1235777899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|++++++++|..|+... .......................++..+.+++.+||+.+|++||++.++.+.
T Consensus       176 v~slG~il~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~  248 (260)
T cd05611         176 WWSLGCVIFEFLFGYPPFHAE-TPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI  248 (260)
T ss_pred             hHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence            999999999999998876533 2233333222222111122222456889999999999999999976544443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=1.5e-28  Score=176.12  Aligned_cols=149  Identities=15%  Similarity=0.251  Sum_probs=105.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-----cccCccccccccCcccccc--C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTT--G   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~--~   74 (163)
                      |++.||+|||   +++++||||||+||+++.++.+++.||+............     ......++..|+|||.+.+  .
T Consensus       109 qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (327)
T cd08227         109 GVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQ  185 (327)
T ss_pred             HHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccC
Confidence            7899999999   8999999999999999999999999998754432211100     1112345677999999876  3


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhh-------------------------------------
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL-------------------------------------  117 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------  117 (163)
                      .++.++|+||+|+++++++++..|+............ .....                                     
T Consensus       186 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (327)
T cd08227         186 GYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPR  264 (327)
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHH-hcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcC
Confidence            5889999999999999999998887532211100000 00000                                     


Q ss_pred             -----cccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          118 -----CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       118 -----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                           ....+.....++.+.+++.+||+.||++|||+.++++
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         265 PSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             ccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                 0000112234568999999999999999999999987

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.95  E-value=1.9e-28  Score=169.79  Aligned_cols=144  Identities=21%  Similarity=0.280  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~D  183 (256)
T cd08218         109 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELA--RTCIGTPYYLSPEICENRPYNNKSD  183 (256)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhh--hhccCCccccCHHHhCCCCCCCccc
Confidence            7899999999   8999999999999999999999999999987654432221  1234778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.... ..+.+.....+...   ......+.++.+++.+||+.+|++||++.++++
T Consensus       184 v~slG~i~~~l~~g~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         184 IWALGCVLYEMCTLKHAFEAGN-MKNLVLKIIRGSYP---PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             hhHHHHHHHHHHcCCCCccCCC-HHHHHHHHhcCCCC---CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            9999999999999988765433 33333333333221   122345678999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.95  E-value=5.4e-28  Score=169.94  Aligned_cols=146  Identities=17%  Similarity=0.179  Sum_probs=108.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+|++|+||+++.++.++++|||++..........   ...++..|++||.+.+..++.++|
T Consensus       115 ~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~~~~PE~~~~~~~~~~~D  188 (287)
T cd07838         115 QLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALT---SVVVTLWYRAPEVLLQSSYATPVD  188 (287)
T ss_pred             HHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccc---cccccccccChHHhccCCCCCcch
Confidence            7899999999   8999999999999999999999999999987764432221   224677899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhh---------------------h--hcccchhhHHHHHHHHHHHHhc
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE---------------------E--LCIQSSEKDKQVQAFVELAVKC  138 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------------~--~~~~~~~~~~~~~~~~~li~~c  138 (163)
                      +||+|+++++++++..++.. ....+....+...                     .  ...........+..+.+++.+|
T Consensus       189 i~s~G~~l~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  267 (287)
T cd07838         189 MWSVGCIFAELFRRRPLFRG-TSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKM  267 (287)
T ss_pred             hhhHHHHHHHHHhCCCcccC-CChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHH
Confidence            99999999999998555432 2221111111110                     0  0000011123457788999999


Q ss_pred             cccCcCCCCCHHHHHH
Q 043958          139 VSESAEDRPTMIDVAK  154 (163)
Q Consensus       139 l~~~p~~Rpt~~~i~~  154 (163)
                      |+.||++||++.+++.
T Consensus       268 l~~dp~~Rp~~~~il~  283 (287)
T cd07838         268 LTFNPHKRISAFEALQ  283 (287)
T ss_pred             hccCCccCCCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.95  E-value=9.8e-29  Score=176.40  Aligned_cols=137  Identities=23%  Similarity=0.331  Sum_probs=114.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +|+-||++||   ..+|+.||+||.|||+|..|.++|+|+|+|..+..+......   .||.+|||||++.++.|+...|
T Consensus       295 Ei~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~r---vGT~GYMAPEvl~ne~Y~~s~D  368 (591)
T KOG0986|consen  295 EIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGR---VGTVGYMAPEVLQNEVYDFSPD  368 (591)
T ss_pred             HHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccc---cCcccccCHHHHcCCcccCCcc
Confidence            6889999999   899999999999999999999999999999999877765543   7999999999999999999999


Q ss_pred             eeecchhhHHHhhhcccccccc---chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           82 VFSFAGDRHWLLNRVKKHIECN---TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      -||+||++|+|+.|..||..-.   ..+++-..+...    ....+...+++++++....|..||++|..
T Consensus       369 wf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~----~~ey~~kFS~eakslc~~LL~Kdp~~RLG  434 (591)
T KOG0986|consen  369 WFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED----PEEYSDKFSEEAKSLCEGLLTKDPEKRLG  434 (591)
T ss_pred             HHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc----hhhcccccCHHHHHHHHHHHccCHHHhcc
Confidence            9999999999999999986321   122222222222    23445677899999999999999999964

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=1.8e-28  Score=172.00  Aligned_cols=145  Identities=19%  Similarity=0.206  Sum_probs=106.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   ..+++|+||+|+||+++. +.++++|||++..........   ...++..|+|||.+.. +.++.++
T Consensus       108 qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  180 (282)
T cd07831         108 QLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPYT---EYISTRWYRAPECLLTDGYYGPKM  180 (282)
T ss_pred             HHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCCcC---CCCCCcccCChhHhhcCCCCCcch
Confidence            7899999999   899999999999999999 999999999997664332221   2346788999997654 4568899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh------------------hhhccc-------chhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR------------------EELCIQ-------SSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~-------~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..|+......+ .+.....                  ......       .......+..+.+++
T Consensus       181 Di~slGv~l~el~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  259 (282)
T cd07831         181 DIWAVGCVFFEILSLFPLFPGTNELD-QIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLL  259 (282)
T ss_pred             hHHHHHHHHHHHHcCCcCCCCCCHHH-HHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHH
Confidence            99999999999999877664433221 1111100                  000000       000123468899999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.+|++||++.++++
T Consensus       260 ~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         260 KKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHhccCcccccCHHHHhh
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=1.5e-28  Score=192.65  Aligned_cols=146  Identities=18%  Similarity=0.270  Sum_probs=109.3

Q ss_pred             hHHHHHHHHhcCC----CCCeEeccCCCCCeeeCCC-----------------CCeEECccccccccCCCCCcccccCcc
Q 043958            2 EIANALAYLHVGF----PRPIVFKNIKLSSILFDED-----------------HVAKLFDFSLAESIPDGETHIKDAIPI   60 (163)
Q Consensus         2 qi~~~l~~lh~~~----~~~~~H~dik~~nil~~~~-----------------~~~~l~dfg~~~~~~~~~~~~~~~~~~   60 (163)
                      ||+.||.|||...    .++|+||||||+|||++..                 +.++|+|||++.........   ....
T Consensus       126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~---~s~v  202 (1021)
T PTZ00266        126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMA---HSCV  202 (1021)
T ss_pred             HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccc---cccC
Confidence            7899999999311    1459999999999999642                 34899999999765433221   1336


Q ss_pred             ccccccCcccccc--CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhc
Q 043958           61 GIMGFVATEYVTT--GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKC  138 (163)
Q Consensus        61 ~~~~~~~PE~~~~--~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  138 (163)
                      +++.|+|||.+.+  ..++.++|||||||++|+|+++..||........++....... .+   .....+..+.+||..|
T Consensus       203 GTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p-~l---pi~~~S~eL~dLI~~~  278 (1021)
T PTZ00266        203 GTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGP-DL---PIKGKSKELNILIKNL  278 (1021)
T ss_pred             CCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCC-CC---CcCCCCHHHHHHHHHH
Confidence            8999999999864  3478899999999999999999998865555444443322221 11   1123457899999999


Q ss_pred             cccCcCCCCCHHHHHH
Q 043958          139 VSESAEDRPTMIDVAK  154 (163)
Q Consensus       139 l~~~p~~Rpt~~~i~~  154 (163)
                      |..+|.+||++.+++.
T Consensus       279 L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        279 LNLSAKERPSALQCLG  294 (1021)
T ss_pred             hcCChhHCcCHHHHhc
Confidence            9999999999999984

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.95  E-value=2.1e-28  Score=170.96  Aligned_cols=143  Identities=17%  Similarity=0.199  Sum_probs=109.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |+++||.|||   +.+++|+||+|+||+++.++ .++++|||++.......      ...++..|+|||.+.+..++.++
T Consensus       117 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~  187 (267)
T PHA03390        117 QLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSF  187 (267)
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc------cCCCCCcccChhhhcCCCCCchh
Confidence            7899999999   89999999999999999998 99999999987654332      22477889999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-HHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-MIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-~~~i~~  154 (163)
                      |+||+|+++++++++..|+..... ......................++.+.+++.+||+.+|.+||+ ++++++
T Consensus       188 DvwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        188 DWWAVGVLTYELLTGKHPFKEDED-EELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCCc-chhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            999999999999999888753221 1110011111111111222356788999999999999999996 688874

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.95  E-value=2e-28  Score=168.79  Aligned_cols=145  Identities=24%  Similarity=0.379  Sum_probs=111.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   ..+++|+||+|+||+++.++.++|+|||.+........   .....++..|++||.+.+..++.++|
T Consensus       106 ~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~D  179 (253)
T cd05122         106 ELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---RNTMVGTPYWMAPEVINGKPYDYKAD  179 (253)
T ss_pred             HHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---ccceecCCcccCHHHHcCCCCCcccc
Confidence            7889999999   89999999999999999999999999999876655432   12345778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+........... ..... ..........+..+.+++.+||+.+|++|||+.++++
T Consensus       180 v~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         180 IWSLGITAIELAEGKPPYSELPPMKALFK-IATNG-PPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCchHHHHHH-HHhcC-CCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999999999999877654322222211 11111 1111112223678999999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.95  E-value=1.6e-28  Score=176.64  Aligned_cols=151  Identities=17%  Similarity=0.191  Sum_probs=108.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCcccccc-CCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTT-GDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~-~~~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++.......... ......++..|+|||.+.+ ..++.+
T Consensus       114 ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (336)
T cd07849         114 QILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKA  190 (336)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcH
Confidence            7899999999   8999999999999999999999999999987654332211 1123457888999998754 458889


Q ss_pred             cceeecchhhHHHhhhccccccccchhh--------------ccchhh----hhh---hc--ccch---hhHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDE--------------IVDPVI----REE---LC--IQSS---EKDKQVQAFVE  133 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~--------------~~~~~~----~~~---~~--~~~~---~~~~~~~~~~~  133 (163)
                      +|+||+|++++++++|..|+........              ......    ...   ..  ...+   .....+..+.+
T Consensus       191 ~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (336)
T cd07849         191 IDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALD  270 (336)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHH
Confidence            9999999999999999877643321110              000000    000   00  0000   01123567899


Q ss_pred             HHHhccccCcCCCCCHHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      ++.+||+.+|++|||+.++++.
T Consensus       271 li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         271 LLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHHHcCCChhhCcCHHHHhcC
Confidence            9999999999999999999874

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.95  E-value=3.6e-28  Score=171.06  Aligned_cols=146  Identities=21%  Similarity=0.340  Sum_probs=111.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   ..+++|+|++|+||+++.++.++++|||++..........  ....++..|++||.+.+..++.++|
T Consensus       124 ~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~D  198 (286)
T cd06614         124 EVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKR--NSVVGTPYWMAPEVIKRKDYGPKVD  198 (286)
T ss_pred             HHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhh--ccccCCcccCCHhHhcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999886554332211  1334677899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|++++++++|..|+......... ....... ..........+..+.+++.+||+.+|..|||+.+++.
T Consensus       199 v~slGvil~~l~~g~~p~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         199 IWSLGIMCIEMAEGEPPYLREPPLRAL-FLITTKG-IPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             cHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhcC-CCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            999999999999998886543332221 1111111 1122222335678999999999999999999999985

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=2.3e-28  Score=175.83  Aligned_cols=149  Identities=20%  Similarity=0.216  Sum_probs=108.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc---ccccCccccccccCcccccc-CCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH---IKDAIPIGIMGFVATEYVTT-GDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~-~~~~   77 (163)
                      |++.||+|||   +++++|+||||+||+++.++.++++|||++.........   .......++..|+|||.+.+ ..++
T Consensus       115 qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  191 (337)
T cd07852         115 QLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYT  191 (337)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeecccccc
Confidence            7899999999   899999999999999999999999999998766443321   11223457889999998765 4578


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhh---------------------------hhcccchhhHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE---------------------------ELCIQSSEKDKQVQA  130 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~  130 (163)
                      .++|+||+|+++++++++..|+........ .......                           ............+.+
T Consensus       192 ~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (337)
T cd07852         192 KGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDD  270 (337)
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHH
Confidence            899999999999999999877643322211 1000000                           000000011124577


Q ss_pred             HHHHHHhccccCcCCCCCHHHHHH
Q 043958          131 FVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       131 ~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+++.+||+.+|++|||+.++++
T Consensus       271 l~~li~~~l~~~P~~Rps~~~il~  294 (337)
T cd07852         271 ALDLLKKLLVFNPNKRLTAEEALE  294 (337)
T ss_pred             HHHHHHHhccCCcccccCHHHHhh
Confidence            899999999999999999999987

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.95  E-value=2.5e-28  Score=172.49  Aligned_cols=148  Identities=13%  Similarity=0.119  Sum_probs=107.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~   79 (163)
                      ||+.||.|||   .++++|+||+|+||+++. ++.++++|||++..........  ....++..|+|||.+.+ ..++.+
T Consensus       118 qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~  192 (295)
T cd07837         118 QLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY--THEIVTLWYRAPEVLLGSTHYSTP  192 (295)
T ss_pred             HHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCcccc--CCcccccCCCChHHhhCCCCCCch
Confidence            7899999999   899999999999999998 8899999999987553322111  12246778999998865 347889


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhh------------------hhhc-----ccchhhHHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR------------------EELC-----IQSSEKDKQVQAFVELAV  136 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-----~~~~~~~~~~~~~~~li~  136 (163)
                      +|+||+|+++++++++..|+.......+.......                  ....     .........+.++.+++.
T Consensus       193 ~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  272 (295)
T cd07837         193 VDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQ  272 (295)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHH
Confidence            99999999999999998777654433322111000                  0000     000011235677999999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||..+|++||++.+++.
T Consensus       273 ~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         273 KMLRYDPAKRISAKAALT  290 (295)
T ss_pred             HHccCChhhcCCHHHHhc
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=1.1e-28  Score=181.36  Aligned_cols=144  Identities=23%  Similarity=0.321  Sum_probs=122.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||++||.|||.. .++|||||||-+||+++ ..|.+||+|+|+|.........    ...||+.|||||... ..|+...
T Consensus       151 QILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ak----svIGTPEFMAPEmYE-E~YnE~V  224 (632)
T KOG0584|consen  151 QILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAK----SVIGTPEFMAPEMYE-ENYNELV  224 (632)
T ss_pred             HHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccccc----eeccCccccChHHHh-hhcchhh
Confidence            799999999965 67999999999999995 5589999999999777654443    347999999999776 7899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||||+=++||.++.+||....+..+++.++..+..+  .....-..+++++||.+|+.. .+.|+|+.|+++
T Consensus       225 DVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP--~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  225 DVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKP--AALSKVKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             hhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCH--HHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            99999999999999999999988988999998887532  122222357899999999999 999999999986

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.95  E-value=2.7e-28  Score=171.41  Aligned_cols=148  Identities=14%  Similarity=0.142  Sum_probs=106.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      |++.||+|||   ..+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+.. ++.++
T Consensus       108 ~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  182 (284)
T cd07860         108 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCKYYSTAV  182 (284)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcccc--ccccccccccCCeEEecCCCCCcHH
Confidence            7899999999   8999999999999999999999999999986554322111  1234677899999887644 57889


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhh-------------------hcc-cc----hhhHHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE-------------------LCI-QS----SEKDKQVQAFVELAV  136 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~-~~----~~~~~~~~~~~~li~  136 (163)
                      |+||+|+++++++++..|+.................                   ... ..    ......+..+.+++.
T Consensus       183 Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  262 (284)
T cd07860         183 DIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLS  262 (284)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHH
Confidence            999999999999999887754433222111110000                   000 00    001123467889999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+.||++|||+.++++
T Consensus       263 ~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         263 QMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HhcCCCcccCCCHHHHhc
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.1e-28  Score=174.55  Aligned_cols=147  Identities=19%  Similarity=0.254  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc---------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI---------------------------   54 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------------------------   54 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........                           
T Consensus       111 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (316)
T cd05574         111 EVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSF  187 (316)
T ss_pred             HHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccC
Confidence            7899999999   8999999999999999999999999999986543221110                           


Q ss_pred             cccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHH
Q 043958           55 KDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVEL  134 (163)
Q Consensus        55 ~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  134 (163)
                      ......|+..|+|||.+.+..++.++|+||+|+++|+++++..|+..... ............  ..+.....+..+.++
T Consensus       188 ~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~l  264 (316)
T cd05574         188 RSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR-DETFSNILKKEV--TFPGSPPVSSSARDL  264 (316)
T ss_pred             CCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch-HHHHHHHhcCCc--cCCCccccCHHHHHH
Confidence            11123577889999999888889999999999999999999888754332 222222222221  112222257889999


Q ss_pred             HHhccccCcCCCCC----HHHHHH
Q 043958          135 AVKCVSESAEDRPT----MIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt----~~~i~~  154 (163)
                      +.+||..+|++|||    +++++.
T Consensus       265 i~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         265 IRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHccCCHhHCCCchhhHHHHHc
Confidence            99999999999999    777766

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.95  E-value=5.8e-28  Score=167.25  Aligned_cols=143  Identities=17%  Similarity=0.310  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|.||+++.+ +.++++|||.+..........   ...++..|+|||.+.+..++.++
T Consensus       109 ~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  182 (256)
T cd08220         109 QILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAY---TVVGTPCYISPELCEGKPYNQKS  182 (256)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcccc---ccccCCcccCchhccCCCCCccc
Confidence            6899999999   8999999999999999755 457999999997765433221   23577789999999888889999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..++... ..............   .......+..+.+++.+||..+|++|||+.++++
T Consensus       183 Dv~slG~~l~~l~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         183 DIWALGCVLYELASLKRAFEAA-NLPALVLKIMSGTF---APISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             chHHHHHHHHHHHhCCCCcccC-chHHHHHHHHhcCC---CCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            9999999999999998776433 22233333222211   1112235678999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.2e-28  Score=171.69  Aligned_cols=146  Identities=23%  Similarity=0.353  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |++.||.|||   +.+++|+|++|+||+++.++.++++|||++..........  ....++..|++||.+.     ...+
T Consensus       111 ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~  185 (280)
T cd06611         111 QMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKR--DTFIGTPYWMAPEVVACETFKDNPY  185 (280)
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhccccccc--ceeecchhhcCHHHHhhcccCCCCC
Confidence            7899999999   8999999999999999999999999999876543322111  1235788899999875     2346


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++|+++++..|+....... ......... .+........+..+.+++.+||+.+|++||++.++++
T Consensus       186 ~~~sDi~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (280)
T cd06611         186 DYKADIWSLGITLIELAQMEPPHHELNPMR-VLLKILKSE-PPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK  261 (280)
T ss_pred             CccccHHHHHHHHHHHHhCCCCcccCCHHH-HHHHHhcCC-CCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence            789999999999999999988765433222 222221111 1111122345678999999999999999999999986

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.95  E-value=5.8e-28  Score=172.46  Aligned_cols=143  Identities=24%  Similarity=0.375  Sum_probs=109.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||.|||   ..+++|+||+|+||+++.++.++++|||++.......      ...++..|+|||.+.   .+.++.
T Consensus       133 ~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  203 (317)
T cd06635         133 GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPAN------SFVGTPYWMAPEVILAMDEGQYDG  203 (317)
T ss_pred             HHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCcc------cccCCccccChhhhhcCCCCCCCc
Confidence            6899999999   8999999999999999999999999999886543321      235777899999874   356788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      ++|+||+|+++++++++..|+......... ........  ........+..+.+++.+||+.+|++||++.++++.+
T Consensus       204 ~~Dv~slGvil~el~~g~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         204 KVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNES--PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCccHHHHH-HHHHhccC--CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            999999999999999998887654322221 11211111  1111224556799999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=2.1e-28  Score=184.74  Aligned_cols=146  Identities=22%  Similarity=0.302  Sum_probs=112.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---C--CCeEECccccccccCCCCCc-ccccCccccccccCccccccCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---D--HVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~--~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~   75 (163)
                      |+++||++||   +.+|+|||+||+|||++.   +  ..++|+|||+++....+... .......||-+|+|||.+....
T Consensus       614 q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~  690 (903)
T KOG1027|consen  614 QIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR  690 (903)
T ss_pred             HHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc
Confidence            7899999999   899999999999999976   3  46799999999988766543 2234567999999999999888


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhh-HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEK-DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+.++|+||+||+++++++++..++.+.--.+ .+ ++.+.+....-.. ..+  +..+||.+|++.+|..||++.+++.
T Consensus       691 ~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-~N-Il~~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  691 KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-AN-ILTGNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             cCcccchhhcCceEEEEecCCccCCCchHHhh-hh-hhcCccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            88899999999999999999877775432221 11 2222222221111 122  8999999999999999999999874

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.95  E-value=7.2e-28  Score=169.94  Aligned_cols=148  Identities=16%  Similarity=0.163  Sum_probs=106.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+. .++.++
T Consensus       111 qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  185 (291)
T cd07870         111 QLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTY--SSEVVTLWYRPPDVLLGATDYSSAL  185 (291)
T ss_pred             HHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCC--CCccccccccCCceeecCCCCCcHH
Confidence            7899999999   8999999999999999999999999999986543322111  123467889999988754 478899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh--------------------h-hc--ccchh-----hHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE--------------------E-LC--IQSSE-----KDKQVQAFV  132 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~-~~--~~~~~-----~~~~~~~~~  132 (163)
                      |+||+|+++++++++..|+.......+.+......                    . ..  .....     ....+..+.
T Consensus       186 Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (291)
T cd07870         186 DIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAE  265 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHH
Confidence            99999999999999988765332211111110000                    0 00  00000     001246788


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+|+..||++|||+.+++.
T Consensus       266 ~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         266 DLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHHHHHhCcCcccCcCHHHHhc
Confidence            9999999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=2.2e-28  Score=173.37  Aligned_cols=147  Identities=16%  Similarity=0.187  Sum_probs=106.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+. .++.++
T Consensus       112 qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~  186 (301)
T cd07873         112 QLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY--SNEVVTLWYRPPDILLGSTDYSTQI  186 (301)
T ss_pred             HHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcc--cccceeecccCcHHHhCCCCCccHH
Confidence            7899999999   8999999999999999999999999999986543322111  123467889999988654 478899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh---------------h----hhccc-------chhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR---------------E----ELCIQ-------SSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------------~----~~~~~-------~~~~~~~~~~~~~l  134 (163)
                      |+||+|++++++++|..|+..... .+.......               .    ....+       .......++.+.++
T Consensus       187 Dv~slG~~l~el~tg~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  265 (301)
T cd07873         187 DMWGVGCIFYEMSTGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAEL  265 (301)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHH
Confidence            999999999999999877654322 111110000               0    00000       00112345678999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+|+..||.+|||+.++++
T Consensus       266 i~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         266 LSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HHHHhcCCcccCcCHHHHhc
Confidence            99999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=3e-28  Score=171.40  Aligned_cols=146  Identities=19%  Similarity=0.273  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||+  ..+++|+||+|+||+++.++.++++|||++........    ....++..|+|||.+.+..++.++|
T Consensus       111 ~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~D  184 (284)
T cd06620         111 AVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIA----DTFVGTSTYMSPERIQGGKYTVKSD  184 (284)
T ss_pred             HHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhcc----CccccCcccCCHHHHccCCCCccch
Confidence            68899999993  25899999999999999999999999999865432221    1335788999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccch----------hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTF----------DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      +||+|+++++++++..|+......          .+.........  .........+..+.+++.+||+.||++|||+.+
T Consensus       185 i~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e  262 (284)
T cd06620         185 VWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP--PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQ  262 (284)
T ss_pred             HHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHH
Confidence            999999999999998887543321          11122222111  111111235678999999999999999999999


Q ss_pred             HHHH
Q 043958          152 VAKQ  155 (163)
Q Consensus       152 i~~~  155 (163)
                      +++.
T Consensus       263 ~~~~  266 (284)
T cd06620         263 LCAM  266 (284)
T ss_pred             HhcC
Confidence            9874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=4.5e-28  Score=172.39  Aligned_cols=142  Identities=24%  Similarity=0.369  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++.......      ...++..|+|||.+.   .+.++.
T Consensus       123 ~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~~  193 (308)
T cd06634         123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILAMDEGQYDG  193 (308)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCcc------cccCCccccCHHHHhhcccCCCCc
Confidence            6889999999   8999999999999999999999999999986654322      234677899999875   345788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      ++|+||+|+++++++++..|+........... .....  .........+..+.+++.+||+.+|++||++.+++..
T Consensus       194 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         194 KVDVWSLGITCIELAERKPPLFNMNAMSALYH-IAQNE--SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             ccchHHHHHHHHHHHcCCCCCccccHHHHHHH-HhhcC--CCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            99999999999999999888754332222111 11111  1111122456789999999999999999999998864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=4.5e-28  Score=170.36  Aligned_cols=148  Identities=18%  Similarity=0.214  Sum_probs=106.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++......... ......++..|+|||.+.+. .++.++
T Consensus       107 ~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~  182 (286)
T cd07832         107 MLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPR-LYSHQVATRWYRAPELLYGARKYDPGV  182 (286)
T ss_pred             HHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCC-ccccccCcccccCceeeeccccCCchh
Confidence            7899999999   899999999999999999999999999998766543321 11234578899999988654 468899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh-------------------hhccc-------chhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------ELCIQ-------SSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~-------~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..++. .....+........                   .....       .....+.+..+.++
T Consensus       183 Di~slG~~l~~l~tg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  261 (286)
T cd07832         183 DLWAVGCIFAELLNGSPLFP-GENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDL  261 (286)
T ss_pred             HHHHHHHHHHHHHcCCcCcC-CCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHH
Confidence            99999999999999954443 22211111110000                   00000       00011345789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.+|++|||+++++.
T Consensus       262 i~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         262 LKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHHhccChhhCCCHHHHhh
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.95  E-value=2.9e-28  Score=171.45  Aligned_cols=149  Identities=19%  Similarity=0.236  Sum_probs=109.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||.|||   ..+++|+|++|.||+++.++.++++|||++........... ....++..|+|||.+.+. .++.++
T Consensus       108 ~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~-~~~~~~~~~~~PE~~~~~~~~~~~~  183 (288)
T cd07833         108 QLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPL-TDYVATRWYRAPELLVGDTNYGKPV  183 (288)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccc-cCcccccCCcCCchhcCCCCcCchh
Confidence            7899999999   89999999999999999999999999999876654433111 134577889999999887 788999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchh-------------------hhh-hhc-cc------chhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPV-------------------IRE-ELC-IQ------SSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~-------------------~~~-~~~-~~------~~~~~~~~~~~~~  133 (163)
                      |+||+|+++++++++..++........+....                   ... ... ..      .......+..+.+
T Consensus       184 Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (288)
T cd07833         184 DVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALD  263 (288)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHH
Confidence            99999999999999977654332211111000                   000 000 00      0011123678999


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++++||..+|++|||++++++
T Consensus       264 li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         264 FLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHHhccCchhcccHHHHhc
Confidence            999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.95  E-value=4.7e-28  Score=168.45  Aligned_cols=145  Identities=23%  Similarity=0.295  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++........   .....++..|++||.+.+..++.++|
T Consensus       101 ~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~D  174 (262)
T cd05572         101 CVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK---TWTFCGTPEYVAPEIILNKGYDFSVD  174 (262)
T ss_pred             HHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc---cccccCCcCccChhHhcCCCCCChhh
Confidence            7899999999   89999999999999999999999999999876654421   11235778899999988888899999


Q ss_pred             eeecchhhHHHhhhccccccccc-hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT-FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||+|+++++++++..|+..... ..+............  ......+..+.+++.+||..+|++||+     +.++++
T Consensus       175 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         175 YWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKL--EFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             hhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCC--CCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            99999999999999888764431 222222222111111  112223678999999999999999999     777776

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.95  E-value=2e-28  Score=171.98  Aligned_cols=147  Identities=17%  Similarity=0.196  Sum_probs=107.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +++++|+|++|+||+++.++.++++|||++..........  ....++..|+|||.+.+. .++.++
T Consensus       107 ~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  181 (283)
T cd07835         107 QLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGSRQYSTPV  181 (283)
T ss_pred             HHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc--CccccccCCCCCceeecCcccCcHH
Confidence            7899999999   8999999999999999999999999999987554332211  122457789999988664 468899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh-------------------------hhcccchhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------------ELCIQSSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..|+.......+.... ...                         ............+..+.+++
T Consensus       182 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  260 (283)
T cd07835         182 DIWSIGCIFAEMVNRRPLFPGDSEIDQLFRI-FRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLL  260 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHH
Confidence            9999999999999998776544332221110 000                         00000011122346789999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.+|++|||+.++++
T Consensus       261 ~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         261 SKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             HHHhcCChhhCcCHHHHhc
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.95  E-value=3.9e-28  Score=174.50  Aligned_cols=150  Identities=17%  Similarity=0.234  Sum_probs=109.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCcccccc-CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTT-GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~-~~~~~   78 (163)
                      |++.||+|||   ..+++|+||||+||+++.++.++++|||++..........  ......++..|+|||.+.+ ..++.
T Consensus       115 qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  191 (334)
T cd07855         115 QLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTT  191 (334)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCccccc
Confidence            7899999999   8999999999999999999999999999987654432211  1123357888999998865 45788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhh--------------ccchhhhh-------hhccc-ch----hhHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDE--------------IVDPVIRE-------ELCIQ-SS----EKDKQVQAFV  132 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~--------------~~~~~~~~-------~~~~~-~~----~~~~~~~~~~  132 (163)
                      ++|+||+|+++++++++..||........              +.......       ..... ..    .....+..+.
T Consensus       192 ~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (334)
T cd07855         192 AIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEAL  271 (334)
T ss_pred             ccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHH
Confidence            99999999999999999887754332111              00000000       00000 00    0123467899


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+||+.+|++|||+.+++.
T Consensus       272 ~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         272 DLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999999999886

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=5.2e-28  Score=171.11  Aligned_cols=147  Identities=19%  Similarity=0.170  Sum_probs=106.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |+++||.|||   +++++|+||+|+||+++.++.++++|||++...........  ...++..|+|||.+.+ ..++.++
T Consensus       110 qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~  184 (298)
T cd07841         110 MTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMT--HQVVTRWYRAPELLFGARHYGVGV  184 (298)
T ss_pred             HHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcccc--ccccceeeeCHHHHhCCCCCCcHH
Confidence            7899999999   89999999999999999999999999999977654332211  2245678999998865 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhh----------------h--------cccchhhHHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE----------------L--------CIQSSEKDKQVQAFVELAV  136 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~--------~~~~~~~~~~~~~~~~li~  136 (163)
                      |+||+|+++++++++..++. .....+.........                .        ..........+..+.+++.
T Consensus       185 Dv~slG~il~e~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  263 (298)
T cd07841         185 DMWSVGCIFAELLLRVPFLP-GDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQ  263 (298)
T ss_pred             HHHHHHHHHHHHHcCCcccc-CCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHH
Confidence            99999999999999944433 222211111111000                0        0000011234578999999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+.+|++|||+.+++.
T Consensus       264 ~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         264 RLLTLNPNKRITARQALE  281 (298)
T ss_pred             HHhcCCcccCcCHHHHhh
Confidence            999999999999999987

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=4.3e-28  Score=170.86  Aligned_cols=146  Identities=21%  Similarity=0.285  Sum_probs=109.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   ..+++|+|++|+||+++.++.++++|||++.........    ...++..|++||.+.+..++.++|
T Consensus       113 ~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~~~~~~y~~pE~~~~~~~~~~~D  185 (287)
T cd06621         113 SVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAG----TFTGTSFYMAPERIQGKPYSITSD  185 (287)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccccccccc----cccCCccccCHHHhcCCCCCchhh
Confidence            6899999999   899999999999999999999999999998655432221    224677899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccc----hhhccchhhhhhhc-c--cchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT----FDEIVDPVIREELC-I--QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~----~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.....    ..+........... .  ........++.+.+++.+||+.+|++|||+.++++
T Consensus       186 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         186 VWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            99999999999999888754421    11111111110000 0  00111234578999999999999999999999987

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=5.1e-28  Score=169.49  Aligned_cols=145  Identities=21%  Similarity=0.334  Sum_probs=109.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||.|||   ..+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.++ .++.++
T Consensus       109 ~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  183 (277)
T cd06917         109 EVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKR--STFVGTPYWMAPEVITEGKYYDTKA  183 (277)
T ss_pred             HHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcccc--ccccCCcceeCHHHhccCCccccch
Confidence            6889999999   8999999999999999999999999999987765443221  233578889999988654 468899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++|+++++..|+......... .......  .........+.++.+++.+||+.+|++||++.+++.
T Consensus       184 Dv~slG~~l~~ll~g~~p~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         184 DIWSLGITIYEMATGNPPYSDVDAFRAM-MLIPKSK--PPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChhhhh-hccccCC--CCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            9999999999999988876543322211 1111111  111111125678999999999999999999999976

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.95  E-value=5e-28  Score=169.90  Aligned_cols=143  Identities=22%  Similarity=0.311  Sum_probs=108.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........    ....++..|+|||.+.++ .++.++
T Consensus       105 ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~~  177 (278)
T cd05606         105 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSA  177 (278)
T ss_pred             HHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCC----cCcCCCcCCcCcHHhcCCCCCCccc
Confidence            7899999999   89999999999999999999999999999865533221    123588899999998754 588999


Q ss_pred             ceeecchhhHHHhhhccccccccchh-hccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFD-EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      |+||+|+++++++++..|+....... .........   .........+..+.+++.+|+..+|++||     ++.++++
T Consensus       178 Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         178 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             chHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc---cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            99999999999999988875432111 111111111   11111223467899999999999999999     8988875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=3.4e-28  Score=184.52  Aligned_cols=147  Identities=18%  Similarity=0.130  Sum_probs=97.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCcccccCccccccccCccccccC------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG------   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~------   74 (163)
                      |++.||+|||   +++|+||||||+|||++. ++.+||+|||+++.......... ....+++.|+|||.+...      
T Consensus       263 qll~aL~yLH---~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~-~~~~~t~~Y~APE~~~~~~~~~~~  338 (566)
T PLN03225        263 QILFALDGLH---STGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIP-KEFLLDPRYAAPEQYIMSTQTPSA  338 (566)
T ss_pred             HHHHHHHHHH---HCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCC-cccccCCCccChHHhhccCCCCCC
Confidence            6889999999   899999999999999985 57899999999976644332222 234678899999965322      


Q ss_pred             ----------------CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhh---------hcccch-h-----
Q 043958           75 ----------------DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE---------LCIQSS-E-----  123 (163)
Q Consensus        75 ----------------~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~-~-----  123 (163)
                                      .++.++||||+||++++++.+..+.  ...............         ...... .     
T Consensus       339 ~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (566)
T PLN03225        339 PSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRS--DSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGF  416 (566)
T ss_pred             ccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCC--chHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhh
Confidence                            2344679999999999999744331  111111110000000         000000 0     


Q ss_pred             --hHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          124 --KDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       124 --~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                        .........+|+.+||+.||++|||+.++++
T Consensus       417 ~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        417 EVLDLDGGAGWELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             hhccccchHHHHHHHHHccCCcccCCCHHHHhC
Confidence              0001123458999999999999999999986

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.95  E-value=4.3e-28  Score=168.50  Aligned_cols=145  Identities=18%  Similarity=0.331  Sum_probs=114.3

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   + .+++|+||+|+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++
T Consensus       107 ~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~  181 (264)
T cd06623         107 QILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC--NTFVGTVTYMSPERIQGESYSYAA  181 (264)
T ss_pred             HHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc--cceeecccccCHhhhCCCCCCchh
Confidence            7899999999   8 999999999999999999999999999987665433322  123577889999999888889999


Q ss_pred             ceeecchhhHHHhhhcccccccc--chhhccchhhhhhhcccchhhHH-HHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECN--TFDEIVDPVIREELCIQSSEKDK-QVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||||+++++++++..|+....  ...+.........   ....... .+..+.+++.+||..+|++||++.++++
T Consensus       182 Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         182 DIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGP---PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             hHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCC---CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            99999999999999988875543  3333333333221   1111222 5678999999999999999999999987

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=5.6e-28  Score=169.56  Aligned_cols=147  Identities=18%  Similarity=0.194  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||.|||   ..+++|+||+|+||+++.++.++++|||.+.........  .....++..|++||.+.+. .++.++
T Consensus       106 ~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~~  180 (283)
T cd05118         106 QLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRP--YTHYVVTRWYRAPELLLGDKGYSTPV  180 (283)
T ss_pred             HHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccc--ccCccCcccccCcHHHhcCCCCCchh
Confidence            7899999999   899999999999999999999999999998766544311  1123577789999998776 688899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh--------------------------hhcccchhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE--------------------------ELCIQSSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..++......+.... ....                          ............+..+.++
T Consensus       181 Di~slG~~l~~l~tg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (283)
T cd05118         181 DIWSVGCIFAELLSRRPLFPGKSEIDQLFK-IFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDL  259 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHH
Confidence            999999999999999877654433221110 0000                          0000001123456789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.+|.+||++.+++.
T Consensus       260 i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         260 LSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             HHHHhccCcccCcCHHHHhh
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.95  E-value=4.6e-28  Score=171.60  Aligned_cols=141  Identities=21%  Similarity=0.248  Sum_probs=121.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCC-ccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~-~~~   80 (163)
                      ||.+|+.|+|   .++++|||+|.+|||+|.|+++||+|||++..+...+-.+   ++.|++-|.+||++.+.+|. ...
T Consensus       161 QIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLq---TFCGSPLYASPEIvNG~PY~GPEV  234 (668)
T KOG0611|consen  161 QIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQ---TFCGSPLYASPEIVNGTPYKGPEV  234 (668)
T ss_pred             HHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhccccHHH---HhcCCcccCCccccCCCCCCCCcc
Confidence            7999999999   9999999999999999999999999999997776655444   34699999999999998885 479


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |.||+|+++|.+++|..||. ......++.++..+.++.+...     .....||++||..+|++|.|+++|..
T Consensus       235 DsWsLGvLLYtLVyGtMPFD-G~Dhk~lvrQIs~GaYrEP~~P-----SdA~gLIRwmLmVNP~RRATieDiAs  302 (668)
T KOG0611|consen  235 DSWSLGVLLYTLVYGTMPFD-GRDHKRLVRQISRGAYREPETP-----SDASGLIRWMLMVNPERRATIEDIAS  302 (668)
T ss_pred             chhhHHHHHHHHhhcccccC-CchHHHHHHHhhcccccCCCCC-----chHHHHHHHHHhcCcccchhHHHHhh
Confidence            99999999999999988875 5566778888888876544333     46789999999999999999999875

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.95  E-value=7.7e-28  Score=167.73  Aligned_cols=149  Identities=19%  Similarity=0.333  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCccc--ccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIK--DAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +++++|+||+|+||+++.++ .++++|||.+...........  .....++..|+|||.+.+..++.
T Consensus       111 ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~  187 (268)
T cd06630         111 QLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGR  187 (268)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCc
Confidence            7899999999   89999999999999998776 589999999877654322111  11235778899999998888899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhh-hcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE-LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+..... ........... ...........++.+.+++.+||..+|++|||+.+++.
T Consensus       188 ~~Dv~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         188 SCDVWSVGCVIIEMATAKPPWNAEKH-SNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCCC-cchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            99999999999999999877643221 11111111100 00112223346688999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.95  E-value=6.3e-28  Score=171.66  Aligned_cols=146  Identities=16%  Similarity=0.269  Sum_probs=107.5

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   + .+++|+||||+||+++.++.++++|||++........    ....++..|++||.+.+..++.++
T Consensus       107 ~i~~~l~~lH---~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~aPE~~~~~~~~~~~  179 (308)
T cd06615         107 AVLRGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYTVQS  179 (308)
T ss_pred             HHHHHHHHHH---hhCCEEECCCChHHEEEecCCcEEEccCCCccccccccc----ccCCCCcCccChhHhcCCCCCccc
Confidence            7899999999   5 5899999999999999999999999999865543222    133578899999998888889999


Q ss_pred             ceeecchhhHHHhhhccccccccchh--hccchhhh--------------------------------hhhcccchhhHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFD--EIVDPVIR--------------------------------EELCIQSSEKDK  126 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~--~~~~~~~~--------------------------------~~~~~~~~~~~~  126 (163)
                      |+||+|+++++++++..|+.......  ........                                ....+ ......
T Consensus       180 DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  258 (308)
T cd06615         180 DIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPP-KLPSGA  258 (308)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCc-cCcCcc
Confidence            99999999999999988764322110  00000000                                00000 000112


Q ss_pred             HHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958          127 QVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       127 ~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      .+.++.+++.+||..+|++|||+.++++.
T Consensus       259 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         259 FSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            45679999999999999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.95  E-value=3.8e-28  Score=168.28  Aligned_cols=144  Identities=22%  Similarity=0.278  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++........   .....++..|++||.+.... ++.++
T Consensus       110 ~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~~  183 (258)
T cd06632         110 QILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSF---AKSFKGSPYWMAPEVIAQQGGYGLAA  183 (258)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceecccccc---ccccCCCcceeCHHHhcCCCCCCchh
Confidence            6899999999   89999999999999999999999999999876544331   12345778899999987766 88999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+............ ....  .........+..+.+++.+||..+|++||++.+++.
T Consensus       184 D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         184 DIWSLGCTVLEMATGKPPWSQLEGVAAVFKI-GRSK--ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             hhHHHHHHHHHHHhCCCCcccCcHHHHHHHH-Hhcc--cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            9999999999999998886543322222211 1101  111122345678999999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.95  E-value=7.9e-28  Score=167.09  Aligned_cols=147  Identities=17%  Similarity=0.220  Sum_probs=114.2

Q ss_pred             hHHHHHHHHhcCC--CCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGF--PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~--~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||+|||...  +.+++|+||+|+||+++.++.++++|||++...........  ...++..|++||.+.+..++.+
T Consensus       113 ~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~--~~~~~~~~~~pE~~~~~~~~~~  190 (265)
T cd08217         113 QLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSSFAK--TYVGTPYYMSPEQLNHMSYDEK  190 (265)
T ss_pred             HHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCccccc--ccccCCCccChhhhcCCCCCch
Confidence            7899999999432  46899999999999999999999999999877654432111  2357889999999988888999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+|+++++++++..|+.... ..++.........   .......+..+.+++.+|++.+|++||++.++++
T Consensus       191 ~Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         191 SDIWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKF---RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             hHHHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCC---CCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            999999999999999988765433 3333333222221   1122345678999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.95  E-value=9.1e-28  Score=167.29  Aligned_cols=146  Identities=18%  Similarity=0.219  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++......... .......++..|+|||.+.+..++.++
T Consensus       114 ~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (265)
T cd06652         114 QILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKA  190 (265)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcch
Confidence            6899999999   899999999999999999999999999998755322111 111223477889999999888889999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+.......... .......  ........+..+.+++.+|+. +|++||+++++++
T Consensus       191 Dv~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         191 DIWSVGCTVVEMLTEKPPWAEFEAMAAIF-KIATQPT--NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             hHHHHHHHHHHHhhCCCCCCccchHHHHH-HHhcCCC--CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            99999999999999988765433232221 1111111  111223455778899999995 9999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.95  E-value=6.8e-28  Score=170.35  Aligned_cols=146  Identities=18%  Similarity=0.254  Sum_probs=111.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|.||+++.++.++++|||++..........  ....++..|++||.+.+..++.++|
T Consensus       124 ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~~pE~~~~~~~~~~~D  198 (292)
T cd06657         124 AVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVD  198 (292)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccc--cccccCccccCHHHhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999986654332111  1235778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+....... .+... ..............+..+.+++.+||+.+|.+||++.+++.
T Consensus       199 v~slGvil~el~tg~~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         199 IWSLGIMVIEMVDGEPPYFNEPPLK-AMKMI-RDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHH-HHHHH-HhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            9999999999999988765433222 11111 11111111122235567899999999999999999999887

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.94  E-value=9e-28  Score=171.23  Aligned_cols=141  Identities=22%  Similarity=0.360  Sum_probs=108.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++......      ....++..|+|||.+.   ...++.
T Consensus       129 qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~  199 (313)
T cd06633         129 GALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA------NSFVGTPYWMAPEVILAMDEGQYDG  199 (313)
T ss_pred             HHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC------CCccccccccChhhccccCCCCCCc
Confidence            7899999999   899999999999999999999999999988543222      1335778899999884   356788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+............. ...  .........+..+.+++.+||+.+|.+||++.+++.
T Consensus       200 ~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         200 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIA-QND--SPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-hcC--CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999988876544333222211 111  111112234567999999999999999999999886

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.94  E-value=5.5e-28  Score=171.92  Aligned_cols=147  Identities=17%  Similarity=0.199  Sum_probs=107.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++...........  ...++..|+|||.+.+ ..++.++
T Consensus       116 qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~  190 (309)
T cd07845         116 QLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMT--PKVVTLWYRAPELLLGCTTYTTAI  190 (309)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCC--cccccccccChhhhcCCCCcCchH
Confidence            7899999999   89999999999999999999999999999977654322111  2235678999998875 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh-------------------hhcc---cch----hhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------ELCI---QSS----EKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~---~~~----~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..|+....... .+......                   ....   ...    .....++.+.++
T Consensus       191 DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  269 (309)
T cd07845         191 DMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRL  269 (309)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHH
Confidence            99999999999999987765433222 11111100                   0000   000    011236778999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+|++.||++|||+.+++.
T Consensus       270 i~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         270 LNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             HHHHhcCChhhCcCHHHHhc
Confidence            99999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.94  E-value=1.2e-27  Score=167.37  Aligned_cols=144  Identities=15%  Similarity=0.238  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC--------------------CCCeEECccccccccCCCCCcccccCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--------------------DHVAKLFDFSLAESIPDGETHIKDAIPIG   61 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~--------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~   61 (163)
                      |++++++|||   +.+++|.|+||+|||+..                    +..++|+|||.+........     ..+.
T Consensus       200 QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs-----~iVs  271 (415)
T KOG0671|consen  200 QLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHS-----TIVS  271 (415)
T ss_pred             HHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcc-----eeee
Confidence            8999999999   999999999999999822                    23478999999977655542     4567


Q ss_pred             cccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhh--ccchhhhhhhc-----------------c---
Q 043958           62 IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDE--IVDPVIREELC-----------------I---  119 (163)
Q Consensus        62 ~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~-----------------~---  119 (163)
                      |..|.|||++.+.+++..+||||+||++.|+.+|...|..-++.+.  +++.++. +.+                 +   
T Consensus       272 TRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~  350 (415)
T KOG0671|consen  272 TRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWP  350 (415)
T ss_pred             ccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCc
Confidence            8899999999999999999999999999999999887775543321  2221111 000                 0   


Q ss_pred             --------------------cchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          120 --------------------QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       120 --------------------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                                          .......+...+.+|++.||..||.+|+|+.|++.
T Consensus       351 e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  351 EVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             cccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                                00111234467999999999999999999999986

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=4.7e-28  Score=172.52  Aligned_cols=150  Identities=17%  Similarity=0.123  Sum_probs=106.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC----CCCeEECccccccccCCCCC-cccccCccccccccCccccccC-C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE----DHVAKLFDFSLAESIPDGET-HIKDAIPIGIMGFVATEYVTTG-D   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~----~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~~~~PE~~~~~-~   75 (163)
                      |++.||+|||   +.+++||||||+||+++.    ++.++++|||++........ ........++..|+|||.+.+. .
T Consensus       116 qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  192 (316)
T cd07842         116 QILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARH  192 (316)
T ss_pred             HHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCC
Confidence            7899999999   899999999999999999    99999999999876644332 1112233567889999988764 5


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchh------------hccc--------------------hh--hhhhhccc-
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFD------------EIVD--------------------PV--IREELCIQ-  120 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~------------~~~~--------------------~~--~~~~~~~~-  120 (163)
                      ++.++|+||+|+++++++++..|+.......            +++.                    ..  ........ 
T Consensus       193 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (316)
T cd07842         193 YTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS  272 (316)
T ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC
Confidence            7889999999999999999987765322111            0000                    00  00000000 


Q ss_pred             chh----hH--HHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          121 SSE----KD--KQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       121 ~~~----~~--~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...    ..  ..+.++.+++.+||+.+|++|||+.++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         273 NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            000    00  23457899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.94  E-value=9.5e-28  Score=165.97  Aligned_cols=148  Identities=24%  Similarity=0.284  Sum_probs=114.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+|++|+||+++.++.++++|||.+................++..|++||...+...+.++|
T Consensus       109 ~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~D  185 (260)
T cd06606         109 QILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAAD  185 (260)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhh
Confidence            6889999999   8999999999999999999999999999987776554321122345778899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+..................  ........+..+.+++.+|+..+|++||++.+++.
T Consensus       186 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         186 IWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE--PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCC--CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            999999999999988887654422222222221111  11122234688999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.94  E-value=5.9e-28  Score=173.75  Aligned_cols=149  Identities=17%  Similarity=0.192  Sum_probs=108.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++++|||++.........  .....++..|+|||.+.+ ..++.++
T Consensus       116 qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  190 (337)
T cd07858         116 QLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDF--MTEYVVTRWYRAPELLLNCSEYTTAI  190 (337)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccc--ccccccccCccChHHHhcCCCCCCcc
Confidence            7899999999   899999999999999999999999999999766443211  123357788999998765 4588999


Q ss_pred             ceeecchhhHHHhhhccccccccchhh--------------c----cchhhhh---hh----ccc-chhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDE--------------I----VDPVIRE---EL----CIQ-SSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~--------------~----~~~~~~~---~~----~~~-~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..|+........              .    .......   ..    ... .......+..+.++
T Consensus       191 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  270 (337)
T cd07858         191 DVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDL  270 (337)
T ss_pred             cHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHH
Confidence            999999999999998877643221100              0    0000000   00    000 00112356788999


Q ss_pred             HHhccccCcCCCCCHHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +.+||+.+|++|||+.++++.
T Consensus       271 i~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         271 LEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             HHHHhcCChhhccCHHHHHcC
Confidence            999999999999999999874

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.94  E-value=9.2e-28  Score=170.51  Aligned_cols=149  Identities=15%  Similarity=0.167  Sum_probs=105.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCccccccCC-CCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGD-YNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~-~~~   78 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++.........  .......++..|+|||.+.+.. ++.
T Consensus       127 qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  203 (310)
T cd07865         127 MLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGP  203 (310)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCc
Confidence            7899999999   899999999999999999999999999999765433221  1112235677899999886643 688


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhh-------------------hhhcccchh---------hHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-------------------EELCIQSSE---------KDKQVQA  130 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~---------~~~~~~~  130 (163)
                      ++|+||+|+++++++++..++....... .......                   .........         ....+..
T Consensus       204 ~~Di~slG~~l~el~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  282 (310)
T cd07865         204 PIDMWGAGCIMAEMWTRSPIMQGNTEQH-QLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPH  282 (310)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHH
Confidence            9999999999999999876654332211 1000000                   000000000         0012356


Q ss_pred             HHHHHHhccccCcCCCCCHHHHHH
Q 043958          131 FVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       131 ~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+++.+||..+|++|||++++++
T Consensus       283 ~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         283 ALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             HHHHHHHHhcCChhhccCHHHHhc
Confidence            789999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.94  E-value=1.1e-27  Score=168.91  Aligned_cols=140  Identities=19%  Similarity=0.262  Sum_probs=109.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||+|.||+++.++.++++|||++.......     ....++..|++||.+.+...+.++|
T Consensus       109 qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~D  180 (290)
T cd05580         109 QVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRT-----YTLCGTPEYLAPEIILSKGYGKAVD  180 (290)
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCC-----CCCCCCccccChhhhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999987665431     1335778899999998888889999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|+++++++++..|+.... ..+............    ....+..+++++.+||..+|.+|+     ++.++++
T Consensus       181 i~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         181 WWALGILIYEMLAGYPPFFDDN-PIQIYEKILEGKVRF----PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhcCCccC----CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            9999999999999988765433 222333333222211    122367899999999999999999     6666653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=1e-27  Score=169.36  Aligned_cols=147  Identities=16%  Similarity=0.178  Sum_probs=107.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+.. ++.++
T Consensus       114 qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  188 (293)
T cd07843         114 QLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPY--TQLVVTLWYRAPELLLGAKEYSTAI  188 (293)
T ss_pred             HHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCcccc--ccccccccccCchhhcCCccccchh
Confidence            7899999999   8999999999999999999999999999987665442211  1234677899999887644 68899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh--------------------------hhcccchhhHH--HHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE--------------------------ELCIQSSEKDK--QVQAFV  132 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~--~~~~~~  132 (163)
                      |+||+|+++++++++..++....... ........                          ...........  .+..+.
T Consensus       189 Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (293)
T cd07843         189 DMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGF  267 (293)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHH
Confidence            99999999999999977664332211 11110000                          00000000011  367789


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+||+.+|++|||+.+++.
T Consensus       268 ~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         268 DLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHHHHHhccCccccCCHHHHhc
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.94  E-value=5.8e-28  Score=173.47  Aligned_cols=149  Identities=17%  Similarity=0.206  Sum_probs=107.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCcccccc-CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTT-GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~-~~~~~   78 (163)
                      |++.||.|||   ..+++||||||+||+++.++.++|+|||++.........  .......++..|+|||.+.+ ..++.
T Consensus       113 qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~  189 (332)
T cd07857         113 QILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTK  189 (332)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCc
Confidence            7899999999   899999999999999999999999999999765433221  11123467889999998765 45788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhh---------------h----------hhc-cc-chhhHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR---------------E----------ELC-IQ-SSEKDKQVQAF  131 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------------~----------~~~-~~-~~~~~~~~~~~  131 (163)
                      ++|+||+|+++++++++..|+...... ..+.....               .          ... .. .......+..+
T Consensus       190 ~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (332)
T cd07857         190 AIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLA  268 (332)
T ss_pred             HHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHH
Confidence            999999999999999887665432211 11110000               0          000 00 00011235689


Q ss_pred             HHHHHhccccCcCCCCCHHHHHH
Q 043958          132 VELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+++.+|++.+|++|||+.+++.
T Consensus       269 ~~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         269 LDLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHHHHccCCcccCCCHHHHhc
Confidence            99999999999999999999875

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-27  Score=173.60  Aligned_cols=142  Identities=17%  Similarity=0.327  Sum_probs=119.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee-CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc-c
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE-K   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~-~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~-~   79 (163)
                      ||+.|+.|+|   ...++|||+||+|+.+ .+-|.+|+.|||++..+..+....   +.-|++.|-|||++.+..|+. +
T Consensus       126 QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~---TsCGSLAYSAPEILLGDsYDAPA  199 (864)
T KOG4717|consen  126 QIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLT---TSCGSLAYSAPEILLGDSYDAPA  199 (864)
T ss_pred             HHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhh---cccchhhccCchhhhcCccCCcc
Confidence            8999999999   8999999999999765 788999999999997776655444   346899999999999999976 7


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .||||+|+++|.+++|+.||...+. .+.+..++..++..    +...+.++++||..||..||.+|.+.++|..
T Consensus       200 VDiWSLGVILyMLVCGq~PFqeAND-SETLTmImDCKYtv----PshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  200 VDIWSLGVILYMLVCGQPPFQEAND-SETLTMIMDCKYTV----PSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             hhhhHHHHHHHHHHhCCCccccccc-hhhhhhhhcccccC----chhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            9999999999999999888875543 44555566655433    4456789999999999999999999999875

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=8.9e-28  Score=173.15  Aligned_cols=148  Identities=18%  Similarity=0.223  Sum_probs=108.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   ..+++||||||+||+++.++.++++|||++........     ...++..|+|||.+.+ ..++.++
T Consensus       125 qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  196 (342)
T cd07879         125 QMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVTRWYRAPEVILNWMHYNQTV  196 (342)
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCC-----CceeeecccChhhhcCccccCchH
Confidence            7899999999   89999999999999999999999999999865432211     2346778999998876 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh------------------h-----hc-ccch---hhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE------------------E-----LC-IQSS---EKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~-----~~-~~~~---~~~~~~~~~~~  133 (163)
                      |+||+|++++++++|..||........+ ......                  .     .. ....   .....+..+.+
T Consensus       197 Dv~slGvil~el~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (342)
T cd07879         197 DIWSVGCIMAEMLTGKTLFKGKDYLDQL-TQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVD  275 (342)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHH
Confidence            9999999999999998887643322211 111100                  0     00 0000   01123467889


Q ss_pred             HHHhccccCcCCCCCHHHHHH--HHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK--QLRQ  158 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~--~L~~  158 (163)
                      ++.+||+.||++||++.+++.  +++.
T Consensus       276 li~~~l~~dP~~R~~~~e~l~h~~f~~  302 (342)
T cd07879         276 LLEKMLELDVDKRLTATEALEHPYFDS  302 (342)
T ss_pred             HHHHHcCCChhhCcCHHHHhcCcchhh
Confidence            999999999999999999985  3544

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.94  E-value=1.7e-27  Score=170.82  Aligned_cols=155  Identities=19%  Similarity=0.263  Sum_probs=107.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-----cccCccccccccCccccccC--
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTTG--   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~--   74 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++||+.+..........     ......++..|++||.+.+.  
T Consensus       109 qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (328)
T cd08226         109 GALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLY  185 (328)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCC
Confidence            7899999999   8999999999999999999999999998654332211110     01111245569999998764  


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhh---------------------------------------
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE---------------------------------------  115 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------  115 (163)
                      .++.++|+||+|+++++++++..|+................                                       
T Consensus       186 ~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (328)
T cd08226         186 GYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQ  265 (328)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccc
Confidence            47889999999999999999988765432211111100000                                       


Q ss_pred             ---hhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH--HHHHH
Q 043958          116 ---ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK--QLRQA  159 (163)
Q Consensus       116 ---~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~--~L~~~  159 (163)
                         ......+....++..+.+++.+||..||++|||+.++++  +++.+
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         266 TMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             ccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence               000111223346778999999999999999999999975  44443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.94  E-value=1.3e-27  Score=171.45  Aligned_cols=154  Identities=20%  Similarity=0.182  Sum_probs=112.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++......... .......++..|+|||.+.+. .++.+
T Consensus       111 ~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  187 (330)
T cd07834         111 QILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKA  187 (330)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcc
Confidence            7899999999   899999999999999999999999999999776554311 111233577889999999887 78899


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhh----------------------ccc-----chhhHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL----------------------CIQ-----SSEKDKQVQAFV  132 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~-----~~~~~~~~~~~~  132 (163)
                      +|+||+|+++++++++..|+....... ....+.....                      ...     .......+..+.
T Consensus       188 sDi~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (330)
T cd07834         188 IDIWSVGCIFAELLTRKPLFPGRDYID-QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAI  266 (330)
T ss_pred             hhHHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHH
Confidence            999999999999999987765433211 1111110000                      000     000112457789


Q ss_pred             HHHHhccccCcCCCCCHHHHHH--HHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK--QLRQA  159 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~--~L~~~  159 (163)
                      +++.+||+.+|++|||+.+++.  ++++.
T Consensus       267 ~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  295 (330)
T cd07834         267 DLLEKMLVFDPKKRITADEALAHPYLAQL  295 (330)
T ss_pred             HHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence            9999999999999999999987  35543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=9.1e-28  Score=168.87  Aligned_cols=147  Identities=18%  Similarity=0.300  Sum_probs=106.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+|++|+||+++.++.++++|||++..........  ....++..|++||.+.+. .++.++
T Consensus       108 ~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~~  182 (286)
T cd07846         108 QILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY--TDYVATRWYRAPELLVGDTKYGRAV  182 (286)
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc--CcccceeeccCcHHhccccccCchH
Confidence            7899999999   8999999999999999999999999999987654433221  123577889999988753 467899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh-------------------hhhccc--------chhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-------------------EELCIQ--------SSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~--------~~~~~~~~~~~~~  133 (163)
                      |+||+|++++++++|..++........ ......                   ......        .......+..+.+
T Consensus       183 Dv~slG~~l~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (286)
T cd07846         183 DIWAVGCLVTEMLTGEPLFPGDSDIDQ-LYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLD  261 (286)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCchHHH-HHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHH
Confidence            999999999999999766543222111 000000                   000000        0001234577999


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+||+.+|++||++.++++
T Consensus       262 li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         262 LAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHHHhcCCcccchhHHHHhc
Confidence            999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.94  E-value=5.1e-27  Score=188.33  Aligned_cols=154  Identities=25%  Similarity=0.271  Sum_probs=112.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||..++++++|||+||+||+++.++..++. |+........      ....++..|+|||++.+..++.++|
T Consensus       788 ~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~------~~~~~t~~y~aPE~~~~~~~~~~sD  860 (968)
T PLN00113        788 GIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD------TKCFISSAYVAPETRETKDITEKSD  860 (968)
T ss_pred             HHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC------CCccccccccCcccccCCCCCcccc
Confidence            78999999996556799999999999999998888774 5554332211      1225778999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchh-hccc------------hhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFD-EIVD------------PVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~-~~~~------------~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      |||+|+++||++++..|+....... .+..            ...................++.+++.+||+.+|++|||
T Consensus       861 v~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt  940 (968)
T PLN00113        861 IYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPC  940 (968)
T ss_pred             hhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcC
Confidence            9999999999999998864221110 0000            00000000111223355667889999999999999999


Q ss_pred             HHHHHHHHHHHhhc
Q 043958          149 MIDVAKQLRQAYRF  162 (163)
Q Consensus       149 ~~~i~~~L~~~~~~  162 (163)
                      +.++++.|+++.+.
T Consensus       941 ~~evl~~L~~~~~~  954 (968)
T PLN00113        941 ANDVLKTLESASRS  954 (968)
T ss_pred             HHHHHHHHHHhhcc
Confidence            99999999998663

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=9.2e-28  Score=168.37  Aligned_cols=143  Identities=20%  Similarity=0.269  Sum_probs=107.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   ..+++|+||+|+||+++.++.++++|||.+.........   ....++..|++||.+.++.++.++|
T Consensus       103 ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~D  176 (277)
T cd05577         103 QIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKI---KGRAGTPGYMAPEVLQGEVYDFSVD  176 (277)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcc---ccccCCCCcCCHHHhcCCCCCchhh
Confidence            7899999999   899999999999999999999999999998665432211   1234677899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccc---hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~  153 (163)
                      +||+|+++++++++..|+.....   ...+.......    ........++.+.+++.+||+.+|++||     ++.+++
T Consensus       177 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll  252 (277)
T cd05577         177 WFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEM----AVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR  252 (277)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccc----cccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence            99999999999999888754322   11111111111    1112223467899999999999999999     666665


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      .
T Consensus       253 ~  253 (277)
T cd05577         253 E  253 (277)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.94  E-value=7.1e-28  Score=169.66  Aligned_cols=153  Identities=18%  Similarity=0.183  Sum_probs=126.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.|++|||   ..+++|.||.+.|+++++.-.+|++|-.+++..-.......+...-....||+||.+....|+.++|
T Consensus       404 Qla~am~hlh---~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasD  480 (563)
T KOG1024|consen  404 QLAMAMEHLH---NHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASD  480 (563)
T ss_pred             HHHHHHHHHH---hcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhh
Confidence            7899999999   9999999999999999999999999999998876666555443444667899999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||||+++||+++.+..|..+-...++..-... .+++  ..+.+|+.++..++.-||+..|++||++++++.-|.+..
T Consensus       481 vWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd-GyRl--aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  481 VWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD-GYRL--AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             hHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc-ccee--cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            999999999999977766655555554443333 3333  334568899999999999999999999999999887764

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=1.4e-27  Score=168.34  Aligned_cols=148  Identities=16%  Similarity=0.229  Sum_probs=104.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+ ..++.++
T Consensus       111 ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  185 (291)
T cd07844         111 QLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY--SNEVVTLWYRPPDVLLGSTEYSTSL  185 (291)
T ss_pred             HHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc--cccccccccCCcHHhhcCcccCcHH
Confidence            7899999999   8999999999999999999999999999986543221111  12235678999998875 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh-------h------------hhccc----ch---hhHHH--HHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-------E------------ELCIQ----SS---EKDKQ--VQAFV  132 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------~------------~~~~~----~~---~~~~~--~~~~~  132 (163)
                      |+||+|+++++++++..++.......+.+.....       .            .....    ..   .....  ...+.
T Consensus       186 Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (291)
T cd07844         186 DMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGE  265 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHH
Confidence            9999999999999998776543311111110000       0            00000    00   00011  26778


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+|+..+|++|||+.+++.
T Consensus       266 ~li~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         266 ELALKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHHHHhccCcccccCHHHHhc
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.94  E-value=2.2e-27  Score=164.27  Aligned_cols=142  Identities=15%  Similarity=0.197  Sum_probs=112.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||+|.||+++.++.++++|||++.........    ...++..|++||.+.+..++.++|
T Consensus       111 ~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~----~~~~~~~~~~Pe~~~~~~~~~~~D  183 (256)
T cd08530         111 QLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAK----TQIGTPHYMAPEVWKGRPYSYKSD  183 (256)
T ss_pred             HHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcc----cccCCccccCHHHHCCCCCCchhh
Confidence            7899999999   899999999999999999999999999998776554211    234778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+... ...++..........   ......+..+.+++.+|+..+|++||++.++++
T Consensus       184 ~~slG~~~~~l~~g~~p~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         184 IWSLGCLLYEMATFAPPFEAR-SMQDLRYKVQRGKYP---PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCCC---CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            999999999999988776433 333333333222211   122356788999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.94  E-value=7.2e-28  Score=167.31  Aligned_cols=150  Identities=21%  Similarity=0.245  Sum_probs=111.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc------ccccCccccccccCccccccCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH------IKDAIPIGIMGFVATEYVTTGD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~PE~~~~~~   75 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++.........      .......++..|++||......
T Consensus       101 qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  177 (265)
T cd05579         101 EIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG  177 (265)
T ss_pred             HHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCC
Confidence            7899999999   899999999999999999999999999998655433221      1112335677899999998888


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      .+.++|+||+|+++++++++..|+... ...+..........  ..+.....+..+.+++.+||+.+|++|||+.++.+.
T Consensus       178 ~~~~~Dv~slG~~~~~l~~g~~p~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~  254 (265)
T cd05579         178 HSKTVDWWSLGCILYEFLVGIPPFHGE-TPEEIFQNILNGKI--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEI  254 (265)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHhcCCc--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHH
Confidence            889999999999999999998876533 33333333332221  112221236789999999999999999999555444


Q ss_pred             HH
Q 043958          156 LR  157 (163)
Q Consensus       156 L~  157 (163)
                      |+
T Consensus       255 l~  256 (265)
T cd05579         255 KN  256 (265)
T ss_pred             hc
Confidence            43

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.94  E-value=4.5e-28  Score=157.78  Aligned_cols=110  Identities=22%  Similarity=0.281  Sum_probs=91.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc----CCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT----GDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~----~~~~   77 (163)
                      .+..||.|||+  ...++|||+||+|||++.+|.+|+||||++....++-....   ..|+..|||||.+..    ..|+
T Consensus       156 Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~---daGCkpYmaPEri~~e~n~~gY~  230 (282)
T KOG0984|consen  156 SVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTM---DAGCKPYMAPERINPELNQKGYS  230 (282)
T ss_pred             HHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHH---hcCCCccCChhhcCcccCcccce
Confidence            57789999997  67999999999999999999999999999977765543332   258889999998853    3589


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhh
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE  116 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  116 (163)
                      .++||||+|+++.|+.++..||.......+.+.++....
T Consensus       231 vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep  269 (282)
T KOG0984|consen  231 VKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEP  269 (282)
T ss_pred             eehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCC
Confidence            999999999999999999999987776666666665543

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.94  E-value=1.2e-27  Score=170.03  Aligned_cols=149  Identities=18%  Similarity=0.206  Sum_probs=105.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc---------ccCccccccccCccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK---------DAIPIGIMGFVATEYVT   72 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~~~~PE~~~   72 (163)
                      |+++||+|||   +.+++|+|+||+||+++.++.++++|||++...........         .....++..|+|||.+.
T Consensus       123 ~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  199 (311)
T cd07866         123 QLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLL  199 (311)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhh
Confidence            7899999999   89999999999999999999999999999876543221111         11234677899999876


Q ss_pred             cC-CCCcccceeecchhhHHHhhhccccccccchhhccchhhh-------------------------hhhcc-cchhhH
Q 043958           73 TG-DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-------------------------EELCI-QSSEKD  125 (163)
Q Consensus        73 ~~-~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~-~~~~~~  125 (163)
                      +. .++.++|+||+|++++++++|..++........ ......                         ..... ......
T Consensus       200 ~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (311)
T cd07866         200 GERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQ-LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFG  278 (311)
T ss_pred             CCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcc
Confidence            54 478899999999999999999776543222110 000000                         00000 000011


Q ss_pred             HHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          126 KQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       126 ~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...+.+.+++.+||..+|++|||+.+++.
T Consensus       279 ~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         279 KLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             cCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            23367889999999999999999998875

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.94  E-value=1.5e-27  Score=168.51  Aligned_cols=148  Identities=18%  Similarity=0.194  Sum_probs=105.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      ||+.||+|||   +++++|+||+|+||+++. ++.++++|||++..........  ....++..|+|||.+.+. .++.+
T Consensus       110 qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~  184 (294)
T PLN00009        110 QILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTF--THEVVTLWYRAPEILLGSRHYSTP  184 (294)
T ss_pred             HHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcccc--ccCceeecccCHHHHhCCCCCCcH
Confidence            7899999999   899999999999999985 5578999999997654322111  123467889999988664 57889


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhh-------------------h---hhcccc--hhhHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-------------------E---ELCIQS--SEKDKQVQAFVELA  135 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------------~---~~~~~~--~~~~~~~~~~~~li  135 (163)
                      +|+||+|+++++++++..|+...............                   .   ......  ......++.+.+++
T Consensus       185 ~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  264 (294)
T PLN00009        185 VDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLL  264 (294)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHH
Confidence            99999999999999997776543332221110000                   0   000000  00112456789999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+|++.+|++||++.++++
T Consensus       265 ~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        265 SKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHHccCChhhCcCHHHHhc
Confidence            9999999999999999886

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=1.1e-26  Score=163.20  Aligned_cols=147  Identities=16%  Similarity=0.173  Sum_probs=106.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.+|.|||   +.+++|+||+|+||+++.++.++++|||++..........   ...++..|+|||.+.+ ..++.++
T Consensus       107 ~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~---~~~~~~~~~aPE~~~~~~~~~~~~  180 (283)
T cd07830         107 QILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYT---DYVSTRWYRAPEILLRSTSYSSPV  180 (283)
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcC---CCCCcccccCceeeecCcCcCCcc
Confidence            7899999999   8999999999999999999999999999987654432211   2346778999998754 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchh--------------------hhhhhccc-----chhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPV--------------------IREELCIQ-----SSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~-----~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..++.............                    ........     .......+..+.+++
T Consensus       181 Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  260 (283)
T cd07830         181 DIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLI  260 (283)
T ss_pred             chhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHH
Confidence            99999999999999976664333222111000                    00000000     000011246799999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||..+|++|||+.+++.
T Consensus       261 ~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         261 KDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             HHhcccCcccCCCHHHHhh
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.94  E-value=1.5e-27  Score=168.07  Aligned_cols=149  Identities=20%  Similarity=0.239  Sum_probs=111.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC--CCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~   79 (163)
                      |++.||.|||   ..+++|+||+|.||+++.++.++++|||++........... ....++..|++||.+.+..  .+.+
T Consensus       113 ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~  188 (288)
T cd05583         113 EIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERA-YSFCGTIEYMAPEVIRGGSGGHDKA  188 (288)
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECcccccccccccccc-ccccCCccccCHHHhcCCCCCCcch
Confidence            7899999999   89999999999999999999999999999876544322211 1234778999999987654  6789


Q ss_pred             cceeecchhhHHHhhhccccccccc---hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +|+||+|+++++++++..|+.....   ..++........    .......+..+.+++.+||+.+|++|||+.++.+.|
T Consensus       189 ~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l  264 (288)
T cd05583         189 VDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIK  264 (288)
T ss_pred             hhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHh
Confidence            9999999999999998888643221   111111111111    112223456789999999999999999988887766


Q ss_pred             HH
Q 043958          157 RQ  158 (163)
Q Consensus       157 ~~  158 (163)
                      +.
T Consensus       265 ~~  266 (288)
T cd05583         265 NH  266 (288)
T ss_pred             cC
Confidence            54

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.94  E-value=2.5e-27  Score=166.52  Aligned_cols=148  Identities=18%  Similarity=0.202  Sum_probs=107.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   ..+++|+||+|+||+++.++.++++|||++............ ...++..|+|||.+.+. .++.++
T Consensus       108 ~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~~  183 (287)
T cd07840         108 QLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYT-NRVITLWYRPPELLLGATRYGPEV  183 (287)
T ss_pred             HHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccc-ccccccccCCceeeEccccCChHH
Confidence            7899999999   899999999999999999999999999998766544321111 23466789999987653 578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh-------------------hhcccch-------hhHH-HHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------ELCIQSS-------EKDK-QVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~-------~~~~-~~~~~~~  133 (163)
                      |+||+|+++++++++..|+....... .+......                   .......       .... ++..+.+
T Consensus       184 Dv~slG~~l~el~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (287)
T cd07840         184 DMWSVGCILAELFLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALD  262 (287)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHH
Confidence            99999999999999987765433211 11111000                   0000000       0011 2678899


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+||..+|++||++.++++
T Consensus       263 ~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         263 LLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHHcCCChhhCcCHHHHhh
Confidence            999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.94  E-value=1.8e-27  Score=165.11  Aligned_cols=142  Identities=21%  Similarity=0.249  Sum_probs=109.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |+++||.|||   ..+++|+||+|+||+++.++.++++|||++.........   ....++..|++||.+.+..++.++|
T Consensus       108 ~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~y~~PE~~~~~~~~~~~D  181 (258)
T cd05578         108 EIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLT---TSTSGTPGYMAPEVLCRQGYSVAVD  181 (258)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccc---cccCCChhhcCHHHHcccCCCCccc
Confidence            7899999999   899999999999999999999999999998765443211   1235778899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccc--hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH--HHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT--FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM--IDVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~--~~i~  153 (163)
                      +||+|+++++++++..|+.....  ...+.......    ........+..+.+++.+||..+|.+||++  .+++
T Consensus       182 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         182 WWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETA----DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             chhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccc----cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            99999999999999888764332  22222221111    112223456889999999999999999999  5554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.94  E-value=2.5e-27  Score=163.92  Aligned_cols=144  Identities=19%  Similarity=0.306  Sum_probs=111.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+|++|+||+++.++.++++|||++.........  .....++..|+|||...+..++.++|
T Consensus       111 ~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~D  185 (258)
T cd08215         111 QLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDL--AKTVVGTPYYLSPELCQNKPYNYKSD  185 (258)
T ss_pred             HHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCcce--ecceeeeecccChhHhccCCCCcccc
Confidence            6899999999   899999999999999999999999999998765444311  12335778899999988888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.... ..++..........   ......+..+.+++.+||..+|++|||+.++++
T Consensus       186 v~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         186 IWSLGCVLYELCTLKHPFEGEN-LLELALKILKGQYP---PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCc-HHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            9999999999998877764332 33333332222211   112245678999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.4e-27  Score=162.51  Aligned_cols=144  Identities=22%  Similarity=0.349  Sum_probs=111.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||+|.||+++.++.++++|||.+..........  ....++..|++||...+..++.++|
T Consensus       107 ~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~y~~pe~~~~~~~~~~~D  181 (254)
T cd06627         107 QVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDD--ASVVGTPYWMAPEVIEMSGASTASD  181 (254)
T ss_pred             HHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccc--cccccchhhcCHhhhcCCCCCcchh
Confidence            7889999999   8999999999999999999999999999997765443321  1335778899999988777889999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+............ ....   ........+..+.+++.+||..+|++|||+.+++.
T Consensus       182 v~~lG~~l~~l~~g~~p~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         182 IWSLGCTVIELLTGNPPYYDLNPMAALFRI-VQDD---HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHHHHHHhCCCCCCCccHHHHHHHH-hccC---CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            999999999999998776543322222111 1111   11122234678999999999999999999999874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.94  E-value=3.2e-27  Score=167.33  Aligned_cols=148  Identities=18%  Similarity=0.184  Sum_probs=106.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++........... ....++..|++||.+.+. .++.++
T Consensus       124 qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~y~~PE~~~~~~~~~~~~  199 (302)
T cd07864         124 QLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPY-TNKVITLWYRPPELLLGEERYGPAI  199 (302)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCccccc-ccceeccCccChHHhcCCCCCCchh
Confidence            7899999999   89999999999999999999999999999876654332111 122356789999987653 468899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh---hhhc-----------------------ccchhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR---EELC-----------------------IQSSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..++........+ ..+..   ....                       .........+..+.++
T Consensus       200 Di~slG~~~~el~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  278 (302)
T cd07864         200 DVWSCGCILGELFTKKPIFQANQELAQL-ELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDL  278 (302)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHH
Confidence            9999999999999987666533322111 00000   0000                       0000111245789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.+|++||++.+++.
T Consensus       279 i~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         279 LDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHHccCChhhCCCHHHHhc
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.94  E-value=3.7e-27  Score=163.31  Aligned_cols=144  Identities=22%  Similarity=0.295  Sum_probs=109.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC-eEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +.+++|+|++|.||+++.++. ++++|||.+..........  ....++..|+|||...+..++.++
T Consensus       109 ~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~--~~~~~~~~~~ape~~~~~~~~~~~  183 (257)
T cd08225         109 QISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELA--YTCVGTPYYLSPEICQNRPYNNKT  183 (257)
T ss_pred             HHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccc--cccCCCccccCHHHHcCCCCCchh
Confidence            7889999999   899999999999999988864 6999999987665432221  123578889999998888899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+.... ..+..........   .......+..+.+++.+||..+|++|||+.++++
T Consensus       184 Dv~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         184 DIWSLGCVLYELCTLKHPFEGNN-LHQLVLKICQGYF---APISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHhcccC---CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            99999999999999988765332 2222222222211   1111234568999999999999999999999976

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.94  E-value=4e-27  Score=169.97  Aligned_cols=144  Identities=21%  Similarity=0.230  Sum_probs=106.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++.......     ....++..|+|||.+.+ ..++.++
T Consensus       128 qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  199 (345)
T cd07877         128 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTV  199 (345)
T ss_pred             HHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEecccccccccccc-----cccccCCCccCHHHHhCccCCCchh
Confidence            7899999999   8999999999999999999999999999986543321     12356788999998866 4578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhh------------------h------cccchh---hHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE------------------L------CIQSSE---KDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------~------~~~~~~---~~~~~~~~~~  133 (163)
                      |+||+|+++++++++..|+........ ........                  +      .+....   ....++.+.+
T Consensus       200 DvwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (345)
T cd07877         200 DIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVD  278 (345)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHH
Confidence            999999999999999877653322211 11110000                  0      000000   0013567899


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+|++.+|++||++.+++.
T Consensus       279 li~~~L~~dp~~R~t~~e~l~  299 (345)
T cd07877         279 LLEKMLVLDSDKRITAAQALA  299 (345)
T ss_pred             HHHHHcCCChhhcCCHHHHhc
Confidence            999999999999999999876

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.94  E-value=2.2e-27  Score=174.03  Aligned_cols=155  Identities=20%  Similarity=0.318  Sum_probs=119.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||++|++||.   +.+++|||+.+.|+|++.++++||+|||.++..-.+..........-...|||+|.+.-++++.++|
T Consensus       645 qiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSD  721 (807)
T KOG1094|consen  645 QIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASD  721 (807)
T ss_pred             HHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhh
Confidence            8999999999   9999999999999999999999999999998766555544443445667999999999999999999


Q ss_pred             eeecchhhHHHh--hhccccccccchhhccchh---hhhhh-cccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLL--NRVKKHIECNTFDEIVDPV---IREEL-CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~--~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +|+||+++||++  ++..||-. ...+++++..   ...+. ..-...+.-|+..+.+++..||+.+.++||+++++...
T Consensus       722 vWafgvTlwE~~~~C~e~Py~~-lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~  800 (807)
T KOG1094|consen  722 VWAFGVTLWEVFMLCREQPYSQ-LTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF  800 (807)
T ss_pred             hhhhHHHHHHHHHHHhhCchhh-hhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence            999999999976  45566542 2222222211   11110 01122344577889999999999999999999999999


Q ss_pred             HHHHh
Q 043958          156 LRQAY  160 (163)
Q Consensus       156 L~~~~  160 (163)
                      |++..
T Consensus       801 lq~~~  805 (807)
T KOG1094|consen  801 LQEDA  805 (807)
T ss_pred             HHHhc
Confidence            88753

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=7.2e-27  Score=163.87  Aligned_cols=147  Identities=18%  Similarity=0.191  Sum_probs=106.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  .....+..|+|||.+.+. .++.++
T Consensus       106 ~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~aPE~~~~~~~~~~~~  180 (282)
T cd07829         106 QLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTY--THEVVTLWYRAPEILLGSKHYSTAV  180 (282)
T ss_pred             HHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcccc--CccccCcCcCChHHhcCCcCCCccc
Confidence            6889999999   8999999999999999999999999999987665433211  123456789999998766 688899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhh-----------------------hhhc--ccchhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR-----------------------EELC--IQSSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~--~~~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..++....... .+..+..                       ....  .........+..+.+++
T Consensus       181 Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  259 (282)
T cd07829         181 DIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLL  259 (282)
T ss_pred             cHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHH
Confidence            99999999999999966654332211 1111000                       0000  00000112256799999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||..+|++||++.+++.
T Consensus       260 ~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         260 SKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             HHhhccCcccCCCHHHHhh
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5e-27  Score=163.54  Aligned_cols=146  Identities=22%  Similarity=0.242  Sum_probs=110.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||+++........ .......++..|+|||.+.+..++.++
T Consensus       114 ~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  190 (264)
T cd06653         114 QILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKA  190 (264)
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccc
Confidence            7899999999   899999999999999999999999999999765432111 111133578889999999888889999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+........+.+ .....  .....+...+..+.+++.+||. +|..||++.+++.
T Consensus       191 Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~--~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         191 DVWSVACTVVEMLTEKPPWAEYEAMAAIFK-IATQP--TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             cHHHHHHHHHHHHhCCCCCCccCHHHHHHH-HHcCC--CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence            999999999999999888754433333322 22111  1122233466789999999999 5799999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=1.8e-27  Score=171.55  Aligned_cols=150  Identities=13%  Similarity=0.170  Sum_probs=105.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCccc-ccCccccccccCcccccc-CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTT-GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~-~~~~~   78 (163)
                      |++.||.|||   ..+++||||||+||+++ .++.++++|||.+........... .....++..|+|||.+.+ ..++.
T Consensus       122 qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  198 (342)
T cd07854         122 QLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTK  198 (342)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCc
Confidence            7899999999   89999999999999997 456789999999876543221111 112346778999998754 45788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchh---------------------hh-hhhcccch---hhHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPV---------------------IR-EELCIQSS---EKDKQVQAFVE  133 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~-~~~~~~~~---~~~~~~~~~~~  133 (163)
                      ++|+||+|+++++++++..|+.............                     .. .......+   .....+.++.+
T Consensus       199 ~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (342)
T cd07854         199 AIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALD  278 (342)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHH
Confidence            9999999999999999998875443222111000                     00 00000000   01123467889


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+||..||++|||+.+++.
T Consensus       279 li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         279 FLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHHHHhCCCchhccCHHHHhC
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.94  E-value=2.5e-27  Score=162.60  Aligned_cols=150  Identities=17%  Similarity=0.153  Sum_probs=108.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC----CCeEECccccccccCCCC-CcccccCccccccccCccccccC-C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESIPDGE-THIKDAIPIGIMGFVATEYVTTG-D   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~----~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~~~~PE~~~~~-~   75 (163)
                      ||+.|+.|||   +.=++|||+||.|||+.-+    |.+||+|||+++.+.+.- ........+-|.+|.|||.+.+. .
T Consensus       140 Qil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~h  216 (438)
T KOG0666|consen  140 QILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARH  216 (438)
T ss_pred             HHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhccccc
Confidence            8999999999   8889999999999999766    899999999998876543 22233355788999999999875 4


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchh--------hccchhhh-------hhh--cccchhh--------------
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFD--------EIVDPVIR-------EEL--CIQSSEK--------------  124 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~--------~~~~~~~~-------~~~--~~~~~~~--------------  124 (163)
                      |+.+.|+|++||++.|+++..+.|...+..-        +.++++..       ...  ....++.              
T Consensus       217 YT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n  296 (438)
T KOG0666|consen  217 YTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDN  296 (438)
T ss_pred             ccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCc
Confidence            9999999999999999998876655422110        00111100       000  0000000              


Q ss_pred             ----------HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          125 ----------DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       125 ----------~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                                ...++...+|+.++|.+||-+|.|++++++
T Consensus       297 ~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAle  336 (438)
T KOG0666|consen  297 VSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALE  336 (438)
T ss_pred             chHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhc
Confidence                      001244788999999999999999999876

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.94  E-value=3.6e-27  Score=162.02  Aligned_cols=131  Identities=19%  Similarity=0.124  Sum_probs=100.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++++|||.+........     ...++..|++||.+.+..++.++|
T Consensus        93 ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~D  164 (237)
T cd05576          93 EMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCD-----GEAVENMYCAPEVGGISEETEACD  164 (237)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccccc-----cCCcCccccCCcccCCCCCCchhh
Confidence            7899999999   89999999999999999999999999998766543321     123456799999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|+++++++++..++.....  .. .....      .......+..+.+++.+|++.||++||++
T Consensus       165 vwslG~il~el~~g~~~~~~~~~--~~-~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         165 WWSLGAILFELLTGKTLVECHPS--GI-NTHTT------LNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHHHHHHHHHCcchhhcCch--hc-ccccc------cCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence            99999999999998765432111  00 00000      01112345779999999999999999996

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.94  E-value=2.9e-27  Score=170.58  Aligned_cols=144  Identities=21%  Similarity=0.246  Sum_probs=107.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++.......     ....++..|+|||.+.+. .++.++
T Consensus       126 ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07851         126 QILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTV  197 (343)
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEccccccccccccc-----cCCcccccccCHHHHhCCCCCCchH
Confidence            7899999999   8999999999999999999999999999987654331     123467789999988653 578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhh----------------------hc--cc---chhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE----------------------LC--IQ---SSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~--~~---~~~~~~~~~~~~~  133 (163)
                      |+||+|++++++++|..|+........ +..+....                      ..  ..   .......+..+.+
T Consensus       198 DvwslGv~l~elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~d  276 (343)
T cd07851         198 DIWSVGCIMAELLTGKTLFPGSDHIDQ-LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAID  276 (343)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHH
Confidence            999999999999999887754433221 11110000                      00  00   0001123678999


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+||+.+|++|||+.+++.
T Consensus       277 li~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         277 LLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             HHHHhCCCChhhCCCHHHHhc
Confidence            999999999999999999876

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.94  E-value=3.8e-27  Score=169.02  Aligned_cols=145  Identities=19%  Similarity=0.228  Sum_probs=106.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |+++||+|||   ..+++|+||+|+||+++.++.++++|||.+.......     ....++..|++||.+.+ ..++.++
T Consensus       116 ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~  187 (328)
T cd07856         116 QILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQM-----TGYVSTRYYRAPEIMLTWQKYDVEV  187 (328)
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccccccCCCc-----CCCcccccccCceeeeccCCcCcHH
Confidence            7889999999   8999999999999999999999999999986543221     12346778999998766 4688999


Q ss_pred             ceeecchhhHHHhhhccccccccchh--------------hccchhhhh-------hhcc--cch---hhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFD--------------EIVDPVIRE-------ELCI--QSS---EKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~--------------~~~~~~~~~-------~~~~--~~~---~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..++.......              +........       ....  ..+   .....+..+.++
T Consensus       188 Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (328)
T cd07856         188 DIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDL  267 (328)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHH
Confidence            99999999999999977764332211              000000000       0000  000   011245789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.+|++|||+.+++.
T Consensus       268 i~~~l~~~P~~R~t~~ell~  287 (328)
T cd07856         268 LEKMLVFDPQKRISAAEALA  287 (328)
T ss_pred             HHHHcCCChhhCCCHHHHhc
Confidence            99999999999999999876

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=1.1e-26  Score=162.87  Aligned_cols=144  Identities=22%  Similarity=0.351  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.|+.|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|++||.+.+..++.++|
T Consensus       109 ~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~D  183 (277)
T cd06641         109 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDSKAD  183 (277)
T ss_pred             HHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhh--ccccCCccccChhhhccCCCCchhh
Confidence            6889999999   8999999999999999999999999999987654332111  1235777899999998888899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+..... ......+....   ........+..+.+++.+||..+|++||++.++++
T Consensus       184 v~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         184 IWSLGITAIELAKGEPPHSELHP-MKVLFLIPKNN---PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHHHcCCCCCCccch-HHHHHHHhcCC---CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            99999999999999877643221 21222111111   11112235677999999999999999999999998

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=2.7e-27  Score=160.38  Aligned_cols=151  Identities=20%  Similarity=0.271  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      ||+.||+|||   +.+|+||||||.|.|++.|-.+||+|||+++..........+ ...-|.+|.+||++.+. .|+.+.
T Consensus       164 QILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMT-qEVVTQYYRAPEiLMGaRhYs~Av  239 (449)
T KOG0664|consen  164 QILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMT-HEVVTQYYRAPELLMGARRYTGAV  239 (449)
T ss_pred             HHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccchhhhhhhH-HHHHHHHhccHHHhhcchhhcCcc
Confidence            8999999999   899999999999999999999999999999877655444333 23467789999999874 599999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccc----------------------hhhhhhhcccc-------hhhHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVD----------------------PVIREELCIQS-------SEKDKQVQAF  131 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~-------~~~~~~~~~~  131 (163)
                      ||||+||++.|++.+.-.|....+.+.+--                      .+++.....+.       ........+.
T Consensus       240 DiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~hea  319 (449)
T KOG0664|consen  240 DIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEA  319 (449)
T ss_pred             ceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHH
Confidence            999999999999887766654444332110                      00111000000       0000122346


Q ss_pred             HHHHHhccccCcCCCCCHHHHHHHH
Q 043958          132 VELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      ..+..+++..||++|.+..+.+..+
T Consensus       320 v~~~~~~l~~d~dkris~~~A~~~~  344 (449)
T KOG0664|consen  320 VDLLQKLLHFDPDKRISVEEALQHR  344 (449)
T ss_pred             HHHHHHHhCCCCcccccHhhhcccc
Confidence            6788889999999999988877643

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.93  E-value=7.3e-27  Score=164.11  Aligned_cols=147  Identities=14%  Similarity=0.160  Sum_probs=106.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||++..........  ....++..|++||.+.+. .++.++
T Consensus       108 qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~y~~PE~~~~~~~~~~~~  182 (284)
T cd07836         108 QLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTF--SNEVVTLWYRAPDVLLGSRTYSTSI  182 (284)
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcccc--ccccccccccChHHhcCCCCCCcHH
Confidence            7899999999   8999999999999999999999999999986554322111  123467789999988654 468899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh--------------------hhccc-----chhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE--------------------ELCIQ-----SSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~-----~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..|+..... .+........                    .....     .......+..+.+++
T Consensus       183 Dv~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  261 (284)
T cd07836         183 DIWSVGCIMAEMITGRPLFPGTNN-EDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLL  261 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHH
Confidence            999999999999999877643322 1111111100                    00000     000123457789999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+|++.+|.+||++.++++
T Consensus       262 ~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         262 HRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHHhcCCcccCCCHHHHhc
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=1.3e-26  Score=163.70  Aligned_cols=146  Identities=22%  Similarity=0.278  Sum_probs=114.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCC-------------------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG-------------------------------   50 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~-------------------------------   50 (163)
                      +|+-||+|||   ..|||.||+||+|||+-++|.+.|+||.++......                               
T Consensus       187 Evl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~  263 (459)
T KOG0610|consen  187 EVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCL  263 (459)
T ss_pred             HHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchh
Confidence            5788999999   999999999999999999999999999997432100                               


Q ss_pred             -CCc----------------------ccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhh
Q 043958           51 -ETH----------------------IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDE  107 (163)
Q Consensus        51 -~~~----------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~  107 (163)
                       ...                      .....++||=.|+|||++.+..-+.++|.|+||+++|||++|.-||...+. .+
T Consensus       264 ~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~  342 (459)
T KOG0610|consen  264 SSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KE  342 (459)
T ss_pred             ccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hh
Confidence             000                      001245678889999999999999999999999999999999999876544 44


Q ss_pred             ccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC----HHHHH
Q 043958          108 IVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT----MIDVA  153 (163)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt----~~~i~  153 (163)
                      .+..++....  ..+.....+.++++||++.|.+||++|..    +.||.
T Consensus       343 Tl~NIv~~~l--~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  343 TLRNIVGQPL--KFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             hHHHHhcCCC--cCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence            4444555543  33344467789999999999999999987    55554

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=8.7e-27  Score=167.51  Aligned_cols=149  Identities=15%  Similarity=0.154  Sum_probs=106.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC------------cccccCccccccccCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------------HIKDAIPIGIMGFVATE   69 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~~~PE   69 (163)
                      |++.||+|||   +.+++|+||+|+||+++.++.++++|||.+........            ........++..|+|||
T Consensus       127 ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  203 (335)
T PTZ00024        127 QILNGLNVLH---KWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPE  203 (335)
T ss_pred             HHHHHHHHHH---hCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCCh
Confidence            7899999999   89999999999999999999999999999876542110            01111224567899999


Q ss_pred             ccccC-CCCcccceeecchhhHHHhhhccccccccchhhccchhhhh--h-----h------------cc--c---chhh
Q 043958           70 YVTTG-DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE--E-----L------------CI--Q---SSEK  124 (163)
Q Consensus        70 ~~~~~-~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~-----~------------~~--~---~~~~  124 (163)
                      .+.+. .++.++|+||+|+++++++++..|+........ +..+...  .     +            ..  .   ....
T Consensus       204 ~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (335)
T PTZ00024        204 LLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQ-LGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIF  282 (335)
T ss_pred             hcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhC
Confidence            98764 368899999999999999998776654432221 1111000  0     0            00  0   0001


Q ss_pred             HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          125 DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       125 ~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...+..+.+++.+||+.+|++|||+++++.
T Consensus       283 ~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        283 PNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             cCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            123567899999999999999999999986

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.9e-26  Score=159.14  Aligned_cols=140  Identities=22%  Similarity=0.275  Sum_probs=108.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||+|.||+++.++.++++|||.+.........  .....++..|++||...+...+.++|
T Consensus       101 qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~--~~~~~~~~~~~~Pe~~~~~~~~~~~D  175 (250)
T cd05123         101 EIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSR--TNTFCGTPEYLAPEVLLGKGYGKAVD  175 (250)
T ss_pred             HHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCc--ccCCcCCccccChHHhCCCCCCchhh
Confidence            7899999999   899999999999999999999999999998766443211  12335777899999998888889999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      +||+|+++++++++..|+.... ..+..........    ......+..+.+++++||..+|++||++.+
T Consensus       176 ~~slG~~~~~l~~g~~p~~~~~-~~~~~~~~~~~~~----~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         176 WWSLGVLLYEMLTGKPPFYAED-RKEIYEKILKDPL----RFPEFLSPEARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHhcCCC----CCCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence            9999999999999988875433 2333333333221    122223578899999999999999999943

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.93  E-value=1.8e-26  Score=160.36  Aligned_cols=143  Identities=15%  Similarity=0.248  Sum_probs=109.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+|++|+||+++. +.++++|||++..........  ....++..|++||...+..++.++|
T Consensus       114 ~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~D  187 (260)
T cd08222         114 QLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCDLA--TTFTGTPYYMSPEALKHQGYDSKSD  187 (260)
T ss_pred             HHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecCCCcccc--cCCCCCcCccCHHHHccCCCCchhh
Confidence            7899999999   899999999999999975 569999999987654332221  1234777899999988778889999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..++.... ............   ........+.++.+++.+||..+|++||++.++++
T Consensus       188 v~slG~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         188 IWSLGCILYEMCCLAHAFEGQN-FLSVVLRIVEGP---TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHHcCC---CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            9999999999999988764332 222222222221   11123356678999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=8.7e-27  Score=180.73  Aligned_cols=147  Identities=20%  Similarity=0.293  Sum_probs=120.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-----CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-----GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-----~~~   76 (163)
                      +|+.||.-||   +.|+|||||||+|||+|..|.+|++|||.+-.+...+.-... ..+|||-|++||++..     +.|
T Consensus       183 EiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~-~aVGTPDYISPEvLqs~~~~~g~y  258 (1317)
T KOG0612|consen  183 EIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSS-VAVGTPDYISPEVLQSQGDGKGEY  258 (1317)
T ss_pred             HHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEec-cccCCCCccCHHHHHhhcCCcccc
Confidence            5778999999   999999999999999999999999999999888865544433 4589999999999862     458


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC---HHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT---MIDVA  153 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt---~~~i~  153 (163)
                      ...+|-||+|+++|||++|..||+ .+..-+.+.+++.-+-.+.+|.....++++++||...+. +|+.|..   ++++.
T Consensus       259 G~ecDwWSlGV~~YEMlyG~TPFY-adslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik  336 (1317)
T KOG0612|consen  259 GRECDWWSLGVFMYEMLYGETPFY-ADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIK  336 (1317)
T ss_pred             CCccchhhhHHHHHHHHcCCCcch-HHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHH
Confidence            899999999999999999999987 445555666666555455556556688999999998874 7888876   77665


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      .
T Consensus       337 ~  337 (1317)
T KOG0612|consen  337 N  337 (1317)
T ss_pred             h
Confidence            4

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=1.4e-26  Score=163.23  Aligned_cols=145  Identities=21%  Similarity=0.273  Sum_probs=106.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC--CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG--DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~   79 (163)
                      |++.||.|||   +.+++|+||+|+||+++.++.++++|||++........... ....++..|++||.+.+.  .++.+
T Consensus       113 qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~  188 (290)
T cd05613         113 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERA-YSFCGTIEYMAPDIVRGGDGGHDKA  188 (290)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCccceeccccccccc-ccccCCcccCChhhccCCCCCCCcc
Confidence            7899999999   89999999999999999999999999999876543322211 134578889999998753  46788


Q ss_pred             cceeecchhhHHHhhhccccccccc---hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMID  151 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~  151 (163)
                      +|+||+|+++++++++..|+.....   ..++........    .+.....+..+.+++.+||+.+|++||     +.++
T Consensus       189 ~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~  264 (290)
T cd05613         189 VDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE----PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADE  264 (290)
T ss_pred             ccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccC----CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence            9999999999999999887643221   112222111111    111223567899999999999999997     5666


Q ss_pred             HHH
Q 043958          152 VAK  154 (163)
Q Consensus       152 i~~  154 (163)
                      ++.
T Consensus       265 l~~  267 (290)
T cd05613         265 IKK  267 (290)
T ss_pred             HHc
Confidence            654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.9e-26  Score=159.46  Aligned_cols=143  Identities=22%  Similarity=0.294  Sum_probs=117.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +|++||.|||   +++|+.||+|.+|.|++++|.+||.|||+++..........  ++-||+.|+|||.+....|..+.|
T Consensus       276 EIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~k--TFCGTPEYLAPEVleDnDYgraVD  350 (516)
T KOG0690|consen  276 EIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTK--TFCGTPEYLAPEVLEDNDYGRAVD  350 (516)
T ss_pred             HHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhcccccceec--cccCChhhcCchhhccccccceee
Confidence            6889999999   99999999999999999999999999999976554433322  457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC--CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP--TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp--t~~~i~~  154 (163)
                      -|.+|+++|||++|..||... ....++..++-....++    ...+++.+.|+.-.|.+||.+|.  ..+++.+
T Consensus       351 WWG~GVVMYEMmCGRLPFyn~-dh~kLFeLIl~ed~kFP----r~ls~eAktLLsGLL~kdP~kRLGgGpdDakE  420 (516)
T KOG0690|consen  351 WWGVGVVMYEMMCGRLPFYNK-DHEKLFELILMEDLKFP----RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKE  420 (516)
T ss_pred             hhhhhHHHHHHHhccCccccc-chhHHHHHHHhhhccCC----ccCCHHHHHHHHHHhhcChHhhcCCCchhHHH
Confidence            999999999999999998744 45567776666665443    33457889999999999999995  3444443

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.93  E-value=1.2e-26  Score=162.50  Aligned_cols=145  Identities=21%  Similarity=0.241  Sum_probs=110.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc------------------ccccCccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH------------------IKDAIPIGIM   63 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------~~~~~~~~~~   63 (163)
                      |++.||.|||   +.+++|+|++|+||+++.++.++++|||++.........                  .......++.
T Consensus       110 ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (280)
T cd05581         110 EILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA  186 (280)
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCc
Confidence            7899999999   899999999999999999999999999998765433211                  1112345678


Q ss_pred             cccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCc
Q 043958           64 GFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESA  143 (163)
Q Consensus        64 ~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p  143 (163)
                      .|++||......++.++|+||+|+++++++++..|+..... ...........    .......++.+.+++.+||+.+|
T Consensus       187 ~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p  261 (280)
T cd05581         187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-YLTFQKILKLE----YSFPPNFPPDAKDLIEKLLVLDP  261 (280)
T ss_pred             cccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhcC----CCCCCccCHHHHHHHHHHhcCCH
Confidence            89999998888889999999999999999998877654332 22222222221    11222346789999999999999


Q ss_pred             CCCCCH----HHHHH
Q 043958          144 EDRPTM----IDVAK  154 (163)
Q Consensus       144 ~~Rpt~----~~i~~  154 (163)
                      ++|||+    +++++
T Consensus       262 ~~R~~~~~~~~~ll~  276 (280)
T cd05581         262 QDRLGVNEGYDELKA  276 (280)
T ss_pred             hhCCCcccCHHHHhc
Confidence            999999    77654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.93  E-value=7.1e-26  Score=155.50  Aligned_cols=147  Identities=17%  Similarity=0.181  Sum_probs=109.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.|++|||   +.+|+|||+||+||++..+...||.|||+++.....   ........+..|.|||.+.+..+...+|
T Consensus       126 q~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vd  199 (369)
T KOG0665|consen  126 QMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVD  199 (369)
T ss_pred             HHHHHHHHHH---hcceeecccCcccceecchhheeeccchhhcccCcc---cccCchhheeeccCchheeccCCcccch
Confidence            7889999999   999999999999999999999999999999766544   1222446788999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchh---------------------hhh----------------hhcccchhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPV---------------------IRE----------------ELCIQSSEK  124 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~---------------------~~~----------------~~~~~~~~~  124 (163)
                      |||+||++.||+.+...|......+.....+                     ...                .+.......
T Consensus       200 iwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~  279 (369)
T KOG0665|consen  200 IWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGS  279 (369)
T ss_pred             hhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCC
Confidence            9999999999999877766444332111000                     000                000000001


Q ss_pred             HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          125 DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       125 ~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ......+++++.+||..+|++|.+++++++
T Consensus       280 ~~~~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  280 KLDCSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             ccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence            122346889999999999999999999986

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.93  E-value=8.2e-27  Score=169.84  Aligned_cols=145  Identities=20%  Similarity=0.213  Sum_probs=123.5

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC---CCeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      .||+.||+|||   -++|+|+|+||+|+|+...   -.+|++|||+++.+++..-..   ...||+.|+|||.+..+.|+
T Consensus       671 tQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRr---sVVGTPAYLaPEVLrnkGyN  744 (888)
T KOG4236|consen  671 TQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRR---SVVGTPAYLAPEVLRNKGYN  744 (888)
T ss_pred             HHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhh---hhcCCccccCHHHHhhcccc
Confidence            38999999999   9999999999999999655   368999999999987654333   45899999999999999999


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ..-|+||+|+++|--+.|..||..++.   +-+++....+..+...+.+.++...+||...|+..-++|.|.++.+.
T Consensus       745 rSLDMWSVGVIiYVsLSGTFPFNEdEd---IndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~ls  818 (888)
T KOG4236|consen  745 RSLDMWSVGVIIYVSLSGTFPFNEDED---INDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLS  818 (888)
T ss_pred             ccccceeeeEEEEEEecccccCCCccc---hhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence            999999999999999999999876554   44444445555667778888999999999999999999999988775

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.93  E-value=1.2e-26  Score=168.03  Aligned_cols=137  Identities=18%  Similarity=0.264  Sum_probs=112.5

Q ss_pred             HHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccce
Q 043958            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDV   82 (163)
Q Consensus         3 i~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv   82 (163)
                      +++|++|||   +++||.||+||+|++++.+|-+|+.|||+++.+..+....   ++.||+.|.|||++.++..+.++|.
T Consensus       529 v~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTw---TFcGTpEYVAPEIILnKGHD~avDy  602 (732)
T KOG0614|consen  529 VLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTW---TFCGTPEYVAPEIILNKGHDRAVDY  602 (732)
T ss_pred             HHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccCCcee---eecCCcccccchhhhccCcchhhHH
Confidence            578999999   9999999999999999999999999999999998766544   4579999999999999999999999


Q ss_pred             eecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           83 FSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        83 ~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      ||+|++++|+++|..||...++ -..++.++.+--  ....+........+++++....+|.+|..
T Consensus       603 WaLGIli~ELL~G~pPFs~~dp-mktYn~ILkGid--~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  603 WALGILIYELLTGSPPFSGVDP-MKTYNLILKGID--KIEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHHHHHHHcCCCCCCCCch-HHHHHHHHhhhh--hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence            9999999999999887764443 334555544421  11222445667889999999999999964

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=1.5e-26  Score=166.81  Aligned_cols=144  Identities=19%  Similarity=0.246  Sum_probs=106.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   ..+++||||||+||+++.++.++++|||++........     ...++..|++||.+.+ ..++.++
T Consensus       126 qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~  197 (343)
T cd07880         126 QMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMT-----GYVVTRWYRAPEVILNWMHYTQTV  197 (343)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccccccccCcc-----ccccCCcccCHHHHhCCCCCCcHH
Confidence            7899999999   89999999999999999999999999999876543221     2346778999998875 3578899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh------------------hhc-----cc----chhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE------------------ELC-----IQ----SSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~-----~~----~~~~~~~~~~~~~  133 (163)
                      |+||+|+++++++++..|+.......... .....                  .+.     ..    .......+..+.+
T Consensus       198 Di~slG~ll~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (343)
T cd07880         198 DIWSVGCIMAEMLTGKPLFKGHDHLDQLM-EIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVN  276 (343)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHH
Confidence            99999999999999988765332211111 00000                  000     00    0001234567899


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+|+..+|++|||+.+++.
T Consensus       277 li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         277 VLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             HHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999999884

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=2.6e-26  Score=173.76  Aligned_cols=156  Identities=22%  Similarity=0.295  Sum_probs=129.7

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      +||++|+.|||   .++++||||-+.|+|+.+-..+|+.|||+++.............-.-.+.|||-|.+....|+.++
T Consensus       805 ~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqS  881 (1177)
T KOG1025|consen  805 YQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQS  881 (1177)
T ss_pred             HHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchh
Confidence            48999999999   999999999999999999999999999999887766555544333445679999999999999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||+++||+++-+..+....+.+++-+....+.   +.+.++.++.++.-++.+||..|+..||+++++...+.++.
T Consensus       882 DVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge---RLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  882 DVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE---RLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             hhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc---cCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence            999999999999986655555556666655544443   34555678889999999999999999999999999998876


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       959 rd  960 (1177)
T KOG1025|consen  959 RD  960 (1177)
T ss_pred             cC
Confidence            53

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.93  E-value=3.1e-26  Score=168.27  Aligned_cols=142  Identities=21%  Similarity=0.263  Sum_probs=122.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCC-ccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~-~~~   80 (163)
                      |++++++|||   +++|+|||||+.|+|++.+.++||+|||++.+...+....   +..|++.|.|||...+.+|. ..+
T Consensus       163 q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lq---t~cgsppyAaPEl~~g~~y~gpe~  236 (596)
T KOG0586|consen  163 QIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQ---TFCGSPPYAAPELFNGKKYDGPEV  236 (596)
T ss_pred             HHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeeccccccc---ccCCCCCccChHhhcCcccCCcce
Confidence            7899999999   9999999999999999999999999999998887544433   44699999999999988875 489


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++|.++.|..|| ....+.++-.+++.++++.+....    .++.+++++++..+|.+|++.+++.+
T Consensus       237 D~Wslgvvly~LV~GsLPF-DG~~lk~Lr~rvl~gk~rIp~~ms----~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  237 DIWSLGVVLYALVEGSLPF-DGQNLKELRPRVLRGKYRIPFYMS----CDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             ehhhhhhhheeeeeccccc-CCcccccccchheeeeecccceee----chhHHHHHHhhccCccccCCHHHhhh
Confidence            9999999999999998776 466778888888888877655544    67889999999999999999999875

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.93  E-value=4.8e-26  Score=155.88  Aligned_cols=146  Identities=25%  Similarity=0.282  Sum_probs=112.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +++.++.|||   ..+++|+||+|+||+++.++.++++|||.+.........   ....++..|++||...+..++.++|
T Consensus        95 ~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~---~~~~~~~~~~~pE~~~~~~~~~~~D  168 (244)
T smart00220       95 QILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLL---TTFVGTPEYMAPEVLLGKGYGKAVD  168 (244)
T ss_pred             HHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccccc---ccccCCcCCCCHHHHccCCCCchhh
Confidence            6789999999   889999999999999999999999999998776554311   1235677899999998888889999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|++|+++++++++..|+..........+........ ........+..+.+++.+||..+|++||++.++++
T Consensus       169 i~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      169 VWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP-FPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC-CccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            9999999999999887765433333333332222211 11111115678999999999999999999999886

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.92  E-value=3.7e-26  Score=146.43  Aligned_cols=149  Identities=15%  Similarity=0.166  Sum_probs=113.4

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCcc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~   79 (163)
                      +|++.||.++|   +++++|||+||+|.+++.+|.+|++|||+++..........  ...-|.+|.+|..+.+.+ |+..
T Consensus       108 lqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvrcys--aevvtlwyrppdvlfgakly~ts  182 (292)
T KOG0662|consen  108 LQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYS--AEVVTLWYRPPDVLFGAKLYSTS  182 (292)
T ss_pred             HHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeee--ceeeeeeccCcceeeeeehhccc
Confidence            48899999999   99999999999999999999999999999987654433222  235788999999998865 8999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhh----------------hhc--ccchh-------hHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE----------------ELC--IQSSE-------KDKQVQAFVEL  134 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------------~~~--~~~~~-------~~~~~~~~~~l  134 (163)
                      .|+||.||++.|+.....|.+.....++.+.++...                ++.  +..+.       .++....-+++
T Consensus       183 idmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdl  262 (292)
T KOG0662|consen  183 IDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDL  262 (292)
T ss_pred             hHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHH
Confidence            999999999999999888877666554433332211                000  00000       11223457889


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+.-+|..|.+++.+++
T Consensus       263 lqkll~cnp~qrisaeaalq  282 (292)
T KOG0662|consen  263 LQKLLKCNPAQRISAEAALQ  282 (292)
T ss_pred             HHHHhccCcccccCHHHHhc
Confidence            99999999999999998876

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.92  E-value=1.4e-25  Score=170.33  Aligned_cols=146  Identities=20%  Similarity=0.296  Sum_probs=121.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-----CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-----DY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-----~~   76 (163)
                      +++.||.+||   ...++|||||-.|||++.++.+|++|||++...........  +..||++|||||.+.-.     .|
T Consensus       131 e~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRn--T~iGtP~WMAPEViac~e~~d~ty  205 (953)
T KOG0587|consen  131 EILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRN--TFIGTPYWMAPEVIACDESPDATY  205 (953)
T ss_pred             HHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeeeeeeeeeeccccccc--CcCCCcccccceeeecccCCCCCc
Confidence            4688999999   89999999999999999999999999999987765544333  56799999999999642     37


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +..+|+||+|++..|+..|..|....++...++... . ++++....+.+.+.++.++|..||.+|.++||+..++++
T Consensus       206 d~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip-R-NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  206 DYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-R-NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             ccccchhhccceeehhcCCCCCccCcchhhhhccCC-C-CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            789999999999999999988887776666555432 2 233444556788999999999999999999999988875

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.92  E-value=2e-25  Score=159.97  Aligned_cols=160  Identities=20%  Similarity=0.275  Sum_probs=117.3

Q ss_pred             hHHHHHHHHhc------CCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-
Q 043958            2 EIANALAYLHV------GFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-   74 (163)
Q Consensus         2 qi~~~l~~lh~------~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-   74 (163)
                      .++.||+|||+      ..+++|+|||||++|||+..++++.|+|||++.....+.........+||..|||||.+.+. 
T Consensus       315 SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgai  394 (534)
T KOG3653|consen  315 SMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAI  394 (534)
T ss_pred             HHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhc
Confidence            46889999995      35678999999999999999999999999999888766655555557899999999999763 


Q ss_pred             CCC-----cccceeecchhhHHHhhhcccccc------cc----------chhhccchhhhhhhcccchhh---HHHHHH
Q 043958           75 DYN-----EKCDVFSFAGDRHWLLNRVKKHIE------CN----------TFDEIVDPVIREELCIQSSEK---DKQVQA  130 (163)
Q Consensus        75 ~~~-----~~~Dv~s~g~~~~~l~~~~~~~~~------~~----------~~~~~~~~~~~~~~~~~~~~~---~~~~~~  130 (163)
                      ++.     .+.||||+|.++||++++-.....      ..          ..+++-..+...+.++..+..   .....-
T Consensus       395 nl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~  474 (534)
T KOG3653|consen  395 NLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAV  474 (534)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHH
Confidence            232     369999999999999875332210      00          122222333333333332211   134567


Q ss_pred             HHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958          131 FVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus       131 ~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +++.+..||+.|++.|.|+.=+-+++.++..
T Consensus       475 l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~  505 (534)
T KOG3653|consen  475 LCETIEECWDHDAEARLTAGCVEERMAELMM  505 (534)
T ss_pred             HHHHHHHHcCCchhhhhhhHHHHHHHHHHhc
Confidence            8999999999999999999888887776643

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.9e-25  Score=159.17  Aligned_cols=160  Identities=19%  Similarity=0.281  Sum_probs=117.6

Q ss_pred             hHHHHHHHHhc-----CCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCC--CcccccCccccccccCccccccC
Q 043958            2 EIANALAYLHV-----GFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~-----~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~~~~PE~~~~~   74 (163)
                      .++.||++||.     ..++.|.|||||+.|||+.+++.+.|+|+|+|....+..  .....+...||..|||||.+...
T Consensus       316 S~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdet  395 (513)
T KOG2052|consen  316 SIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDET  395 (513)
T ss_pred             HHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhh
Confidence            47899999993     236789999999999999999999999999997655432  22333566899999999988642


Q ss_pred             ----CCC--cccceeecchhhHHHhhh----------cccccc----ccchhhccchhhhhhhcccch---hhHHHHHHH
Q 043958           75 ----DYN--EKCDVFSFAGDRHWLLNR----------VKKHIE----CNTFDEIVDPVIREELCIQSS---EKDKQVQAF  131 (163)
Q Consensus        75 ----~~~--~~~Dv~s~g~~~~~l~~~----------~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  131 (163)
                          -|.  ..+||||||.++||+..+          +.||..    +...+++.+-+...+.++..+   ....+...+
T Consensus       396 in~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m  475 (513)
T KOG2052|consen  396 INMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVM  475 (513)
T ss_pred             cChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHH
Confidence                232  259999999999997642          234432    222333333333333333222   334677889


Q ss_pred             HHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958          132 VELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      .++++.||..+|..|-|+-.+.+.|.++.+
T Consensus       476 ~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  476 AKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            999999999999999999999999998874

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=2.7e-25  Score=159.35  Aligned_cols=152  Identities=22%  Similarity=0.241  Sum_probs=119.1

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCccc-----ccCccccccccCccccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIK-----DAIPIGIMGFVATEYVT   72 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~~~~PE~~~   72 (163)
                      +||+.||.||... +.+|||-|+||.|||+   +.-|.+||.|||+++.+........     +....||.+|+|||.+.
T Consensus       575 MQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  575 MQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             HHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceee
Confidence            5899999999966 6799999999999999   4457899999999998876544321     23457999999999886


Q ss_pred             cC----CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhh-cccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           73 TG----DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL-CIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        73 ~~----~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      -+    +.+.|.||||+|+++|..++|..||-.....++++......+. ...++.-+..+++.+++|++||++--++|.
T Consensus       654 VgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~  733 (775)
T KOG1151|consen  654 VGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRI  733 (775)
T ss_pred             cCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhh
Confidence            44    3788999999999999999999998766666666655433222 123444455778999999999999989888


Q ss_pred             CHHHHH
Q 043958          148 TMIDVA  153 (163)
Q Consensus       148 t~~~i~  153 (163)
                      +.-++.
T Consensus       734 DV~qLA  739 (775)
T KOG1151|consen  734 DVQQLA  739 (775)
T ss_pred             hHHHHc
Confidence            876654

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=1.5e-25  Score=150.22  Aligned_cols=150  Identities=15%  Similarity=0.218  Sum_probs=106.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC--cccccCccccccccCccccccC-CCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET--HIKDAIPIGIMGFVATEYVTTG-DYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~-~~~~   78 (163)
                      +++.||.|+|   ...|+|||+|+.|+|++.+|.++++|||+++.......  .......+-|.+|++||.+.+. .|..
T Consensus       132 ~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~  208 (376)
T KOG0669|consen  132 GLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGP  208 (376)
T ss_pred             HHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCC
Confidence            4688999999   89999999999999999999999999999965543222  2222234568899999999874 5899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhcc-------------chh-----hhhhh--c-ccchh---hHH------HH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIV-------------DPV-----IREEL--C-IQSSE---KDK------QV  128 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~-------------~~~-----~~~~~--~-~~~~~---~~~------~~  128 (163)
                      +.|+|+.||++.++.++.+-+......+.+-             .+.     +-...  . .+...   ..+      ..
T Consensus       209 ~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd  288 (376)
T KOG0669|consen  209 PIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKD  288 (376)
T ss_pred             cchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCC
Confidence            9999999999999999876554332221100             000     00000  0 00000   001      12


Q ss_pred             HHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          129 QAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       129 ~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ....+|+.+++..||.+|+++++++.
T Consensus       289 ~~a~dLle~ll~~DP~kR~~ad~aln  314 (376)
T KOG0669|consen  289 DEALDLLEKLLKLDPTKRIDADQALN  314 (376)
T ss_pred             hhHHHHHHHHhccCcccCcchHhhhc
Confidence            36789999999999999999999875

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=4.1e-25  Score=157.06  Aligned_cols=136  Identities=18%  Similarity=0.282  Sum_probs=112.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +|+.||-+||   +++||.||+|.+|++++.+|.+||+|||+++.-.-.....  .+.-||+.|+|||++..++|+.+.|
T Consensus       458 EiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TT--kTFCGTPdYiAPEIi~YqPYgksvD  532 (683)
T KOG0696|consen  458 EIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTT--KTFCGTPDYIAPEIIAYQPYGKSVD  532 (683)
T ss_pred             HHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeecccccccccCCcce--eeecCCCcccccceEEecccccchh
Confidence            6889999999   9999999999999999999999999999986543332222  2457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      -||+|+++||++.|+.||. .+.-++++..+...+...+.    ..+.+..++.+..+.+.|.+|.
T Consensus       533 WWa~GVLLyEmlaGQpPFd-GeDE~elF~aI~ehnvsyPK----slSkEAv~ickg~ltK~P~kRL  593 (683)
T KOG0696|consen  533 WWAFGVLLYEMLAGQPPFD-GEDEDELFQAIMEHNVSYPK----SLSKEAVAICKGLLTKHPGKRL  593 (683)
T ss_pred             HHHHHHHHHHHHcCCCCCC-CCCHHHHHHHHHHccCcCcc----cccHHHHHHHHHHhhcCCcccc
Confidence            9999999999999987764 55667788877776654433    3456777888888999999885

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=1.7e-24  Score=149.28  Aligned_cols=150  Identities=20%  Similarity=0.310  Sum_probs=119.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC---CCeEECccccccccCCCCCccc-----ccCccccccccCccccc-
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIK-----DAIPIGIMGFVATEYVT-   72 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~~~~PE~~~-   72 (163)
                      +|+.||.|||   .++|.|||+||+|||-...   ..+||+||.+..-+..+.....     ..++.|+..|||||... 
T Consensus       184 dia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~  260 (463)
T KOG0607|consen  184 DIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDV  260 (463)
T ss_pred             HHHHHHHHHh---hcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhh
Confidence            5889999999   9999999999999998544   3479999999865543332221     13557888999999774 


Q ss_pred             --c--CCCCcccceeecchhhHHHhhhccccccccc--------------hhhccchhhhhhhcccchhhHHHHHHHHHH
Q 043958           73 --T--GDYNEKCDVFSFAGDRHWLLNRVKKHIECNT--------------FDEIVDPVIREELCIQSSEKDKQVQAFVEL  134 (163)
Q Consensus        73 --~--~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  134 (163)
                        +  .-|+.++|.||+|+++|-|+.|..||...=.              ...++..+..+.+.++...+...+.+.+++
T Consensus       261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdl  340 (463)
T KOG0607|consen  261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDL  340 (463)
T ss_pred             hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHH
Confidence              2  2488899999999999999999888764110              124566777888889999999999999999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +...+..++..|.++.+++.
T Consensus       341 isnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  341 ISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHhccHHhhhhhhhccC
Confidence            99999999999999888765

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.90  E-value=4e-24  Score=155.41  Aligned_cols=146  Identities=23%  Similarity=0.184  Sum_probs=109.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |+..||..|-   ..+++|.||||+|||++++. .+||||||.|.....+....    ..-+.+|.|||++.+.+|+...
T Consensus       544 QLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneitP----YLVSRFYRaPEIiLG~~yd~~i  616 (752)
T KOG0670|consen  544 QLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEITP----YLVSRFYRAPEIILGLPYDYPI  616 (752)
T ss_pred             HHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccCccccccccccccH----HHHHHhccCcceeecCcccCCc
Confidence            7788999999   89999999999999998764 57999999997776555432    2456689999999999999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhc------------------------c-----------chhh------------
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEI------------------------V-----------DPVI------------  113 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~------------------------~-----------~~~~------------  113 (163)
                      |+||+||.+||+.+|.-.|+...+.+-+                        +           +++.            
T Consensus       617 D~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vk  696 (752)
T KOG0670|consen  617 DTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVK  696 (752)
T ss_pred             cceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccC
Confidence            9999999999999887766543332100                        0           0000            


Q ss_pred             -----hhhh--cc-cchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          114 -----REEL--CI-QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       114 -----~~~~--~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                           ....  .+ ..........++.+|+.+|+..||++|.|..++++
T Consensus       697 Ptkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  697 PTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             cchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                 0000  00 11123345678999999999999999999998876

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.90  E-value=9.9e-24  Score=157.45  Aligned_cols=154  Identities=17%  Similarity=0.186  Sum_probs=115.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee--CCCCC--eEECccccccccCCCCCcccccCccccccccCcccccc-CCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF--DEDHV--AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~--~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~   76 (163)
                      +++.||.|||   ..+|+||||||.||++  +.+|.  -|++|||.|+...++...   .+.+||..|++||.... +.|
T Consensus       128 d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~---~S~vGT~~YLhPel~E~q~~y  201 (732)
T KOG4250|consen  128 DLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLF---TSLVGTEEYLHPELYERQKKY  201 (732)
T ss_pred             HHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCee---eeecCchhhcChHHHhhccCc
Confidence            4678999999   8999999999999998  44444  499999999988777632   35689999999999984 779


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhh---ccchhh---------------------hhhhcccchhhHHHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDE---IVDPVI---------------------REELCIQSSEKDKQVQAFV  132 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~---~~~~~~---------------------~~~~~~~~~~~~~~~~~~~  132 (163)
                      +..+|.|||||++|++++|..||........   +.....                     ....+++..........+-
T Consensus       202 ~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~  281 (732)
T KOG4250|consen  202 TATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLT  281 (732)
T ss_pred             CceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhh
Confidence            9999999999999999999999876444321   211111                     0111122223344556677


Q ss_pred             HHHHhccccCcCCCC--CHHHHHHHHHHHhh
Q 043958          133 ELAVKCVSESAEDRP--TMIDVAKQLRQAYR  161 (163)
Q Consensus       133 ~li~~cl~~~p~~Rp--t~~~i~~~L~~~~~  161 (163)
                      ..+..++..+|.+|.  .+.+..+.+..+.+
T Consensus       282 kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~  312 (732)
T KOG4250|consen  282 KWLASMLEWNPRKRGHEGFDRFFAEVDDILN  312 (732)
T ss_pred             HHHHHHHhhhHHHhCCCCcchHHHHHHHHHh
Confidence            788889999999998  77777777776654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.89  E-value=1.4e-23  Score=156.64  Aligned_cols=149  Identities=17%  Similarity=0.144  Sum_probs=101.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD------   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~------   75 (163)
                      |++.||.|||   ..+++||||||+||+++.++.++++|||++..+........ ....+++.|++||.+....      
T Consensus       317 ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~-~~g~~tp~Y~aPE~l~~~~~~~~~~  392 (507)
T PLN03224        317 QVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNP-LYGMLDPRYSPPEELVMPQSCPRAP  392 (507)
T ss_pred             HHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCc-cccCCCcceeChhhhcCCCCCCccc
Confidence            6889999999   89999999999999999999999999999976543322111 1223467899999875322      


Q ss_pred             --------------C--CcccceeecchhhHHHhhhccccccccc-hhh---ccchhh-----hhhhcccchhhHHHHHH
Q 043958           76 --------------Y--NEKCDVFSFAGDRHWLLNRVKKHIECNT-FDE---IVDPVI-----REELCIQSSEKDKQVQA  130 (163)
Q Consensus        76 --------------~--~~~~Dv~s~g~~~~~l~~~~~~~~~~~~-~~~---~~~~~~-----~~~~~~~~~~~~~~~~~  130 (163)
                                    +  ..+.|+||+||++++|+++..+++.... ...   ..+...     ..............+..
T Consensus       393 ~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~  472 (507)
T PLN03224        393 APAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEA  472 (507)
T ss_pred             hhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChH
Confidence                          1  1247999999999999987653332110 000   000000     00011122233445688


Q ss_pred             HHHHHHhccccCc---CCCCCHHHHHH
Q 043958          131 FVELAVKCVSESA---EDRPTMIDVAK  154 (163)
Q Consensus       131 ~~~li~~cl~~~p---~~Rpt~~~i~~  154 (163)
                      ..+++.+++..+|   .+|+|+.++++
T Consensus       473 ~~dLi~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        473 GWDLACKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             HHHHHHHHhccCCCCcccCCCHHHHhC
Confidence            9999999999866   68999999986

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.89  E-value=5.2e-24  Score=141.05  Aligned_cols=147  Identities=18%  Similarity=0.226  Sum_probs=111.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      |+++||.|+|   ++||+|||+||.|++++.. -.++++|+|+|.+...+.....   ...+..|-.||.+..- .|+..
T Consensus       140 elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV---RVASRyfKGPELLVdy~~YDYS  213 (338)
T KOG0668|consen  140 ELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV---RVASRYFKGPELLVDYQMYDYS  213 (338)
T ss_pred             HHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeee---eeehhhcCCchheeechhcccc
Confidence            6899999999   9999999999999999754 5689999999988876654433   3567788899998764 48889


Q ss_pred             cceeecchhhHHHhhhccccccccchh-hccchhh----------hhhhc----------------------ccchhhHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFD-EIVDPVI----------REELC----------------------IQSSEKDK  126 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~-~~~~~~~----------~~~~~----------------------~~~~~~~~  126 (163)
                      -|+|||||++..++....||+.+.... +++....          ..++.                      .......-
T Consensus       214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl  293 (338)
T KOG0668|consen  214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL  293 (338)
T ss_pred             HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence            999999999999999999999766432 2221100          00000                      00001112


Q ss_pred             HHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          127 QVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       127 ~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++++.+++.+.|.+|.++|+|+.|+++
T Consensus       294 ~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  294 VSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             CChHHHHHHHHHHhhccccccchHHHhc
Confidence            3478999999999999999999999875

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.89  E-value=1.5e-23  Score=162.42  Aligned_cols=94  Identities=9%  Similarity=0.133  Sum_probs=70.7

Q ss_pred             cccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhcc
Q 043958           60 IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCV  139 (163)
Q Consensus        60 ~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  139 (163)
                      .||+.|+|||.+.+..++.++||||+||++|++++|..||.. ....+++..+.......... ....+..+.+++..||
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~-~~~~~~~~~il~~~~~~p~~-~~~~~~~~~~~l~~lL  618 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFND-ETPQQVFQNILNRDIPWPEG-EEKLSVNAQNAIEILL  618 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC-CCHHHHHHHHHhcCCCCCcc-cccCCHHHHHHHHHHc
Confidence            357789999999988899999999999999999999877653 33344444443332221111 1245577899999999


Q ss_pred             ccCcCCCCCHHHHHHH
Q 043958          140 SESAEDRPTMIDVAKQ  155 (163)
Q Consensus       140 ~~~p~~Rpt~~~i~~~  155 (163)
                      ..||.+||++.++++.
T Consensus       619 ~~dP~~R~ta~e~l~h  634 (669)
T cd05610         619 TMDPTKRAGLKELKQH  634 (669)
T ss_pred             ccChhHCcCHHHHHhC
Confidence            9999999999999873

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1.7e-23  Score=155.30  Aligned_cols=141  Identities=23%  Similarity=0.305  Sum_probs=103.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccC---------CCCCc-------------------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP---------DGETH-------------------   53 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~---------~~~~~-------------------   53 (163)
                      ++.-|+++.|   ..|+|||||||+|||+|.+|.+||.|||++.-..         .+...                   
T Consensus       737 EltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lk  813 (1034)
T KOG0608|consen  737 ELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLK  813 (1034)
T ss_pred             HHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccch
Confidence            3556899999   9999999999999999999999999999984221         10000                   


Q ss_pred             ------------ccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccc
Q 043958           54 ------------IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS  121 (163)
Q Consensus        54 ------------~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (163)
                                  ......+||..|+|||.+....|+..+|.||.|+++++|+.|..||....+ .+.-.+++.+...+..
T Consensus       814 vL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp-~~tq~kv~nw~~~l~~  892 (1034)
T KOG0608|consen  814 VLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTP-GETQYKVINWRNFLHI  892 (1034)
T ss_pred             HHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCC-Ccceeeeeehhhcccc
Confidence                        001245699999999999999999999999999999999999888764433 3333444444444555


Q ss_pred             hhhHHHHHHHHHHHHhccccCcCCCC
Q 043958          122 SEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus       122 ~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      ....+.+.++.++|.++.. +++.|.
T Consensus       893 ~~~~~ls~e~~~li~kLc~-sad~RL  917 (1034)
T KOG0608|consen  893 PYQGNLSKEALDLIQKLCC-SADSRL  917 (1034)
T ss_pred             ccccccCHHHHHHHHHHhc-Chhhhh
Confidence            6666677788888876332 344553

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.88  E-value=2.4e-23  Score=154.75  Aligned_cols=147  Identities=20%  Similarity=0.268  Sum_probs=119.5

Q ss_pred             HHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCcc
Q 043958            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNEK   79 (163)
Q Consensus         3 i~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~~   79 (163)
                      .+.||+|||   +++-+|||||-.||+++..|-+|++|||.+..++..-.+..  .+.||++||+||...   .+.|..+
T Consensus       121 tl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~Krk--sfiGtpywmapEvaaverkggynql  195 (829)
T KOG0576|consen  121 TLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRK--SFIGTPYWMAPEVAAVERKGGYNQL  195 (829)
T ss_pred             hhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhhhhhhhh--cccCCccccchhHHHHHhccccccc
Confidence            457999999   89999999999999999999999999999977765443332  467999999999874   4679999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+|++|++..|+-+.+.|.+..++.+.++---..+.-.+........++.|.+|++.|+.++|.+|||++.++.
T Consensus       196 cdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  196 CDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             ccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            999999999999999998888777766554333333222334445567789999999999999999999988765

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=1.1e-22  Score=141.76  Aligned_cols=137  Identities=18%  Similarity=0.268  Sum_probs=107.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +|..||.|||   +++||.||+|.+|+|++..|.+|+.|+|.++.-.......  .++-||+.|.|||++.+..|....|
T Consensus       359 ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~t--stfcgtpnyiapeilrgeeygfsvd  433 (593)
T KOG0695|consen  359 EICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTT--STFCGTPNYIAPEILRGEEYGFSVD  433 (593)
T ss_pred             HHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCCCCCccc--ccccCCCcccchhhhcccccCceeh
Confidence            5788999999   9999999999999999999999999999996544333322  3567999999999999999999999


Q ss_pred             eeecchhhHHHhhhcccccc--cc-----chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           82 VFSFAGDRHWLLNRVKKHIE--CN-----TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      -|++|++++||+.|..||.-  ..     .-+-+++.++..+.+.+...    +.....+++..+++||.+|.
T Consensus       434 wwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl----svkas~vlkgflnkdp~erl  502 (593)
T KOG0695|consen  434 WWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL----SVKASHVLKGFLNKDPKERL  502 (593)
T ss_pred             HHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee----ehhhHHHHHHhhcCCcHHhc
Confidence            99999999999999998752  11     11224444555554443333    34566788888999999985

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=4.9e-22  Score=151.24  Aligned_cols=150  Identities=15%  Similarity=0.145  Sum_probs=114.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCccccccCCCCc-
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGDYNE-   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~-   78 (163)
                      |++.|++|+|   ..++.|||+|++|+++..+|.+|++|||.+.........  .......|+..|+|||.+.+..|.. 
T Consensus       428 qL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr  504 (601)
T KOG0590|consen  428 QLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPR  504 (601)
T ss_pred             HHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcc
Confidence            7889999999   999999999999999999999999999998655433332  2223457888999999999999987 


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhc----cchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEI----VDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ..||||.|+++..|..++.|+......+..    ...................+.+.+.++.++|+.+|.+|.|+++|++
T Consensus       505 ~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  505 AVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             hhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            599999999999999998876544333221    1111111111122234456678899999999999999999999987

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.86  E-value=8.8e-22  Score=131.83  Aligned_cols=113  Identities=26%  Similarity=0.420  Sum_probs=96.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      +++.++++||   ..+++|+|++|.||+++. ++.++++|||.+........  ......+...|++||..... ..+.+
T Consensus       100 ~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~  174 (215)
T cd00180         100 QILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEK  174 (215)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccCCCCccChhHhcccCCCCch
Confidence            6789999999   889999999999999999 89999999999876654432  11123466789999988776 77889


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      .|+|++|++++++                                    ..+.+++..|++.+|++||++.++++.
T Consensus       175 ~D~~~lg~~~~~l------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         175 SDIWSLGVILYEL------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             hhhHHHHHHHHHH------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            9999999999998                                    678999999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.82  E-value=2.6e-20  Score=132.06  Aligned_cols=149  Identities=24%  Similarity=0.258  Sum_probs=102.5

Q ss_pred             HHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccC-----------------C-C-------------
Q 043958            3 IANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIP-----------------D-G-------------   50 (163)
Q Consensus         3 i~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~-----------------~-~-------------   50 (163)
                      ++.||+++|   ..||+||||||+|++.+.. +.-.|.|||++....                 . .             
T Consensus       141 ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~  217 (418)
T KOG1167|consen  141 LLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATAS  217 (418)
T ss_pred             HHHHhhhhh---ccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccccccc
Confidence            578999999   9999999999999999754 556899999996210                 0 0             


Q ss_pred             -----------CCcccccCccccccccCccccccC-CCCcccceeecchhhHHHhhhccccccccc-hhhcc--------
Q 043958           51 -----------ETHIKDAIPIGIMGFVATEYVTTG-DYNEKCDVFSFAGDRHWLLNRVKKHIECNT-FDEIV--------  109 (163)
Q Consensus        51 -----------~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~-~~~~~--------  109 (163)
                                 ..........||++|.|||.+..- ..+.++|+||.|+++..++++..||+.... ...+.        
T Consensus       218 ~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~  297 (418)
T KOG1167|consen  218 KPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGS  297 (418)
T ss_pred             CCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhCh
Confidence                       000001234699999999999764 478899999999999999999999875332 11000        


Q ss_pred             ----------ch--hhh-----------hhhc---------------ccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958          110 ----------DP--VIR-----------EELC---------------IQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus       110 ----------~~--~~~-----------~~~~---------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                                ..  ...           ..+.               .........+..+.+++.+|+..+|.+|.|+++
T Consensus       298 ~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEe  377 (418)
T KOG1167|consen  298 AEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAED  377 (418)
T ss_pred             HHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHH
Confidence                      00  000           0000               000011112347899999999999999999999


Q ss_pred             HHH
Q 043958          152 VAK  154 (163)
Q Consensus       152 i~~  154 (163)
                      +++
T Consensus       378 ALk  380 (418)
T KOG1167|consen  378 ALK  380 (418)
T ss_pred             Hhc
Confidence            886

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.82  E-value=1.5e-20  Score=127.39  Aligned_cols=150  Identities=17%  Similarity=0.203  Sum_probs=102.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee-C-CCCCeEECccccccccCCCCCcccccCccccccccCcccccc---CC-
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF-D-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GD-   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~-~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~-   75 (163)
                      |+++|+.|+|   +++++|||||.+|||+ + ....+|++|||..+..+......     .....|.+||.+..   +. 
T Consensus       129 ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~-----~~~~~y~~pe~~~~~~ne~~  200 (378)
T KOG1345|consen  129 QLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYL-----EYVNNYHAPELCDTVVNEKL  200 (378)
T ss_pred             HHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeecccccccCceehhh-----hhhcccCCcHHHhhccccce
Confidence            7899999999   9999999999999999 2 33479999999986554433221     23445788887653   22 


Q ss_pred             -CCcccceeecchhhHHHhhhccccccccchhhccchh---hhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           76 -YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPV---IREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        76 -~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                       ....+|+|.||++++.+++|..|+......+.-+...   ......-........++.+.++.++-+..++++|--+.+
T Consensus       201 ~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~  280 (378)
T KOG1345|consen  201 VVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT  280 (378)
T ss_pred             EecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHH
Confidence             4668999999999999999988866322111111111   111111112223346678899999999999999976666


Q ss_pred             HHHHHHHH
Q 043958          152 VAKQLRQA  159 (163)
Q Consensus       152 i~~~L~~~  159 (163)
                      +.+..+..
T Consensus       281 ~kk~rk~~  288 (378)
T KOG1345|consen  281 AKKMRKCL  288 (378)
T ss_pred             HHHHHHHH
Confidence            66555443

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.79  E-value=1.3e-19  Score=133.40  Aligned_cols=157  Identities=24%  Similarity=0.271  Sum_probs=113.5

Q ss_pred             hHHHHHHHHhcCCCCCe-EeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC---C--
Q 043958            2 EIANALAYLHVGFPRPI-VFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG---D--   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~-~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~--   75 (163)
                      +++.||+|+|.   .++ .|+.+++.|++++....+|+.|||+....................-|.|||.+.+.   .  
T Consensus        56 di~~Gl~ylh~---s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~  132 (484)
T KOG1023|consen   56 DISKGLAYLHN---SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLE  132 (484)
T ss_pred             HHHHHHHHHhc---CcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccccccc
Confidence            57899999994   444 99999999999999999999999998666431111111122345579999998763   1  


Q ss_pred             --CCcccceeecchhhHHHhhhccccccccc---hhhccchhhh-hhhccc--chhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           76 --YNEKCDVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIR-EELCIQ--SSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        76 --~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                        .+.+.|+||+|++++|++.+..|+.....   ..+++..+.. +...++  ........+.+..++..||..+|+.||
T Consensus       133 ~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rP  212 (484)
T KOG1023|consen  133 SALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRP  212 (484)
T ss_pred             ccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCc
Confidence              46789999999999999999998765322   1344444333 221111  111223445799999999999999999


Q ss_pred             CHHHHHHHHHHHhh
Q 043958          148 TMIDVAKQLRQAYR  161 (163)
Q Consensus       148 t~~~i~~~L~~~~~  161 (163)
                      +++++...++.+..
T Consensus       213 s~~~i~~~~~~~~~  226 (484)
T KOG1023|consen  213 SIEQIRSKLLTINK  226 (484)
T ss_pred             cHHHHHhhhhhhcc
Confidence            99999998887764

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.77  E-value=7.7e-20  Score=134.63  Aligned_cols=92  Identities=20%  Similarity=0.309  Sum_probs=81.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc-cc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE-KC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~-~~   80 (163)
                      ||+.|+++||   +.+|+|||||-+|+.++.+|.+|++|||.+....++.-    ..++||..|.|||.+.+.+|-. .-
T Consensus       678 QV~agi~hlh---~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgpf----d~f~gtv~~aapevl~g~~y~gk~q  750 (772)
T KOG1152|consen  678 QVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGPF----DVFVGTVDYAAPEVLGGEKYLGKPQ  750 (772)
T ss_pred             HHHhcccccc---ccCceecccccccEEEecCCeEEEeeccchhhhcCCCc----ceeeeeccccchhhhCCCccCCCcc
Confidence            7899999999   99999999999999999999999999999876655443    2567999999999999988855 59


Q ss_pred             ceeecchhhHHHhhhccccc
Q 043958           81 DVFSFAGDRHWLLNRVKKHI  100 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~  100 (163)
                      |||++|+++|.+++...||+
T Consensus       751 diwalgillytivykenpyy  770 (772)
T KOG1152|consen  751 DIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhhhhhheeeEEEeccCCCc
Confidence            99999999999998888875

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.75  E-value=1.3e-19  Score=126.01  Aligned_cols=129  Identities=17%  Similarity=0.102  Sum_probs=85.8

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC------
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG------   74 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~------   74 (163)
                      +|+++.+++||   ..+++|+||+|+|++++.+|.+.++||+.....+.....     ...+..|.|||.....      
T Consensus       152 ~Q~I~lvA~Lh---~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-----~~~~~~~~PPe~~~~~~~~~~~  223 (288)
T PF14531_consen  152 VQMIRLVANLH---SYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-----SEFPVAFTPPELESCAGQFGQN  223 (288)
T ss_dssp             HHHHHHHHHHH---HTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-----GGS-TTTS-HHHHHHHTSCHHS
T ss_pred             HHHHHHHHHHh---hcceEecccceeeEEEcCCCCEEEcChHHHeecCceeec-----cCCCcccCChhhhhhhcccCcc
Confidence            37789999999   999999999999999999999999999877555432221     1234678999976432      


Q ss_pred             --CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           75 --DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        75 --~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                        .++.+.|.|++|+++|++.++..|+-.... ......    .  +. .+. +.++.++.||..+|+.+|++|
T Consensus       224 ~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~-~~~~~~----~--f~-~C~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  224 NAPYTFATDAWQLGITLYSLWCGRLPFGLSSP-EADPEW----D--FS-RCR-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             EEEE-HHHHHHHHHHHHHHHHHSS-STCCCGG-GSTSGG----G--GT-TSS----HHHHHHHHHHT-SSGGGS
T ss_pred             cceeeeccCHHHHHHHHHHHHHccCCCCCCCc-cccccc----c--ch-hcC-CcCHHHHHHHHHHccCCcccC
Confidence              367899999999999999999888653221 111111    1  11 122 678899999999999999988

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.74  E-value=7.6e-19  Score=136.68  Aligned_cols=141  Identities=19%  Similarity=0.230  Sum_probs=113.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCC--------CCCcc-----cccCccccccccCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD--------GETHI-----KDAIPIGIMGFVAT   68 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~--------~~~~~-----~~~~~~~~~~~~~P   68 (163)
                      +.+.+++|+|   ..+|+|||+||+|.+++.-|.+|+.|||+.+..--        +....     ......+|+.|.||
T Consensus       151 dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaP  227 (1205)
T KOG0606|consen  151 DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAP  227 (1205)
T ss_pred             hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccCh
Confidence            4567899999   99999999999999999999999999999864321        11000     01133699999999


Q ss_pred             cccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           69 EYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        69 E~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      |++..+.|...+|.|++|+++|+++.+..||+ .+..++++..++......+.. .....+++++++.++|+.+|..|-
T Consensus       228 eVilrqgygkpvdwwamGiIlyeFLVgcvpff-Gdtpeelfg~visd~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  228 EVILRQGYGKPVDWWAMGIILYEFLVGCVPFF-GDTPEELFGQVISDDIEWPEE-DEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hhhhhhccCCCccHHHHHHHHHHHheeeeecc-CCCHHHHHhhhhhhhcccccc-CcCCCHHHHHHHHHHHHhChHhhc
Confidence            99999999999999999999999999999887 556777777776665444333 445678999999999999999995

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.74  E-value=1.8e-18  Score=117.29  Aligned_cols=111  Identities=26%  Similarity=0.221  Sum_probs=86.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccc-ccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV-TTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~-~~~~~~~~~   80 (163)
                      +++.++.+||   ..+++|+|++|.|++++.++.++++|||.+......... ......++..|++||.. ....++.++
T Consensus       106 ~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~  181 (225)
T smart00221      106 QILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LLKTVKGTPFYLAPEVLLGGKGYGEAV  181 (225)
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cccceeccCCcCCHhHhcCCCCCCchh
Confidence            6789999999   889999999999999999999999999998776544311 11133566789999988 556678899


Q ss_pred             ceeecchhhHHHhhhcccccc-ccchhhccchhhhhh
Q 043958           81 DVFSFAGDRHWLLNRVKKHIE-CNTFDEIVDPVIREE  116 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~  116 (163)
                      |+|++|+++++++++..|+.. .+....+.+.+..+.
T Consensus       182 Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      182 DIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             hHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            999999999999998888754 344445555554443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.73  E-value=7.8e-18  Score=119.86  Aligned_cols=150  Identities=17%  Similarity=0.168  Sum_probs=104.2

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeee--CCCC--CeEECccccccccCCCCCc----ccccCccccccccCccccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILF--DEDH--VAKLFDFSLAESIPDGETH----IKDAIPIGIMGFVATEYVT   72 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~--~~~~--~~~l~dfg~~~~~~~~~~~----~~~~~~~~~~~~~~PE~~~   72 (163)
                      .|+++|+.|||   .+++.|||+|++|||+  +.++  .+.++|||.+---...+-.    .......|+...||||+..
T Consensus       348 aQlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  348 AQLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             HHHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence            38899999999   9999999999999999  4444  4688999998433221111    1112335777889999886


Q ss_pred             cCC-----CC-cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           73 TGD-----YN-EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        73 ~~~-----~~-~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      ..+     .+ .|+|.|+.|.+.||++....||+...  +..++....... .....+..+++.+++++...++.||++|
T Consensus       425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rG--em~L~~r~Yqe~-qLPalp~~vpp~~rqlV~~lL~r~pskR  501 (598)
T KOG4158|consen  425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRG--EMLLDTRTYQES-QLPALPSRVPPVARQLVFDLLKRDPSKR  501 (598)
T ss_pred             cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccc--hheechhhhhhh-hCCCCcccCChHHHHHHHHHhcCCcccc
Confidence            432     22 38999999999999999999987522  122222221111 1223345677889999999999999999


Q ss_pred             CCHHHHHHHH
Q 043958          147 PTMIDVAKQL  156 (163)
Q Consensus       147 pt~~~i~~~L  156 (163)
                      ++..-....|
T Consensus       502 vsp~iAANvl  511 (598)
T KOG4158|consen  502 VSPNIAANVL  511 (598)
T ss_pred             CCccHHHhHH
Confidence            9876444433

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.73  E-value=1.4e-18  Score=135.83  Aligned_cols=148  Identities=14%  Similarity=0.104  Sum_probs=102.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccc--cCCCCCc---ccccCccccccccCccccccC--
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES--IPDGETH---IKDAIPIGIMGFVATEYVTTG--   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~--~~~~~~~---~~~~~~~~~~~~~~PE~~~~~--   74 (163)
                      |++.||..+|   ..+|.|+|||.+|||++.=+.+.+.||...+-  .+..+..   .-..+.....+|+|||-+...  
T Consensus       128 QLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~  204 (1431)
T KOG1240|consen  128 QLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALG  204 (1431)
T ss_pred             HHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhcccc
Confidence            8999999999   99999999999999999988999999987642  2222111   111233344579999977431  


Q ss_pred             --------C-CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCC
Q 043958           75 --------D-YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAED  145 (163)
Q Consensus        75 --------~-~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  145 (163)
                              + .+.+-||||+||+++|++.-+.|.|.-   .+++.....+......-...-....+++++..|++.||++
T Consensus       205 ~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L---SQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~  281 (1431)
T KOG1240|consen  205 KTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL---SQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSK  281 (1431)
T ss_pred             ccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH---HHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchh
Confidence                    1 466889999999999999887777632   2222211111100000001112347899999999999999


Q ss_pred             CCCHHHHHHH
Q 043958          146 RPTMIDVAKQ  155 (163)
Q Consensus       146 Rpt~~~i~~~  155 (163)
                      |.++++.++.
T Consensus       282 RlSAedyL~~  291 (1431)
T KOG1240|consen  282 RLSAEDYLQK  291 (1431)
T ss_pred             ccCHHHHHHh
Confidence            9999999875

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.73  E-value=7.3e-19  Score=128.12  Aligned_cols=127  Identities=24%  Similarity=0.350  Sum_probs=92.5

Q ss_pred             CCeEeccCCCCCeeeCCCCCeEECccccccccCCCC----CcccccCccccccccCccccccCCCCcccceeecchhhHH
Q 043958           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE----THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHW   91 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~----~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~   91 (163)
                      ++.+|+|+||.||+...+..+||.|||+...+....    .........||..||+||.+.+..|+.++|||+||++++|
T Consensus       375 k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~E  454 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAE  454 (516)
T ss_pred             ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHH
Confidence            688999999999999999999999999987665544    2222335679999999999999999999999999999999


Q ss_pred             Hhhhcc-ccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           92 LLNRVK-KHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        92 l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      ++..-. .+.......++-+..+...       .....+.-..|+.+++...|..||++
T Consensus       455 L~~~f~T~~er~~t~~d~r~g~ip~~-------~~~d~p~e~~ll~~lls~~p~~RP~~  506 (516)
T KOG1033|consen  455 LLIQFSTQFERIATLTDIRDGIIPPE-------FLQDYPEEYTLLQQLLSPSPEERPSA  506 (516)
T ss_pred             HHHHhccHHHHHHhhhhhhcCCCChH-------HhhcCcHHHHHHHHhcCCCcccCchH
Confidence            987322 2222223333333222211       11122345578999999999999943

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.69  E-value=3.7e-17  Score=115.94  Aligned_cols=150  Identities=23%  Similarity=0.320  Sum_probs=108.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcc----cccCccccccccCcccccc---
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHI----KDAIPIGIMGFVATEYVTT---   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~----~~~~~~~~~~~~~PE~~~~---   73 (163)
                      |++.++.|+|   ..+++|||+||+||+++..+ .+++.|||.+..........    ......++..|++||.+.+   
T Consensus       109 ~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~  185 (384)
T COG0515         109 QILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSL  185 (384)
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCC
Confidence            6788999999   89999999999999999988 69999999997555443221    2235678999999999987   


Q ss_pred             CCCCcccceeecchhhHHHhhhccccccccc---hhhccchhhhhhhc-ccchhh----HHHHHHHHHHHHhccccCcCC
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELC-IQSSEK----DKQVQAFVELAVKCVSESAED  145 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~li~~cl~~~p~~  145 (163)
                      ..++...|+|++|+++++++.+..|+.....   .............. ......    ......+.+++..++..+|..
T Consensus       186 ~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (384)
T COG0515         186 AYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKN  265 (384)
T ss_pred             CCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchh
Confidence            4678899999999999998888888443322   12222222222111 011111    112357889999999999999


Q ss_pred             CCCHHHHHH
Q 043958          146 RPTMIDVAK  154 (163)
Q Consensus       146 Rpt~~~i~~  154 (163)
                      |.+..+...
T Consensus       266 r~~~~~~~~  274 (384)
T COG0515         266 RLSSSSDLS  274 (384)
T ss_pred             cCCHHHHhh
Confidence            998776654

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.69  E-value=6.8e-17  Score=115.81  Aligned_cols=157  Identities=17%  Similarity=0.169  Sum_probs=108.3

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-----CCeEECcccccc--ccCCCCC----ccc--ccCccccccccC
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAE--SIPDGET----HIK--DAIPIGIMGFVA   67 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-----~~~~l~dfg~~~--~~~~~~~----~~~--~~~~~~~~~~~~   67 (163)
                      +|++.+|++||   +.+++||||||+|++++..     ..+.+.|||+++  .......    ...  .....||..|.+
T Consensus       129 ~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S  205 (322)
T KOG1164|consen  129 IQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYAS  205 (322)
T ss_pred             HHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCcccccc
Confidence            47899999999   9999999999999999765     358999999998  3322211    111  123569999999


Q ss_pred             ccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccch-hhHHHHHHHHHHHHhccccCcCCC
Q 043958           68 TEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS-EKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        68 PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      +....+...+.+.|+||++-++.++..+..|+.......+ .............. .....+..+..+...+-..+...+
T Consensus       206 ~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (322)
T KOG1164|consen  206 INVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDK  284 (322)
T ss_pred             HHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCC
Confidence            9988888899999999999999998888755433221111 11111111101111 111233566666666667899999


Q ss_pred             CCHHHHHHHHHHHhh
Q 043958          147 PTMIDVAKQLRQAYR  161 (163)
Q Consensus       147 pt~~~i~~~L~~~~~  161 (163)
                      |....+...|+....
T Consensus       285 Pdy~~~~~~l~~~~~  299 (322)
T KOG1164|consen  285 PDYEKLAELLKDVFD  299 (322)
T ss_pred             CCHHHHHHHHHHHHH
Confidence            999999998877654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.69  E-value=1.1e-17  Score=113.99  Aligned_cols=147  Identities=16%  Similarity=0.159  Sum_probs=107.4

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEEC--ccccccccCCCCCcccccCccccccccCccccccCCCC-
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLF--DFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-   77 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~-   77 (163)
                      ++++.|++|||+- ..-+.---+++..++++++.+.+++  |--++...         ......+.||+||.+...+-+ 
T Consensus       296 ldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsfqe---------~gr~y~pawmspealqrkped~  365 (448)
T KOG0195|consen  296 LDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE---------VGRAYSPAWMSPEALQRKPEDL  365 (448)
T ss_pred             HHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeeeec---------cccccCcccCCHHHHhcCchhc
Confidence            4689999999953 2334445688899999999887763  22111000         012356789999999876532 


Q ss_pred             --cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           78 --EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        78 --~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                        .++|+|||++++||+.++..||....+.+--+...+.+   ++...++..+..+.+++.-|++.||.+||.++.++-.
T Consensus       366 n~raadmwsfaillwel~trevpfadlspmecgmkialeg---lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpi  442 (448)
T KOG0195|consen  366 NIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEG---LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPI  442 (448)
T ss_pred             chhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhcc---ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhh
Confidence              37999999999999999999987666655444443333   2333445667889999999999999999999999999


Q ss_pred             HHHHh
Q 043958          156 LRQAY  160 (163)
Q Consensus       156 L~~~~  160 (163)
                      |+++.
T Consensus       443 lekm~  447 (448)
T KOG0195|consen  443 LEKMI  447 (448)
T ss_pred             HHHhc
Confidence            99875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.62  E-value=1.1e-16  Score=118.91  Aligned_cols=128  Identities=21%  Similarity=0.223  Sum_probs=104.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +++-+++++|   +.+++|||+|++||+++.+|.+++.|||+++.....+..      -|+..||+||++.  ....+.|
T Consensus       105 elaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~------cgt~eymApEI~~--gh~~a~D  173 (612)
T KOG0603|consen  105 ELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA------CGTYEYRAPEIIN--GHLSAAD  173 (612)
T ss_pred             HHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc------ccchhhhhhHhhh--ccCCccc
Confidence            4677899999   999999999999999999999999999998766544433      4788999999887  4577899


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      .||+|++.++++++..|+..     +++..+....    ...+......+++++..++..+|.+|.-.
T Consensus       174 ~ws~gvl~felltg~~pf~~-----~~~~~Il~~~----~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  174 WWSFGVLAFELLTGTLPFGG-----DTMKRILKAE----LEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             chhhhhhHHHHhhCCCCCch-----HHHHHHhhhc----cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            99999999999999999875     4444444433    23345677889999999999999999643

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.56  E-value=1.7e-14  Score=100.77  Aligned_cols=158  Identities=12%  Similarity=0.146  Sum_probs=115.1

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-----CCeEECccccccccCCCCCcccc-----cCccccccccCccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAESIPDGETHIKD-----AIPIGIMGFVATEY   70 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-----~~~~l~dfg~~~~~~~~~~~~~~-----~~~~~~~~~~~PE~   70 (163)
                      +|++.-++|+|   ++.+|.|||||+|+|++..     ..+.++|||+++.+.+..++...     ....||..||+-..
T Consensus       131 ~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINT  207 (449)
T KOG1165|consen  131 KQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINT  207 (449)
T ss_pred             HHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeec
Confidence            37778899999   9999999999999999654     35789999999988776555332     24569999999988


Q ss_pred             cccCCCCcccceeecchhhHHHhhhcccccc--ccchhhccchhhhhhhc-ccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           71 VTTGDYNEKCDVFSFAGDRHWLLNRVKKHIE--CNTFDEIVDPVIREELC-IQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        71 ~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      -.+...+.+.|+=|+|-++.+++.|..|+..  ..+..+-++++-..+-. +....-.+.+.++..-+.-.-..+-.+-|
T Consensus       208 HlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~P  287 (449)
T KOG1165|consen  208 HLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETP  287 (449)
T ss_pred             cccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCC
Confidence            8888899999999999999999988888664  22333333333222211 11112234556666666666677888999


Q ss_pred             CHHHHHHHHHHHhh
Q 043958          148 TMIDVAKQLRQAYR  161 (163)
Q Consensus       148 t~~~i~~~L~~~~~  161 (163)
                      +.+.+...+..++.
T Consensus       288 DYdylr~Lf~dvld  301 (449)
T KOG1165|consen  288 DYDYLRKLFDDVLD  301 (449)
T ss_pred             CHHHHHHHHHHHHH
Confidence            98888887777654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.52  E-value=1.3e-14  Score=104.81  Aligned_cols=69  Identities=22%  Similarity=0.188  Sum_probs=55.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccC-CCCCeeeCCCCCeEECccccccccCCCCCcccc------cCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNI-KLSSILFDEDHVAKLFDFSLAESIPDGETHIKD------AIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~di-k~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~------~~~~~~~~~~~PE~~~~   73 (163)
                      |+++||.|||   +.+++|||| ||.||+++.++.++|+|||+++...........      ....++..|++||.+..
T Consensus       119 ~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        119 SAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             HHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            6789999999   899999999 999999999999999999999876544322211      23456778999998864

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.50  E-value=2.8e-14  Score=95.82  Aligned_cols=157  Identities=15%  Similarity=0.176  Sum_probs=109.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC---CCeEECccccccccCCCCCccc-----ccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIK-----DAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~-----~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.-++|+|   .++++||||||+|+|.+-+   ..+.++|||+++...+..+...     .....||..|.+-....+
T Consensus       119 Qml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g  195 (341)
T KOG1163|consen  119 QMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLG  195 (341)
T ss_pred             HHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhh
Confidence            6777899999   8999999999999999655   4578999999987765433221     123458888888766666


Q ss_pred             CCCCcccceeecchhhHHHhhhcccccccc--chhhccchhhhhhhcccc-hhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECN--TFDEIVDPVIREELCIQS-SEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      ...+.+.|+=|+|.++.++-.|..|+..-.  ...+-..++.+.+...+. ..-...+.++.-.+.-|-..--++-|+..
T Consensus       196 ~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~  275 (341)
T KOG1163|consen  196 IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM  275 (341)
T ss_pred             hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence            667889999999988888777766665322  222233333333322111 11224567788888889888889999988


Q ss_pred             HHHHHHHHHhh
Q 043958          151 DVAKQLRQAYR  161 (163)
Q Consensus       151 ~i~~~L~~~~~  161 (163)
                      .+.+.++-+++
T Consensus       276 ylrqlFriLfr  286 (341)
T KOG1163|consen  276 YLRQLFRILFR  286 (341)
T ss_pred             HHHHHHHHHHh
Confidence            88877776654

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=1.2e-14  Score=111.18  Aligned_cols=150  Identities=19%  Similarity=0.167  Sum_probs=111.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCC-CCCcccccCccc-cccccCccccccCCC-C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPD-GETHIKDAIPIG-IMGFVATEYVTTGDY-N   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~-~~~~~~~~~~~~-~~~~~~PE~~~~~~~-~   77 (163)
                      |+..++.|+|.  ..++.|+|+||+|.+++.++ ..+++|||++..... .+.........| ++.|++||...+..+ .
T Consensus       131 ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~  208 (601)
T KOG0590|consen  131 QLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRG  208 (601)
T ss_pred             hhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcC
Confidence            56788999996  57899999999999999999 999999999987766 444444444567 899999999987544 5


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      ...|+||.|+++..+..+..|.........................+........+++.+++..+|+.|.+.+++.
T Consensus       209 ~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  209 PSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             CCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence            5799999999999999888876543332222222222221122333445567788999999999999999988764

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.42  E-value=1.6e-13  Score=103.65  Aligned_cols=150  Identities=20%  Similarity=0.123  Sum_probs=104.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc----cc---cCccccccccCccccccC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI----KD---AIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----~~---~~~~~~~~~~~PE~~~~~   74 (163)
                      ++++|+.|+|.  +.+++|++|.|++|.++.++..|++.|+++..........    ..   ........|.+||++.+.
T Consensus       107 ~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~  184 (700)
T KOG2137|consen  107 NVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT  184 (700)
T ss_pred             cccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc
Confidence            45689999998  7799999999999999999999999999986554322110    00   011234469999999887


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      ..+.++|+||+|++++.+..++.+-+................-.....+..+.++++++-+.+++..++..||++..+.
T Consensus       185 ~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  185 TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence            7788999999999999888666654433322111111111110112233456778999999999999999999766554

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.40  E-value=9e-14  Score=94.33  Aligned_cols=76  Identities=11%  Similarity=0.138  Sum_probs=57.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      +++.+|..+|   ..+++|+|++|+||+++.+| ++++|||...........              ..+.....+..++|
T Consensus       143 ~i~~~l~~lH---~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~d  204 (232)
T PRK10359        143 KIKASIESLH---QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNE  204 (232)
T ss_pred             HHHHHHHHHH---HcCCccCCCChHHEEEeCCC-EEEEECCCcccccchhhH--------------HHHHHHhHhccccc
Confidence            6788999999   99999999999999999998 999999987544221110              01233345667899


Q ss_pred             eeecchhhHHHhhh
Q 043958           82 VFSFAGDRHWLLNR   95 (163)
Q Consensus        82 v~s~g~~~~~l~~~   95 (163)
                      +|++|+++..+...
T Consensus       205 i~~lg~~~~~~~~k  218 (232)
T PRK10359        205 IKDLGYYLLIYKKK  218 (232)
T ss_pred             ccceeEeehHHHHH
Confidence            99999987766543

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.39  E-value=8.8e-13  Score=104.18  Aligned_cols=147  Identities=13%  Similarity=0.102  Sum_probs=99.4

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeC-------CCCCeEECccccccccCCCCCcccccCccccccccCcccccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFD-------EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~-------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~   73 (163)
                      +|++..++.||   ..+|||+||||+|+++.       .+..++|+|||.+..+.--..........+|-.+-.+|...+
T Consensus       801 ~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g  877 (974)
T KOG1166|consen  801 CQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG  877 (974)
T ss_pred             HHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC
Confidence            47899999999   99999999999999992       334589999999987765444444444567778899999999


Q ss_pred             CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      .+++...|.|.++-+++.|+-|.+--...+..+.+... ...         .....-.-+++..+|+.|-..=|...++.
T Consensus       878 rpWtYq~DyfGlAa~~h~mLFG~y~q~~~g~~~~~~~~-~~R---------y~~~~~W~~~F~~lLN~~~~~~p~l~~lr  947 (974)
T KOG1166|consen  878 RPWTYQIDYFGLAATVHVMLFGKYMEVKNGSSWMVKTN-FPR---------YWKRDMWNKFFDLLLNPDCDTLPNLQELR  947 (974)
T ss_pred             CCCchhhhhHHHHHHHHHHHHHHHHHhcCCcceecccc-chh---------hhhHHHHHHHHHHHhCcCcccchhHHHHH
Confidence            99999999999999988888776543222221111111 000         01112244455556664444446677777


Q ss_pred             HHHHHHh
Q 043958          154 KQLRQAY  160 (163)
Q Consensus       154 ~~L~~~~  160 (163)
                      ..|+..+
T Consensus       948 ~~~~~~~  954 (974)
T KOG1166|consen  948 TELEEVL  954 (974)
T ss_pred             HHHHHHH
Confidence            7776654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.35  E-value=2.8e-13  Score=90.48  Aligned_cols=99  Identities=16%  Similarity=0.066  Sum_probs=70.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccC-CCCCeeeCCCCCeEECccccccccCCCCCc----cc-------ccCccccccccCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNI-KLSSILFDEDHVAKLFDFSLAESIPDGETH----IK-------DAIPIGIMGFVATE   69 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~di-k~~nil~~~~~~~~l~dfg~~~~~~~~~~~----~~-------~~~~~~~~~~~~PE   69 (163)
                      |++.+|.++|   ..+++|||| ||.||+++.++.++|+|||++.........    ..       ......++.++.|+
T Consensus        99 qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~  175 (218)
T PRK12274         99 AARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPV  175 (218)
T ss_pred             HHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHH
Confidence            6788999999   899999999 799999999999999999999755433321    00       00122455666665


Q ss_pred             ccccC-CCC-cccceeecchhhHHHhhhcccccccc
Q 043958           70 YVTTG-DYN-EKCDVFSFAGDRHWLLNRVKKHIECN  103 (163)
Q Consensus        70 ~~~~~-~~~-~~~Dv~s~g~~~~~l~~~~~~~~~~~  103 (163)
                      .-.-. ..+ ...+.++-|.-+|.++++..+.++..
T Consensus       176 ~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        176 ERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            43322 233 35666778999999999988766543

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.35  E-value=7.9e-13  Score=96.40  Aligned_cols=112  Identities=20%  Similarity=0.173  Sum_probs=79.1

Q ss_pred             CCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccceeecchhhHHHhhhcccccccc--chh-----
Q 043958           34 HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECN--TFD-----  106 (163)
Q Consensus        34 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~--~~~-----  106 (163)
                      ..+||+|||.|......-+     .-.-|..|++||.+.+..|+..+||||++|+++||.+|-..|-...  ...     
T Consensus       391 i~vKIaDlGNACW~~khFT-----~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDH  465 (590)
T KOG1290|consen  391 IRVKIADLGNACWVHKHFT-----EDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDH  465 (590)
T ss_pred             eeEEEeeccchhhhhhhhc-----hhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHH
Confidence            4689999999865432221     1235667999999999999999999999999999999877654211  110     


Q ss_pred             -----hcc-----------------------------------chhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958          107 -----EIV-----------------------------------DPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus       107 -----~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                           +++                                   ..++..++    ..+.....++.+|+.-||+.+|++|
T Consensus       466 iA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY----~~s~e~A~~fsdFL~PmLef~PeKR  541 (590)
T KOG1290|consen  466 IALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKY----EWSEEDAQQFSDFLSPMLEFDPEKR  541 (590)
T ss_pred             HHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHh----CCCHHHHHHHHHHHHHHHhcCcccc
Confidence                 000                                   01111111    1234456789999999999999999


Q ss_pred             CCHHHHHH
Q 043958          147 PTMIDVAK  154 (163)
Q Consensus       147 pt~~~i~~  154 (163)
                      ||+.++++
T Consensus       542 ~tA~~cl~  549 (590)
T KOG1290|consen  542 PTAAQCLK  549 (590)
T ss_pred             ccHHHHhc
Confidence            99999985

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.23  E-value=7.8e-12  Score=83.33  Aligned_cols=44  Identities=18%  Similarity=0.285  Sum_probs=40.0

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCC
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD   49 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~   49 (163)
                      |++.++.++|   . .+++||||||.||+++ ++.++++|||++.....
T Consensus       125 ~l~~~l~~lH---~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145         125 QVVEQMRRLY---QEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             HHHHHHHHHH---HhCCEecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence            6889999999   7 9999999999999999 88999999999976643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.19  E-value=1.1e-11  Score=82.52  Aligned_cols=42  Identities=14%  Similarity=0.246  Sum_probs=37.6

Q ss_pred             hHHHHHHHH-hcCCCCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958            2 EIANALAYL-HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus         2 qi~~~l~~l-h~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      |++.+|.++ |   +.+++|||+||.||+++ ++.++++|||++...
T Consensus       125 qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         125 QVIQIMRILYQ---DCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             HHHHHHHHHHH---hCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence            688999999 7   78999999999999998 478999999998544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.03  E-value=1.7e-10  Score=79.51  Aligned_cols=43  Identities=26%  Similarity=0.342  Sum_probs=39.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      |++.+|.+||   ..+++|+|+||.|||++.++.++++|||.+...
T Consensus       150 ~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~  192 (239)
T PRK01723        150 AIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence            6889999999   899999999999999999999999999988554

>smart00090 RIO RIO-like kinase

Probab=99.00  E-value=2.9e-10  Score=78.23  Aligned_cols=43  Identities=19%  Similarity=0.250  Sum_probs=38.8

Q ss_pred             hHHHHHHHHhcCCCCC-eEeccCCCCCeeeCCCCCeEECccccccccC
Q 043958            2 EIANALAYLHVGFPRP-IVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~-~~H~dik~~nil~~~~~~~~l~dfg~~~~~~   48 (163)
                      |++.++.+||   ..+ ++|+|+||+||+++ ++.++++|||.+....
T Consensus       156 qi~~~l~~LH---~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      156 DILEEMRKLY---KEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             HHHHHHHHHH---hcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            6889999999   889 99999999999999 8889999999885443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.00  E-value=4.8e-10  Score=78.90  Aligned_cols=145  Identities=19%  Similarity=0.246  Sum_probs=90.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCC--CCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD--GETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||.|||.. +.+++|+++.-+.+++..+|.+|+.--.....-..  ...........+-++|.+||+=..-+.+..
T Consensus       184 qIlsal~yLhs~-~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a  262 (458)
T KOG1266|consen  184 QILSALSYLHSC-DPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGA  262 (458)
T ss_pred             HHHhhhhhhhcc-CCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccc
Confidence            789999999954 78999999999999999999888743211111111  111111122345678899987665667779


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|||+||+-..++..+.-.+-.+.. ...+.... .+..+....     ..-+.++.+|++-.|..||++++++.
T Consensus       263 ~dIy~fgmcAlemailEiq~tnseS-~~~~ee~i-a~~i~~len-----~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  263 SDIYKFGMCALEMAILEIQSTNSES-KVEVEENI-ANVIIGLEN-----GLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             hhhhhhhHHHHHHHHheeccCCCcc-eeehhhhh-hhheeeccC-----ccccCcCcccccCCCCCCcchhhhhc
Confidence            9999999766776655433222111 11111111 111111111     12346789999999999999998764

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.00  E-value=2.7e-10  Score=84.97  Aligned_cols=139  Identities=21%  Similarity=0.192  Sum_probs=102.1

Q ss_pred             HHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccc---cCccccccccCccccccCCCCcccc
Q 043958            6 ALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKD---AIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         6 ~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~---~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||.++|   ..+++|-|+||.|++...+ ...++.|||+...+....-....   -...+...|++||... +-++.+.|
T Consensus       234 al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~d  309 (524)
T KOG0601|consen  234 ALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASD  309 (524)
T ss_pred             cccccC---CCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhh
Confidence            899999   9999999999999999998 88999999999877665422211   1225667899999665 56788999


Q ss_pred             eeecchhhHHHhhhccccccc--cchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIEC--NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|++|.++.+...+...+...  ..+.++-...+..      ......+.++...+.++++.+|-.|++...+.+
T Consensus       310 i~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~------e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  310 IFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL------EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             hcchhhhhHhhHhhcccccCCCCCCccccccccCch------hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            999999999988887776544  3333322222221      222234455666899999999999999887654

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.99  E-value=4.4e-10  Score=75.33  Aligned_cols=45  Identities=20%  Similarity=0.261  Sum_probs=40.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD   49 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~   49 (163)
                      +++.++.++|   ..+++|+||+|.||+++.++.++++|||.+.....
T Consensus       133 ~i~~~l~~lh---~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         133 EILEEIVKAY---KHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             HHHHHHHHHH---HCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            5788999999   89999999999999999999999999999855443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.88  E-value=1.5e-09  Score=71.95  Aligned_cols=44  Identities=23%  Similarity=0.255  Sum_probs=39.4

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCC
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD   49 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~   49 (163)
                      +++.++.++|   . .+++|+|+||+||+++ ++.++++|||.+.....
T Consensus       122 ~~~~~l~~lh---~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         122 QILELMRKLY---REAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             HHHHHHHHHh---hccCcCcCCCChhhEEEE-CCcEEEEECcccccccC
Confidence            5788999999   7 9999999999999999 88999999999865543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>PRK10345 hypothetical protein; Provisional

Probab=98.84  E-value=2.1e-09  Score=72.52  Aligned_cols=40  Identities=23%  Similarity=0.218  Sum_probs=32.8

Q ss_pred             hHHHHH-HHHhcCCCCCeEeccCCCCCeeeCCC----CCeEECccccc
Q 043958            2 EIANAL-AYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLA   44 (163)
Q Consensus         2 qi~~~l-~~lh~~~~~~~~H~dik~~nil~~~~----~~~~l~dfg~~   44 (163)
                      |++.++ +|||   +.+|+||||||+||+++..    +.++|+||+.+
T Consensus       112 ~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        112 QLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            556677 8999   9999999999999999743    37999995433

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.83  E-value=2.9e-08  Score=72.46  Aligned_cols=154  Identities=21%  Similarity=0.164  Sum_probs=104.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-----CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-----DY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-----~~   76 (163)
                      .++.+.+-||   ..|..-+|++++|+|+++++.+.+.|-.....-. +.  .......|...|++||...-+     .-
T Consensus       125 nlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~-ng--~~~~cpVg~~eftPPElQ~~~sf~g~~r  198 (637)
T COG4248         125 NLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA-NG--TLHLCPVGVSEFTPPELQTLPSFVGFER  198 (637)
T ss_pred             HHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceeecc-CC--ceEecccCccccCCHHHhccccccccCC
Confidence            3678889999   8999999999999999999999998855432222 21  122234688899999966522     34


Q ss_pred             CcccceeecchhhHHHhhh-cccccc-------ccchh-h-----cc---chhhhhhhcccchhhHHHHHHHHHHHHhcc
Q 043958           77 NEKCDVFSFAGDRHWLLNR-VKKHIE-------CNTFD-E-----IV---DPVIREELCIQSSEKDKQVQAFVELAVKCV  139 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~-~~~~~~-------~~~~~-~-----~~---~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  139 (163)
                      +...|.|.+|+++++++-+ .+||..       ..+.+ .     ..   +........+......-.+++++.+..+|+
T Consensus       199 ~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF  278 (637)
T COG4248         199 TANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAF  278 (637)
T ss_pred             CccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHh
Confidence            5679999999999998876 444432       01111 0     00   111111222334445566788999999999


Q ss_pred             ccC--cCCCCCHHHHHHHHHHHhh
Q 043958          140 SES--AEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus       140 ~~~--p~~Rpt~~~i~~~L~~~~~  161 (163)
                      ...  +.-|||++..+..|..+-+
T Consensus       279 ~~~~~~~~RP~a~aW~aAl~al~~  302 (637)
T COG4248         279 TESGVATPRPTAKAWVAALDALRQ  302 (637)
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHH
Confidence            765  4689999998888877644

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.79  E-value=4.2e-09  Score=83.58  Aligned_cols=143  Identities=15%  Similarity=0.132  Sum_probs=105.9

Q ss_pred             HHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCC--------C----------------Cc-----
Q 043958            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG--------E----------------TH-----   53 (163)
Q Consensus         3 i~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~--------~----------------~~-----   53 (163)
                      +..+++|||   ...+.|+|++|.|.+...++..++.+|+........        .                ..     
T Consensus       913 ~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~  989 (1205)
T KOG0606|consen  913 RVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEA  989 (1205)
T ss_pred             HHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchh
Confidence            457889999   777999999999999999999999999844322100        0                00     


Q ss_pred             ccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHH
Q 043958           54 IKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVE  133 (163)
Q Consensus        54 ~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (163)
                      .......++..|.+||...+..-...+|.|++|+.+++.+++..|+. ....+++++.+...... -.......+...++
T Consensus       990 ~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n-a~tpq~~f~ni~~~~~~-~p~g~~~~s~~aq~ 1067 (1205)
T KOG0606|consen  990 RRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN-AETPQQIFENILNRDIP-WPEGPEEGSYEAQD 1067 (1205)
T ss_pred             hccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC-CcchhhhhhccccCCCC-CCCCccccChhhhh
Confidence            00123468889999999998888889999999999999999977764 55556666555544432 12233456678999


Q ss_pred             HHHhccccCcCCCCCHH
Q 043958          134 LAVKCVSESAEDRPTMI  150 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~  150 (163)
                      ++...+..+|.+|..+.
T Consensus      1068 ~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1068 LINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhccCchhccCcc
Confidence            99999999999997654

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.79  E-value=6e-09  Score=69.79  Aligned_cols=41  Identities=32%  Similarity=0.451  Sum_probs=37.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      |++.+|.++|   ..+++|+|++|.||+++ ++.+++.|||++..
T Consensus        98 ~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        98 EIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             HHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            6789999999   89999999999999999 78999999998744

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.77  E-value=5.3e-09  Score=78.26  Aligned_cols=142  Identities=17%  Similarity=0.092  Sum_probs=96.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccccCcccccccc--CccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFV--ATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~--~PE~~~~~~~~~   78 (163)
                      |++.++.++|   ++.++|+|++|+||++..+ +..++.|||....+......     ....-++.  ++.......+..
T Consensus       374 q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~-----~~~~~r~~p~~~~~~e~~~~~~  445 (524)
T KOG0601|consen  374 QILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGV-----FHHIDRLYPIAEILLEDYPHLS  445 (524)
T ss_pred             HHHhcccccc---chhhhcccccccceeeccchhhhhccccccccccceeccc-----ccccccccccchhhcccccccc
Confidence            6788999999   9999999999999999775 78899999987542211111     11222333  444444556788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      +.|++|+|..+.+.+++............+.......        .......++.+.+.+...++..||.+.++....+-
T Consensus       446 ~~~~~sl~~~~~e~~~~~~ls~~~~~~~~i~~~~~p~--------~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~  517 (524)
T KOG0601|consen  446 KADIFSLGLSVDEAITGSPLSESGVQSLTIRSGDTPN--------LPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF  517 (524)
T ss_pred             ccccccccccccccccCcccCcccccceeeecccccC--------CCchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence            9999999999888887765544333333322221111        11222567788888999999999999887765544


Q ss_pred             H
Q 043958          159 A  159 (163)
Q Consensus       159 ~  159 (163)
                      .
T Consensus       518 ~  518 (524)
T KOG0601|consen  518 Y  518 (524)
T ss_pred             h
Confidence            3

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.76  E-value=4.4e-09  Score=80.53  Aligned_cols=42  Identities=26%  Similarity=0.402  Sum_probs=38.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      |++.+|.+||   ..+++|||+||+||++ .++.++++|||+++..
T Consensus       436 ~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        436 KVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             HHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            6889999999   8999999999999999 6778999999998553

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.73  E-value=9.1e-09  Score=69.50  Aligned_cols=41  Identities=29%  Similarity=0.445  Sum_probs=37.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      +++.+|.++|   ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus       103 ~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        103 EIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            5788999999   89999999999999999 78899999998743

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.73  E-value=2.8e-08  Score=75.66  Aligned_cols=88  Identities=19%  Similarity=0.149  Sum_probs=63.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||+  +.+++|+|+.-+.++++..|..||++|.++........  ........-.|..|+.+....  -..|
T Consensus       112 qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~--~s~D  185 (690)
T KOG1243|consen  112 QILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE--WSID  185 (690)
T ss_pred             HHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--cchh
Confidence            78999999987  77999999999999999999999999988754433221  000111222355665443221  3469


Q ss_pred             eeecchhhHHHhhh
Q 043958           82 VFSFAGDRHWLLNR   95 (163)
Q Consensus        82 v~s~g~~~~~l~~~   95 (163)
                      .|.||+++++++.+
T Consensus       186 ~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  186 SWGLGCLIEELFNG  199 (690)
T ss_pred             hhhHHHHHHHHhCc
Confidence            99999999999988

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.57  E-value=7.5e-08  Score=61.10  Aligned_cols=45  Identities=22%  Similarity=0.299  Sum_probs=38.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      +++++++++|.....+++|+|++|.||+++..+.+++.|||.+..
T Consensus        94 ~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          94 QLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            567899999943235799999999999999989999999998743

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.40  E-value=3.4e-07  Score=59.61  Aligned_cols=40  Identities=30%  Similarity=0.417  Sum_probs=34.8

Q ss_pred             hHHHHHHHHhcCCCCC-----eEeccCCCCCeeeCCCCCeEECcccccc
Q 043958            2 EIANALAYLHVGFPRP-----IVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~-----~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      +++.+|+.||   ..+     ++|+|++|.||+++ ++.++++||+.+.
T Consensus        91 ~l~~~l~~LH---~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~  135 (170)
T cd05151          91 KIAKLLKKLH---SSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             HHHHHHHHHh---CCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence            5788999999   665     59999999999999 6679999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.37  E-value=3.2e-07  Score=61.24  Aligned_cols=42  Identities=14%  Similarity=0.211  Sum_probs=35.6

Q ss_pred             hHHHHHHHH-hcCCCCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958            2 EIANALAYL-HVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus         2 qi~~~l~~l-h~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      |++.+|..+ |   ..+++|+|+++.||+++ ++.+.++|||.+...
T Consensus       132 ~i~~~l~~l~H---~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~  174 (197)
T cd05146         132 QVLSMMKQLYK---ECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHHHHHHHHH---hCCeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence            567788888 8   88999999999999997 467999999987544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.15  E-value=2.8e-06  Score=63.65  Aligned_cols=40  Identities=13%  Similarity=0.185  Sum_probs=35.9

Q ss_pred             HHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccC
Q 043958            6 ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (163)
Q Consensus         6 ~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~   48 (163)
                      .+..+|   ..+++|+|++|.||+++.++.+++.|||++..+.
T Consensus       269 ~l~ql~---~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       269 FLNQVL---RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHHH---hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            356788   8899999999999999999999999999987665

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.03  E-value=2.8e-06  Score=63.00  Aligned_cols=30  Identities=23%  Similarity=0.445  Sum_probs=26.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED   33 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~   33 (163)
                      ||+.||.|||.  ..+|||.||||+|||+..+
T Consensus       195 qvL~GLdYLH~--ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  195 QVLTGLDYLHR--ECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHHHHHHHH--hcCccccCCCcceeeeecc
Confidence            78999999998  5599999999999999544

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.96  E-value=6.3e-06  Score=55.69  Aligned_cols=43  Identities=28%  Similarity=0.298  Sum_probs=37.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC---CeEECcccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESI   47 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~---~~~l~dfg~~~~~   47 (163)
                      +++..++-||   ..+++|+|+++.|||++.++   .+.++||+.++..
T Consensus       126 ~l~~~i~~lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~  171 (206)
T PF06293_consen  126 ALARLIAKLH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR  171 (206)
T ss_pred             HHHHHHHHHH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence            4677899999   99999999999999998887   7889999977544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.94  E-value=6.9e-06  Score=57.62  Aligned_cols=41  Identities=17%  Similarity=0.269  Sum_probs=35.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-------CCCeEECcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-------DHVAKLFDFSLAE   45 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-------~~~~~l~dfg~~~   45 (163)
                      +++..+.-||   ..|++|+|++++|||++.       +..+.++||+.+.
T Consensus       146 ~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        146 RVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            4678899999   899999999999999975       4678999999774

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.89  E-value=3.2e-05  Score=51.41  Aligned_cols=36  Identities=28%  Similarity=0.374  Sum_probs=28.0

Q ss_pred             HHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccC
Q 043958            9 YLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (163)
Q Consensus         9 ~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~   48 (163)
                      -+|   ..+++|+|+++.||+++.+ .+.++|||.+....
T Consensus       122 ~~~---~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  122 MLH---KAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHH---CTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             HHH---hcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            468   8899999999999999888 89999999875443

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.88  E-value=1.8e-05  Score=52.02  Aligned_cols=36  Identities=28%  Similarity=0.453  Sum_probs=31.6

Q ss_pred             HHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958            6 ALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus         6 ~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      -+.-||   ..+|+|+|+.++||+++..+ +.++|||++.
T Consensus       104 ~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~  139 (204)
T COG3642         104 LVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGE  139 (204)
T ss_pred             HHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCccc
Confidence            466799   89999999999999998776 7888999974

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.71  E-value=6.4e-05  Score=49.59  Aligned_cols=38  Identities=29%  Similarity=0.479  Sum_probs=32.0

Q ss_pred             HHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC---eEECccccc
Q 043958            4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLA   44 (163)
Q Consensus         4 ~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~---~~l~dfg~~   44 (163)
                      -+.+.-||   ...++|+|+.++||++..++.   +.+.|||++
T Consensus       123 G~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen  123 GELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             HHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecch
Confidence            35678899   899999999999999966653   478999987

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.59  E-value=4.6e-05  Score=58.41  Aligned_cols=34  Identities=15%  Similarity=0.221  Sum_probs=31.0

Q ss_pred             CCCeEeccCCCCCeeeCCCC----CeEECccccccccC
Q 043958           15 PRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIP   48 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~----~~~l~dfg~~~~~~   48 (163)
                      ..+++|+|++|.||+++.++    .+++.|||+....+
T Consensus       278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            67999999999999999888    89999999987664

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.56  E-value=7.5e-05  Score=50.68  Aligned_cols=39  Identities=15%  Similarity=0.221  Sum_probs=34.1

Q ss_pred             HHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958            3 IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus         3 i~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      +++++.-+|   ..|+.|+|..|.|++++.++ +++.||+..+
T Consensus       144 i~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i~iID~~~k~  182 (229)
T PF06176_consen  144 IVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-IRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHH---HcCCccCCCCcCcEEEECCc-EEEEECcccc
Confidence            677899999   89999999999999998665 8899998654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK09902 hypothetical protein; Provisional

Probab=97.09  E-value=0.00044  Score=46.74  Aligned_cols=40  Identities=15%  Similarity=0.146  Sum_probs=35.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC--eEECccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLA   44 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~--~~l~dfg~~   44 (163)
                      +++..++-||   ..++.|+|+-+.||+++.++.  +.++||--+
T Consensus       136 ~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~  177 (216)
T PRK09902        136 AVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS  177 (216)
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence            5778999999   899999999999999987777  888898654

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.73  E-value=0.0015  Score=45.78  Aligned_cols=30  Identities=30%  Similarity=0.342  Sum_probs=27.3

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..|++|+|+++-||+++++|.+.++||--+
T Consensus       220 ~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         220 RRGIVHGDLSEFNILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             HcCccccCCchheEEEecCCCEEEEeCccc
Confidence            579999999999999999999999999644

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=96.70  E-value=0.0019  Score=53.37  Aligned_cols=134  Identities=18%  Similarity=0.239  Sum_probs=82.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCC---CeeeCCCCCeEEC--ccccccccCCCCCcccccCccccccccCccccccCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLS---SILFDEDHVAKLF--DFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~---nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~   76 (163)
                      +...||+|+|   +....|.-+..+   +...+..+.....  ||+..+...........   .....+-++|......+
T Consensus       294 ~~~~GL~~~h---~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~---~~~~~~~~~e~~~~~~~  367 (1351)
T KOG1035|consen  294 KLLEGLAYLH---SLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSD---LLAEIRNADEDLKENTA  367 (1351)
T ss_pred             HHhhhHHHHH---HhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhh---cCccccccccccccccc
Confidence            4678999999   565555555555   3334555556655  77776655544332221   23445667777665554


Q ss_pred             Cc--ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NE--KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~--~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ..  ..|+|.+|.....+..+............++....              .....+...+|+..++++|+++.+++.
T Consensus       368 ~~~r~~dL~~lgll~~~~~~~~~i~~~~~~~~~~l~~~~--------------~~~~~d~~~~~~~~~~~~Rl~~~~ll~  433 (1351)
T KOG1035|consen  368 KKSRLTDLWCLGLLLLQLSQGEDISEKSAVPVSLLDVLS--------------TSELLDALPKCLDEDSEERLSALELLT  433 (1351)
T ss_pred             hhhhhhHHHHHHHHHhhhhhcCcccccccchhhhhcccc--------------chhhhhhhhhhcchhhhhccchhhhhh
Confidence            44  47999999988887776655432222222111110              014667788999999999999988876


Q ss_pred             H
Q 043958          155 Q  155 (163)
Q Consensus       155 ~  155 (163)
                      .
T Consensus       434 ~  434 (1351)
T KOG1035|consen  434 H  434 (1351)
T ss_pred             c
Confidence            4

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.45  E-value=0.0017  Score=50.54  Aligned_cols=83  Identities=24%  Similarity=0.218  Sum_probs=62.0

Q ss_pred             HHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccceee
Q 043958            5 NALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFS   84 (163)
Q Consensus         5 ~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s   84 (163)
                      ++++++|   +..-+|+|    ||+.++ +..+..+|+....++...   ......++..+++||....+.+..+.|.|+
T Consensus       347 ~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~  415 (829)
T KOG0576|consen  347 RPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGS  415 (829)
T ss_pred             ccccccc---cccccCcc----cccccc-cccccccccCCcccCccc---ccccCCCCCCCCCchhhcccccccCCCccC
Confidence            5788888   44457777    666554 678899999886665554   223457889999999998888999999999


Q ss_pred             cchhhHHHhhhccc
Q 043958           85 FAGDRHWLLNRVKK   98 (163)
Q Consensus        85 ~g~~~~~l~~~~~~   98 (163)
                      +++-..++..+..|
T Consensus       416 ~~~~~~~~ap~~pP  429 (829)
T KOG0576|consen  416 LAVSAIQMAPGLPP  429 (829)
T ss_pred             CCcchhhcCCCCCC
Confidence            99866666655544

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=96.35  E-value=0.004  Score=43.15  Aligned_cols=44  Identities=20%  Similarity=0.239  Sum_probs=33.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIP   48 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~   48 (163)
                      ++++.+.-|-.  ..+++|+|++.-|||+. ++.+.++|||-+....
T Consensus       174 ~~v~~~~~l~~--~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         174 DVVEYMRRLYK--EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             HHHHHHHHHHH--hcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence            34555555552  37999999999999999 7789999999774443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=96.34  E-value=0.0031  Score=42.57  Aligned_cols=31  Identities=26%  Similarity=0.503  Sum_probs=26.6

Q ss_pred             CCCeEeccCCCCCeeeCC--CCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDE--DHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~--~~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.||+++.  ++.+.++||+.+.
T Consensus       173 ~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~  205 (223)
T cd05154         173 RPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT  205 (223)
T ss_pred             CcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence            467899999999999988  5667899998763

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.04  E-value=0.0081  Score=41.23  Aligned_cols=39  Identities=18%  Similarity=0.137  Sum_probs=33.1

Q ss_pred             HHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECcccc
Q 043958            4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL   43 (163)
Q Consensus         4 ~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~   43 (163)
                      +.+|.-.|++ ..+.+|+|..|+||+-++.|.+|+.|=+.
T Consensus       151 i~~L~~fH~~-~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  151 IKDLMDFHSE-NQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHHhhcc-CCCeecCCCChhheeecCCCCEEecChhh
Confidence            3567777865 67899999999999999999999999654

The function of this family is unknown.

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=96.02  E-value=0.0057  Score=42.13  Aligned_cols=30  Identities=13%  Similarity=0.351  Sum_probs=25.5

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ...++|+|+.+.|++++.++...|.||+.+
T Consensus       163 ~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a  192 (235)
T cd05155         163 PPVWFHGDLAPGNLLVQDGRLSAVIDFGCL  192 (235)
T ss_pred             CceEEeCCCCCCcEEEECCCEEEEEeCccc
Confidence            456899999999999987766679999976

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=95.99  E-value=0.008  Score=43.14  Aligned_cols=30  Identities=33%  Similarity=0.651  Sum_probs=26.9

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..+++|+|+.+.|++++.++.+.+.||+.+
T Consensus       186 ~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~  215 (307)
T TIGR00938       186 PRGVIHADLFPDNVLFDGDSVKGVIDFYFA  215 (307)
T ss_pred             CCccCCCCCCcCcEEEECCceEEEeecccc
Confidence            478999999999999998887789999876

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=95.94  E-value=0.0049  Score=44.38  Aligned_cols=30  Identities=27%  Similarity=0.640  Sum_probs=25.9

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..+++|+|+.+.||+++.+....+.||+.+
T Consensus       186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~  215 (319)
T PRK05231        186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFA  215 (319)
T ss_pred             CcccCCCCCCCCcEEEECCceEEEEecccc
Confidence            458999999999999987766689999876

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=95.61  E-value=0.042  Score=42.18  Aligned_cols=122  Identities=9%  Similarity=0.072  Sum_probs=78.2

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      +|+..||.++|   +.|+.-+-+.+.+|+++.+..++++.-|+........              .+|  +.   -.++-
T Consensus       400 ~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~--------------~~~--le---~~Qq~  457 (655)
T KOG3741|consen  400 SQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP--------------TEP--LE---SQQQN  457 (655)
T ss_pred             HHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEecccceeeecCCC--------------Ccc--hh---HHhhh
Confidence            48899999999   8899999999999999888888887666543332221              011  21   12356


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      |.=.||.++..|.++...-......++.-..          .-....+.++++++.-.....+++ -++.+++..
T Consensus       458 D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~----------~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  458 DLRDLGLLLLALATGTENSNRTDSTQSSHLT----------RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             hHHHHHHHHHHHhhcccccccccchHHHHHH----------HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHH
Confidence            7778999999999885542222211111000          112345667778888888777776 566666654

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=95.56  E-value=0.012  Score=40.37  Aligned_cols=29  Identities=3%  Similarity=0.118  Sum_probs=25.4

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ...++|+|+.|.|++++.++ +.++||+.+
T Consensus       152 ~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a  180 (226)
T TIGR02172       152 TSTCLHGDFQIGNLITSGKG-TYWIDLGDF  180 (226)
T ss_pred             CCceEecCCCCCcEEEcCCC-cEEEechhc
Confidence            34678999999999999888 889999876

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.52  E-value=0.013  Score=41.84  Aligned_cols=30  Identities=23%  Similarity=0.357  Sum_probs=26.6

Q ss_pred             CCCeEeccCCCCCeeeCCC----CCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDED----HVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~----~~~~l~dfg~~   44 (163)
                      ...++|+|+.+.||+++.+    +.+.++||..+
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya  211 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYA  211 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCCcEEEEeeCCC
Confidence            5678999999999999874    78999999876

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=95.51  E-value=0.0088  Score=42.56  Aligned_cols=29  Identities=28%  Similarity=0.593  Sum_probs=26.1

Q ss_pred             CCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      .+++|+|+.|.|++++.++.+.|.||+.+
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a  203 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFA  203 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhh
Confidence            57999999999999998877789999876

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=95.40  E-value=0.0086  Score=40.67  Aligned_cols=30  Identities=27%  Similarity=0.453  Sum_probs=20.7

Q ss_pred             CCCeEeccCCCCCeeeC-CCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFD-EDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~-~~~~~~l~dfg~~   44 (163)
                      ...++|+|+.+.||+++ .++.+.+.||+.+
T Consensus       165 ~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a  195 (239)
T PF01636_consen  165 PPVLIHGDLHPGNILVDPSDGRIGIIDFEDA  195 (239)
T ss_dssp             CEEEE-SS-SGGGEEEESSTTEEEE--GTT-
T ss_pred             CcEEEEeccccccceeeeccceeEEEecccc
Confidence            56799999999999999 5565579999865

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=95.39  E-value=0.019  Score=38.27  Aligned_cols=45  Identities=16%  Similarity=0.108  Sum_probs=37.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      ++++.+.+++......+.-.|++++|+-++.++.+|+.|...+..
T Consensus        67 ~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   67 QLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             HHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcch
Confidence            567778888865556788999999999999999999999887633

Proteins in this uncharacterised family are described as transmembrane proteins.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=95.33  E-value=0.013  Score=40.54  Aligned_cols=30  Identities=13%  Similarity=0.221  Sum_probs=26.3

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ...++|+|+.|.||+++.++.+.|+||+.+
T Consensus       162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a  191 (244)
T cd05150         162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRL  191 (244)
T ss_pred             ceEEECCCCCCccEEEeCCcEEEEEEcccc
Confidence            456899999999999998877889999866

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=95.27  E-value=0.016  Score=39.78  Aligned_cols=30  Identities=20%  Similarity=0.493  Sum_probs=26.0

Q ss_pred             CCCeEeccCCCCCeeeCC-CCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDE-DHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~-~~~~~l~dfg~~   44 (163)
                      ...++|+|+.+.||+++. ++.+.++||..+
T Consensus       169 ~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a  199 (235)
T cd05157         169 PIVFCHNDLLSGNIIYNEEKNSVKFIDYEYA  199 (235)
T ss_pred             CEEEEcCCCCcCcEEEeCCCCCEEEEEcccC
Confidence            356899999999999997 577999999866

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.15  E-value=0.017  Score=38.46  Aligned_cols=29  Identities=10%  Similarity=0.260  Sum_probs=24.8

Q ss_pred             CCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ...+|+|+.|.|++++.++ ++++||+.+.
T Consensus        77 ~~p~H~D~~~~N~~~~~~~-~~lIDwe~a~  105 (188)
T PRK10271         77 LAPLHMDVHAGNLVHSASG-LRLIDWEYAG  105 (188)
T ss_pred             eeeecCCCCCccEEEECCC-EEEEeCCccc
Confidence            3558999999999998877 8899999773

>TIGR02721 ycfN_thiK thiamine kinase

Probab=94.96  E-value=0.021  Score=39.86  Aligned_cols=28  Identities=14%  Similarity=0.253  Sum_probs=24.5

Q ss_pred             CCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..++|+|+.|.||+++.++ +.++||..+
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a  173 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYA  173 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC-CEEEecccc
Confidence            4689999999999999877 689999876

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=94.92  E-value=0.026  Score=43.49  Aligned_cols=35  Identities=17%  Similarity=0.242  Sum_probs=31.4

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccccccCC
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD   49 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~   49 (163)
                      ..++.|.|..|.||+++.+|.+.+.|||+...+..
T Consensus       283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             hcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            56999999999999999999999999999876653

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=94.63  E-value=0.031  Score=40.86  Aligned_cols=17  Identities=18%  Similarity=0.170  Sum_probs=15.1

Q ss_pred             CCCeEeccCCCCCeeeC
Q 043958           15 PRPIVFKNIKLSSILFD   31 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~   31 (163)
                      ..+++|-||||+|||+-
T Consensus       297 c~nF~H~DLKPdNILiF  313 (434)
T PF05445_consen  297 CTNFLHVDLKPDNILIF  313 (434)
T ss_pred             cceeeecccCcCcEEEe
Confidence            46899999999999993

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=94.61  E-value=0.028  Score=40.24  Aligned_cols=29  Identities=17%  Similarity=0.354  Sum_probs=24.9

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..+++|+|+.+.|++++. +.+.+.||+.+
T Consensus       186 ~~~liHgD~~~~Nil~~~-~~i~lIDfd~~  214 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKD-NEVYVIDFDYC  214 (313)
T ss_pred             cCceEcCCCCcccEEEeC-CcEEEEECccc
Confidence            368899999999999987 56789999865

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.46  E-value=0.029  Score=37.98  Aligned_cols=29  Identities=28%  Similarity=0.448  Sum_probs=20.7

Q ss_pred             CCeEeccCCCCCeee-CCCCCeEECccccc
Q 043958           16 RPIVFKNIKLSSILF-DEDHVAKLFDFSLA   44 (163)
Q Consensus        16 ~~~~H~dik~~nil~-~~~~~~~l~dfg~~   44 (163)
                      ..+.|.|+.+.||++ +.++.++++||..+
T Consensus       143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya  172 (211)
T PF01633_consen  143 LVFCHNDLNPGNILINNKDGEVKLIDFEYA  172 (211)
T ss_dssp             EEEE-S--SGGGEEETSSSSCEEE--GTT-
T ss_pred             ceEeeccCccccEEeccCCCeEEEecHHHH
Confidence            467899999999999 88899999999876

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=94.28  E-value=0.038  Score=39.19  Aligned_cols=30  Identities=30%  Similarity=0.429  Sum_probs=24.6

Q ss_pred             CCCeEeccCCCCCeeeCCCCC-eEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHV-AKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~-~~l~dfg~~   44 (163)
                      ...++|+|+.+.||+++.++. .-|.||+.+
T Consensus       184 ~~~lvHGD~~~~Nilv~~~~~~~gviDWe~a  214 (276)
T cd05152         184 HTVLVHGDLHPGHILIDEDARVTGLIDWTEA  214 (276)
T ss_pred             CCeeEeCCCCCCcEEEeCCCCEEEEECcHhc
Confidence            346899999999999987554 568999976

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.04  E-value=0.048  Score=39.69  Aligned_cols=27  Identities=30%  Similarity=0.583  Sum_probs=24.4

Q ss_pred             eEeccCCCCCeeeCCCCC-eEECccccc
Q 043958           18 IVFKNIKLSSILFDEDHV-AKLFDFSLA   44 (163)
Q Consensus        18 ~~H~dik~~nil~~~~~~-~~l~dfg~~   44 (163)
                      +||+|+.|.|++++.+.. +.+.||+-+
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa  226 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDA  226 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEcccc
Confidence            999999999999988874 889999976

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=93.93  E-value=0.059  Score=36.11  Aligned_cols=30  Identities=23%  Similarity=0.354  Sum_probs=24.5

Q ss_pred             CCCeEeccCCCCCeeeCCCC-----CeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDH-----VAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~-----~~~l~dfg~~   44 (163)
                      ...++|+|+.+.|+++..++     .+.+.||..+
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~  153 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLS  153 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccC
Confidence            45789999999999997543     5788899865

subfamily of choline kinases

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=93.83  E-value=0.056  Score=39.13  Aligned_cols=33  Identities=18%  Similarity=0.348  Sum_probs=28.8

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      ...++|+|+.+.|++++..+.+-|.||+.+..-
T Consensus       197 ~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG  229 (321)
T COG3173         197 PPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG  229 (321)
T ss_pred             CceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence            457899999999999999988999999987543

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=93.59  E-value=0.04  Score=39.62  Aligned_cols=30  Identities=27%  Similarity=0.430  Sum_probs=27.0

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..+++|+|+.++|++++.++.+.++||..+
T Consensus       195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~  224 (309)
T TIGR02904       195 RTVLVHGKLSLSHFLYDETRGGYFINFEKA  224 (309)
T ss_pred             ceeeeCCCCcHHhEEEcCCCCEEEEEhhhc
Confidence            458999999999999999988999999876

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02236 choline kinase

Probab=93.54  E-value=0.062  Score=39.37  Aligned_cols=31  Identities=16%  Similarity=0.404  Sum_probs=26.2

Q ss_pred             CCCeEeccCCCCCeeeCC-CCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDE-DHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~   45 (163)
                      ...++|+|+++.||+++. ++.+.++||..+.
T Consensus       199 ~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        199 EIGFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             CceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            457899999999999975 4679999998774

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.45  E-value=0.067  Score=37.83  Aligned_cols=29  Identities=14%  Similarity=0.204  Sum_probs=26.3

Q ss_pred             CCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      .-++|.|+.+.|++.+..+.++++||.-|
T Consensus       153 ~v~cH~Dl~~~N~l~t~~~~l~LIDWEyA  181 (269)
T COG0510         153 LVPCHNDLNPGNLLLTDKGGLFLIDWEYA  181 (269)
T ss_pred             eeeecCCCCccceEEcCCCcEEEEecccC
Confidence            35899999999999999899999999876

>PHA03111 Ser/Thr kinase; Provisional

Probab=92.61  E-value=0.16  Score=37.15  Aligned_cols=18  Identities=17%  Similarity=0.209  Sum_probs=15.5

Q ss_pred             CCCeEeccCCCCCeeeCC
Q 043958           15 PRPIVFKNIKLSSILFDE   32 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~   32 (163)
                      ..+++|-||||+|||+-.
T Consensus       301 c~nF~H~DLKPdNILiFd  318 (444)
T PHA03111        301 CDNFLHVDLKPDNILIFD  318 (444)
T ss_pred             cceeeeccCCCCcEEEec
Confidence            468999999999999933

>PRK06148 hypothetical protein; Provisional

Probab=92.23  E-value=0.12  Score=43.40  Aligned_cols=32  Identities=28%  Similarity=0.400  Sum_probs=25.9

Q ss_pred             CCCeEeccCCCCCeeeCCCC--Ce-EECccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDH--VA-KLFDFSLAES   46 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~--~~-~l~dfg~~~~   46 (163)
                      ...+||.|+.+.||+++.++  .+ -|+|||-+..
T Consensus       202 p~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        202 PAQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             CcceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            45799999999999998775  34 4899998743

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=91.94  E-value=0.32  Score=36.50  Aligned_cols=30  Identities=20%  Similarity=0.335  Sum_probs=25.5

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.||+++.+ .++++|+-++.
T Consensus       222 ~~~l~HgDl~~gni~~~~~-~~~viD~E~a~  251 (401)
T PRK09550        222 AEALLHGDLHTGSIFVTEE-ETKVIDPEFAF  251 (401)
T ss_pred             CCceeeccCCcccEEeeCC-CcEEEeccccc
Confidence            5679999999999999876 48899988764

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=91.47  E-value=0.19  Score=36.63  Aligned_cols=29  Identities=10%  Similarity=0.316  Sum_probs=24.9

Q ss_pred             CeEeccCCCCCeeeCC-CCCeEECcccccc
Q 043958           17 PIVFKNIKLSSILFDE-DHVAKLFDFSLAE   45 (163)
Q Consensus        17 ~~~H~dik~~nil~~~-~~~~~l~dfg~~~   45 (163)
                      -+.|.|+.+.||++++ ++.++++||..+.
T Consensus       183 v~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        183 VFAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            4799999999999974 5789999998873

>PRK11768 serine/threonine protein kinase; Provisional

Probab=91.30  E-value=0.14  Score=37.19  Aligned_cols=29  Identities=17%  Similarity=0.177  Sum_probs=24.1

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ..+++|+|+.+.||+++ + .+.++||+-+.
T Consensus       195 ~~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        195 RLLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             CccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            45789999999999995 4 57789999774

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=91.24  E-value=0.27  Score=36.11  Aligned_cols=30  Identities=13%  Similarity=0.287  Sum_probs=27.6

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..|+||+|..-=||++..++.++++||--+
T Consensus       220 ~~GlIHgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  220 NHGLIHGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             HcCceecccchheeEEecCCCEEEeechHh
Confidence            789999999999999999999999999754

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=91.03  E-value=0.3  Score=36.35  Aligned_cols=32  Identities=31%  Similarity=0.511  Sum_probs=28.4

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      .-.+-|||+.-+||+++ +|++.++||-+++.-
T Consensus       340 kf~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         340 KFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             cCCcccccccccceeee-cCceEEEEeeeeecc
Confidence            45778999999999999 999999999999743

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=90.98  E-value=0.14  Score=39.67  Aligned_cols=76  Identities=17%  Similarity=0.068  Sum_probs=44.6

Q ss_pred             cccceeecchhhHHHhhhccccccccchhh--ccchhhhhh------hcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDE--IVDPVIREE------LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      .|+||||+|.++.++.-+............  .+.+....+      .+.. ...-.+...+.++..+|+...|..||..
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~-~~~~~~d~~~~~~~~~c~~~~~~ir~l~  188 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEH-LIQLLADKKRLPLLKKCLWLEPIIRPLP  188 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHH-HHHHhhhHhHHHHhccCCccccccccch
Confidence            599999999999988766554432211111  111100000      0000 1123456778899999999999999876


Q ss_pred             HHHHH
Q 043958          150 IDVAK  154 (163)
Q Consensus       150 ~~i~~  154 (163)
                      .++.+
T Consensus       189 ~~~~k  193 (725)
T KOG1093|consen  189 MELSK  193 (725)
T ss_pred             hHHhc
Confidence            65543

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=90.79  E-value=0.42  Score=35.39  Aligned_cols=30  Identities=20%  Similarity=0.329  Sum_probs=25.2

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.||+++.++ +++.|+.++.
T Consensus       191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~~  220 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFAF  220 (370)
T ss_pred             cceeeeccCCcccEEEcCCC-CEEEcCcccc
Confidence            66889999999999998765 6788987663

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=90.21  E-value=0.22  Score=38.71  Aligned_cols=35  Identities=20%  Similarity=0.211  Sum_probs=29.5

Q ss_pred             CCCeEeccCCCCCeeeCC----CCCeEECccccccccCC
Q 043958           15 PRPIVFKNIKLSSILFDE----DHVAKLFDFSLAESIPD   49 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~----~~~~~l~dfg~~~~~~~   49 (163)
                      ..|++|+|-.|.||++.+    ++.+.+.|||+...+..
T Consensus       319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             hcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            568999999999999984    56789999999866543

>PRK12396 5-methylribose kinase; Reviewed

Probab=89.73  E-value=0.46  Score=35.66  Aligned_cols=29  Identities=17%  Similarity=0.425  Sum_probs=24.4

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ....+|+|+.|.||++++++ +||.|.-++
T Consensus       226 ~~aLlHGDlHtGSI~v~~~~-~kvIDpEFA  254 (409)
T PRK12396        226 AQALIHGDLHTGSVFVKNDS-TKVIDPEFA  254 (409)
T ss_pred             chhhccCcCCCCCEEecCCc-eEEEccccc
Confidence            66789999999999999874 788886655

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=89.14  E-value=0.24  Score=35.24  Aligned_cols=30  Identities=30%  Similarity=0.350  Sum_probs=23.4

Q ss_pred             CCCeEeccCCCCCeeeCCC--C---CeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDED--H---VAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~--~---~~~l~dfg~~   44 (163)
                      -.-++|+|+.+.|||+..+  |   .+++.||-.+
T Consensus       214 ~~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~  248 (294)
T PF02958_consen  214 FNVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLA  248 (294)
T ss_pred             ceEEEcCccCHHhEeEccccccccccceeeccccc
Confidence            3467999999999999654  3   4788888755

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=89.08  E-value=0.51  Score=31.84  Aligned_cols=34  Identities=21%  Similarity=0.307  Sum_probs=24.6

Q ss_pred             HHHHhcCCCCCeEeccCCCCCeeeCCC--C--CeEECc-ccc
Q 043958            7 LAYLHVGFPRPIVFKNIKLSSILFDED--H--VAKLFD-FSL   43 (163)
Q Consensus         7 l~~lh~~~~~~~~H~dik~~nil~~~~--~--~~~l~d-fg~   43 (163)
                      ..||-   ..+|+.+|++|.||++...  +  .+.++| ||.
T Consensus       131 ~~~l~---~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG~G~  169 (199)
T PF10707_consen  131 KRYLL---DHHIVIRDLNPHNIVVQRRDSGEFRLVLIDGLGE  169 (199)
T ss_pred             HHHHH---HcCCeecCCCcccEEEEecCCCceEEEEEeCCCC
Confidence            35666   7899999999999999433  2  466666 443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=88.86  E-value=0.025  Score=49.02  Aligned_cols=80  Identities=10%  Similarity=-0.028  Sum_probs=58.1

Q ss_pred             CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccceeecchhhHHHhhhc
Q 043958           17 PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRV   96 (163)
Q Consensus        17 ~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~   96 (163)
                      --+|+++|+-|.++..+..+++.++|+.+..+......  ....+++.|+.|+....-.++.++|+|+.|+..+....+.
T Consensus      1360 T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~--Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n 1437 (2724)
T KOG1826|consen 1360 TNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFF--GLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGN 1437 (2724)
T ss_pred             cchhhhhhhhccceecCCcccccccccccccCchHhhh--hhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhccc
Confidence            45789999999999999999999999987332222111  1335667788888766667888899999887777655544


Q ss_pred             cc
Q 043958           97 KK   98 (163)
Q Consensus        97 ~~   98 (163)
                      .+
T Consensus      1438 ~~ 1439 (2724)
T KOG1826|consen 1438 AY 1439 (2724)
T ss_pred             HH
Confidence            43

>PRK06149 hypothetical protein; Provisional

Probab=88.56  E-value=0.28  Score=41.08  Aligned_cols=31  Identities=19%  Similarity=0.198  Sum_probs=25.0

Q ss_pred             CCCeEeccCCCCCeeeCCCC--C---eEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDH--V---AKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~--~---~~l~dfg~~~   45 (163)
                      ..++||.|+.+.||+++.+.  .   .-|+|||-+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            46899999999999998652  2   3689999763

>PLN02756 S-methyl-5-thioribose kinase

Probab=87.75  E-value=0.82  Score=34.50  Aligned_cols=30  Identities=17%  Similarity=0.348  Sum_probs=24.3

Q ss_pred             CCCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           14 FPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        14 ~~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      .....+|+|+.+.||+++.++ .++.|-.++
T Consensus       228 ~~~~L~HGDl~~g~i~~~~~~-~~~id~ef~  257 (418)
T PLN02756        228 RAQALVHGDLHTGSVMVTPDS-TQVIDPEFA  257 (418)
T ss_pred             cccceeecCCCCCcEEEcCCC-ceEecchhh
Confidence            367899999999999999876 677775544

>PLN02876 acyl-CoA dehydrogenase

Probab=85.76  E-value=0.79  Score=37.80  Aligned_cols=31  Identities=19%  Similarity=0.477  Sum_probs=24.3

Q ss_pred             CCeEeccCCCCCeeeCCC--CCeEECccccccc
Q 043958           16 RPIVFKNIKLSSILFDED--HVAKLFDFSLAES   46 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~--~~~~l~dfg~~~~   46 (163)
                      ..++|+|+++.|++++.+  ...-|.||.++..
T Consensus       225 ~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~  257 (822)
T PLN02876        225 TGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL  257 (822)
T ss_pred             cceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence            469999999999999753  3356889988753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	163
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		8e-15
3uim_A	326	Structural Basis For The Impact Of Phosphorylation		9e-15
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		1e-14
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		1e-13
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-09
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-09
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		8e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		9e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		9e-06
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		2e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		3e-05
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		5e-05
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		5e-05
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		5e-05
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		5e-05
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		6e-05
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		6e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		6e-05
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		6e-05
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		6e-05
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		6e-05
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		7e-05
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		7e-05
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		7e-05
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		7e-05
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		7e-05
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		8e-05
2pl0_A	289	Lck Bound To Imatinib Length = 289		8e-05
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		9e-05
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		9e-05
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		2e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		2e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-04
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-04
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-04
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		3e-04
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		3e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		3e-04
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		3e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		3e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		3e-04
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-04
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-04
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-04
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-04
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		3e-04
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		4e-04
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		4e-04
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		4e-04
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		4e-04
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-04
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		6e-04
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		6e-04
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		7e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		7e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		8e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		8e-04
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		8e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		8e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		8e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		8e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		8e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		9e-04
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		9e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		9e-04

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 76.3 bits (186), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +   + H+  A+  G +
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-GTI 207
Query: 64  GFVATEYVTTGDYNEKCDVFSFA--------GDRHWLLNRVKKHIECNTFDEIVDPVIRE 115
           G +A EY++TG  +EK DVF +         G R + L R+    +    D  V  +++E
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD-WVKGLLKE 266
Query: 116 -------ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
                  ++ +Q + KD++V+  +++A+ C   S  +RP M +V + L
Sbjct: 267 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314

>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation Length = 326

Iteration: 1
 Score = 75.9 bits (185), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIM 63
           A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +   + H+  A+  G +
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR-GXI 199
Query: 64  GFVATEYVTTGDYNEKCDVFSFA--------GDRHWLLNRVKKHIECNTFDEIVDPVIRE 115
           G +A EY++TG  +EK DVF +         G R + L R+    +    D  V  +++E
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD-WVKGLLKE 258
Query: 116 -------ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
                  ++ +Q + KD++V+  +++A+ C   S  +RP M +V + L
Sbjct: 259 KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 91/178 (51%), Gaps = 29/178 (16%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L YLH    R I+ +++K  +IL DE+ V K+ DF +++   + G+TH+   +  G 
Sbjct: 149 ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVK-GT 204
Query: 63  MGFVATEYVTTGDYNEKCDVFSFA---------------GDRHWLLNRVKKHIECNT--- 104
           +G++  EY   G   EK DV+SF                     ++N  +  +E +    
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 105 FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRF 162
            ++IVDP + +++      + + ++ F + AVKC++ S+EDRP+M DV  +L  A R 
Sbjct: 265 LEQIVDPNLADKI------RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 29/178 (16%)
Query: 4   ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPD-GETHIKDAIPIGI 62
           A  L YLH    R I+ +++K  +IL DE+ V K+ DF +++   +  +TH+   +  G 
Sbjct: 149 ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVK-GT 204
Query: 63  MGFVATEYVTTGDYNEKCDVFSFA---------------GDRHWLLNRVKKHIECNT--- 104
           +G++  EY   G   EK DV+SF                     ++N  +  +E +    
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 105 FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRF 162
            ++IVDP + +++      + + ++ F + AVKC++ S+EDRP+M DV  +L  A R 
Sbjct: 265 LEQIVDPNLADKI------RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++ +  +AYLH   P+ ++ +++K  ++L      V K+ DF  A  I   +TH+ +   
Sbjct: 110 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK- 165
Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI 119
            G   ++A E     +Y+EKCDVFS+      ++ R K       FDEI  P  R    +
Sbjct: 166 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK------PFDEIGGPAFRIMWAV 218
Query: 120 QSSEKDKQVQAFVE----LAVKCVSESAEDRPTMIDVAKQLRQAYRF 162
            +  +   ++   +    L  +C S+    RP+M ++ K +    R+
Sbjct: 219 HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 265

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 16/167 (9%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++ +  +AYLH   P+ ++ +++K  ++L      V K+ DF  A  I   +TH+ +   
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNNK- 164
Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI 119
            G   ++A E     +Y+EKCDVFS+      ++ R K       FDEI  P  R    +
Sbjct: 165 -GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK------PFDEIGGPAFRIMWAV 217
Query: 120 QSSEKDKQVQAFVE----LAVKCVSESAEDRPTMIDVAKQLRQAYRF 162
            +  +   ++   +    L  +C S+    RP+M ++ K +    R+
Sbjct: 218 HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY 264

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--------------ESI 47
           +I  AL+Y+H    + I+ +N+K  +I  DE    K+ DF LA              +++
Sbjct: 124 QILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 48  PDGETHIKDAIPIGIMGFVATEYV-TTGDYNEKCDVFSFA 86
           P    ++  A  IG   +VATE +  TG YNEK D +S  
Sbjct: 181 PGSSDNLTSA--IGTAXYVATEVLDGTGHYNEKIDXYSLG 218

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + YLH   P PIV +N+K  ++L D+ +  K+ DF L+       T +      G
Sbjct: 145 DVAKGMNYLHNRNP-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAG 201
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
              ++A E +     NEK DV+SF 
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFG 226

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+  AL YLH    + I+++++K  +IL D++   K+ DF  A+ +PD    +      G
Sbjct: 114 EVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXL-----CG 165
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
              ++A E V+T  YN+  D +SF 
Sbjct: 166 TPDYIAPEVVSTKPYNKSIDWWSFG 190

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + +N++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 113 QIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 170 IK-WTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 218
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 219 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 252

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--------------ESI 47
           +I  AL+Y+H    + I+ +++K  +I  DE    K+ DF LA              +++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 48  PDGETHIKDAIPIGIMGFVATEYV-TTGDYNEKCDVFSFA 86
           P    ++  A  IG   +VATE +  TG YNEK D++S  
Sbjct: 181 PGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLG 218

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 20/100 (20%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--------------ESI 47
           +I  AL+Y+H    + I+ +++K  +I  DE    K+ DF LA              +++
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 48  PDGETHIKDAIPIGIMGFVATEYV-TTGDYNEKCDVFSFA 86
           P    ++  A  IG   +VATE +  TG YNEK D++S  
Sbjct: 181 PGSSDNLTSA--IGTAMYVATEVLDGTGHYNEKIDMYSLG 218

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 171
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLG 197

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLG 192

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLG 192

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLG 192

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFC 169
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLG 195

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLG 192

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 174 IK-WTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 222
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 223 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 7/86 (8%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    R +V+++IKL +++ D+D   K+ DF L  E I DG T        
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFC 166
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLG 192

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 118 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 175 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 223
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 224 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 257

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 119 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 176 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 224
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 225 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 258

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 174 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 222
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 223 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 126 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 183 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 231
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 232 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 265

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 125 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 182 IK-WTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 230
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 231 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 264

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 174 IK-WTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 222
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 223 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 123 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 180 IK-WTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 228
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 229 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 174 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 222
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 223 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 256

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 127 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 184 IK-WTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 232
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 233 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 266

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 123 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 180 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 228
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 229 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 262

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 122 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 179 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 227
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 228 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 261

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 112 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL  +  H        I  P +     IQ+
Sbjct: 169 I-KWTAPEAINYGTFTIKSDVWSFGI----LLTEIVTH------GRIPYPGMTNPEVIQN 217
Query: 122 SEK-------DKQVQAFVELAVKCVSESAEDRPT 148
            E+       D   +   +L   C  E  EDRPT
Sbjct: 218 LERGYRMVRPDNCPEELYQLMRLCWKERPEDRPT 251

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA E      +H  + +  
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 61  GIMGFVATEYVTTGD---YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL 117
            I+ ++A E +   D   Y+ + DV++F    + L+     +   N  D+I++ V R  L
Sbjct: 185 SIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 118 CIQSSE-KDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
               S+ +    +    L  +C+ +  ++RP+   +  ++ +  R
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA-ESIPDGETHIKDAIPI 60
           + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA E      +H  + +  
Sbjct: 128 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
Query: 61  GIMGFVATEYVTTGD---YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL 117
            I+ ++A E +   D   Y+ + DV++F    + L+     +   N  D+I++ V R  L
Sbjct: 185 SIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 118 CIQSSE-KDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
               S+ +    +    L  +C+ +  ++RP+   +  ++ +  R
Sbjct: 244 SPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + YLH   P PIV +++K  ++L D+ +  K+ DF L+         +      G
Sbjct: 145 DVAKGMNYLHNRNP-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAG 201
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
              ++A E +     NEK DV+SF 
Sbjct: 202 TPEWMAPEVLRDEPSNEKSDVYSFG 226

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
             GF+A E +   +Y+   D F+  
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
             GF+A E +   +Y+   D F+  
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
             GF+A E +   +Y+   D F+  
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I + L +LH    R I+++++K  ++L D+D   ++ D  LA  +  G+T  K     G
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGY--AG 351
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFA 86
             GF+A E +   +Y+   D F+  
Sbjct: 352 TPGFMAPELLLGEEYDFSVDYFALG 376

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 24/178 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK----DA 57
           +I   +AYLH    +  + +N+   ++L D D + K+ DF LA+++P+G  + +      
Sbjct: 125 QICEGMAYLHA---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNT-FDEIVD------ 110
            P+    + A E +    +    DV+SF    + LL          T F E++       
Sbjct: 182 SPV---FWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 238
Query: 111 PVIREELCIQSSEK----DKQVQAFVELAVKCVSESAEDRPT---MIDVAKQLRQAYR 161
            V+R    ++  E+    DK       L   C    A  RPT   +I + K + + YR
Sbjct: 239 TVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL     V K+ DF LA  I D E   ++     
Sbjct: 292 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL      +E  T+  I  P +     I++
Sbjct: 349 IK-WTAPEAINFGSFTIKSDVWSFGI----LL------MEIVTYGRIPYPGMSNPEVIRA 397
Query: 122 SEKDKQV-------QAFVELAVKCVSESAEDRPT 148
            E+  ++       +    + ++C     E+RPT
Sbjct: 398 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 431

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA--ESIPDGETHIKDAIP 59
           + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA  +S   G +H  + + 
Sbjct: 116 QTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSG-SHQFEQLS 171
Query: 60  IGIMGFVATEYVTTGD---YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE 116
             I+ ++A E +   D   Y+ + DV++F    + L+     +   N  D+I++ V R  
Sbjct: 172 GSIL-WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS 230
Query: 117 LCIQSSE-KDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
           L    S+ +    +    L  +C+ +  ++RP+   +  ++ +  R
Sbjct: 231 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL     V K+ DF LA  I D E   ++     
Sbjct: 119 QIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E +  G +  K DV+SF      LL      +E  T+  I  P +     I++
Sbjct: 176 I-KWTAPEAINFGSFTIKSDVWSFGI----LL------MEIVTYGRIPYPGMSNPEVIRA 224
Query: 122 SEKDKQV-------QAFVELAVKCVSESAEDRPT 148
            E+  ++       +    + ++C     E+RPT
Sbjct: 225 LERGYRMPRPENCPEELYNIMMRCWKNRPEERPT 258

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 259 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 313
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLG 339

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFC 310
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLG 336

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 112 EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 166
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              ++A E +    Y+ K D++S       L      H E +   +++  + +       
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-KVLFLIPKNNPPTLE 225
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ---LRQAYR 161
               K ++ FVE    C+++    RPT  ++ K    LR A +
Sbjct: 226 GNYSKPLKEFVE---ACLNKEPSFRPTAKELLKHKFILRNAKK 265

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 24/178 (13%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK----DA 57
           +I   +AYLH    +  + +N+   ++L D D + K+ DF LA+++P+G  + +      
Sbjct: 125 QICEGMAYLHS---QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD 181
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNT-FDEIVD------ 110
            P+    + A E +    +    DV+SF    + LL          T F E++       
Sbjct: 182 SPV---FWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQM 238
Query: 111 PVIREELCIQSSEK----DKQVQAFVELAVKCVSESAEDRPT---MIDVAKQLRQAYR 161
            V+R    ++  E+    DK       L   C    A  RPT   +I + K + + YR
Sbjct: 239 TVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYR 296

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 132 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 188
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 189 AKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 247
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           L       D       E+ +KC    AE RP+  ++  ++   +
Sbjct: 248 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 287

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 127 EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVG 181
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              ++A E +    Y+ K D++S       L      H E +   +++  + +       
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-KVLFLIPKNNPPTLE 240
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ---LRQAYR 161
               K ++ FVE    C+++    RPT  ++ K    LR A +
Sbjct: 241 GNYSKPLKEFVE---ACLNKEPSFRPTAKELLKHKFILRNAKK 280

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 132 EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 186
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              ++A E +    Y+ K D++S       L      H E +   +++  + +       
Sbjct: 187 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-KVLFLIPKNNPPTLE 245
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ---LRQAYR 161
               K ++ FVE    C+++    RPT  ++ K    LR A +
Sbjct: 246 GNYSKPLKEFVE---ACLNKEPSFRPTAKELLKHKFILRNAKK 285

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 112 EILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNXFVG 166
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              ++A E +    Y+ K D++S       L      H E +   +++  + +       
Sbjct: 167 TPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM-KVLFLIPKNNPPTLE 225
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ---LRQAYR 161
               K ++ FVE    C+++    RPT  ++ K    LR A +
Sbjct: 226 GNYSKPLKEFVE---ACLNKEPSFRPTAKELLKHKFILRNAKK 265

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 137 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 193
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 194 AKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 252
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           L       D       E+ +KC    AE RP+  ++  ++   +
Sbjct: 253 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 292

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 135 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 191
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 192 AKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 250
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
           L       D       E+ +KC    AE RP+  ++  ++
Sbjct: 251 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 286

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 140 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 196
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 197 AKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 255
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           L       D       E+ +KC    AE RP+  ++  ++   +
Sbjct: 256 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 295

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 140 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 196
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 197 AKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 255
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
           L       D       E+ +KC    AE RP+  ++  ++
Sbjct: 256 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 291

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 139 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTG 195
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 196 AKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 254
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           L       D       E+ +KC    AE RP+  ++  ++   +
Sbjct: 255 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 294

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 159 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 215
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 216 AKLPV-KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 274
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           L       D       E+ +KC    AE RP+  ++  ++   +
Sbjct: 275 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 314

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 138 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 194
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 195 AKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 253
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           L       D       E+ +KC    AE RP+  ++  ++   +
Sbjct: 254 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 293

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 12/160 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 139 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 195
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 196 AKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 254
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
           L       D       E+ +KC    AE RP+  ++  ++
Sbjct: 255 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRI 290

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDA 57
           +++A  + YL     +  V +++   + + DE    K+ DF LA  + D E    H K  
Sbjct: 158 LQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTG 214
Query: 58  IPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREE 116
             + +  ++A E + T  +  K DV+SF      L+ R    + + NTFD  V  +    
Sbjct: 215 AKLPVK-WMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR 273
Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
           L       D       E+ +KC    AE RP+  ++  ++   +
Sbjct: 274 LLQPEYCPD----PLYEVMLKCWHPKAEMRPSFSELVSRISAIF 313

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 172
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLG 198

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 171
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLG 197

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSL-AESIPDGETHIKDAIPI 60
           EI +AL YLH    + +V++++KL +++ D+D   K+ DF L  E I DG T        
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFC 170
Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
           G   ++A E +   DY    D +   
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLG 196

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 179 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 238 PECPESLH---DLMCQCWRKDPEERPT 261

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 112 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP 168
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 169 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 227
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 228 PECPESLH---DLMCQCWRKEPEERPT 251

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 119 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 176 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 234
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 235 PECPESLH---DLMCQCWRKEPEERPT 258

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 179 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 238 PECPESLH---DLMCQCWRKDPEERPT 261

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 179 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 238 PECPESLH---DLMCQCWRKDPEERPT 261

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 8/158 (5%)
Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +A   A  H+     I+ ++IK S+IL D     KL DF ++  + D     +DA   G 
Sbjct: 132 LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA---GC 188
Query: 63  MGFVATEYV----TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNT-FDEIVDPVIREEL 117
             ++A E +    +   Y+ + DV+S     + L      + + N+ FD++   V  +  
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP 248
Query: 118 CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ 155
            + +SE+ +   +F+     C+++    RP   ++ K 
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 119 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 175
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 176 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 234
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 235 PECPESLH---DLMCQCWRKEPEERPT 258

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 179 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 238 PECPESLH---DLMCQCWRKDPEERPT 261

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 179 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 238 PECPESLH---DLMCQCWRKDPEERPT 261

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 179 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 238 PECPESLH---DLMCQCWRKDPEERPT 261

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 122 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 178
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 179 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 238 PECPESLH---DLMCQCWRKDPEERPT 261

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 115 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 171
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 172 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 230
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 231 PECPESLH---DLMCQCWRKEPEERPT 254

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 7/147 (4%)
Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 113 QIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP 169
Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
           I  + A E    G +  K DV+SF      L  + +         E++D V R       
Sbjct: 170 IK-WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 228
Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPT 148
            E  + +    +L  +C  +  E+RPT
Sbjct: 229 PECPESLH---DLMCQCWRKDPEERPT 252

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	163
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	3e-32
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	5e-32
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-26
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-18
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-13
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-12
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	9e-12
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-11
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	6e-11
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-11
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-11
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-10
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	4e-09
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	6e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	9e-08
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-07
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-07
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-07
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	4e-07
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-06
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	6e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	1e-05
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-05
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-05
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-05
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	4e-05
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	4e-05
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	5e-05
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-05
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	8e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-04
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-04
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-04
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-04
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-04
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-04
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	1e-04
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-04
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-04
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-04
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-04
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-04
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-04
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-04
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-04
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-04
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-04
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-04
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	5e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	6e-04
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	7e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	7e-04
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	7e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	8e-04
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	8e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	8e-04
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	9e-04

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score =  115 bits (291), Expect = 3e-32
 Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 35/183 (19%)

Query: 1   MEI----ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDG-ETHIK 55
           +EI    A  L YLH      I+ +++K  +IL DE+ V K+ DF +++   +  +TH+ 
Sbjct: 142 LEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLS 198

Query: 56  DAIPIGIMGFVATEYVTTGDYNEKCDVFSF-------------------AGDRHWLLNRV 96
             +  G +G++  EY   G   EK DV+SF                       + L    
Sbjct: 199 TVV-KGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVN-LAEWA 256

Query: 97  KKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
            +       ++IVDP + +++  +S  K      F + AVKC++ S+EDRP+M DV  +L
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRK------FGDTAVKCLALSSEDRPSMGDVLWKL 310

Query: 157 RQA 159
             A
Sbjct: 311 EYA 313

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score =  115 bits (290), Expect = 5e-32
 Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 27/174 (15%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
            A  LAYLH      I+ +++K ++IL DE+  A + DF LA+ +   +TH+  A+  G 
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV-RGT 198

Query: 63  MGFVATEYVTTGDYNEKCDVFSF--------------------AGDRHWLLNRVKKHIEC 102
           +G +A EY++TG  +EK DVF +                      D   LL+ VK  ++ 
Sbjct: 199 IGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 258

Query: 103 NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
              + +VD  ++         KD++V+  +++A+ C   S  +RP M +V + L
Sbjct: 259 KKLEALVDVDLQGNY------KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score =  100 bits (252), Expect = 2e-26
 Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 30/172 (17%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE-THIKDAIPIG 61
            AN + +LH       + ++IK ++IL DE   AK+ DF LA +      T +   I +G
Sbjct: 142 AANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRI-VG 197

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF------------AGDR----HWLLNRVKK-HIECNT 104
              ++A E +  G+   K D++SF            A D       LL+  ++   E  T
Sbjct: 198 TTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKT 256

Query: 105 FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
            ++ +D  + +      S     V+A   +A +C+ E    RP +  V + L
Sbjct: 257 IEDYIDKKMND----ADS---TSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 79.8 bits (197), Expect = 1e-18
 Identities = 32/186 (17%), Positives = 71/186 (38%), Gaps = 30/186 (16%)

Query: 3   IANALAYLHVGFPR-------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +A  LAYLH   P         I  ++IK  ++L   +  A + DF LA     G++   
Sbjct: 130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGD 189

Query: 56  DAIPIGIMGFVATEYV-----TTGDYNEKCDVFSFA---------------GDRHWLLNR 95
               +G   ++A E +        D   + D+++                     ++L  
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPF 249

Query: 96  VKKHIECNTFDEIVDPVIREEL--CIQSS-EKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
            ++  +  + +++ + V+ ++    ++   +K   +    E   +C    AE R +   V
Sbjct: 250 EEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309

Query: 153 AKQLRQ 158
            +++ Q
Sbjct: 310 GERITQ 315

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 64.0 bits (156), Expect = 6e-13
 Identities = 29/193 (15%), Positives = 62/193 (32%), Gaps = 40/193 (20%)

Query: 1   MEIANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
               + L +LH           I  +++K  +IL  ++    + D  LA      +T+  
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEV 199

Query: 56  DAIPIGIMG---------FVATEYVTTGDYNEKCDVFSFAGDRH---W-LLNRVKKHIEC 102
           D  P   +G            +            D++SF        W +  R       
Sbjct: 200 DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFG----LILWEVARRCVSGGIV 255

Query: 103 N--------------TFDEIVDPVIREEL--CI-QSSEKDKQVQAFVELAVKCVSESAED 145
                          +++++ + V  ++L          D+ ++   +L  +C + +   
Sbjct: 256 EEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPAS 315

Query: 146 RPTMIDVAKQLRQ 158
           R T + V K L +
Sbjct: 316 RLTALRVKKTLAK 328

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 40/193 (20%)

Query: 1   MEIANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +  A+ LA+LH+          I  +++K  +IL  ++    + D  LA    D  T   
Sbjct: 146 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA-VRHDSATDTI 204

Query: 56  DAIPIGIMG---------FVATEYVTTGDYNEKCDVFSFA---GDRHW-LLNRVKKHIEC 102
           D  P   +G            +  +   +  ++ D+++         W +  R       
Sbjct: 205 DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF----WEIARRCSIGGIH 260

Query: 103 N--------------TFDEIVDPVIREEL--CIQSS-EKDKQVQAFVELAVKCVSESAED 145
                          + +E+   V  ++L   I +  +  + ++   ++  +C   +   
Sbjct: 261 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 320

Query: 146 RPTMIDVAKQLRQ 158
           R T + + K L Q
Sbjct: 321 RLTALRIKKTLSQ 333

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 60.6 bits (147), Expect = 9e-12
 Identities = 30/200 (15%), Positives = 53/200 (26%), Gaps = 48/200 (24%)

Query: 3   IANALAYLHVGFPR------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD 56
           +   LAYLH   PR       I  +++   ++L   D    + DF L+  +         
Sbjct: 120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPG 179

Query: 57  AIPIGIMGFVAT------EY-------VTTGDYNEKCDVFSFA-----------GDRHW- 91
                 +  V T      E               ++ D+++                   
Sbjct: 180 EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGE 239

Query: 92  --------LLNRVKKHIECNTFDEIVD-----PVIREELCIQSSEKDKQVQAFVELAVKC 138
                       V  H        +V      P   E       E    V++  E    C
Sbjct: 240 SVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW----KENSLAVRSLKETIEDC 295

Query: 139 VSESAEDRPTMIDVAKQLRQ 158
             + AE R T     +++ +
Sbjct: 296 WDQDAEARLTAQXAEERMAE 315

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 58.1 bits (141), Expect = 6e-11
 Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 40/191 (20%)

Query: 3   IANALAYLHVGFPR-----PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDA 57
           IA+ LA+LH+          I  +++K  +IL  ++    + D  LA  +    T+  D 
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDV 172

Query: 58  IPIGIMG---------FVATEYVTTGDYNEKCDVFSFAGDRH---W-LLNRVKKHIECN- 103
                +G            T  V   D  ++ D+++F        W +  R+  +     
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG----LVLWEVARRMVSNGIVED 228

Query: 104 -------------TFDEIVDPVIREEL--CI-QSSEKDKQVQAFVELAVKCVSESAEDRP 147
                        +F+++   V  ++    I      D  + +  +L  +C  ++   R 
Sbjct: 229 YKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARL 288

Query: 148 TMIDVAKQLRQ 158
           T + + K L +
Sbjct: 289 TALRIKKTLTK 299

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 58.1 bits (141), Expect = 6e-11
 Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 30/170 (17%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIP 59
           ++ +  +AYLH   P+ ++ +++K  ++L      V K+ DF  A  I    T+ K    
Sbjct: 109 LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK---- 164

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHI---ECNT----FDEIVDPV 112
            G   ++A E     +Y+EKCDVFS+              I   E  T    FDEI  P 
Sbjct: 165 -GSAAWMAPEVFEGSNYSEKCDVFSWG-------------IILWEVITRRKPFDEIGGPA 210

Query: 113 IREELCIQSSEK----DKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
            R    + +  +        +    L  +C S+    RP+M ++ K +  
Sbjct: 211 FRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTH 260

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 58.1 bits (141), Expect = 7e-11
 Identities = 35/166 (21%), Positives = 73/166 (43%), Gaps = 9/166 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            + A  + YLH    + I+ +++K ++I   ED+  K+ DF LA          +     
Sbjct: 127 RQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183

Query: 61  GIMGFVATE---YVTTGDYNEKCDVFSFAGDRHW-LLNRVKKHIECNTFDEIVDPVIREE 116
           G + ++A E      +  Y+ + DV++F G   + L+     +   N  D+I++ V R  
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAF-GIVLYELMTGQLPYSNINNRDQIIEMVGRGS 242

Query: 117 LCIQSSEKDKQV-QAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
           L    S+      +    L  +C+ +  ++RP+   +  ++ +  R
Sbjct: 243 LSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 55.8 bits (135), Expect = 5e-10
 Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 31/178 (17%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH------IKD 56
           IA+ +AYLH      I+ +++   + L  E+    + DF LA  + D +T       +K 
Sbjct: 117 IASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173

Query: 57  AIPIGIMGFVAT------EYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVD 110
                    V        E +    Y+EK DVFSF      ++ RV    +         
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFG 233

Query: 111 PVIREEL-------CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
             +R  L       C           +F  + V+C     E RP+ + +   L     
Sbjct: 234 LNVRGFLDRYCPPNCP---------PSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 53.1 bits (128), Expect = 4e-09
 Identities = 33/179 (18%), Positives = 59/179 (32%), Gaps = 48/179 (26%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + YLH     PIV +N+K  ++L D+ +  K+ DF L+         +K +  +
Sbjct: 144 YDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS--------RLKASTFL 194

Query: 61  GIMGFVAT------EYVTTGDYNEKCDVFSFA--------GDRHWLLNRVKKHIECNTFD 106
                  T      E +     NEK DV+SF           + W       ++      
Sbjct: 195 SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW------GNL---NPA 245

Query: 107 EIVDPVIREEL-------CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
           ++V  V  +                         +   C +     RP+   +   LR 
Sbjct: 246 QVVAAVGFKCKRLEIPRNLN---------PQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 49/185 (26%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA---ESIPDGETHIKDA 57
            EI   + YLH    + I+ K++K  ++ +D   V  + DF L      +  G    K  
Sbjct: 137 QEIVKGMGYLHA---KGILHKDLKSKNVFYDNGKV-VITDFGLFSISGVLQAGRREDKLR 192

Query: 58  IPIG---------IMGFVATEYVTTGDYNEKCDVFSFA--------GDRHWLLNRVKKHI 100
           I  G         I             +++  DVF+           +  +         
Sbjct: 193 IQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPF--------- 243

Query: 101 ECNTFDEIVD-------PVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA 153
           +    + I+        P + +             +   ++ + C +   E+RPT   + 
Sbjct: 244 KTQPAEAIIWQMGTGMKPNLSQIGMG---------KEISDILLFCWAFEQEERPTFTKLM 294

Query: 154 KQLRQ 158
             L +
Sbjct: 295 DMLEK 299

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 49.7 bits (119), Expect = 6e-08
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 31/165 (18%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +I   L +LH   P PI+ +++K  +I         K+ D  LA       +  K  I  
Sbjct: 137 QILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLK--RASFAKAVI-- 191

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF--------AGDRHWLLNRVKKHIECNTFDEIVDPV 112
           G   F+A E      Y+E  DV++F          +  +         EC    +I   V
Sbjct: 192 GTPEFMAPEMYEEK-YDESVDVYAFGMCMLEMATSEYPYS--------ECQNAAQIYRRV 242

Query: 113 IREEL-CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
                          +V+  +E    C+ ++ ++R +     K L
Sbjct: 243 TSGVKPASFDKVAIPEVKEIIE---GCIRQNKDERYS----IKDL 280

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 49.3 bits (118), Expect = 9e-08
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I + + YLH      IV ++IK  +IL    +     K+ DF L+         ++D + 
Sbjct: 155 ILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL- 209

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G   ++A E V    YNEKCDV+S
Sbjct: 210 -GTAYYIAPE-VLKKKYNEKCDVWS 232

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 48.5 bits (116), Expect = 2e-07
 Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + YLH      IV +++K  ++L    ++D + K+ DF L+    + +  +K+ + 
Sbjct: 145 VLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK-MKERL- 199

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G   ++A E V    Y+EKCDV+S
Sbjct: 200 -GTAYYIAPE-VLRKKYDEKCDVWS 222

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 47.6 bits (114), Expect = 2e-07
 Identities = 21/100 (21%), Positives = 39/100 (39%), Gaps = 24/100 (24%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDE--------DHVAKLFDFSLAESIPDGET 52
           ++IA  + YLH     PI+ +++K S+IL  +        + + K+ DF LA        
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK 171

Query: 53  HIKDAIPIGIMGFVAT------EYVTTGDYNEKCDVFSFA 86
                     M           E +    +++  DV+S+ 
Sbjct: 172 ----------MSAAGAYAWMAPEVIRASMFSKGSDVWSYG 201

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + Y+H      IV +++K  ++L     +D   ++ DF L+      +  +KD I 
Sbjct: 135 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK-MKDKI- 189

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G   ++A E V  G Y+EKCDV+S
Sbjct: 190 -GTAYYIAPE-VLHGTYDEKCDVWS 212

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + Y+H      IV +++K  +IL    ++D   K+ DF L+         +KD I 
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRI- 184

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G   ++A E V  G Y+EKCDV+S
Sbjct: 185 -GTAYYIAPE-VLRGTYDEKCDVWS 207

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 17/92 (18%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++A  +A+LH      I    +   S++ DED  A++    +  S              
Sbjct: 118 LDMARGMAFLH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP---------- 166

Query: 61  GIMGFVA------TEYVTTGDYNEKCDVFSFA 86
           G M   A       +           D++SFA
Sbjct: 167 GRMYAPAWVAPEALQKKPEDTNRRSADMWSFA 198

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 15/95 (15%), Positives = 26/95 (27%), Gaps = 20/95 (21%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   LA LH      +V   ++   I+ D+     L  F     + DG       +   
Sbjct: 214 QVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHL--VRDGARV----VSSV 264

Query: 62  IMGFVATEYVTT-----------GDYNEKCDVFSF 85
             GF   E                      D ++ 
Sbjct: 265 SRGFEPPELEARRATISYHRDRRTLMTFSFDAWAL 299

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 44.2 bits (105), Expect = 4e-06
 Identities = 36/180 (20%), Positives = 62/180 (34%), Gaps = 44/180 (24%)

Query: 1   MEIANALAYLHVGFPRPIV---FK--NIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           ++IA  + Y+      PIV    +  NI L S+  +    AK+ DF L++      + + 
Sbjct: 129 LDIALGIEYMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGL- 186

Query: 56  DAIPIGIMGFVATEYVTTGD--YNEKCDVFSFA--------GDRHWLLNRVKKHIECNTF 105
               +G   ++A E +   +  Y EK D +SFA        G+  +              
Sbjct: 187 ----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF------DEYSYGKI 236

Query: 106 DEIVD-------PVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
             I         P I E+                 +   C S   + RP    + K+L +
Sbjct: 237 KFINMIREEGLRPTIPEDC----------PPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 43.9 bits (104), Expect = 6e-06
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 15/94 (15%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA A+ +LH    + ++ +++K S+I F  D V K+ DF L  ++ D +   +  +   
Sbjct: 126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-DQDEEEQTVLTPM 181

Query: 62  IMGFVATEYVTT-----------GDYNEKCDVFS 84
                 T  V T             Y+ K D+FS
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFS 215

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +   ALA+LH    + +V  ++K ++I        KL DF L   +             G
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ---EG 218

Query: 62  IMGFVATEYVTTGDYNEKCDVFS 84
              ++A E +  G Y    DVFS
Sbjct: 219 DPRYMAPE-LLQGSYGTAADVFS 240

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 8/85 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + +A++++H      +V +++K  ++LF   +++   K+ DF  A   P     +K   P
Sbjct: 115 LVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT--P 169

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
              + + A E +    Y+E CD++S
Sbjct: 170 CFTLHYAAPELLNQNGYDESCDLWS 194

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + NALAY H    + +V K++K  +ILF         K+ DF LAE     E    +A  
Sbjct: 133 MMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-STNAA- 187

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G   ++A E V   D   KCD++S
Sbjct: 188 -GTALYMAPE-VFKRDVTFKCDIWS 210

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 16/96 (16%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I  AL+Y+H    + I+ +++K  +I  DE    K+ DF LA+++      +K      
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180

Query: 62  IMG------FVAT-EYV------TTGDYNEKCDVFS 84
                     + T  YV       TG YNEK D++S
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYS 216

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           +I  A+ +LH      I  +++K  ++L+   ++D V KL DF  A+             
Sbjct: 136 DIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQT---- 188

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFS 84
           P     +VA E +    Y++ CD++S
Sbjct: 189 PCYTPYYVAPEVLGPEKYDKSCDMWS 214

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 42.3 bits (99), Expect = 2e-05
 Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 19/94 (20%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   LA LH      +V   ++   I+ D+     L  F     + DG +    A+   
Sbjct: 219 QVIRLLASLHH---YGLVHTYLRPVDIVLDQRGGVFLTGFEHL--VRDGAS----AVSPI 269

Query: 62  IMGFVATEYVT----------TGDYNEKCDVFSF 85
             GF   E                     D ++ 
Sbjct: 270 GRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 9/85 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  A+ YLH      I  +++K  ++L+     + + KL DF  A+      + +    P
Sbjct: 170 IGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS-LTT--P 223

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
                +VA E +    Y++ CD++S
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDMWS 248

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 10/86 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           EI   L ++H    R +V++++K ++IL DE  HV ++ D  LA      + H      +
Sbjct: 300 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHV-RISDLGLACDFSKKKPHAS----V 351

Query: 61  GIMGFVATEYVTTG-DYNEKCDVFSF 85
           G  G++A E +  G  Y+   D FS 
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSL 377

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 17/106 (16%), Positives = 32/106 (30%), Gaps = 20/106 (18%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF-----------DEDHVAKLFDFSLA---ESI 47
            +   +  +H      I+  +IK  + +            D      L D   +   +  
Sbjct: 180 RMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLF 236

Query: 48  PDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLL 93
           P G             GF   E ++   +N + D F  A   + +L
Sbjct: 237 PKGTIFTAK---CETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML 279

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 41.4 bits (97), Expect = 4e-05
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++IA A+ +LH    + ++ +++K S+I F  D V K+ DF L  ++ D +   +  +  
Sbjct: 171 IQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-DQDEEEQTVLTP 226

Query: 61  GIMGFVATEYVTT-----------GDYNEKCDVFS 84
                  T  V T            +Y+ K D+FS
Sbjct: 227 MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFS 261

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 41.0 bits (97), Expect = 5e-05
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + +A+AY H      +  +++K  + LF     D   KL DF LA     G+  ++  + 
Sbjct: 115 VLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-MRTKV- 169

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G   +V+ + V  G Y  +CD +S
Sbjct: 170 -GTPYYVSPQ-VLEGLYGPECDEWS 192

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + + + Y+H      IV +++K  +IL    ++D   K+ DF L+         +KD I 
Sbjct: 130 VFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-MKDRI- 184

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G   ++A E V  G Y+EKCDV+S
Sbjct: 185 -GTAYYIAPE-VLRGTYDEKCDVWS 207

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 3   IANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +  AL   H        ++ +++K +++  D     KL DF LA  +    +  K    +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF--V 177

Query: 61  GIMGFVATEYVTTGDYNEKCDVFS 84
           G   +++ E +    YNEK D++S
Sbjct: 178 GTPYYMSPEQMNRMSYNEKSDIWS 201

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 40.6 bits (95), Expect = 8e-05
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           IL  E+ V K+ DF LA  I D E         PI      A E    G +  K DV+SF
Sbjct: 394 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---APEAALYGRFTIKSDVWSF 450

Query: 86  AGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQV-------QAFVELAVKC 138
            G             E  T   +  P +     +   E+  ++       ++  +L  +C
Sbjct: 451 -GILLT---------ELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 500

Query: 139 VSESAEDRPTMIDVAKQL 156
             +  E+RPT   +   L
Sbjct: 501 WRKEPEERPTFEYLQAFL 518

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 11/86 (12%), Positives = 27/86 (31%), Gaps = 10/86 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++    A L     + +V  +    ++    D    L D S       G      ++P+ 
Sbjct: 202 QLIRLAANLQS---KGLVHGHFTPDNLFIMPDGRLMLGDVSAL--WKVGTRGPASSVPV- 255

Query: 62  IMGFVATEYVT--TGDYNEKCDVFSF 85
              +   E++   T  +    + +  
Sbjct: 256 --TYAPREFLNASTATFTHALNAWQL 279

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 16/83 (19%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +I   + Y+H    + ++ +++K S+I   +    K+ DF L  S+ +           G
Sbjct: 130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR---TRSKG 183

Query: 62  IMGFVATEYVTTGDYNEKCDVFS 84
            + +++ E +++ DY ++ D+++
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYA 206

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 12/91 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDE-----DHVAKLFDFSLAESIPDGETHIKD- 56
             + LA+LH      IV +++K  +IL           A + DF L + +  G       
Sbjct: 127 TTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183

Query: 57  AIPIGIMGFVATEYV---TTGDYNEKCDVFS 84
           +   G  G++A E +      +     D+FS
Sbjct: 184 SGVPGTEGWIAPEMLSEDCKENPTYTVDIFS 214

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 40.4 bits (95), Expect = 1e-04
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  A+  +H      IV  ++K ++ L  +  + KL DF +A  +    T +     +G
Sbjct: 135 NMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVG 190

Query: 62  ---------IMGFVATEYVTTGD--YNEKCDVFS 84
                    I    ++          + K DV+S
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 224

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 18/94 (19%), Positives = 34/94 (36%), Gaps = 15/94 (15%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  A+  +H      IV  ++K ++ L  +  + KL DF +A  +    T +     +G
Sbjct: 116 NMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVG 171

Query: 62  -----------IMGFVATEYVTTGDYNEKCDVFS 84
                       M        +    + K DV+S
Sbjct: 172 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 205

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 5/53 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETH 53
           E+  AL YL     + I+ +++K  +IL DE  HV  + DF++A  +P     
Sbjct: 123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHV-HITDFNIAAMLPRETQI 171

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH 53
            + N+ +Y+H    + I  +++K S+IL D++   KL DF  +E + D +  
Sbjct: 159 SVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK 208

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 5/83 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
                L YLH       + ++IK  +IL + +  AKL DF +A  + D  T  K    IG
Sbjct: 133 STLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD--TMAKRNTVIG 187

Query: 62  IMGFVATEYVTTGDYNEKCDVFS 84
              ++A E +    YN   D++S
Sbjct: 188 TPFWMAPEVIQEIGYNCVADIWS 210

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 12/88 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +   +  LH      IV +++K  +IL D+D   KL DF  +  +  GE  +++    G 
Sbjct: 133 LLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK-LREV--CGT 186

Query: 63  MGFVATE------YVTTGDYNEKCDVFS 84
             ++A E            Y ++ D++S
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWS 214

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  A+ + H      +V +N+K  ++L     +    KL DF LA  +   +        
Sbjct: 119 ILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA- 174

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G  G+++ E +    Y +  D+++
Sbjct: 175 -GTPGYLSPEVLRKDPYGKPVDLWA 198

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 22/113 (19%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  AL Y H      I+ +++K   +L    +     KL  F +A  + +        + 
Sbjct: 139 ILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV- 194

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS--------------FAGDRHWLLNRVKK 98
            G   F+A E V    Y +  DV+               F G +  L   + K
Sbjct: 195 -GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIK 246

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 10/85 (11%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           + +A+ YLH      IV +++K  ++L+   +E+    + DF L++   +G         
Sbjct: 115 VLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA---- 167

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G  G+VA E +    Y++  D +S
Sbjct: 168 CGTPGYVAPEVLAQKPYSKAVDCWS 192

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 9/88 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAI-- 58
           I +AL YLH    + I  ++IK  + LF  ++    KL DF L++            +  
Sbjct: 177 IFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233

Query: 59  PIGIMGFVATEYVTTGD--YNEKCDVFS 84
             G   FVA E + T +  Y  KCD +S
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWS 261

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  +IL   D   KL DF     I       K +  +G
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI--TPEQSKRSTMVG 178

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
              ++A E VT   Y  K D++S 
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSL 202

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
           IL  E+ V K+ DF LA  I D E         PI      A E    G +  K DV+SF
Sbjct: 311 ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT---APEAALYGRFTIKSDVWSF 367

Query: 86  AGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQV-------QAFVELAVKC 138
            G             E  T   +  P +     +   E+  ++       ++  +L  +C
Sbjct: 368 -GILLT---------ELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQC 417

Query: 139 VSESAEDRPTMIDVAKQL 156
             +  E+RPT   +   L
Sbjct: 418 WRKEPEERPTFEYLQAFL 435

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 39.5 bits (93), Expect = 2e-04
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 36/175 (20%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKD---AI 58
           + A  + YL     +  + +++   + L  E +V K+ DF ++    DG          +
Sbjct: 221 DAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV 277

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFA---------GDR---HWLLNRVKKHIECNTFD 106
           P+      A E +  G Y+ + DV+SF          G     +    + ++ +E     
Sbjct: 278 PVKWT---APEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRL 334

Query: 107 EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
                    ELC           A   L  +C +     RP+   + ++L+   +
Sbjct: 335 P------CPELC---------PDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 21/88 (23%), Positives = 44/88 (50%), Gaps = 12/88 (13%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +  A+++LH      IV +++K  +IL D++   +L DF  +  +  GE  +++    G 
Sbjct: 209 LLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK-LREL--CGT 262

Query: 63  MGFVATE------YVTTGDYNEKCDVFS 84
            G++A E        T   Y ++ D+++
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWA 290

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 5/53 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGET 52
           EI +AL YLH    + +V++++KL +++ D+D H+ K+ DF L  E I DG T
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHI-KITDFGLCKEGIKDGAT 305

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 39.3 bits (92), Expect = 2e-04
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  ALAYLH    + ++ ++IK  SIL   D   KL DF     I   +   K    +G
Sbjct: 149 AVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI--SKDVPKRKSLVG 203

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
              ++A E ++   Y  + D++S 
Sbjct: 204 TPYWMAPEVISRSLYATEVDIWSL 227

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 39.0 bits (91), Expect = 3e-04
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 5/52 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGET 52
           EI   L  LH      IV++++K  +IL D+  H+ ++ D  LA  +P+G+T
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHI-RISDLGLAVHVPEGQT 341

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  A+AYLH      IV +++K  ++L+     D   K+ DF L++ +      +K    
Sbjct: 157 ILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL-MKTVC- 211

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G  G+ A E +    Y  + D++S
Sbjct: 212 -GTPGYCAPEILRGCAYGPEVDMWS 235

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 6/53 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGET 52
           EI +AL YLH    R +V+++IKL +++ D+D H+ K+ DF L  E I DG T
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHI-KITDFGLCKEGISDGAT 161

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +  A+  +H      IV  ++K ++ L  +  + KL DF +A  +    T +     +G
Sbjct: 163 NMLEAVHTIH---QHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVG 218

Query: 62  ---------IMGFVATEYVTTGD--YNEKCDVFS 84
                    I    ++          + K DV+S
Sbjct: 219 AVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 9/86 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVA-KLFDFSLAESIPDGETHIKDAI 58
           I   + YLH    + +V +++K S+IL+     +  + ++ DF  A+ +      +    
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMT-- 179

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFS 84
           P     FVA E +    Y+  CD++S
Sbjct: 180 PCYTANFVAPEVLERQGYDAACDIWS 205

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 38.5 bits (90), Expect = 4e-04
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L YLH       + ++IK +++L  E    KL DF +A  + D  T IK    +G
Sbjct: 127 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD--TQIKRNTFVG 181

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF 85
              ++A E +    Y+ K D++S 
Sbjct: 182 TPFWMAPEVIKQSAYDSKADIWSL 205

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 38.6 bits (90), Expect = 5e-04
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 25/104 (24%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFD-------------EDHVAKLFDFSLAESIPD 49
           IA+ +A+LH      I+ +++K  +IL               E+    + DF L + +  
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180

Query: 50  GETHIKDAI--PIGIMGFVATE-------YVTTGDYNEKCDVFS 84
           G++  +  +  P G  G+ A E         T        D+FS
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 6/53 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGET 52
           EIA  L +L     + I+++++KL +++ D + H+ K+ DF +  E+I DG T
Sbjct: 129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHI-KIADFGMCKENIWDGVT 177

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+A+AL Y H    R ++ ++IK  ++L       K+ DF  +   P            G
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR----TMCG 174

Query: 62  IMGFVATEYVTTGDYNEKCDVFS 84
            + ++  E +    ++EK D++ 
Sbjct: 175 TLDYLPPEMIEGKTHDEKVDLWC 197

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 38.0 bits (89), Expect = 7e-04
 Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 6/53 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGET 52
           EI+ AL YLH    R I+++++KL ++L D + H+ KL D+ +  E +  G+T
Sbjct: 118 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHI-KLTDYGMCKEGLRPGDT 166

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 37.7 bits (88), Expect = 7e-04
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 9/85 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  ++AY H      IV +N+K  ++L     +    KL DF LA  + D E        
Sbjct: 137 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGF-- 190

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G  G+++ E +    Y++  D+++
Sbjct: 191 AGTPGYLSPEVLKKDPYSKPVDIWA 215

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGET 52
           EIA+AL YLH      IV++++K  +IL D   H+  L DF L  E+I    T
Sbjct: 147 EIASALGYLH---SLNIVYRDLKPENILLDSQGHI-VLTDFGLCKENIEHNST 195

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 28  ILFDEDHVAKLFDFSLAESIPDGE--THIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSF 85
            L  E+H+ K+ DF L+  +       H     PI      A E +    ++ K DV++F
Sbjct: 349 CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT---APESLAYNKFSIKSDVWAF 405

Query: 86  AGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQV-------QAFVELAVKC 138
            G   W         E  T+     P I      +  EKD ++       +   EL   C
Sbjct: 406 -GVLLW---------EIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 455

Query: 139 VSESAEDRPTMIDVAKQL 156
              +  DRP+  ++ +  
Sbjct: 456 WQWNPSDRPSFAEIHQAF 473

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 37.6 bits (88), Expect = 8e-04
 Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 6/53 (11%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLA-ESIPDGET 52
           EI +AL +LH    + I+++++KL ++L D + H  KL DF +  E I +G T
Sbjct: 132 EIISALMFLH---DKGIIYRDLKLDNVLLDHEGHC-KLADFGMCKEGICNGVT 180

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 37.5 bits (88), Expect = 9e-04
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 9/85 (10%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           I  ++AY H      IV +N+K  ++L     +    KL DF LA  + D E        
Sbjct: 114 ILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-WHGF-- 167

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFS 84
            G  G+++ E +    Y++  D+++
Sbjct: 168 AGTPGYLSPEVLKKDPYSKPVDIWA 192

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	163
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.98
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.98
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.98
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.98
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.98
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.98
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.98
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.98
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.98
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.98
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.98
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.98
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.98
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.98
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.98
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.98
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.98
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.98
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.98
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.97
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.97
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.97
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.97
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.97
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.97
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.97
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.97
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.96
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.95
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.94
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.93
3uqc_A	286	Probable conserved transmembrane protein; structur	99.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.88
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.67
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.46
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.16
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.73
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.74
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.55
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.28
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	96.6
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.1
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	95.65
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	95.64
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	95.18
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	95.02
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	95.0
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	94.91
3ats_A	357	Putative uncharacterized protein; hypothetical pro	94.87
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	94.84
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	94.0
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	93.63
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	93.46
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	93.39
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	93.02
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	92.87
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	92.82
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	92.65
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	92.0
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	91.7
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	91.33
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.36
3mes_A	424	Choline kinase; malaria, structural genomics, stru	88.03
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	87.95
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	85.85
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	82.58

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=254.32  Aligned_cols=157  Identities=22%  Similarity=0.276  Sum_probs=119.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc---CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~   78 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|||||.+.+   ++|+.
T Consensus       140 qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~  216 (307)
T 3omv_A          140 QTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF  216 (307)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCH
T ss_pred             HHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCc
Confidence            8999999999   89999999999999999999999999999987654433333335579999999999864   45899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhccc-chhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ-SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      ++|||||||++||+++|..||........+...+..+...+. ......++..+.+|+.+||+.||++|||+.++++.|+
T Consensus       217 ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le  296 (307)
T 3omv_A          217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE  296 (307)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred             HHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            999999999999999998888654444333333222211111 1223456788999999999999999999999999999


Q ss_pred             HHhh
Q 043958          158 QAYR  161 (163)
Q Consensus       158 ~~~~  161 (163)
                      .+..
T Consensus       297 ~l~~  300 (307)
T 3omv_A          297 LLQH  300 (307)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            8765

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.7e-44  Score=255.20  Aligned_cols=154  Identities=14%  Similarity=0.185  Sum_probs=118.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|||||.+.+..++.++|
T Consensus       166 qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sD  242 (329)
T 4aoj_A          166 QVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESD  242 (329)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHh---cCCeecccccHhhEEECCCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCcccc
Confidence            7999999999   8999999999999999999999999999998765544433333456899999999999999999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||++||+++ |..||. .....+++..+..+..   .+.+..+++++.+|+.+||+.||++|||+.++++.|+.+.
T Consensus       243 vwS~Gvvl~Ellt~G~~Pf~-~~~~~~~~~~i~~g~~---~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~  318 (329)
T 4aoj_A          243 VWSFGVVLWEIFTYGKQPWY-QLSNTEAIDCITQGRE---LERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA  318 (329)
T ss_dssp             HHHHHHHHHHHHTTSCCTTC-SSCHHHHHHHHHHTCC---CCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHcCCCCCCC-CCCHHHHHHHHHcCCC---CCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence            9999999999998 556654 4445555555544431   1223356788999999999999999999999999999987


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       319 ~~  320 (329)
T 4aoj_A          319 QA  320 (329)
T ss_dssp             HS
T ss_pred             hC
Confidence            64

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.6e-44  Score=257.99  Aligned_cols=155  Identities=18%  Similarity=0.298  Sum_probs=125.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++...............||+.|||||.+.++.|+.++|
T Consensus       193 qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksD  269 (353)
T 4ase_A          193 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  269 (353)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHhHh---hCCeecCccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCccc
Confidence            8999999999   8999999999999999999999999999998776555444444557899999999999999999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||++||+++ |..||........+... +.....+.  .+..+++++.+++.+||+.||++|||+.++++.|+++.
T Consensus       270 VwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~-i~~g~~~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll  346 (353)
T 4ase_A          270 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  346 (353)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH-HHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             EeehHHHHHHHHhCCCCCCCCCCHHHHHHHH-HHcCCCCC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            9999999999998 56666543333333333 33332222  22346788999999999999999999999999999987


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       347 q~  348 (353)
T 4ase_A          347 QA  348 (353)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.5e-44  Score=254.20  Aligned_cols=153  Identities=14%  Similarity=0.222  Sum_probs=126.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|||||.+.++.|+.++|
T Consensus       136 qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~D  212 (299)
T 4asz_A          136 QIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESD  212 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhh
Confidence            8999999999   8999999999999999999999999999998765544433333456899999999999999999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||++||+++ |..||. .....+++..+..+...   +.+..+++++.+|+.+||+.||++|||+.++.+.|+++.
T Consensus       213 VwS~Gvvl~Ellt~G~~Pf~-~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          213 VWSLGVVLWEIFTYGKQPWY-QLSNNEVIECITQGRVL---QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HHHHHHHHHHHHTTTCCTTT-TSCHHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999998 555554 44555666665554321   223346788999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       289 ~  289 (299)
T 4asz_A          289 K  289 (299)
T ss_dssp             H
T ss_pred             h
Confidence            5

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.4e-44  Score=254.16  Aligned_cols=152  Identities=16%  Similarity=0.234  Sum_probs=124.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++...............||+.|||||.+.++.|+.++|
T Consensus       153 qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksD  229 (308)
T 4gt4_A          153 QIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSD  229 (308)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCCCCCCccccceEECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccch
Confidence            7999999999   8999999999999999999999999999998765443333333457899999999999999999999


Q ss_pred             eeecchhhHHHhhh-ccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNR-VKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||++||+++. ..|| ......+++..+..+..   .+.+..++..+.+|+.+||+.||++|||+.+|++.|+...
T Consensus       230 VwSfGvvl~El~t~g~~Pf-~~~~~~~~~~~i~~~~~---~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          230 IWSYGVVLWEVFSYGLQPY-CGYSNQDVVEMIRNRQV---LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHHHHHHHHTTTCCTT-TTCCHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             hhhHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHcCCC---CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            99999999999984 5555 44455556555544432   2223456788999999999999999999999999998653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=4.3e-42  Score=244.36  Aligned_cols=155  Identities=17%  Similarity=0.207  Sum_probs=121.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCc---ccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETH---IKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      ||+.||+|||   +++|+||||||+|||++.+| .+||+|||+++........   .......||+.|||||.+.+..|+
T Consensus       158 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~  234 (336)
T 4g3f_A          158 QALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCD  234 (336)
T ss_dssp             HHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCC
Confidence            8999999999   99999999999999999988 5999999999876543321   122345699999999999999999


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      .++||||+||++|+|++|..||... ...+++..+....... ...+..+++.+.+++.+||+.||++|||+.|+++.|.
T Consensus       235 ~~~DiwSlGvilyemltG~~Pf~~~-~~~~~~~~i~~~~~~~-~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~  312 (336)
T 4g3f_A          235 AKVDIWSSCCMMLHMLNGCHPWTQY-FRGPLCLKIASEPPPI-REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG  312 (336)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSTTT-CCSCCHHHHHHSCCGG-GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHHcCCCCc-hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence            9999999999999999999887543 3334444444433211 1223456788999999999999999999999999888


Q ss_pred             HHhh
Q 043958          158 QAYR  161 (163)
Q Consensus       158 ~~~~  161 (163)
                      ...+
T Consensus       313 ~~l~  316 (336)
T 4g3f_A          313 KALQ  316 (336)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7.9e-42  Score=243.70  Aligned_cols=146  Identities=17%  Similarity=0.210  Sum_probs=120.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.+|.+||+|||+++.........  ....||+.|||||.+.+..|+.++|
T Consensus       178 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~D  252 (346)
T 4fih_A          178 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVD  252 (346)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcc--cccccCcCcCCHHHHCCCCCCcHHH
Confidence            7999999999   8999999999999999999999999999998775443322  2457999999999999899999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++|+|++|..||.... ..+++..+... ..+........++++++|+.+||..||++|||+.|+++
T Consensus       253 iWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          253 IWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDN-LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHS-SCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHcC-CCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999999999998886543 33344433332 22333344567789999999999999999999999986

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.5e-41  Score=237.76  Aligned_cols=143  Identities=22%  Similarity=0.321  Sum_probs=114.8

Q ss_pred             hHHHHHHHHhcCCCCC--eEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +++  |+||||||+|||++ .++.+||+|||+|+.......    ....||+.|||||.+. ++|+.
T Consensus       137 qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~----~~~~GTp~YmAPE~~~-~~y~~  208 (290)
T 3fpq_A          137 QILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA----KAVIGTPEFMAPEMYE-EKYDE  208 (290)
T ss_dssp             HHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB----EESCSSCCCCCGGGGG-TCCCT
T ss_pred             HHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCcc----CCcccCccccCHHHcC-CCCCc
Confidence            7999999999   777  99999999999997 589999999999975443222    2447999999999876 46999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+||++|+|++|..||........+...+..+..  +.......++++++|+.+||+.||++|||+.++++
T Consensus       209 ~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          209 SVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999998765555555544443321  11223335578999999999999999999999986

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.8e-41  Score=238.77  Aligned_cols=144  Identities=21%  Similarity=0.277  Sum_probs=122.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++............+..||+.|||||.+.+..|+.++|
T Consensus       140 qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~D  216 (311)
T 4aw0_A          140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD  216 (311)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHH
Confidence            8999999999   8999999999999999999999999999998876554444444667999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~  153 (163)
                      +||+||++|+|++|..||.. ....+++..+....+.++    ...++++++|+.+||..||++|||++|++
T Consensus       217 iWSlGvilyeml~G~~PF~~-~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          217 LWALGCIIYQLVAGLPPFRA-GNEGLIFAKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHTCCCCC----TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCCC----cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            99999999999999888754 455566666666654332    23567899999999999999999998864

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=8.3e-41  Score=236.04  Aligned_cols=161  Identities=17%  Similarity=0.219  Sum_probs=116.1

Q ss_pred             hHHHHHHHHhcC-----CCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCccccccC
Q 043958            2 EIANALAYLHVG-----FPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~-----~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~   74 (163)
                      |++.||+|||..     ..++|+||||||+|||++.++.+||+|||+++.........  ......||+.|||||++.+.
T Consensus       108 ~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~  187 (303)
T 3hmm_A          108 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  187 (303)
T ss_dssp             HHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhccc
Confidence            789999999931     01299999999999999999999999999998765443322  22235699999999998754


Q ss_pred             ------CCCcccceeecchhhHHHhhhccccccccch--------------hhccchhhhhhhccc---chhhHHHHHHH
Q 043958           75 ------DYNEKCDVFSFAGDRHWLLNRVKKHIECNTF--------------DEIVDPVIREELCIQ---SSEKDKQVQAF  131 (163)
Q Consensus        75 ------~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~---~~~~~~~~~~~  131 (163)
                            .++.++|||||||++||++++..++......              .++...+.....++.   ......++..+
T Consensus       188 ~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l  267 (303)
T 3hmm_A          188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM  267 (303)
T ss_dssp             SCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHH
T ss_pred             ccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHH
Confidence                  3677999999999999999987654321111              111111122222111   11233567789


Q ss_pred             HHHHHhccccCcCCCCCHHHHHHHHHHHhhc
Q 043958          132 VELAVKCVSESAEDRPTMIDVAKQLRQAYRF  162 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~~  162 (163)
                      .+|+.+||+.||++|||+.++++.|+++.+.
T Consensus       268 ~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          268 AKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=6.2e-41  Score=244.35  Aligned_cols=146  Identities=17%  Similarity=0.210  Sum_probs=119.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.+|.+||+|||+++.........  ....||+.|||||.+.+..|+.++|
T Consensus       255 qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~--~~~~GTp~YmAPEvl~~~~y~~~~D  329 (423)
T 4fie_A          255 AVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR--KSLVGTPYWMAPELISRLPYGPEVD  329 (423)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCB--CCCEECTTTCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccc--cccccCcCcCCHHHHCCCCCCcHHH
Confidence            7999999999   8999999999999999999999999999998775443322  2457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++|+|++|..||.... ..+++..+... ..+........++++++|+.+||..||++|||+.|+++
T Consensus       330 iWSlGvilyeml~G~~PF~~~~-~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          330 IWSLGIMVIEMVDGEPPYFNEP-PLKAMKMIRDN-LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSC-HHHHHHHHHHS-CCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCcC-HHHHHHHHHcC-CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999999999998886543 33344433332 22233334456788999999999999999999999986

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.2e-40  Score=231.38  Aligned_cols=142  Identities=19%  Similarity=0.254  Sum_probs=109.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++........   ....||+.|||||.+.+..+ +.++
T Consensus       120 qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~---~~~~GT~~Y~APE~~~~~~y~~~~~  193 (275)
T 3hyh_A          120 QIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFL---KTSCGSPNYAAPEVISGKLYAGPEV  193 (275)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC------------------CTTSCHHHHSSSSCCCTHH
T ss_pred             HHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCcc---CCeeECcccCChhhhcCCCCCCChh
Confidence            8999999999   899999999999999999999999999999766543322   23479999999999998876 5789


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||+||++|+|++|..||. .....+++..+....+..+    ...++++++|+.+||+.||++|||+.++++
T Consensus       194 DiwSlGvily~lltg~~PF~-~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          194 DVWSCGVILYVMLCRRLPFD-DESIPVLFKNISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHCCCCCC-CCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            99999999999999988875 3445555555555543322    235678999999999999999999999987

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=1.5e-41  Score=242.54  Aligned_cols=144  Identities=19%  Similarity=0.256  Sum_probs=119.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.+|.+||+|||+++........  .....||+.|||||.+.+..|+.++|
T Consensus       133 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~--~~~~~GT~~YmAPE~l~~~~y~~~~D  207 (350)
T 4b9d_A          133 QICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL--ARACIGTPYYLSPEICENKPYNNKSD  207 (350)
T ss_dssp             HHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHH--HHHHHSCCTTCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCccc--ccccCCCccccCHHHHCCCCCCcHHH
Confidence            8999999999   899999999999999999999999999999766432211  12346999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++|+|++|..||.. ....+++..+....+..   .....++++++|+.+||+.||++|||+.++++
T Consensus       208 iwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~~~---~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          208 IWALGCVLYELCTLKHAFEA-GSMKNLVLKIISGSFPP---VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHcCCCCC---CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999888764 44555666666554322   22345678999999999999999999999986

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.7e-40  Score=231.84  Aligned_cols=143  Identities=22%  Similarity=0.258  Sum_probs=115.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.+|.+||+|||+++.........  ....||+.|||||.+.+..|+.++|
T Consensus       134 qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~--~~~~GT~~YmAPE~~~~~~y~~~~D  208 (304)
T 3ubd_A          134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKA--YSFCGTVEYMAPEVVNRRGHTQSAD  208 (304)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCC--CSCCCCGGGCCHHHHHTSCCCTHHH
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccc--cccccCcccCCHHHhccCCCCCCCc
Confidence            7999999999   8999999999999999999999999999997654433222  2457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH-----HHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM-----IDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~~i~~  154 (163)
                      +||+||++|+|++|..||.. ....+++..+.......    +...++++++|+.+||+.||++|||+     +++++
T Consensus       209 iwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          209 WWSFGVLMFEMLTGTLPFQG-KDRKETMTMILKAKLGM----PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCC----CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             ccchHHHHHHHHhCCCCCCC-cCHHHHHHHHHcCCCCC----CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            99999999999999888764 44455666655554332    22356789999999999999999984     56664

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=5.4e-40  Score=231.22  Aligned_cols=144  Identities=22%  Similarity=0.300  Sum_probs=104.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc----------cccCccccccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI----------KDAIPIGIMGFVATEYV   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~   71 (163)
                      ||++||+|||   +++|+||||||+|||++.++.+||+|||+++.........          ......||+.|||||.+
T Consensus       126 qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~  202 (299)
T 4g31_A          126 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI  202 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCCCC--------------------------CCCTTSCHHHH
T ss_pred             HHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHH
Confidence            8899999999   8999999999999999999999999999998765432211          11234699999999999


Q ss_pred             ccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           72 TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        72 ~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      .+..|+.++||||+||++|+|++   ||.........+.......   ..+.....++.+.+|+.+||+.||++|||+.+
T Consensus       203 ~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~---~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~e  276 (299)
T 4g31_A          203 HGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLK---FPPLFTQKYPCEYVMVQDMLSPSPMERPEAIN  276 (299)
T ss_dssp             TTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTC---CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCC---CCCCCcccCHHHHHHHHHHcCCChhHCcCHHH
Confidence            99999999999999999999985   5432222222222222221   12233455677889999999999999999999


Q ss_pred             HHH
Q 043958          152 VAK  154 (163)
Q Consensus       152 i~~  154 (163)
                      +++
T Consensus       277 il~  279 (299)
T 4g31_A          277 IIE  279 (299)
T ss_dssp             HHT
T ss_pred             Hhc
Confidence            986

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=4.9e-38  Score=226.41  Aligned_cols=150  Identities=19%  Similarity=0.164  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCc--------------------------c
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETH--------------------------I   54 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~--------------------------~   54 (163)
                      |++.||+|||   +++|+||||||+|||++.+ +.+||+|||+|+........                          .
T Consensus       125 qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (361)
T 4f9c_A          125 NLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQ  201 (361)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC----------------------
T ss_pred             HHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccc
Confidence            8999999999   8999999999999999876 79999999999765433211                          1


Q ss_pred             cccCccccccccCccccccCC-CCcccceeecchhhHHHhhhccccccccchhhccchhhhh------------------
Q 043958           55 KDAIPIGIMGFVATEYVTTGD-YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE------------------  115 (163)
Q Consensus        55 ~~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~------------------  115 (163)
                      ......||+.|+|||.+.+.+ ++.++|+||+||++++|++|..||+......+.+..+...                  
T Consensus       202 ~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~  281 (361)
T 4f9c_A          202 QVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSIL  281 (361)
T ss_dssp             ----CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEE
T ss_pred             cccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhcccccc
Confidence            112346999999999998754 8899999999999999999999987654322222111100                  


Q ss_pred             --------------------hh------------cccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          116 --------------------EL------------CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       116 --------------------~~------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                                          ..            ..........++++++|+.+||..||++|+|++|+++
T Consensus       282 ~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          282 CSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             ESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                                00            0000011224567899999999999999999999986

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.7e-37  Score=225.83  Aligned_cols=149  Identities=14%  Similarity=0.149  Sum_probs=112.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC--cccccCccccccccCccccccC-CCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET--HIKDAIPIGIMGFVATEYVTTG-DYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~~-~~~~   78 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+|++|||+++.......  ........||+.|||||.+.+. .++.
T Consensus       166 qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~  242 (398)
T 4b99_A          166 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQ  242 (398)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCT
T ss_pred             HHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCC
Confidence            8999999999   89999999999999999999999999999987644321  2222356799999999998875 4688


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccc---------------------------hhhHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS---------------------------SEKDKQVQAF  131 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~  131 (163)
                      ++||||+||++++|++|..||...... +.+..+......+..                           ......++++
T Consensus       243 ~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  321 (398)
T 4b99_A          243 AIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQA  321 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHH
T ss_pred             hhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHH
Confidence            999999999999999999888654332 222222211100000                           0011235789


Q ss_pred             HHHHHhccccCcCCCCCHHHHHH
Q 043958          132 VELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+|+.+||..||++|||+.++++
T Consensus       322 ~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          322 LSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHCcCChhHCcCHHHHhc
Confidence            99999999999999999999886

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=6.5e-37  Score=231.91  Aligned_cols=146  Identities=18%  Similarity=0.194  Sum_probs=122.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC--CCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||+|||   +++|+||||||+|||++.+  +.+||+|||+++.........   ...||+.|||||.+.+..|+.+
T Consensus       263 qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~---~~~GT~~y~APEv~~~~~y~~~  336 (573)
T 3uto_A          263 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK---VTTGTAEFAAPEVAEGKPVGYY  336 (573)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEE---EECSSGGGCCHHHHTTCCBCHH
T ss_pred             HHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCcee---eeEECccccCHHHhCCCCCCcH
Confidence            8999999999   8999999999999999754  899999999998876543322   3469999999999999999999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+||++|+|++|..||.. ....+++..+......+........+..+++||.+||..||++|||+.++++
T Consensus       337 ~DiWSlGvilyeml~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          337 TDMWSVGVLSYILLSGLSPFGG-ENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCC-SSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCCCCCC-cCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999888764 3445556666555555555555567889999999999999999999999986

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.1e-36  Score=218.98  Aligned_cols=153  Identities=17%  Similarity=0.250  Sum_probs=122.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.+||+|||+++...............+++.|+|||.+.+..++.++|
T Consensus       211 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  287 (370)
T 2psq_A          211 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  287 (370)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999998766544333333345778899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+ ......++........   .......++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       288 vwslG~il~ellt~g~~p~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          288 VWSFGVLMWEIFTLGGSPY-PGIPVEELFKLLKEGH---RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             HHHHHHHHHHHHTTSCCSS-TTCCGGGHHHHHHTTC---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 55554 4444444444333322   11222345678999999999999999999999999999987


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       364 ~  364 (370)
T 2psq_A          364 T  364 (370)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=6e-36  Score=212.88  Aligned_cols=158  Identities=21%  Similarity=0.240  Sum_probs=120.1

Q ss_pred             hHHHHHHHHhcCCCC----------CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccc
Q 043958            2 EIANALAYLHVGFPR----------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~----------~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~   71 (163)
                      |++.||+|||   +.          +++||||||+||+++.++.+||+|||+++...............+|+.|+|||.+
T Consensus       129 qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~  205 (322)
T 3soc_A          129 TMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVL  205 (322)
T ss_dssp             HHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHH
T ss_pred             HHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCccccccCccCccccCHhhc
Confidence            7899999999   88          9999999999999999999999999999877655444333345789999999998


Q ss_pred             ccC-----CCCcccceeecchhhHHHhhhccccccccchh---------------hccchhhhhhhccc---chhhHHHH
Q 043958           72 TTG-----DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFD---------------EIVDPVIREELCIQ---SSEKDKQV  128 (163)
Q Consensus        72 ~~~-----~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~---~~~~~~~~  128 (163)
                      .+.     .++.++||||+|+++|+++++..||.......               .+..........+.   .......+
T Consensus       206 ~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (322)
T 3soc_A          206 EGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGM  285 (322)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHH
T ss_pred             ccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchH
Confidence            763     45668899999999999999988875432111               11111111111111   11123456


Q ss_pred             HHHHHHHHhccccCcCCCCCHHHHHHHHHHHhhc
Q 043958          129 QAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRF  162 (163)
Q Consensus       129 ~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~~  162 (163)
                      ..+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       286 ~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          286 AMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            7799999999999999999999999999998764

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=6.4e-36  Score=227.42  Aligned_cols=142  Identities=22%  Similarity=0.279  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      ||+.||+|||   +++|+||||||+|||++.+|.+||+|||+|+.......    .+..||+.|||||.+.+ ..|+.++
T Consensus       300 qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~----~t~~GTp~YmAPEvl~~~~~y~~~v  372 (689)
T 3v5w_A          300 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAYDSSA  372 (689)
T ss_dssp             HHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCC----CSCCSCGGGCCHHHHSTTCCCCTHH
T ss_pred             HHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCCCCC----CCccCCcCccCHHHHhCCCCCCcHH
Confidence            7999999999   99999999999999999999999999999987654432    24579999999999975 5799999


Q ss_pred             ceeecchhhHHHhhhccccccccc--hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNT--FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVA  153 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~  153 (163)
                      |+||+||++|+|++|..||.....  ..++...+.....    ..+...++++++|+.+||..||.+|++     +++++
T Consensus       373 DiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~----~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          373 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV----ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC----CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC----CCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            999999999999999999864322  2223333333322    222346788999999999999999998     56665


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      +
T Consensus       449 ~  449 (689)
T 3v5w_A          449 E  449 (689)
T ss_dssp             T
T ss_pred             c
Confidence            4

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=2e-35  Score=213.36  Aligned_cols=156  Identities=14%  Similarity=0.079  Sum_probs=119.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC--CCCCeEECccccccccCCCCCcc-----cccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~~   74 (163)
                      ||+.||+|||   +.+++||||||+|||++  .++.+||+|||+++.........     ......||+.|+|||.+.+.
T Consensus       160 qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  236 (364)
T 3op5_A          160 RILDILEYIH---EHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV  236 (364)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC
T ss_pred             HHHHHHHHHH---HCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC
Confidence            7899999999   89999999999999998  88999999999997765432211     11234589999999999988


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccch-hh------HHHHHHHHHHHHhccccCcCCCC
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS-EK------DKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      .++.++||||||+++++++++..||................ ...... ..      ..++..+.+++..||+.+|++||
T Consensus       237 ~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP  315 (364)
T 3op5_A          237 APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIR-YRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKP  315 (364)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHH-HHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHH-hhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCC
Confidence            89999999999999999999988876433222221111111 000000 01      22367899999999999999999


Q ss_pred             CHHHHHHHHHHHhh
Q 043958          148 TMIDVAKQLRQAYR  161 (163)
Q Consensus       148 t~~~i~~~L~~~~~  161 (163)
                      ++.++++.|+++.+
T Consensus       316 ~~~~l~~~l~~~~~  329 (364)
T 3op5_A          316 LYENLRDILLQGLK  329 (364)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999998865

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.1e-35  Score=210.87  Aligned_cols=157  Identities=17%  Similarity=0.248  Sum_probs=118.8

Q ss_pred             hHHHHHHHHhcCCCC---------CeEeccCCCCCeeeCCCCCeEECccccccccCCCCC------cccccCcccccccc
Q 043958            2 EIANALAYLHVGFPR---------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------HIKDAIPIGIMGFV   66 (163)
Q Consensus         2 qi~~~l~~lh~~~~~---------~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~~~   66 (163)
                      |++.||+|||   +.         +++||||||+||+++.++.+||+|||++........      ........||..|+
T Consensus       119 qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~  195 (336)
T 3g2f_A          119 SVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM  195 (336)
T ss_dssp             HHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGC
T ss_pred             HHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCccccccccccCCCcccee
Confidence            7899999999   78         999999999999999999999999999987654321      11112346899999


Q ss_pred             Ccccccc-------CCCCcccceeecchhhHHHhhhccccccccchhhccchhh---------------------hhhhc
Q 043958           67 ATEYVTT-------GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVI---------------------REELC  118 (163)
Q Consensus        67 ~PE~~~~-------~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~  118 (163)
                      |||.+.+       ..++.++||||+|+++|+++++..|++......+......                     .....
T Consensus       196 aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (336)
T 3g2f_A          196 APEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFP  275 (336)
T ss_dssp             CHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCC
T ss_pred             CchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCC
Confidence            9999876       3456789999999999999999888765443222111110                     01111


Q ss_pred             ccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958          119 IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus       119 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      .........+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       276 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~  318 (336)
T 3g2f_A          276 EAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMM  318 (336)
T ss_dssp             TTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence            1112233467789999999999999999999999999999875

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=4.1e-36  Score=214.11  Aligned_cols=153  Identities=20%  Similarity=0.258  Sum_probs=118.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||+++...............++..|+|||.+.+..++.++|
T Consensus       125 qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  201 (327)
T 3poz_A          125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD  201 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999998776554443333445678899999999999999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|++++++++ +..|+. .....++........   .......++..+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       202 i~slG~il~ellt~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          202 VWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGE---RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHHHHHHHTTSCCTTT-TCCGGGHHHHHHTTC---CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHhcCCCCcc-CCCHHHHHHHHHcCC---CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            9999999999999 665553 333333333222221   11222345678999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       278 ~  278 (327)
T 3poz_A          278 R  278 (327)
T ss_dssp             T
T ss_pred             h
Confidence            4

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=3.3e-35  Score=206.58  Aligned_cols=157  Identities=10%  Similarity=0.103  Sum_probs=121.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC-----eEECccccccccCCCCCc-----ccccCccccccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-----AKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYV   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~-----~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~   71 (163)
                      |++.||+|||   +.+++||||||+||+++.++.     ++|+|||++.........     .......|+..|+|||.+
T Consensus       114 qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  190 (298)
T 1csn_A          114 QMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH  190 (298)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhh
Confidence            7899999999   899999999999999987776     999999999876544322     112345689999999999


Q ss_pred             ccCCCCcccceeecchhhHHHhhhcccccccc--chhhccchhhhhhhccc-chhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           72 TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECN--TFDEIVDPVIREELCIQ-SSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        72 ~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      .+..++.++||||+|+++++++++..|+....  ...+............. .......++.+.+++.+||+.+|++|||
T Consensus       191 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~  270 (298)
T 1csn_A          191 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPD  270 (298)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCC
T ss_pred             cCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCC
Confidence            98889999999999999999999998876532  22222222222221111 1112245678999999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 043958          149 MIDVAKQLRQAYR  161 (163)
Q Consensus       149 ~~~i~~~L~~~~~  161 (163)
                      +.++++.|+++.+
T Consensus       271 ~~~l~~~l~~~~~  283 (298)
T 1csn_A          271 YDYLQGLFSKVLE  283 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999865

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=6.6e-36  Score=215.13  Aligned_cols=154  Identities=18%  Similarity=0.301  Sum_probs=121.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       201 ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  277 (359)
T 3vhe_A          201 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  277 (359)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999998765544433333456888999999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|++++++++ +..|+........+... .......  ......++.+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       278 i~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          278 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRR-LKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH-HHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHhcCCCCCCccchhHHHHHH-HHcCCCC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            9999999999998 76666543333322222 2222111  122335678999999999999999999999999999987


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       355 ~  355 (359)
T 3vhe_A          355 Q  355 (359)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=7.1e-36  Score=216.63  Aligned_cols=153  Identities=17%  Similarity=0.237  Sum_probs=118.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.+||+|||+++...............++..|+|||.+.++.++.++|
T Consensus       221 qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  297 (377)
T 3cbl_A          221 DAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESD  297 (377)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHH
T ss_pred             HHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997654432222221223567899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+. .....+.......+.   ..+.+..++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       298 vwslG~il~el~t~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          298 VWSFGILLWETFSLGASPYP-NLSNQQTREFVEKGG---RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             HHHHHHHHHHHHTTSCCSST-TSCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            9999999999998 555543 333333333322221   11222345678999999999999999999999999999986


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       374 ~  374 (377)
T 3cbl_A          374 K  374 (377)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.1e-35  Score=211.71  Aligned_cols=153  Identities=20%  Similarity=0.310  Sum_probs=119.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||+++...............++..|+|||.+.+..++.++|
T Consensus       123 qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  199 (325)
T 3kex_A          123 QIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSD  199 (325)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhH
Confidence            7899999999   8999999999999999999999999999998876554443333456778999999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....++.........   ......++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       200 i~slG~~l~el~~~g~~p~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          200 VWSYGVTVWELMTFGAEPYA-GLRLAEVPDLLEKGER---LAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             HHHHHHHHHHHHTTSCCTTT-TSCTTHHHHHHHTTCB---CCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             hHHhHHHHHHHHhCCCCCcc-ccCHHHHHHHHHcCCC---CCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 666654 3333333333222211   1112234567899999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       276 ~  276 (325)
T 3kex_A          276 R  276 (325)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=1.3e-35  Score=210.99  Aligned_cols=155  Identities=18%  Similarity=0.275  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       145 qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  221 (323)
T 3qup_A          145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSD  221 (323)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999997765544333333345677899999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||+|+++++++++..+++......+..........   .......+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       222 i~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~  298 (323)
T 3qup_A          222 VWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNR---LKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG  298 (323)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC---CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCC---CCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            999999999999944444444444444443333321   12223456789999999999999999999999999999875


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       299 ~  299 (323)
T 3qup_A          299 H  299 (323)
T ss_dssp             C
T ss_pred             H
Confidence            3

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-35  Score=214.35  Aligned_cols=153  Identities=18%  Similarity=0.243  Sum_probs=122.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++................++..|+|||.+.+..++.++|
T Consensus       199 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  275 (382)
T 3tt0_A          199 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  275 (382)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhH
Confidence            7899999999   8999999999999999999999999999998765544333333445778899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|++++++++ +..|+ ......++.........   ......++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       276 iwslG~il~ellt~g~~p~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          276 VWSFGVLLWEIFTLGGSPY-PGVPVEELFKLLKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             HHHHHHHHHHHHTTSCCSS-TTCCHHHHHHHHHTTCC---CCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHcCCC---CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 55554 44444444444333321   1122345678999999999999999999999999999986


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       352 ~  352 (382)
T 3tt0_A          352 A  352 (382)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=9.5e-35  Score=206.48  Aligned_cols=157  Identities=29%  Similarity=0.457  Sum_probs=122.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.++.+|++|||++................|+..|+|||.+.+..++.++|
T Consensus       147 ~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  223 (321)
T 2qkw_B          147 GAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSD  223 (321)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHH
T ss_pred             HHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccc
Confidence            7899999999   8999999999999999999999999999997655433322223446899999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhh-------hh------hhcccchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVI-------RE------ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~-------~~------~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      |||+|+++++++++..|+....+.. ......       ..      ............+..+.+++.+||+.||++|||
T Consensus       224 i~slG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  302 (321)
T 2qkw_B          224 VYSFGVVLFEVLCARSAIVQSLPRE-MVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS  302 (321)
T ss_dssp             HHHHHHHHHHHHHCCTTCSCSSSSS-CCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCC
T ss_pred             hHhHHHHHHHHHhCCCcccccCcHH-HHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcC
Confidence            9999999999999998876433221 111000       00      001112234567889999999999999999999


Q ss_pred             HHHHHHHHHHHhhc
Q 043958          149 MIDVAKQLRQAYRF  162 (163)
Q Consensus       149 ~~~i~~~L~~~~~~  162 (163)
                      +.++++.|+.+.+.
T Consensus       303 ~~ell~~L~~~l~~  316 (321)
T 2qkw_B          303 MGDVLWKLEYALRL  316 (321)
T ss_dssp             HHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999988753

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=3.3e-35  Score=207.87  Aligned_cols=155  Identities=24%  Similarity=0.337  Sum_probs=117.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc------------ccCccccccccCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK------------DAIPIGIMGFVATE   69 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~------------~~~~~~~~~~~~PE   69 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++...........            .....||+.|+|||
T Consensus       116 qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  192 (310)
T 3s95_A          116 DIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE  192 (310)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHH
T ss_pred             HHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHH
Confidence            7899999999   89999999999999999999999999999977654332211            11346899999999


Q ss_pred             ccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           70 YVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        70 ~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      .+.+..++.++||||+|+++++++++..++..................  .......+++.+.+++.+||+.||++|||+
T Consensus       193 ~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~  270 (310)
T 3s95_A          193 MINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFL--DRYCPPNCPPSFFPITVRCCDLDPEKRPSF  270 (310)
T ss_dssp             HHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHH--HHTCCTTCCTTHHHHHHHHTCSSGGGSCCH
T ss_pred             HhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccc--cccCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            999989999999999999999999998776543322211111111110  011122345679999999999999999999


Q ss_pred             HHHHHHHHHHhh
Q 043958          150 IDVAKQLRQAYR  161 (163)
Q Consensus       150 ~~i~~~L~~~~~  161 (163)
                      .++++.|+++..
T Consensus       271 ~~l~~~L~~l~~  282 (310)
T 3s95_A          271 VKLEHWLETLRM  282 (310)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998754

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=8.5e-35  Score=204.19  Aligned_cols=157  Identities=13%  Similarity=0.204  Sum_probs=121.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcc-----cccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.||+|||   +.+++||||||+||++   +.++.+||+|||++..........     ......++..|+|||.+.+
T Consensus       113 qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 4hgt_A          113 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcC
Confidence            7899999999   8999999999999999   788999999999998765443221     1224568999999999998


Q ss_pred             CCCCcccceeecchhhHHHhhhccccccccch--hhccchhhhhhhcccc-hhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTF--DEIVDPVIREELCIQS-SEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      ..++.++||||+|+++++++++..||......  .+.............. ......+..+.+++.+||+.+|++|||+.
T Consensus       190 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~  269 (296)
T 4hgt_A          190 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYS  269 (296)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHH
T ss_pred             CCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHH
Confidence            89999999999999999999999887643221  1122222222211111 11123467899999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 043958          151 DVAKQLRQAYR  161 (163)
Q Consensus       151 ~i~~~L~~~~~  161 (163)
                      ++++.|+++.+
T Consensus       270 ~l~~~l~~~~~  280 (296)
T 4hgt_A          270 YLRQLFRNLFH  280 (296)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.5e-35  Score=211.21  Aligned_cols=153  Identities=20%  Similarity=0.260  Sum_probs=113.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       125 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  201 (327)
T 3lzb_A          125 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD  201 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHH
Confidence            7899999999   8999999999999999999999999999998765444333333345677899999999999999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|++++++++ +..|+ ......++........   ..+.....+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       202 i~slG~il~ell~~g~~p~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          202 VWSYGVTVWELMTFGSKPY-DGIPASEISSILEKGE---RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHHHHHHHTTSCCTT-TTCCGGGHHHHHHTTC---CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCC-CCCCHHHHHHHHHcCC---CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999999 65554 3433333333322222   11222335678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       278 ~  278 (327)
T 3lzb_A          278 R  278 (327)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.4e-35  Score=207.43  Aligned_cols=153  Identities=22%  Similarity=0.270  Sum_probs=112.3

Q ss_pred             hHHHHHHHHhcCCCCC--eEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||+|||   +.+  ++||||||+||+++.++.+||+|||+++........  .....|+..|+|||.+.+..++.+
T Consensus       145 qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~  219 (309)
T 3p86_A          145 DVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNEK  219 (309)
T ss_dssp             HHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTT
T ss_pred             HHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccc--cccCCCCccccChhhhcCCCCCch
Confidence            7899999999   888  999999999999999999999999999755433221  123468899999999998889999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||||+|+++++++++..||..... .+.........  .........++.+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       220 ~DiwslG~il~elltg~~Pf~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~  296 (309)
T 3p86_A          220 SDVYSFGVILWELATLQQPWGNLNP-AQVVAAVGFKC--KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL  296 (309)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTTTSCH-HHHHHHHHHSC--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhcC--CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            9999999999999999888754332 22222221111  11122234567899999999999999999999999999998


Q ss_pred             hhc
Q 043958          160 YRF  162 (163)
Q Consensus       160 ~~~  162 (163)
                      .+.
T Consensus       297 ~~~  299 (309)
T 3p86_A          297 IKS  299 (309)
T ss_dssp             HC-
T ss_pred             HHh
Confidence            753

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4.6e-35  Score=206.24  Aligned_cols=146  Identities=21%  Similarity=0.311  Sum_probs=117.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++..........  ....|++.|+|||.+.+..++.++|
T Consensus       124 qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  198 (297)
T 3fxz_A          124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  198 (297)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB--CCCCSCGGGCCHHHHHCSCBCTHHH
T ss_pred             HHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccccc--CCccCCcCccChhhhcCCCCCcHHH
Confidence            7899999999   8999999999999999999999999999997765443322  2346899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+|+++++++++..||.................  .........+..+.+++.+||+.||++|||+.++++
T Consensus       199 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          199 IWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT--PELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS--CCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            99999999999999988865544333222221111  222233456778999999999999999999999986

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=3.6e-35  Score=207.71  Aligned_cols=153  Identities=18%  Similarity=0.282  Sum_probs=121.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       158 qi~~~l~~lH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  234 (314)
T 2ivs_A          158 QISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSD  234 (314)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---HCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhh
Confidence            7899999999   8999999999999999999999999999998775544333333445778899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....++........   ........++.+.+++.+||+.||++|||+.++++.|+++.
T Consensus       235 i~slG~il~el~t~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          235 VWSFGVLLWEIVTLGGNPYP-GIPPERLFNLLKTGH---RMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             HHHHHHHHHHHHTTSCCSST-TCCGGGHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHhhcCC---cCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 655554 333333333332221   11222345678999999999999999999999999999987


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       311 ~  311 (314)
T 2ivs_A          311 V  311 (314)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=5.7e-35  Score=206.86  Aligned_cols=155  Identities=19%  Similarity=0.285  Sum_probs=114.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       155 qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  231 (313)
T 3brb_A          155 DIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSD  231 (313)
T ss_dssp             HHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhh
Confidence            7899999999   8999999999999999999999999999997765443333333345677899999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++......+.........   ........+..+.+++.+||+.+|++|||+.++++.|+++.+
T Consensus       232 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~  308 (313)
T 3brb_A          232 VWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGH---RLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLE  308 (313)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC---CCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCC---CCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            99999999999995444444444444443333322   112223456789999999999999999999999999999875


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       309 ~  309 (313)
T 3brb_A          309 S  309 (313)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2.5e-35  Score=206.76  Aligned_cols=157  Identities=21%  Similarity=0.331  Sum_probs=114.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++................++..|+|||.+.   +..++.
T Consensus       128 qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  204 (289)
T 3og7_A          128 QTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF  204 (289)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCCTTCCHHHHC----CCSCH
T ss_pred             HHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCc
Confidence            7899999999   8999999999999999999999999999997655433222223446899999999986   566888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccc-hhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS-SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      ++||||+|+++++++++..|+........+............. .....++..+.+++.+||+.+|++|||+.++++.|+
T Consensus       205 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~  284 (289)
T 3og7_A          205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIE  284 (289)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence            9999999999999999988876554444443333332221111 112345678999999999999999999999999999


Q ss_pred             HHhh
Q 043958          158 QAYR  161 (163)
Q Consensus       158 ~~~~  161 (163)
                      ++.+
T Consensus       285 ~l~~  288 (289)
T 3og7_A          285 ELAR  288 (289)
T ss_dssp             HTTC
T ss_pred             HHhh
Confidence            8864

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.2e-35  Score=214.70  Aligned_cols=154  Identities=18%  Similarity=0.218  Sum_probs=119.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC---CeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +++++||||||+|||++.++   .+||+|||+++...............+++.|+|||.+.+..++.
T Consensus       189 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  265 (367)
T 3l9p_A          189 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTS  265 (367)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCc
Confidence            7899999999   89999999999999998555   59999999997653332222222345788999999999889999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      ++||||+|++++++++...+++......++...+.....   ......++..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       266 ~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          266 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR---MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            999999999999999844444444444445444443321   11223456789999999999999999999999999998


Q ss_pred             Hhh
Q 043958          159 AYR  161 (163)
Q Consensus       159 ~~~  161 (163)
                      +.+
T Consensus       343 ~~~  345 (367)
T 3l9p_A          343 CTQ  345 (367)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            764

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.1e-34  Score=206.94  Aligned_cols=156  Identities=12%  Similarity=0.163  Sum_probs=120.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC-----eEECccccccccCCCCCcc-----cccCccccccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-----AKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYV   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~-----~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~   71 (163)
                      |++.||+|||   +.+++||||||+||+++.++.     ++|+|||++..........     ......||+.|+|||.+
T Consensus       113 qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  189 (330)
T 2izr_A          113 QLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTH  189 (330)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHH
Confidence            7899999999   899999999999999998887     9999999998764433221     12345789999999999


Q ss_pred             ccCCCCcccceeecchhhHHHhhhcccccccc--chhhccchhhhhhhcccchhh-HHHHHHHHHHHHhccccCcCCCCC
Q 043958           72 TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECN--TFDEIVDPVIREELCIQSSEK-DKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        72 ~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      .+..++.++|+||||+++++++++..||....  ...+.+..+............ ...+ .+.+++..||+.+|.+||+
T Consensus       190 ~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~  268 (330)
T 2izr_A          190 LGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPD  268 (330)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCC
T ss_pred             cCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCC
Confidence            99889999999999999999999988876432  222333333332221211111 1133 8999999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 043958          149 MIDVAKQLRQAYR  161 (163)
Q Consensus       149 ~~~i~~~L~~~~~  161 (163)
                      +.++.+.|+++.+
T Consensus       269 ~~~l~~~l~~~~~  281 (330)
T 2izr_A          269 YDYLRKLFTDLFD  281 (330)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998764

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.8e-35  Score=205.44  Aligned_cols=155  Identities=19%  Similarity=0.280  Sum_probs=120.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++........... ....++..|+|||.+.+..++.++|
T Consensus       114 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  189 (269)
T 4hcu_A          114 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS-TGTKFPVKWASPEVFSFSRYSSKSD  189 (269)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST-TSTTCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccccccc-cCcccccccCCHHHhcCCCCCchhh
Confidence            7899999999   89999999999999999999999999999976654322211 1234677899999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++......+.........   ........+..+.+++.+||+.+|++|||+.++++.|+++.+
T Consensus       190 i~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGF---RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCc---cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            99999999999994444444444444444333321   111222346789999999999999999999999999999988


Q ss_pred             cC
Q 043958          162 FG  163 (163)
Q Consensus       162 ~~  163 (163)
                      +|
T Consensus       267 ~g  268 (269)
T 4hcu_A          267 SG  268 (269)
T ss_dssp             C-
T ss_pred             cc
Confidence            75

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.2e-35  Score=210.56  Aligned_cols=154  Identities=17%  Similarity=0.235  Sum_probs=120.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++................+++.|+|||.+.+..++.++|
T Consensus       180 qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  256 (344)
T 1rjb_A          180 QVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD  256 (344)
T ss_dssp             HHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHh
Confidence            7899999999   8999999999999999999999999999997665443333333445778899999998889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|++++++++ +..|+... .....+..........  ......+..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       257 i~slG~il~el~t~g~~p~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          257 VWSYGILLWEIFSLGVNPYPGI-PVDANFYKLIQNGFKM--DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTTC-CCSHHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHcCCCCCcccC-CcHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            9999999999998 66665433 2222222222222211  122235678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       334 ~  334 (344)
T 1rjb_A          334 A  334 (344)
T ss_dssp             -
T ss_pred             H
Confidence            5

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.9e-35  Score=204.36  Aligned_cols=154  Identities=19%  Similarity=0.230  Sum_probs=123.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++.........  .......++..|+|||.+.+..++.+
T Consensus       132 qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  208 (298)
T 3pls_A          132 QVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTK  208 (298)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHH
T ss_pred             HHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChh
Confidence            7899999999   899999999999999999999999999999765443211  11223457889999999998889999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +|+||+|+++++++++..|++......+..........   .......+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       209 ~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~  285 (298)
T 3pls_A          209 SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRR---LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI  285 (298)
T ss_dssp             HHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCC---CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999999988887765555444443333321   122233567899999999999999999999999999998


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      ..
T Consensus       286 ~~  287 (298)
T 3pls_A          286 VS  287 (298)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=5.3e-35  Score=206.77  Aligned_cols=154  Identities=16%  Similarity=0.270  Sum_probs=121.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       153 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  229 (313)
T 1t46_A          153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  229 (313)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHH
Confidence            7899999999   8999999999999999999999999999998776554433333445778899999998889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+.. .................  ......+..+.+++.+||+.||.+|||+.++++.|+++.
T Consensus       230 i~slG~il~ellt~g~~p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          230 VWSYGIFLWELFSLGSSPYPG-MPVDSKFYKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTT-CCSSHHHHHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCc-ccchhHHHHHhccCCCC--CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            9999999999998 6555543 33222222222222111  122345678999999999999999999999999999887


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       307 ~  307 (313)
T 1t46_A          307 S  307 (313)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.5e-34  Score=203.04  Aligned_cols=157  Identities=13%  Similarity=0.202  Sum_probs=121.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcc-----cccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.||+|||   +++++||||||+||++   +.++.+||+|||++..........     ......++..|+|||.+.+
T Consensus       113 qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  189 (296)
T 3uzp_A          113 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  189 (296)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcC
Confidence            7899999999   8999999999999999   488899999999998765443321     1224468999999999998


Q ss_pred             CCCCcccceeecchhhHHHhhhccccccccc--hhhccchhhhhhhcccc-hhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECNT--FDEIVDPVIREELCIQS-SEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      ..++.++||||+|+++++++++..||.....  ..+.............. ......++.+.+++.+||+.||++|||+.
T Consensus       190 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~  269 (296)
T 3uzp_A          190 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYS  269 (296)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHH
T ss_pred             CCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHH
Confidence            8899999999999999999999888764321  12222222222211111 11123567899999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 043958          151 DVAKQLRQAYR  161 (163)
Q Consensus       151 ~i~~~L~~~~~  161 (163)
                      ++++.|+++..
T Consensus       270 ~l~~~l~~~~~  280 (296)
T 3uzp_A          270 YLRQLFRNLFH  280 (296)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999999865

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=5.6e-35  Score=208.17  Aligned_cols=154  Identities=18%  Similarity=0.229  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++
T Consensus       159 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  235 (325)
T 3kul_A          159 GVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSAS  235 (325)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHH
Confidence            7899999999   8999999999999999999999999999998765443221 11123456789999999888899999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      ||||+|++++++++ +..|+. .....++........   ..+....++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus       236 Di~slG~il~ell~~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l  311 (325)
T 3kul_A          236 DVWSFGVVMWEVLAYGERPYW-NMTNRDVISSVEEGY---RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL  311 (325)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTT-TSCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCcc-cCCHHHHHHHHHcCC---CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            99999999999998 666654 333334443333321   1222334567899999999999999999999999999998


Q ss_pred             hhc
Q 043958          160 YRF  162 (163)
Q Consensus       160 ~~~  162 (163)
                      .+.
T Consensus       312 ~~~  314 (325)
T 3kul_A          312 IRS  314 (325)
T ss_dssp             HHS
T ss_pred             HhC
Confidence            764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.7e-35  Score=218.16  Aligned_cols=152  Identities=21%  Similarity=0.327  Sum_probs=120.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++.......... ....++..|+|||.+.++.++.++|
T Consensus       292 qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  367 (454)
T 1qcf_A          292 QIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFTIKSD  367 (454)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTT-CSSSSCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceecc-CCCcccccccCHHHhccCCCCcHHH
Confidence            7899999999   89999999999999999999999999999987653321111 1234567899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+. .....++...+..+ .  ..+....++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       368 vwslG~~l~el~t~g~~P~~-~~~~~~~~~~i~~~-~--~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          368 VWSFGILLMEIVTYGRIPYP-GMSNPEVIRALERG-Y--RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             HHHHHHHHHHHHTTSCCSST-TCCHHHHHHHHHHT-C--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             HHhHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcC-C--CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            9999999999999 655554 43444444433332 1  12223356788999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       444 ~  444 (454)
T 1qcf_A          444 T  444 (454)
T ss_dssp             S
T ss_pred             h
Confidence            4

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.7e-34  Score=210.82  Aligned_cols=147  Identities=18%  Similarity=0.278  Sum_probs=112.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||.|||   +.+++||||||+|||++.   ++.+||+|||+++........   ....+|+.|+|||.+.+..++.
T Consensus       169 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~  242 (400)
T 1nxk_A          169 SIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL---TTPCYTPYYVAPEVLGPEKYDK  242 (400)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSS
T ss_pred             HHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCcc---ccCCCCCCccCHhhcCCCCCCC
Confidence            7899999999   899999999999999987   789999999999766543322   2346899999999998889999


Q ss_pred             ccceeecchhhHHHhhhccccccccchh---hccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFD---EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++|++++|..||.......   .....+..+.+..........+.++.+|+.+||+.||++|||+.++++
T Consensus       243 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          243 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999999886543221   122223333333333333456788999999999999999999999987

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.4e-35  Score=211.75  Aligned_cols=154  Identities=19%  Similarity=0.279  Sum_probs=112.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||+|||   +++++||||||+||+++.++.+||+|||+++.........  ......++..|+|||.+.+..++.+
T Consensus       200 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  276 (373)
T 3c1x_A          200 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK  276 (373)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcH
Confidence            7899999999   8999999999999999999999999999997664332211  1122346778999999998899999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||||+|+++|+++++..+++......+.......+...   .....++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       277 ~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~---~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i  353 (373)
T 3c1x_A          277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRL---LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  353 (373)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999999766666544443333333332211   11224567899999999999999999999999999998


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      ..
T Consensus       354 ~~  355 (373)
T 3c1x_A          354 FS  355 (373)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=8.3e-34  Score=202.49  Aligned_cols=158  Identities=17%  Similarity=0.225  Sum_probs=115.0

Q ss_pred             hHHHHHHHHhcCCCC--------CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc--ccCccccccccCcccc
Q 043958            2 EIANALAYLHVGFPR--------PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK--DAIPIGIMGFVATEYV   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~--------~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~PE~~   71 (163)
                      |++.||+|||   +.        +++||||||+||+++.++.+||+|||++...........  .....||..|+|||.+
T Consensus       142 ~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  218 (337)
T 3mdy_A          142 SSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVL  218 (337)
T ss_dssp             HHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHH
T ss_pred             HHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhc
Confidence            7899999999   77        999999999999999999999999999976654332211  1244689999999999


Q ss_pred             ccCCCCcc------cceeecchhhHHHhhhc----------cccccccchh----hccchhhhhhhccc---chhhHHHH
Q 043958           72 TTGDYNEK------CDVFSFAGDRHWLLNRV----------KKHIECNTFD----EIVDPVIREELCIQ---SSEKDKQV  128 (163)
Q Consensus        72 ~~~~~~~~------~Dv~s~g~~~~~l~~~~----------~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~  128 (163)
                      .+.....+      +||||+|+++|+++++.          .|+.......    ..............   ......++
T Consensus       219 ~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (337)
T 3mdy_A          219 DESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECL  298 (337)
T ss_dssp             TTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHH
T ss_pred             ccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHH
Confidence            87665554      99999999999999993          3333211111    11111111111111   11234678


Q ss_pred             HHHHHHHHhccccCcCCCCCHHHHHHHHHHHhhc
Q 043958          129 QAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRF  162 (163)
Q Consensus       129 ~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~~  162 (163)
                      ..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       299 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          299 RQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence            8999999999999999999999999999998764

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=3.8e-35  Score=204.98  Aligned_cols=152  Identities=20%  Similarity=0.269  Sum_probs=109.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++........... ....+++.|+|||.+.+..++.++|
T Consensus       124 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  199 (281)
T 1mp8_A          124 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASD  199 (281)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCccccccc-ccCCCcccccChhhcccCCCCCccC
Confidence            7899999999   89999999999999999999999999999977654332221 1234667899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+....+.....   .+.....++.+.+++.+||+.||++|||+.++++.|+++.
T Consensus       200 i~slG~~l~ell~~g~~pf~-~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          200 VWMFGVCMWEILMHGVKPFQ-GVKNNDVIGRIENGER---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             HHHHHHHHHHHHTTSCCTTT-TCCGGGHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhcCCCCCC-cCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999997 555543 3333333333322221   1122345678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       276 ~  276 (281)
T 1mp8_A          276 E  276 (281)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=4.4e-35  Score=209.00  Aligned_cols=154  Identities=16%  Similarity=0.260  Sum_probs=119.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       172 qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  248 (333)
T 2i1m_A          172 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD  248 (333)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---cCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHH
Confidence            7899999999   8999999999999999999999999999997665443332233445778899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|++++++++ +..|+.. .................  ......+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       249 i~slG~il~el~t~g~~p~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          249 VWSYGILLWEIFSLGLNPYPG-ILVNSKFYKLVKDGYQM--AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHHHHHHHHHTTTSCCSSTT-CCSSHHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCcc-cchhHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            9999999999998 5555543 22222222222222211  112234578999999999999999999999999999875


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       326 ~  326 (333)
T 2i1m_A          326 Q  326 (333)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3e-34  Score=211.87  Aligned_cols=147  Identities=19%  Similarity=0.213  Sum_probs=121.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC---CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +++++||||||+||+++   .++.+||+|||++..........  ....||+.|+|||.+.+..++.
T Consensus       118 qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~  192 (444)
T 3soa_A          118 QILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAW--FGFAGTPGYLSPEVLRKDPYGK  192 (444)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBC--CCSCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCcee--ecccCCcccCCHHHhcCCCCCC
Confidence            7899999999   89999999999999998   56889999999997765443222  1346899999999999888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|++++++++|..||.. ....++...+..+......+.....++.+.+++.+||+.||++|||+.++++
T Consensus       193 ~~DIwSlGvilyell~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          193 PVDLWACGVILYILLVGYPPFWD-EDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccccHHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999888754 3444555555555544444555566789999999999999999999999987

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.1e-34  Score=202.71  Aligned_cols=158  Identities=18%  Similarity=0.264  Sum_probs=116.0

Q ss_pred             hHHHHHHHHhcCC-----CCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~-----~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~   74 (163)
                      |++.||+|||...     +++++||||||+||+++.++.+||+|||++..........  ......||+.|+|||.+.+.
T Consensus       113 ~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  192 (301)
T 3q4u_A          113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET  192 (301)
T ss_dssp             HHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTC
T ss_pred             HHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCc
Confidence            7899999999321     4689999999999999999999999999997655433321  11234689999999999876


Q ss_pred             ------CCCcccceeecchhhHHHhhh----------ccccccccchh----hccchhhhhhhcc---cchhhHHHHHHH
Q 043958           75 ------DYNEKCDVFSFAGDRHWLLNR----------VKKHIECNTFD----EIVDPVIREELCI---QSSEKDKQVQAF  131 (163)
Q Consensus        75 ------~~~~~~Dv~s~g~~~~~l~~~----------~~~~~~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~~~~  131 (163)
                            .++.++||||+|+++|+++++          ..|+.......    .............   ........+..+
T Consensus       193 ~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  272 (301)
T 3q4u_A          193 IQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSL  272 (301)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHH
T ss_pred             CCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHH
Confidence                  345789999999999999998          55554322111    1111111111111   111234577899


Q ss_pred             HHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958          132 VELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      .+++.+||+.||++|||+.++++.|+++
T Consensus       273 ~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          273 AKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            9999999999999999999999999986

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.5e-34  Score=213.90  Aligned_cols=148  Identities=21%  Similarity=0.298  Sum_probs=117.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+|||++.++.+||+|||+++.......     ...++..|+|||.+.+..++.++|
T Consensus       297 qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~sD  368 (450)
T 1k9a_A          297 DVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  368 (450)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccccc-----CCCCCcceeCHHHhcCCCCCcHHH
Confidence            7899999999   89999999999999999999999999999975543221     124677899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+. .....++...+..+ .  ....+..+++.+.+++.+||+.||++|||+.++++.|+++.
T Consensus       369 vwslG~~l~el~t~g~~P~~-~~~~~~~~~~i~~~-~--~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          369 VWSFGILLWEIYSFGRVPYP-RIPLKDVVPRVEKG-Y--KMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             HHHHHHHHHHHHTTTCCSST-TSCTTTHHHHHHTT-C--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcC-C--CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999998 666554 33444444433322 1  12223456788999999999999999999999999999986


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       445 ~  445 (450)
T 1k9a_A          445 T  445 (450)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=8.3e-35  Score=206.02  Aligned_cols=154  Identities=18%  Similarity=0.282  Sum_probs=120.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       156 qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  232 (316)
T 2xir_A          156 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  232 (316)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhH
Confidence            7899999999   8999999999999999999999999999997765544333333446788999999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+................ ...  ......++.+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       233 i~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          233 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG-TRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT-CCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccC-ccC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999998 666654333222222222221 111  112235678999999999999999999999999999987


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       310 ~  310 (316)
T 2xir_A          310 Q  310 (316)
T ss_dssp             H
T ss_pred             h
Confidence            5

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1.5e-34  Score=206.46  Aligned_cols=153  Identities=17%  Similarity=0.242  Sum_probs=121.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.+||+|||++................++..|+|||.+.+..++.++|
T Consensus       165 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  241 (334)
T 2pvf_A          165 QLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSD  241 (334)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHH
Confidence            7899999999   8999999999999999999999999999998776544333333345678899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|++++++++ +..|+ ......++.........   ......++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       242 i~slG~il~ellt~g~~p~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          242 VWSFGVLMWEIFTLGGSPY-PGIPVEELFKLLKEGHR---MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             HHHHHHHHHHHHTTSCCSS-TTCCHHHHHHHHHHTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCc-CcCCHHHHHHHHhcCCC---CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 55554 34444444443333221   1122345678999999999999999999999999999986


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       318 ~  318 (334)
T 2pvf_A          318 T  318 (334)
T ss_dssp             H
T ss_pred             h
Confidence            4

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=2.4e-34  Score=207.45  Aligned_cols=146  Identities=21%  Similarity=0.261  Sum_probs=119.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC----CeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      ||+.||.|||   +.+++||||||+||+++.++    .++|+|||++..........   ...||+.|+|||.+.+..++
T Consensus       123 qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~  196 (361)
T 2yab_A          123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLG  196 (361)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCC---CCCSCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccc---cCCCCccEECchHHcCCCCC
Confidence            7899999999   89999999999999998777    79999999998765543222   34689999999999988999


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++|+||+|+++|++++|..||... ...+.+..+....+.+........+..+++|+.+||..||++|||+.++++
T Consensus       197 ~~~DiwslGvil~~ll~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          197 LEADMWSIGVITYILLSGASPFLGD-TKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             THHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999998887643 344445544444443333444456788999999999999999999999885

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.3e-34  Score=203.67  Aligned_cols=154  Identities=20%  Similarity=0.290  Sum_probs=121.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++++|||++.........  .......++..|+|||.+.+..++.+
T Consensus       136 ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  212 (298)
T 3f66_A          136 QVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTK  212 (298)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChH
Confidence            7899999999   899999999999999999999999999999766543221  11123356778999999998899999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +|+||+|+++++++++..+++......+............   .....+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       213 ~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~  289 (298)
T 3f66_A          213 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL---QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  289 (298)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            9999999999999997777765554444443333332111   1223456899999999999999999999999999998


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      .+
T Consensus       290 ~~  291 (298)
T 3f66_A          290 FS  291 (298)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=3.5e-34  Score=203.81  Aligned_cols=151  Identities=29%  Similarity=0.467  Sum_probs=118.0

Q ss_pred             hHHHHHHHHhcCCCC---CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPR---PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~---~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.   +++||||||+||+++.++.++|+|||++............ ...|++.|+|||.+.+..++.
T Consensus       139 ~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~  214 (326)
T 3uim_A          139 GSARGLAYLH---DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT-AVRGTIGHIAPEYLSTGKSSE  214 (326)
T ss_dssp             HHHHHHHHHH---HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEEC-CCCSCGGGCCHHHHHHSEECH
T ss_pred             HHHHHHHHHH---hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccc-cccCCcCccCHHHhccCCCCc
Confidence            7899999999   67   9999999999999999999999999999876544333222 345899999999998888999


Q ss_pred             ccceeecchhhHHHhhhccccccccch-------hh---------ccchhhhhhhcccchhhHHHHHHHHHHHHhccccC
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTF-------DE---------IVDPVIREELCIQSSEKDKQVQAFVELAVKCVSES  142 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~-------~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~  142 (163)
                      ++||||+|+++++++++..|+......       .+         ........  ..........+..+.+++.+||+.|
T Consensus       215 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~d  292 (326)
T 3uim_A          215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDV--DLQGNYKDEEVEQLIQVALLCTQSS  292 (326)
T ss_dssp             HHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCT--TCTTSCCHHHHHHHHHHHHHHTCSC
T ss_pred             cccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcCh--hhccccCHHHHHHHHHHHHHHhCcC
Confidence            999999999999999998887421100       00         00000011  1112334567789999999999999


Q ss_pred             cCCCCCHHHHHHHHHH
Q 043958          143 AEDRPTMIDVAKQLRQ  158 (163)
Q Consensus       143 p~~Rpt~~~i~~~L~~  158 (163)
                      |++|||+.++++.|+.
T Consensus       293 P~~Rps~~ell~~L~~  308 (326)
T 3uim_A          293 PMERPKMSEVVRMLEG  308 (326)
T ss_dssp             GGGSCCHHHHHHHHHT
T ss_pred             CccCCCHHHHHHHhcC
Confidence            9999999999999985

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=204.91  Aligned_cols=140  Identities=17%  Similarity=0.172  Sum_probs=111.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++..........   ...||+.|+|||.+.+ .++.++|
T Consensus       165 qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~~~D  237 (311)
T 3p1a_A          165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGE---VQEGDPRYMAPELLQG-SYGTAAD  237 (311)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHH
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCc---ccCCCccccCHhHhcC-CCCchhh
Confidence            7899999999   8999999999999999999999999999987765433222   3358999999998875 7899999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+|+++++++++..+++.......+......      .......+..+.+++.+||+.||++|||+.++++
T Consensus       238 iwslG~il~el~~g~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          238 VFSLGLTILEVACNMELPHGGEGWQQLRQGYLP------PEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCC------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCCCccHHHHHhccCCC------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            999999999999998877655444433332211      1223345678999999999999999999999986

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=4.7e-35  Score=209.44  Aligned_cols=153  Identities=18%  Similarity=0.287  Sum_probs=120.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       182 qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~D  258 (343)
T 1luf_A          182 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD  258 (343)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccc
Confidence            7899999999   8999999999999999999999999999997664433222222345788999999999888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....++...+......   .....++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       259 i~slG~il~el~t~g~~p~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          259 VWAYGVVLWEIFSYGLQPYY-GMAHEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             HHHHHHHHHHHHTTTCCTTT-TSCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHHhcCCCcCC-CCChHHHHHHHhCCCcC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            9999999999998 666654 33444444433333211   112345678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       335 ~  335 (343)
T 1luf_A          335 E  335 (343)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-34  Score=206.26  Aligned_cols=146  Identities=15%  Similarity=0.257  Sum_probs=120.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC--CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||.|||   +.+++||||||+||+++.  ++.++++|||++..........   ...+++.|+|||.+.+..++.+
T Consensus       110 qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~  183 (321)
T 1tki_A          110 QVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR---LLFTAPEYYAPEVHQHDVVSTA  183 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE---EEESCGGGSCHHHHTTCEECHH
T ss_pred             HHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccc---cccCChhhcCcHHhcCCCCCch
Confidence            7899999999   899999999999999987  7899999999998775443222   3368899999999988888999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+|+++++++++..||... ...+....+...............+.++.+++.+||..||++|||+.++++
T Consensus       184 ~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          184 TDMWSLGTLVYVLLSGINPFLAE-TNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCcCC-CHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            99999999999999998887643 344455555555444443444456788999999999999999999999987

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=7.2e-35  Score=204.95  Aligned_cols=156  Identities=15%  Similarity=0.241  Sum_probs=114.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++........... ....|++.|+|||.+.+..++.++|
T Consensus       119 qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~D  194 (294)
T 4eqm_A          119 QILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQT-NHVLGTVQYFSPEQAKGEATDECTD  194 (294)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccccc-CccccCccccCHhHhcCCCCCchHh
Confidence            7899999999   89999999999999999999999999999976654332222 2346899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-CHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-TMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-t~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..||............................+..+.+++.+||+.||++|| ++.++.+.|+.+.
T Consensus       195 i~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          195 IYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             HHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            999999999999998887654433322221111110011111233567899999999999999998 8999999998765


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       275 ~  275 (294)
T 4eqm_A          275 H  275 (294)
T ss_dssp             S
T ss_pred             h
Confidence            3

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=7.9e-35  Score=215.54  Aligned_cols=152  Identities=24%  Similarity=0.288  Sum_probs=115.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+|||++.++.+||+|||+++.......... ....++..|+|||.+.++.++.++|
T Consensus       288 qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sD  363 (452)
T 1fmk_A          288 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR-QGAKFPIKWTAPEAALYGRFTIKSD  363 (452)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc-cCCcccccccCHhHHhcCCCCcccc
Confidence            7899999999   89999999999999999999999999999977654322211 1234667899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+. .....++...+..+.   ..+....+++.+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       364 vwslG~~l~el~t~g~~P~~-~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          364 VWSFGILLTELTTKGRVPYP-GMVNREVLDQVERGY---RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             HHHHHHHHHHHHTTTCCSST-TCCHHHHHHHHHTTC---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HHhHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            9999999999999 555543 444444444333321   12223356778999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       440 ~  440 (452)
T 1fmk_A          440 T  440 (452)
T ss_dssp             S
T ss_pred             c
Confidence            4

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.9e-33  Score=198.52  Aligned_cols=156  Identities=22%  Similarity=0.330  Sum_probs=119.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.+ .++.++|
T Consensus       141 ~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~D  216 (307)
T 2nru_A          141 GAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSD  216 (307)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHH
T ss_pred             HHHHHHHHHh---cCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccch
Confidence            7899999999   89999999999999999999999999999977654433333334568999999998764 5888999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhh---------hh--cccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE---------EL--CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      +||+|+++++++++..|+....... ........         ..  ..........+..+.+++.+||+.+|++|||+.
T Consensus       217 v~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~  295 (307)
T 2nru_A          217 IYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK  295 (307)
T ss_dssp             HHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             hHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence            9999999999999988775433221 11111110         00  001122345678899999999999999999999


Q ss_pred             HHHHHHHHHhhc
Q 043958          151 DVAKQLRQAYRF  162 (163)
Q Consensus       151 ~i~~~L~~~~~~  162 (163)
                      ++++.|+++.++
T Consensus       296 ~l~~~L~~l~~s  307 (307)
T 2nru_A          296 KVQQLLQEMTAS  307 (307)
T ss_dssp             HHHHHHHHHC--
T ss_pred             HHHHHHHHHhcC
Confidence            999999998764

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.1e-34  Score=206.07  Aligned_cols=154  Identities=18%  Similarity=0.310  Sum_probs=120.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.++|+|||++................++..|+|||.+.+..++.++|
T Consensus       146 qi~~~l~~lH---~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  222 (322)
T 1p4o_A          146 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  222 (322)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997665443332223345678899999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++......+...........   ......+..+.+++.+||+.+|++|||+.++++.|+++..
T Consensus       223 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          223 VWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcC---CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            9999999999999544444444444444433333211   1123456789999999999999999999999999988754

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=3.1e-34  Score=205.76  Aligned_cols=155  Identities=15%  Similarity=0.106  Sum_probs=116.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC--CeEECccccccccCCCCCc-----ccccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~--~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~   74 (163)
                      |++.||+|||   +.+++||||||+||+++.++  .++|+|||+++........     .......++..|+|||.+.+.
T Consensus       159 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  235 (345)
T 2v62_A          159 RMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV  235 (345)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC
T ss_pred             HHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCC
Confidence            7899999999   89999999999999998887  9999999999776433211     111234689999999999988


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhh-------HHHHHHHHHHHHhccccCcCCCC
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEK-------DKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      .++.++||||+|+++++++++..||................ .....+..       ...+..+.+++.+||+.+|++||
T Consensus       236 ~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  314 (345)
T 2v62_A          236 ALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTN-LLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKP  314 (345)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHH-HHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHh-hcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCC
Confidence            89999999999999999999988875422211111111111 00111111       03556899999999999999999


Q ss_pred             CHHHHHHHHHHHh
Q 043958          148 TMIDVAKQLRQAY  160 (163)
Q Consensus       148 t~~~i~~~L~~~~  160 (163)
                      |+.++++.|+++.
T Consensus       315 s~~~l~~~L~~~~  327 (345)
T 2v62_A          315 NYQALKKILNPHG  327 (345)
T ss_dssp             CHHHHHHHHCTTC
T ss_pred             CHHHHHHHHhccC
Confidence            9999999998653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=2.1e-34  Score=199.85  Aligned_cols=152  Identities=17%  Similarity=0.198  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++............ ...++..|+|||.+.+..++.++|
T Consensus       112 qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~D  187 (268)
T 3sxs_A          112 DVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV-GTKFPVKWSAPEVFHYFKYSSKSD  187 (268)
T ss_dssp             HHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECC-SCCCCGGGCCHHHHHHSEEETTHH
T ss_pred             HHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhccc-CCCcCcccCCHHHHhccCCchhhh
Confidence            7899999999   899999999999999999999999999999776554333222 334667899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+..........   .......+..+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       188 i~slG~il~~l~~~g~~p~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (268)
T 3sxs_A          188 VWAFGILMWEVFSLGKMPYD-LYTNSEVVLKVSQGHR---LYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR  263 (268)
T ss_dssp             HHHHHHHHHHHHTTTCCTTT-TSCHHHHHHHHHTTCC---CCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGC
T ss_pred             hHHHHHHHHHHHcCCCCCcc-ccChHHHHHHHHcCCC---CCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            9999999999998 665554 3333333333322221   1112234568999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       264 ~  264 (268)
T 3sxs_A          264 E  264 (268)
T ss_dssp             C
T ss_pred             h
Confidence            4

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.4e-34  Score=200.56  Aligned_cols=148  Identities=14%  Similarity=0.147  Sum_probs=115.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++..........  ....+|..|+|||.+.+.. ++.++
T Consensus       109 ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  183 (292)
T 3o0g_A          109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY--SAEVVTLWYRPPDVLFGAKLYSTSI  183 (292)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCC--CSCCSCGGGCCHHHHTTCSCCCTHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccc--cCCccccCCcChHHHcCCCCcCchH
Confidence            7899999999   8999999999999999999999999999997765433222  2346789999999998765 79999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcc-------------------------cchhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI-------------------------QSSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..|++......+.+..+......+                         ........+..+.+++
T Consensus       184 DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  263 (292)
T 3o0g_A          184 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL  263 (292)
T ss_dssp             HHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHH
Confidence            999999999999999998776655444333322211000                         0011123557889999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||++|||+.++++
T Consensus       264 ~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          264 QNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHSCSSGGGSCCHHHHHT
T ss_pred             HHHhccChhhCCCHHHHhc
Confidence            9999999999999999986

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.2e-34  Score=203.24  Aligned_cols=146  Identities=21%  Similarity=0.230  Sum_probs=117.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC----CeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      |++.||.|||   +.+++||||||+||+++.++    .++|+|||++..........   ...+++.|+|||.+.+..++
T Consensus       122 qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~  195 (326)
T 2y0a_A          122 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLG  195 (326)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCC---CCCSCTTTCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccc---cccCCcCcCCceeecCCCCC
Confidence            7899999999   89999999999999998887    79999999998765433222   34689999999999888899


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++|+||+|+++++++++..|+... ...+....+...............+..+.+++.+||..||++|||+.++++
T Consensus       196 ~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          196 LEADMWSIGVITYILLSGASPFLGD-TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             THHHHHHHHHHHHHHHHSCCSSCCS-SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999998887643 333333333333332333333456678999999999999999999999986

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=1.1e-34  Score=216.85  Aligned_cols=152  Identities=16%  Similarity=0.294  Sum_probs=118.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++.......... ....++..|+|||.+.+..++.++|
T Consensus       326 qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~sD  401 (495)
T 1opk_A          326 QISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSD  401 (495)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECC-TTCCCCGGGCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeec-CCCcCCcceeCHhHHhcCCCCcHHh
Confidence            7899999999   89999999999999999999999999999987654322211 1234567899999999888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+ ......++...... ..  .......++..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       402 vwSlG~~l~el~t~g~~p~-~~~~~~~~~~~~~~-~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          402 VWAFGVLLWEIATYGMSPY-PGIDLSQVYELLEK-DY--RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHHHHHHTTSCCSS-TTCCGGGHHHHHHT-TC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             HHhHHHHHHHHHhCCCCCC-CCCCHHHHHHHHHc-CC--CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            9999999999999 55554 34333333333222 21  22223346688999999999999999999999999999875


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       478 ~  478 (495)
T 1opk_A          478 Q  478 (495)
T ss_dssp             S
T ss_pred             h
Confidence            4

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=4.1e-34  Score=203.98  Aligned_cols=142  Identities=21%  Similarity=0.280  Sum_probs=116.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCC-ccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~-~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++.........   ....|++.|+|||.+.+..+. .++
T Consensus       122 qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~  195 (328)
T 3fe3_A          122 QIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKL---DAFCGAPPYAAPELFQGKKYDGPEV  195 (328)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGG---GTTSSSGGGCCHHHHHTCCCCSHHH
T ss_pred             HHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCcc---ccccCCcceeCcccccCCCcCCchh
Confidence            7899999999   899999999999999999999999999999776544332   234689999999999888765 789


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||+|++++++++|..||. .....++...+..+....+.    ..++.+.+++.+||..||.+|||++++++
T Consensus       196 DiwslG~il~ell~g~~pf~-~~~~~~~~~~i~~~~~~~p~----~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          196 DVWSLGVILYTLVSGSLPFD-GQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHCCCCCCT----TSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             hhhhhHHHHHHHHhCCCCCC-CCCHHHHHHHHHhCCCCCCC----CCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            99999999999999988875 34445555555555433322    34578999999999999999999999976

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.6e-34  Score=206.63  Aligned_cols=157  Identities=13%  Similarity=0.121  Sum_probs=119.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC--CeEECccccccccCCCCCc-----ccccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~--~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~~   74 (163)
                      |++.||+|||   +++++||||||+||+++.++  .++|+|||+++........     .......+++.|+|||.+.+.
T Consensus       167 qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  243 (352)
T 2jii_A          167 RLLDALEFLH---ENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC  243 (352)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC
T ss_pred             HHHHHHHHHH---hCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccC
Confidence            7899999999   89999999999999999998  8999999999766533211     111234688999999999988


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhh-hhccc-----chhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-ELCIQ-----SSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      .++.++|+||+|+++++++++..|+.........+...... .....     .......+..+.+++.+||+.||++|||
T Consensus       244 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  323 (352)
T 2jii_A          244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP  323 (352)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC
Confidence            89999999999999999999988876543222211111110 00000     0001123578999999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 043958          149 MIDVAKQLRQAYR  161 (163)
Q Consensus       149 ~~~i~~~L~~~~~  161 (163)
                      +.++++.|+++.+
T Consensus       324 ~~~l~~~L~~~~~  336 (352)
T 2jii_A          324 YAMLRNNLEALLQ  336 (352)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=4.2e-34  Score=206.38  Aligned_cols=146  Identities=21%  Similarity=0.242  Sum_probs=118.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC---CCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||.|||   +.+++||||||+||+++.+   +.+||+|||++..........   ...||+.|+|||.+.+..++.
T Consensus       136 qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~  209 (362)
T 2bdw_A          136 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSK  209 (362)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCC---CSCSCTTTCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccc---cCCCCccccCHHHHccCCCCc
Confidence            7899999999   8999999999999999765   459999999997765433221   346899999999999888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++|+++++..||... ...++...+..+............+..+.+++.+||+.||++|||+.++++
T Consensus       210 ~~DiwslG~il~~ll~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          210 PVDIWACGVILYILLVGYPPFWDE-DQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999998887643 334455555555444444445566788999999999999999999999876

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=2.7e-34  Score=206.43  Aligned_cols=147  Identities=21%  Similarity=0.251  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||+++.   ++.+||+|||++.........   ....|++.|+|||.+.+..++.
T Consensus       156 qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~  229 (349)
T 2w4o_A          156 QILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLM---KTVCGTPGYCAPEILRGCAYGP  229 (349)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------------CGGGSCHHHHTTCCCCT
T ss_pred             HHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccccc---ccccCCCCccCHHHhcCCCCCc
Confidence            7899999999   899999999999999975   889999999998765433221   1346899999999999888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++|+++++..|+............+.........+.....+..+.+++.+||+.||++|||+.++++
T Consensus       230 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          230 EVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999999887555444344444443333333333456778999999999999999999999886

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=9.9e-35  Score=210.16  Aligned_cols=145  Identities=7%  Similarity=-0.015  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc--CCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--GDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--~~~~~~   79 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++.......     ...+++.|+|||.+.+  ..++.+
T Consensus       202 qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~  273 (371)
T 3q60_A          202 QLIRLAANLQ---SKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGP-----ASSVPVTYAPREFLNASTATFTHA  273 (371)
T ss_dssp             HHHHHHHHHH---HTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCEEE-----GGGSCGGGCCHHHHTCSEEECCHH
T ss_pred             HHHHHHHHHH---HCCCccCcCCHHHEEECCCCCEEEEecceeeecCCCcc-----CccCCcCCcChhhccCCCCCcCcc
Confidence            7899999999   89999999999999999999999999999976643221     2346689999999987  578999


Q ss_pred             cceeecchhhHHHhhhccccccccchh-hccch---hhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFD-EIVDP---VIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||||+|+++++++++..||....... .....   ..........+.....+..+.+++.+||+.||++|||+.++++
T Consensus       274 ~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999988876542211 11111   1111111222222345678999999999999999999999975

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.4e-34  Score=200.56  Aligned_cols=155  Identities=19%  Similarity=0.273  Sum_probs=119.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++++|||++.......... .....++..|+|||.+.+..++.++|
T Consensus       112 ~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~D  187 (267)
T 3t9t_A          112 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS-STGTKFPVKWASPEVFSFSRYSSKSD  187 (267)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS-TTSTTCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccccc-cccccccccccChhhhcCCCccchhc
Confidence            7899999999   8999999999999999999999999999997664322111 11234677899999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++......+....+.....   .......+..+.+++.+||+.+|++|||+.++++.|+++.+
T Consensus       188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR---LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCc---CCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999944444444444444433332211   11122346789999999999999999999999999999987


Q ss_pred             cC
Q 043958          162 FG  163 (163)
Q Consensus       162 ~~  163 (163)
                      +|
T Consensus       265 ~~  266 (267)
T 3t9t_A          265 SG  266 (267)
T ss_dssp             C-
T ss_pred             cc
Confidence            65

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=4e-34  Score=208.30  Aligned_cols=147  Identities=16%  Similarity=0.270  Sum_probs=107.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc--------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--------   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------   73 (163)
                      ||+.||.|||   +.+|+||||||+|||++ ++.+||+|||++................||+.|+|||.+.+        
T Consensus       163 qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  238 (390)
T 2zmd_A          163 NMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENG  238 (390)
T ss_dssp             HHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC-------
T ss_pred             HHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhcccccccc
Confidence            7899999999   89999999999999995 57899999999987654433322334569999999999865        


Q ss_pred             ---CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 ---GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ---~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                         ..++.++||||+|+++|+++++..||.........+............+  ...+..+.+++.+||+.||++|||+.
T Consensus       239 ~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~  316 (390)
T 2zmd_A          239 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIP  316 (390)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             ccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC--ccchHHHHHHHHHHcccChhhCCCHH
Confidence               3588899999999999999999988764332222222222222111111  12246799999999999999999999


Q ss_pred             HHHH
Q 043958          151 DVAK  154 (163)
Q Consensus       151 ~i~~  154 (163)
                      ++++
T Consensus       317 ell~  320 (390)
T 2zmd_A          317 ELLA  320 (390)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9986

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2.5e-34  Score=200.77  Aligned_cols=152  Identities=20%  Similarity=0.305  Sum_probs=116.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++........... ....++..|+|||.+.+..++.++|
T Consensus       121 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  196 (281)
T 3cc6_A          121 QICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKA-SVTRLPIKWMSPESINFRRFTTASD  196 (281)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccccccccc-ccCCCCcceeCchhhccCCCCchhc
Confidence            7899999999   89999999999999999999999999999976654332221 1335677899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+... ...+.........   ..+.....++.+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       197 i~slG~il~~llt~g~~p~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          197 VWMFAVCMWEILSFGKQPFFWL-ENKDVIGVLEKGD---RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTS-CGGGHHHHHHHTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCCCCCcccC-ChHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence            9999999999998 77766432 2222332222221   11122235678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       273 ~  273 (281)
T 3cc6_A          273 Q  273 (281)
T ss_dssp             H
T ss_pred             H
Confidence            5

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.7e-34  Score=209.00  Aligned_cols=149  Identities=18%  Similarity=0.208  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC-------------------cccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET-------------------HIKDAIPIGI   62 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------~~~~~~~~~~   62 (163)
                      |++.||+|||   +.+++||||||+|||++.++.+||+|||+++.......                   ........+|
T Consensus       117 qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  193 (388)
T 3oz6_A          117 QLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT  193 (388)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCG
T ss_pred             HHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCccc
Confidence            7899999999   89999999999999999999999999999976543111                   1111234689


Q ss_pred             ccccCcccccc-CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccch-------------------
Q 043958           63 MGFVATEYVTT-GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS-------------------  122 (163)
Q Consensus        63 ~~~~~PE~~~~-~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------  122 (163)
                      +.|+|||.+.+ ..++.++||||+||+++++++|..||........ +..+...- ..+..                   
T Consensus       194 ~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~-~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~  271 (388)
T 3oz6_A          194 RWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ-LERIIGVI-DFPSNEDVESIQSPFAKTMIESLK  271 (388)
T ss_dssp             GGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHH
T ss_pred             CCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCc
Confidence            99999999876 5689999999999999999999888765443222 21111100 00000                   


Q ss_pred             -------------------------hhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958          123 -------------------------EKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus       123 -------------------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                                               .....++.+.+|+.+||..||++|||+.++++.
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          272 EKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             HHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             ccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence                                     000235689999999999999999999998863

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=7.8e-34  Score=204.18  Aligned_cols=146  Identities=18%  Similarity=0.253  Sum_probs=117.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC---eEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +++++||||||+||+++.++.   +|++|||++..........  ....||+.|+|||.+.+..++.
T Consensus       138 qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~  212 (351)
T 3c0i_A          138 QILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVA--GGRVGTPHFMAPEVVKREPYGK  212 (351)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBC--CCCCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeee--cCCcCCcCccCHHHHcCCCCCc
Confidence            7899999999   899999999999999976654   9999999998775543221  2346899999999999888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++++++++..||...  ..++...+...............+..+.+++.+||+.||++|||+.++++
T Consensus       213 ~~DiwslG~il~~ll~g~~pf~~~--~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          213 PVDVWGCGVILFILLSGCLPFYGT--KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCSS--HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hHhhHHHHHHHHHHHHCCCCCCCc--HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999998887643  23344444444333333333456788999999999999999999999986

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.5e-34  Score=208.31  Aligned_cols=153  Identities=16%  Similarity=0.230  Sum_probs=108.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||+++.......... .....++..|+|||.+.+..++.++
T Consensus       155 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  231 (373)
T 2qol_A          155 GIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSAS  231 (373)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchh
Confidence            7899999999   89999999999999999999999999999977654332211 1122346689999999988999999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      ||||||+++|++++ +..|+. .....++...+....   ..+....++..+.+++.+||+.+|++||++.++++.|+++
T Consensus       232 Dv~SlG~il~ellt~g~~P~~-~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~  307 (373)
T 2qol_A          232 DVWSYGIVLWEVMSYGERPYW-EMSNQDVIKAVDEGY---RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL  307 (373)
T ss_dssp             HHHHHHHHHHHHHTTC-CTTT-TCCHHHHHHHHHTTE---ECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCC---CCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence            99999999999998 666654 333333333332221   1122234567899999999999999999999999999988


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      .+
T Consensus       308 ~~  309 (373)
T 2qol_A          308 IR  309 (373)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.4e-34  Score=200.19  Aligned_cols=152  Identities=15%  Similarity=0.224  Sum_probs=118.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++........... ....++..|+|||.+.+..++.++|
T Consensus       128 qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  203 (283)
T 3gen_A          128 DVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSD  203 (283)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST-TSTTSCGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccccccc-cCCccCcccCCHHHhccCCCCchhh
Confidence            7899999999   89999999999999999999999999999976654322111 1234667899999999888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+.........   ........++.+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       204 v~slG~~l~~l~t~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          204 IWAFGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGL---RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             HHHHHHHHHHHHTTTCCTTT-TSCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCcc-ccChhHHHHHHhccc---CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            9999999999998 666654 333333333332221   11112234578999999999999999999999999999987


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       280 ~  280 (283)
T 3gen_A          280 D  280 (283)
T ss_dssp             H
T ss_pred             h
Confidence            5

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.8e-34  Score=201.34  Aligned_cols=146  Identities=16%  Similarity=0.147  Sum_probs=112.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++..........   ...+|+.|+|||.+.+..++.++|
T Consensus       128 qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~D  201 (308)
T 3g33_A          128 QFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT---PVVVTLWYRAPEVLLQSTYATPVD  201 (308)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCSG---GGGCCCSSCCHHHHHTSCCCSTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCcccC---CccccccccCchHHcCCCCCchHH
Confidence            7899999999   8999999999999999999999999999997665433222   346899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcc-----------------------cchhhHHHHHHHHHHHHhc
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI-----------------------QSSEKDKQVQAFVELAVKC  138 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~li~~c  138 (163)
                      |||+|+++++++++..||....... ....+......+                       ........+..+.+++.+|
T Consensus       202 iwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  280 (308)
T 3g33_A          202 MWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEM  280 (308)
T ss_dssp             HHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHH
Confidence            9999999999999988875443322 222111100000                       0001123457899999999


Q ss_pred             cccCcCCCCCHHHHHH
Q 043958          139 VSESAEDRPTMIDVAK  154 (163)
Q Consensus       139 l~~~p~~Rpt~~~i~~  154 (163)
                      |+.||++|||+.++++
T Consensus       281 L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          281 LTFNPHKRISAFRALQ  296 (308)
T ss_dssp             TCSSTTTSCCHHHHHT
T ss_pred             hcCCCccCCCHHHHhc
Confidence            9999999999999986

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=2.2e-33  Score=208.37  Aligned_cols=146  Identities=18%  Similarity=0.194  Sum_probs=108.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+|||++.++.+||+|||+++........   ....+|+.|+|||.+.+..++.++|
T Consensus       172 qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~D  245 (464)
T 3ttj_A          172 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVD  245 (464)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC-------CCCTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCccc---CCCcccccccCHHHHcCCCCCHHHH
Confidence            7899999999   899999999999999999999999999999766543222   2346899999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhh--------------------------------------hcccchh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE--------------------------------------LCIQSSE  123 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~  123 (163)
                      |||+||++++++++..||......+. +..+...-                                      .......
T Consensus       246 iwSlG~il~ell~g~~pF~g~~~~~~-~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  324 (464)
T 3ttj_A          246 IWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH  324 (464)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccccccccc
Confidence            99999999999999888765432221 11111100                                      0000111


Q ss_pred             hHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          124 KDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       124 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ....++.+.+|+.+||..||++|||+.++++
T Consensus       325 ~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          325 NKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1223678999999999999999999999986

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.1e-33  Score=200.05  Aligned_cols=152  Identities=24%  Similarity=0.347  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC-eEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV-AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~-~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||....++++||||||+||+++.++. +||+|||++........     ...++..|+|||.+.+..++.++
T Consensus       110 qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~  184 (307)
T 2eva_A          110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMT-----NNKGSAAWMAPEVFEGSNYSEKC  184 (307)
T ss_dssp             HHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHH
T ss_pred             HHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccc-----cCCCCCceEChhhhCCCCCCcHH
Confidence            7889999999211189999999999999988886 79999999865543221     23588999999999988899999


Q ss_pred             ceeecchhhHHHhhhccccccccch-hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTF-DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      ||||+|+++++++++..|+...... ...........   ........+..+.+++.+||+.||++|||+.++++.|+.+
T Consensus       185 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~  261 (307)
T 2eva_A          185 DVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT---RPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL  261 (307)
T ss_dssp             HHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC---CCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC---CCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            9999999999999998887543221 11111111111   1112234567899999999999999999999999999988


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      .+
T Consensus       262 ~~  263 (307)
T 2eva_A          262 MR  263 (307)
T ss_dssp             GG
T ss_pred             HH
Confidence            64

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.2e-33  Score=200.90  Aligned_cols=146  Identities=18%  Similarity=0.249  Sum_probs=115.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++++|||++..........  ....|+..|+|||.+.+..++.++|
T Consensus       149 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  223 (321)
T 2c30_A          149 AVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR--KSLVGTPYWMAPEVISRSLYATEVD  223 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCB--CCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcccc--ccccCCccccCHhhhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999997765433221  2346899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+...... +........ ...........++.+.+++.+||+.||++|||+.++++
T Consensus       224 v~slG~il~el~~g~~pf~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          224 IWSLGIMVIEMVDGEPPYFSDSPV-QAMKRLRDS-PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHS-SCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHhcC-CCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999998887654332 222222222 11222233345678999999999999999999999986

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.6e-33  Score=209.76  Aligned_cols=157  Identities=14%  Similarity=0.215  Sum_probs=121.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcc-----cccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~   73 (163)
                      ||+.||+|||   +++|+||||||+|||+   +.++.+||+|||+++.........     ......|+..|+|||.+.+
T Consensus       111 qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  187 (483)
T 3sv0_A          111 QMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLG  187 (483)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcC
Confidence            7899999999   8999999999999999   588999999999998765443321     1124568999999999999


Q ss_pred             CCCCcccceeecchhhHHHhhhccccccccc--hhhccchhhhhhhccc-chhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECNT--FDEIVDPVIREELCIQ-SSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      ..++.++||||||+++|+++++..||.....  ..+.+..+........ ......++.++.+++..||+.+|++||++.
T Consensus       188 ~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~  267 (483)
T 3sv0_A          188 IEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYS  267 (483)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred             CCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHH
Confidence            9999999999999999999999888764322  2222222222221111 111134467899999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 043958          151 DVAKQLRQAYR  161 (163)
Q Consensus       151 ~i~~~L~~~~~  161 (163)
                      ++++.|++++.
T Consensus       268 el~~~L~~l~~  278 (483)
T 3sv0_A          268 YLKRLFRDLFI  278 (483)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998864

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.2e-33  Score=199.99  Aligned_cols=143  Identities=20%  Similarity=0.305  Sum_probs=115.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.+|.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       113 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  187 (337)
T 1o6l_A          113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT--MKTFCGTPEYLAPEVLEDNDYGRAVD  187 (337)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC--BCCCEECGGGCCGGGGSSSCBCTTHH
T ss_pred             HHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc--ccccccChhhCChhhhcCCCCCchhh
Confidence            7899999999   899999999999999999999999999999764332222  12446899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|++++++++|..||... ...++...+.......+    ...++.+.+++.+||+.||++||     ++.++++
T Consensus       188 iwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          188 WWGLGVVMYEMMCGRLPFYNQ-DHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             cccchhHHHHHhcCCCCCCCC-CHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            999999999999998887643 33444444444432222    23567899999999999999999     8888875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.1e-34  Score=203.58  Aligned_cols=148  Identities=22%  Similarity=0.195  Sum_probs=114.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++................|++.|+|||.+.+..+ +.++
T Consensus       113 qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  189 (323)
T 3tki_A          113 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV  189 (323)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHH
T ss_pred             HHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcc
Confidence            7899999999   89999999999999999999999999999976644333333334578999999999987775 6789


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||+|+++++++++..||.................  .........+..+.+++.+||+.||++|||+.++++
T Consensus       190 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC--TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc--ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            999999999999999988764433222222211111  111223345678899999999999999999999875

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=6.8e-34  Score=198.33  Aligned_cols=152  Identities=23%  Similarity=0.304  Sum_probs=118.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++........... ....++..|+|||.+.+..++.++|
T Consensus       117 qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  192 (279)
T 1qpc_A          117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAR-EGAKFPIKWTAPEAINYGTFTIKSD  192 (279)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECC-TTCCCCTTTSCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccc-cCCCCccCccChhhhccCCCCchhh
Confidence            7899999999   89999999999999999999999999999977654432221 1334677899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+.........   ........+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       193 i~slG~il~el~~~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          193 VWSFGILLTEIVTHGRIPYP-GMTNPEVIQNLERGY---RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             HHHHHHHHHHHHTTTCCSST-TCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCCCCc-ccCHHHHHHHHhccc---CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            9999999999999 555543 333333333322221   11122345678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       269 ~  269 (279)
T 1qpc_A          269 T  269 (279)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.98  E-value=1.4e-33  Score=204.33  Aligned_cols=146  Identities=19%  Similarity=0.200  Sum_probs=118.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee--CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~--~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||+|||   +.+++||||||+||++  +.++.+||+|||++..........   ...|++.|+|||.+.+..++.+
T Consensus       195 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~  268 (373)
T 2x4f_A          195 QICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLK---VNFGTPEFLAPEVVNYDFVSFP  268 (373)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCC---CCCSSCTTCCHHHHTTCBCCHH
T ss_pred             HHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccc---cccCCCcEeChhhccCCCCCcH
Confidence            7899999999   8999999999999999  667889999999998765443322   3358999999999988889999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+|+++++++++..||.... ..+.+..+...............++.+.+|+.+||+.||++|||+.++++
T Consensus       269 ~DiwslG~il~elltg~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          269 TDMWSVGVIAYMLLSGLSPFLGDN-DAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HhHHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999988876443 33344444443333333334456788999999999999999999999987

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.98  E-value=6.1e-33  Score=197.03  Aligned_cols=155  Identities=15%  Similarity=0.159  Sum_probs=120.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee----CCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----   72 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----   72 (163)
                      |++.||+|||   +.+++||||||+||++    +.++.+||+|||++..........   ...++..|+|||.+.     
T Consensus       120 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~  193 (319)
T 4euu_A          120 DVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFV---SLYGTEEYLHPDMYERAVLR  193 (319)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHHTSC
T ss_pred             HHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCcee---ecccCCCccCHHHhhhcccc
Confidence            7899999999   8999999999999999    777889999999998765544322   335889999999886     


Q ss_pred             ---cCCCCcccceeecchhhHHHhhhccccccccc---hhhccchhhhhhh---------------------cccchhhH
Q 043958           73 ---TGDYNEKCDVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREEL---------------------CIQSSEKD  125 (163)
Q Consensus        73 ---~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~---------------------~~~~~~~~  125 (163)
                         +..++.++||||+|+++++++++..||.....   ..+.+.....+.+                     ........
T Consensus       194 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (319)
T 4euu_A          194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSR  273 (319)
T ss_dssp             CCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCH
T ss_pred             ccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccch
Confidence               46789999999999999999999988763222   2222222222211                     11123345


Q ss_pred             HHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhhc
Q 043958          126 KQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYRF  162 (163)
Q Consensus       126 ~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~~  162 (163)
                      ..+..+.+++.+||+.||++|||+.++++...+....
T Consensus       274 ~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~  310 (319)
T 4euu_A          274 GLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (319)
T ss_dssp             HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred             hHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence            6788999999999999999999999999988876543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.98  E-value=4.8e-34  Score=199.83  Aligned_cols=153  Identities=16%  Similarity=0.274  Sum_probs=119.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++........... ....++..|+|||.+.+..++.++|
T Consensus       119 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  194 (288)
T 3kfa_A          119 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH-AGAKFPIKWTAPESLAYNKFSIKSD  194 (288)
T ss_dssp             HHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEE-TTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccc-cCCccccCcCChhhhccCCCCchhh
Confidence            7899999999   89999999999999999999999999999977654433222 2335677899999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..+++...............   .........++.+.+++.+||+.||++|||+.++++.|+.+..
T Consensus       195 i~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~  271 (288)
T 3kfa_A          195 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD---YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  271 (288)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcc---CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999444444333333333322222   1112223456789999999999999999999999999998764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.98  E-value=2e-33  Score=200.92  Aligned_cols=142  Identities=20%  Similarity=0.255  Sum_probs=113.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      |++.||.|||   +.+++||||||+||+++.++.+||+|||++..........   ...|++.|+|||.+.+..+ +.++
T Consensus       116 qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~  189 (336)
T 3h4j_B          116 QIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLK---TSCGSPNYAAPEVINGKLYAGPEV  189 (336)
T ss_dssp             HHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTC---CCTTSTTTSCGGGSCCSGGGCHHH
T ss_pred             HHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccc---cccCCcCcCCHHHHcCCCCCCCcc
Confidence            7899999999   8999999999999999999999999999997665443222   3468999999999987776 6799


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||+|+++++++++..||.. ....++...+.......    +...++.+.+++.+||+.||.+|||+.++++
T Consensus       190 DiwslG~il~~ll~g~~Pf~~-~~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          190 DVWSCGIVLYVMLVGRLPFDD-EFIPNLFKKVNSCVYVM----PDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             HHHHHHHHHHHHHHSSCSSBC-SSSTTCBCCCCSSCCCC----CTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             chhHHHHHHHHHHhCCCCCCC-ccHHHHHHHHHcCCCCC----cccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            999999999999999888753 33333444433332222    2234578999999999999999999999976

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.98  E-value=2.9e-34  Score=205.76  Aligned_cols=147  Identities=16%  Similarity=0.262  Sum_probs=105.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc--------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--------   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------   73 (163)
                      |++.||+|||   +.+++||||||+|||++ ++.+||+|||++................||+.|+|||.+.+        
T Consensus       116 qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  191 (343)
T 3dbq_A          116 NMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG  191 (343)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC------
T ss_pred             HHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhcccccccc
Confidence            7899999999   89999999999999997 57899999999987755443333334568999999999864        


Q ss_pred             ---CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 ---GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ---~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                         ..++.++||||+|+++++++++..||....................  ......+..+.+++.+||+.||.+|||+.
T Consensus       192 ~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~L~~dp~~Rpt~~  269 (343)
T 3dbq_A          192 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIP  269 (343)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC--CCCCCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             ccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCccc--CCcccCCHHHHHHHHHHcCCChhHCCCHH
Confidence               5688899999999999999999988764322212222222111111  11122346789999999999999999999


Q ss_pred             HHHH
Q 043958          151 DVAK  154 (163)
Q Consensus       151 ~i~~  154 (163)
                      ++++
T Consensus       270 e~l~  273 (343)
T 3dbq_A          270 ELLA  273 (343)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            9986

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.98  E-value=1.5e-33  Score=197.28  Aligned_cols=148  Identities=20%  Similarity=0.291  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCCCC--eEeccCCCCCeeeCCCCC-----eEECccccccccCCCCCcccccCccccccccCccccc--
Q 043958            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHV-----AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT--   72 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~H~dik~~nil~~~~~~-----~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~--   72 (163)
                      |++.||+|||   +.+  ++||||||+||+++.++.     ++|+|||++......     .....++..|+|||.+.  
T Consensus       130 ~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~g~~~y~aPE~~~~~  201 (287)
T 4f0f_A          130 DIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS-----VSGLLGNFQWMAPETIGAE  201 (287)
T ss_dssp             HHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-----EECCCCCCTTSCGGGSSCS
T ss_pred             HHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc-----ccccCCCccccCchhhccC
Confidence            7899999999   888  999999999999988776     999999998644332     12346889999999984  


Q ss_pred             cCCCCcccceeecchhhHHHhhhccccccccchhh-ccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           73 TGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDE-IVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        73 ~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      ...++.++|+||+|+++++++++..|+........ .........  ........+++.+.+++.+||+.||++|||+.+
T Consensus       202 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  279 (287)
T 4f0f_A          202 EESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG--LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSY  279 (287)
T ss_dssp             SCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSC--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccC--CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHH
Confidence            34578899999999999999999888754332221 111112221  122223345678999999999999999999999


Q ss_pred             HHHHHHHH
Q 043958          152 VAKQLRQA  159 (163)
Q Consensus       152 i~~~L~~~  159 (163)
                      +++.|+++
T Consensus       280 ll~~L~~l  287 (287)
T 4f0f_A          280 IVKELSEL  287 (287)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHHhC
Confidence            99999864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.98  E-value=7.7e-34  Score=199.56  Aligned_cols=154  Identities=17%  Similarity=0.281  Sum_probs=113.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++......... .......++..|+|||.+.+..++.++
T Consensus       122 qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  198 (295)
T 3ugc_A          122 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVAS  198 (295)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHH
Confidence            7899999999   899999999999999999999999999999876544322 111233466789999999988999999


Q ss_pred             ceeecchhhHHHhhhccccccccch-h--------------hccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTF-D--------------EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAED  145 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~  145 (163)
                      ||||+|+++++++++..|+...... .              ..... ....  ...+....++..+.+++.+||+.||++
T Consensus       199 Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~  275 (295)
T 3ugc_A          199 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL-LKNN--GRLPRPDGCPDEIYMIMTECWNNNVNQ  275 (295)
T ss_dssp             HHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH-HHTT--CCCCCCTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH-Hhcc--CcCCCCcCcCHHHHHHHHHHcCCChhh
Confidence            9999999999999987765421110 0              00011 1111  111223345678999999999999999


Q ss_pred             CCCHHHHHHHHHHHhh
Q 043958          146 RPTMIDVAKQLRQAYR  161 (163)
Q Consensus       146 Rpt~~~i~~~L~~~~~  161 (163)
                      |||+.++++.|+++.+
T Consensus       276 Rps~~el~~~L~~l~~  291 (295)
T 3ugc_A          276 RPSFRDLALRVDQIRD  291 (295)
T ss_dssp             SCCHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHH
Confidence            9999999999999865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.98  E-value=5e-34  Score=198.16  Aligned_cols=148  Identities=22%  Similarity=0.339  Sum_probs=109.7

Q ss_pred             hHHHHHHHHhcCCCCC---eEeccCCCCCeeeCC--------CCCeEECccccccccCCCCCcccccCccccccccCccc
Q 043958            2 EIANALAYLHVGFPRP---IVFKNIKLSSILFDE--------DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEY   70 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~---~~H~dik~~nil~~~--------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~   70 (163)
                      |++.||+|||   +.+   ++||||||+||+++.        ++.++++|||++.........    ...++..|+|||.
T Consensus       113 ~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~~~~y~aPE~  185 (271)
T 3dtc_A          113 QIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKM----SAAGAYAWMAPEV  185 (271)
T ss_dssp             HHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-----------------CCGGGSCHHH
T ss_pred             HHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccccc----CCCCccceeCHHH
Confidence            7899999999   777   999999999999986        778999999999765543322    2358889999999


Q ss_pred             cccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           71 VTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        71 ~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      +.+..++.++|+||+|+++++++++..|+....... ..........  .......++..+.+++.+||+.+|++|||+.
T Consensus       186 ~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~  262 (271)
T 3dtc_A          186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA-VAYGVAMNKL--ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFT  262 (271)
T ss_dssp             HHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH-HHHHHHTSCC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHhhhcCCC--CCCCCcccCHHHHHHHHHHhcCCcccCcCHH
Confidence            998889999999999999999999988876443322 2222222221  1122234567899999999999999999999


Q ss_pred             HHHHHHHHH
Q 043958          151 DVAKQLRQA  159 (163)
Q Consensus       151 ~i~~~L~~~  159 (163)
                      ++++.|+++
T Consensus       263 e~l~~L~~l  271 (271)
T 3dtc_A          263 NILDQLTTI  271 (271)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHhcC
Confidence            999999864

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.98  E-value=2.7e-34  Score=216.55  Aligned_cols=152  Identities=24%  Similarity=0.281  Sum_probs=119.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++......... .....++..|+|||.+.++.++.++|
T Consensus       371 qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~sD  446 (535)
T 2h8h_A          371 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-RQGAKFPIKWTAPEAALYGRFTIKSD  446 (535)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT-TCSTTSCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec-ccCCcCcccccCHHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997665322111 11234667899999999889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++|++++ +..|+. .....++...+..+.   .......++..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       447 vwSlGv~l~el~t~g~~P~~-~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          447 VWSFGILLTELTTKGRVPYP-GMVNREVLDQVERGY---RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             HHHHHHHHHHHTTTTCCSST-TCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            9999999999999 555543 434444444433221   12222346678999999999999999999999999999876


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       523 ~  523 (535)
T 2h8h_A          523 T  523 (535)
T ss_dssp             C
T ss_pred             h
Confidence            4

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.98  E-value=1.1e-33  Score=197.21  Aligned_cols=148  Identities=21%  Similarity=0.284  Sum_probs=112.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........     ...++..|+|||.+.+..++.++|
T Consensus       125 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~D  196 (278)
T 1byg_A          125 DVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  196 (278)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccccc-----CCCccccccCHHHhCCCCCCchhc
Confidence            7899999999   89999999999999999999999999999875543322     224677899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....+.........   ........++.+.+++.+||+.||++|||+.++++.|+++.
T Consensus       197 i~slG~il~~l~t~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          197 VWSFGILLWEIYSFGRVPYP-RIPLKDVVPRVEKGY---KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             HHHHHHHHHHHHTTSCCSCT-TSCGGGHHHHHTTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHhcCC---CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            9999999999998 655543 333333333332221   11222345678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       273 ~  273 (278)
T 1byg_A          273 T  273 (278)
T ss_dssp             H
T ss_pred             h
Confidence            4

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=8.8e-34  Score=198.62  Aligned_cols=154  Identities=18%  Similarity=0.278  Sum_probs=120.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++
T Consensus       118 qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  194 (287)
T 1u59_A          118 QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS  194 (287)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchh
Confidence            7899999999   8999999999999999999999999999998775443321 12233467889999999888899999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||+|++++++++ +..|+.. ....++...+....   ........++.+.+++.+||+.+|++|||+.++++.|+++
T Consensus       195 Di~slG~il~ellt~g~~p~~~-~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  270 (287)
T 1u59_A          195 DVWSYGVTMWEALSYGQKPYKK-MKGPEVMAFIEQGK---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  270 (287)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTT-CCTHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHcCCCCCccc-CCHHHHHHHHhcCC---cCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            99999999999998 7666543 33333333332221   1112234567899999999999999999999999999998


Q ss_pred             hhc
Q 043958          160 YRF  162 (163)
Q Consensus       160 ~~~  162 (163)
                      +.+
T Consensus       271 ~~~  273 (287)
T 1u59_A          271 YYS  273 (287)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            753

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.98  E-value=8.1e-34  Score=216.77  Aligned_cols=153  Identities=18%  Similarity=0.290  Sum_probs=116.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++.......... .....+++.|+|||.+.++.++.++
T Consensus       444 qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~s  520 (613)
T 2ozo_A          444 QVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS  520 (613)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHH
Confidence            7899999999   89999999999999999999999999999987654332211 1122355789999999988999999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      ||||||+++|++++ +..||.. ....++...+..+.   .......++..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       521 DvwSlGv~l~ellt~G~~Pf~~-~~~~~~~~~i~~~~---~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          521 DVWSYGVTMWEALSYGQKPYKK-MKGPEVMAFIEQGK---RMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTT-CCSHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHcCC---CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            99999999999998 6666543 33344444433332   1222334678899999999999999999999999999987


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      +.
T Consensus       597 ~~  598 (613)
T 2ozo_A          597 YY  598 (613)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.98  E-value=1e-33  Score=199.32  Aligned_cols=154  Identities=18%  Similarity=0.251  Sum_probs=118.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++......... .......++..|+|||.+.+..++.++
T Consensus       134 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  210 (302)
T 4e5w_A          134 QICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIAS  210 (302)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcch
Confidence            7899999999   899999999999999999999999999999877654432 222234577889999999888899999


Q ss_pred             ceeecchhhHHHhhhcccccccc--------------chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECN--------------TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      |+||+|+++++++++..|+....              ............   .........++.+.+++.+||+.||++|
T Consensus       211 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~R  287 (302)
T 4e5w_A          211 DVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEG---KRLPCPPNCPDEVYQLMRKCWEFQPSNR  287 (302)
T ss_dssp             HHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTT---CCCCCCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred             hHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhcc---CCCCCCCCCCHHHHHHHHHHcCCCCCCC
Confidence            99999999999999877643211              011111111111   1112223456789999999999999999


Q ss_pred             CCHHHHHHHHHHHhh
Q 043958          147 PTMIDVAKQLRQAYR  161 (163)
Q Consensus       147 pt~~~i~~~L~~~~~  161 (163)
                      ||+.++++.|+++.+
T Consensus       288 ps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          288 TSFQNLIEGFEALLK  302 (302)
T ss_dssp             CCHHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHHhC
Confidence            999999999998863

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.98  E-value=1.7e-33  Score=204.74  Aligned_cols=146  Identities=18%  Similarity=0.186  Sum_probs=116.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC--CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~--~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||+|||   +.+++||||||+||+++.  ++.+||+|||++..........   ...+|+.|+|||.+.+..++.+
T Consensus       157 qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~  230 (387)
T 1kob_A          157 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK---VTTATAEFAAPEIVDREPVGFY  230 (387)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE---EECSSGGGCCHHHHTTCCBCHH
T ss_pred             HHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCccee---eeccCCCccCchhccCCCCCCc
Confidence            7899999999   899999999999999974  4779999999998775443222   2358899999999998889999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||||+|+++++++++..||.... ..+.+..+...............+..+.+++.+||+.||++|||+.++++
T Consensus       231 ~DiwSlG~il~elltg~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          231 TDMWAIGVLGYVLLSGLSPFAGED-DLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             ccEeeHhHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            999999999999999988876443 23333333333333333333456788999999999999999999999986

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2e-33  Score=200.73  Aligned_cols=153  Identities=18%  Similarity=0.244  Sum_probs=112.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++
T Consensus       155 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  231 (333)
T 1mqb_A          155 GIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS  231 (333)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHH
T ss_pred             HHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchh
Confidence            7899999999   8999999999999999999999999999997765432211 11122456789999999888899999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||+|++++++++ +..|+. .....++...+....   ..+....++..+.+++.+||+.+|++||++.++++.|+++
T Consensus       232 Di~slG~il~ellt~g~~pf~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~  307 (333)
T 1mqb_A          232 DVWSFGIVMWEVMTYGERPYW-ELSNHEVMKAINDGF---RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL  307 (333)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTT-TCCHHHHHHHHHTTC---CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHcCCCCCcc-cCCHHHHHHHHHCCC---cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            99999999999998 666654 333333433333221   1112234567899999999999999999999999999988


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      .+
T Consensus       308 ~~  309 (333)
T 1mqb_A          308 IR  309 (333)
T ss_dssp             HH
T ss_pred             Hh
Confidence            65

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.98  E-value=2.9e-33  Score=195.53  Aligned_cols=146  Identities=21%  Similarity=0.243  Sum_probs=117.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC---eEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||+++.++.   ++++|||++..........   ...++..|+|||.+.+..++.
T Consensus       113 ~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~  186 (284)
T 3kk8_A          113 QILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSK  186 (284)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCC---CSCSCGGGCCHHHHTTCCBCT
T ss_pred             HHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcccc---CCCCCcCCcCchhhcCCCCCc
Confidence            7899999999   899999999999999976655   9999999997665443322   346889999999999888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+.... .................+.....++.+.+++.+||+.||++|||+.++++
T Consensus       187 ~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          187 PVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ccchHHHHHHHHHHHHCCCCCCCCc-hhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            9999999999999999988876433 33344444444333333334456788999999999999999999999987

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.98  E-value=1e-33  Score=198.58  Aligned_cols=154  Identities=20%  Similarity=0.247  Sum_probs=119.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++........... .....++..|+|||.+.+..++.++
T Consensus       125 qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  201 (291)
T 1xbb_A          125 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS  201 (291)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhh
Confidence            7899999999   89999999999999999999999999999987654433221 1123456789999999888889999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||+|++++++++ +..|+. .....++........   ........+..+.+++.+||+.||++|||+.++++.|+++
T Consensus       202 Di~slG~il~~l~~~g~~p~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  277 (291)
T 1xbb_A          202 DVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEKGE---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  277 (291)
T ss_dssp             HHHHHHHHHHHHHTTTCCSST-TCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCCC-CCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            99999999999999 666654 333333333322221   1112234567899999999999999999999999999998


Q ss_pred             hhc
Q 043958          160 YRF  162 (163)
Q Consensus       160 ~~~  162 (163)
                      +..
T Consensus       278 ~~~  280 (291)
T 1xbb_A          278 YYD  280 (291)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.98  E-value=1.1e-33  Score=206.94  Aligned_cols=148  Identities=14%  Similarity=0.215  Sum_probs=118.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC----CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD----YN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~----~~   77 (163)
                      ||+.||+|||   +.+++||||||+|||++.++.+||+|||+++......... .....||+.|+|||.+.+..    ++
T Consensus       176 qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~~  251 (410)
T 3v8s_A          176 EVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVR-CDTAVGTPDYISPEVLKSQGGDGYYG  251 (410)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEE-CCSCCSCGGGCCHHHHHTTTTTCEEE
T ss_pred             HHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCccc-ccCCcCCccccCHHHhhccCCCcCCC
Confidence            7899999999   8999999999999999999999999999998765443222 22457999999999998655    78


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCC--CCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAED--RPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~--Rpt~~~i~~  154 (163)
                      .++|+||+|+++|++++|..||... ...+....+.........+.....+..+++|+.+||..+|.+  ||+++++++
T Consensus       252 ~~~DiwSlGvilyell~G~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          252 RECDWWSVGVFLYEMLVGDTPFYAD-SLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             CcceEecchHHHHHHHhCCCCCCCC-ChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            8999999999999999998887643 444455555544333333333456788999999999999988  999999886

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=4.2e-33  Score=200.71  Aligned_cols=144  Identities=20%  Similarity=0.191  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-------------------------CCCeEECccccccccCCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-------------------------DHVAKLFDFSLAESIPDGETHIKD   56 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-------------------------~~~~~l~dfg~~~~~~~~~~~~~~   56 (163)
                      ||+.||+|||   +.+++||||||+|||++.                         ++.+||+|||++........    
T Consensus       145 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~----  217 (360)
T 3llt_A          145 EILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG----  217 (360)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCC----
T ss_pred             HHHHHHHHHH---HCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCCCc----
Confidence            7899999999   899999999999999975                         78899999999976543322    


Q ss_pred             cCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhccc----------------
Q 043958           57 AIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ----------------  120 (163)
Q Consensus        57 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------  120 (163)
                       ...+|+.|+|||.+.+..++.++||||+|+++++++++..||....... .+..........+                
T Consensus       218 -~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  295 (360)
T 3llt_A          218 -SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME-HLAMMESIIQPIPKNMLYEATKTNGSKYV  295 (360)
T ss_dssp             -SCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHTCCCCHHHHHHHTTSGGGGGE
T ss_pred             -CccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHH-HHHHHHHhcCCCCHHHHhhhhhccCcccc
Confidence             3468899999999999999999999999999999999988876433221 1111100000000                


Q ss_pred             --------------------------chhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          121 --------------------------SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       121 --------------------------~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                                                .......++.+.+|+.+||+.||++|||+.++++
T Consensus       296 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          296 NKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             ETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence                                      0000011267889999999999999999999875

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.97  E-value=1e-33  Score=201.62  Aligned_cols=150  Identities=17%  Similarity=0.243  Sum_probs=115.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++.........   ....++..|+|||.+.+..++.++|
T Consensus       150 qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~D  223 (327)
T 1fvr_A          150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK---TMGRLPVRWMAIESLNYSVYTTNSD  223 (327)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC-------CCTTTCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCccceEEEcCCCeEEEcccCcCccccccccc---cCCCCCccccChhhhccccCCchhc
Confidence            7899999999   899999999999999999999999999998644322111   1234677899999998888999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|++++++++ +..|+. .....++........   ........+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       224 i~slG~il~ellt~g~~pf~-~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          224 VWSYGVLLWEIVSLGGTPYC-GMTCAELYEKLPQGY---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             HHHHHHHHHHHHTTSCCTTT-TCCHHHHHHHGGGTC---CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHcCCCCCCC-CCcHHHHHHHhhcCC---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999998 666654 333333333332221   11122245678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       300 ~  300 (327)
T 1fvr_A          300 E  300 (327)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=5.5e-33  Score=197.43  Aligned_cols=146  Identities=21%  Similarity=0.255  Sum_probs=116.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC----CeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      |++.||+|||   +.+++|+||||+||+++.++    .++++|||++..........   ...+++.|+|||.+.+..++
T Consensus       123 qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~  196 (321)
T 2a2a_A          123 QILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFK---NIFGTPEFVAPEIVNYEPLG  196 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCC---CCCSCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCcccccc---ccCCCCCccCcccccCCCCC
Confidence            7899999999   89999999999999999888    79999999997765543222   33588999999999988899


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++|+||+|+++++++++..|+.... ..+....+...............+..+.+++.+||+.||++|||+.++++
T Consensus       197 ~~~Di~slG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          197 LEADMWSIGVITYILLSGASPFLGDT-KQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             THHHHHHHHHHHHHHHHSCCSSCCSS-HHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             CccccHHHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            99999999999999999988876433 33333333333222222223345678999999999999999999999986

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=4.6e-33  Score=199.34  Aligned_cols=149  Identities=24%  Similarity=0.342  Sum_probs=115.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC--CeEECccccccccCCCCC--cccccCccccccccCcccccc--CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDGET--HIKDAIPIGIMGFVATEYVTT--GD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~--~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~~~~PE~~~~--~~   75 (163)
                      |++.||+|||   +.+++||||||+||+++.++  .++|+|||++........  ........+++.|+|||.+.+  ..
T Consensus       176 qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  252 (345)
T 3hko_A          176 QIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES  252 (345)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSC
T ss_pred             HHHHHHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCC
Confidence            7899999999   89999999999999998776  899999999976543221  112224468999999999875  56


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++||||+|+++++++++..||.... ..+..............+.....++.+.+++.+||+.+|++|||+.++++
T Consensus       253 ~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          253 YGPKCDAWSAGVLLHLLLMGAVPFPGVN-DADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCCCCCC-hHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            8899999999999999999988875443 33334444444433444444456788999999999999999999999987

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.97  E-value=1.2e-33  Score=204.99  Aligned_cols=140  Identities=15%  Similarity=0.086  Sum_probs=109.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-------   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-------   74 (163)
                      ||+.||+|||   +.+++||||||+|||++.++.+||+|||+++.....     .....| ..|+|||.+.+.       
T Consensus       214 qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~  284 (377)
T 3byv_A          214 QVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR-----VVSSVS-RGFEPPELEARRATISYHR  284 (377)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE-----EECCCC-TTCCCHHHHHHHTSTHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc-----ccCCCC-cCccChhhhcccccccccc
Confidence            7899999999   899999999999999999999999999999754321     113346 899999999877       


Q ss_pred             ----CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           75 ----DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        75 ----~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                          .++.++||||||+++|+++++..||..... ...........        ...++.+.+++.+||+.||++|||+.
T Consensus       285 ~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~-~~~~~~~~~~~--------~~~~~~~~~li~~~L~~dp~~Rpt~~  355 (377)
T 3byv_A          285 DRRTLMTFSFDAWALGLVIYWIWCADLPITKDAA-LGGSEWIFRSC--------KNIPQPVRALLEGFLRYPKEDRLLPL  355 (377)
T ss_dssp             CCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGGSSC--------CCCCHHHHHHHHHHTCSSGGGCCCHH
T ss_pred             cccccCChhhhHHHHHHHHHHHHHCCCCCccccc-ccchhhhhhhc--------cCCCHHHHHHHHHHcCCCchhCCCHH
Confidence                799999999999999999999888754332 22222222111        23456899999999999999999999


Q ss_pred             HHHH--HHHHH
Q 043958          151 DVAK--QLRQA  159 (163)
Q Consensus       151 ~i~~--~L~~~  159 (163)
                      ++++  +++.+
T Consensus       356 e~l~hp~f~~~  366 (377)
T 3byv_A          356 QAMETPEYEQL  366 (377)
T ss_dssp             HHHTSHHHHHH
T ss_pred             HHhhChHHHHH
Confidence            9986  55544

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=8.7e-34  Score=217.24  Aligned_cols=153  Identities=20%  Similarity=0.251  Sum_probs=117.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++......... ......++..|+|||.+.+..++.++
T Consensus       477 qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~s  553 (635)
T 4fl3_A          477 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS  553 (635)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHH
Confidence            7899999999   8999999999999999999999999999998765443221 11123466789999999988999999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      ||||||++++++++ +..||. .....++...+..+.   .......++.++.+++.+||+.||++|||+.++++.|+++
T Consensus       554 DvwSlGv~l~ellt~G~~Pf~-~~~~~~~~~~i~~~~---~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  629 (635)
T 4fl3_A          554 DVWSFGVLMWEAFSYGQKPYR-GMKGSEVTAMLEKGE---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  629 (635)
T ss_dssp             HHHHHHHHHHHHHTTTCCSST-TCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCC---CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            99999999999998 666654 333334444333332   1222334668899999999999999999999999999988


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      +.
T Consensus       630 ~~  631 (635)
T 4fl3_A          630 YY  631 (635)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.97  E-value=9.1e-34  Score=198.61  Aligned_cols=154  Identities=18%  Similarity=0.322  Sum_probs=118.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++.......... ......++..|+|||.+.+..++.++
T Consensus       129 ~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  205 (291)
T 1u46_A          129 QVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS  205 (291)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchh
Confidence            7899999999   8999999999999999999999999999998775543322 12233567789999999888889999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |+||+|++++++++ +..|+. .....+...........  .+.....+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       206 Di~slG~il~~l~~~g~~p~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~  282 (291)
T 1u46_A          206 DTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGER--LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  282 (291)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTT-TCCHHHHHHHHHTSCCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCcc-cCCHHHHHHHHHccCCC--CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence            99999999999999 666654 33333444333332211  122234567899999999999999999999999999987


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      ..
T Consensus       283 ~~  284 (291)
T 1u46_A          283 QP  284 (291)
T ss_dssp             C-
T ss_pred             Cc
Confidence            64

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=6.2e-33  Score=200.33  Aligned_cols=148  Identities=12%  Similarity=0.149  Sum_probs=116.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-----------CCCeEECccccccccCCCCCcccccCccccccccCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-----------DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEY   70 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-----------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~   70 (163)
                      |++.||+|||   +.+|+||||||+|||++.           ++.+||+|||+++.+.............||..|+|||.
T Consensus       180 qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~  256 (365)
T 3e7e_A          180 RMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEM  256 (365)
T ss_dssp             HHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHH
T ss_pred             HHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHH
Confidence            7899999999   899999999999999988           89999999999976543333333334579999999999


Q ss_pred             cccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC-CCH
Q 043958           71 VTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR-PTM  149 (163)
Q Consensus        71 ~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R-pt~  149 (163)
                      +.+..++.++||||+|+++|++++|..||................     .    .....+.+++..|++.+|.+| |++
T Consensus       257 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~~~~l~~~p~~r~~~~  327 (365)
T 3e7e_A          257 LSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRR-----L----PHLDMWNEFFHVMLNIPDCHHLPSL  327 (365)
T ss_dssp             HTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEEECSCCTT-----C----SSHHHHHHHHHHHHCCCCTTCCCCH
T ss_pred             hcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCceeechhccc-----c----CcHHHHHHHHHHHcCCCCCCcchHH
Confidence            999899999999999999999999999886543322111111111     0    124578899999999999998 578


Q ss_pred             HHHHHHHHHHhh
Q 043958          150 IDVAKQLRQAYR  161 (163)
Q Consensus       150 ~~i~~~L~~~~~  161 (163)
                      .++.+.|++...
T Consensus       328 ~~l~~~l~~~l~  339 (365)
T 3e7e_A          328 DLLRQKLKKVFQ  339 (365)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            888888887654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=3.2e-33  Score=196.72  Aligned_cols=145  Identities=16%  Similarity=0.296  Sum_probs=112.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC---CCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD---YNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~---~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++..........  ....+++.|+|||.+.+..   ++.
T Consensus       145 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~~  219 (298)
T 2zv2_A          145 DLIKGIEYLH---YQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVGTPAFMAPESLSETRKIFSGK  219 (298)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEE--CCCCSCGGGCCGGGCCTTCCCEESH
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccc--cCCcCCccccChhhhccCCCCCCCc
Confidence            7899999999   8999999999999999999999999999997765433222  2346899999999987655   367


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..||.... ...+...+.....  ..+.....++.+.+++.+||+.||++|||+.++++
T Consensus       220 ~~Di~slG~~l~~l~~g~~pf~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          220 ALDVWAMGVTLYCFVFGQCPFMDER-IMCLHSKIKSQAL--EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHCCC--CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             hhhhHhHHHHHHHHHHCCCCCCCcc-HHHHHHHHhcccC--CCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            8999999999999999988875432 2222222222221  11222245678999999999999999999999875

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=6.3e-33  Score=197.39  Aligned_cols=144  Identities=23%  Similarity=0.333  Sum_probs=110.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc----------ccccCccccccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH----------IKDAIPIGIMGFVATEYV   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~----------~~~~~~~~~~~~~~PE~~   71 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++.........          .......||+.|+|||.+
T Consensus       172 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  248 (332)
T 3qd2_B          172 QIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI  248 (332)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHH
T ss_pred             HHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHh
Confidence            7899999999   899999999999999999999999999999877654321          111234689999999999


Q ss_pred             ccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           72 TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        72 ~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      .+..++.++|+||+|+++++++++..++...   ..........   .........++.+.+++.+||+.||++|||+.+
T Consensus       249 ~~~~~~~~~Di~slG~il~el~~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~  322 (332)
T 3qd2_B          249 HGNNYSHKVDIFSLGLILFELLYSFSTQMER---VRIITDVRNL---KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATD  322 (332)
T ss_dssp             HCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---HHHHHHHHTT---CCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHH
T ss_pred             cCCCCcchhhHHHHHHHHHHHHHcCCChhHH---HHHHHHhhcc---CCCcccccCChhHHHHHHHHccCCCCcCCCHHH
Confidence            9889999999999999999999875553211   1111111111   122233456678899999999999999999999


Q ss_pred             HHH
Q 043958          152 VAK  154 (163)
Q Consensus       152 i~~  154 (163)
                      +++
T Consensus       323 ~l~  325 (332)
T 3qd2_B          323 IIE  325 (332)
T ss_dssp             HHH
T ss_pred             Hhh
Confidence            986

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=3.1e-33  Score=205.25  Aligned_cols=147  Identities=17%  Similarity=0.230  Sum_probs=108.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC---CeEECccccccccCCCCCcccccCccccccccCcccccc---CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~   75 (163)
                      |++.||+|||   +.+++||||||+||+++.++   .+||+|||+++........   ....|++.|+|||.+.+   ..
T Consensus       247 qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~  320 (419)
T 3i6u_A          247 QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAG  320 (419)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CT
T ss_pred             HHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccc---cccCCCCCccCceeeecCCCCC
Confidence            7899999999   89999999999999996544   5999999999776543222   23468999999999863   56


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++|+||+|+++++++++..||........+...................+..+.+++.+||+.||++|||+.++++
T Consensus       321 ~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          321 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             THHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            7889999999999999999988876544333333333333332223333456788999999999999999999999986

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=1.5e-33  Score=202.86  Aligned_cols=143  Identities=17%  Similarity=0.253  Sum_probs=112.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +.+++||||||+|||++.++.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       132 qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  206 (353)
T 3txo_A          132 EIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVD  206 (353)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-----------CCGGGCCHHHHHHHHCTTHHH
T ss_pred             HHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccCCcc--ccccCCCcCeEChhhcCCCCcCCccC
Confidence            7899999999   899999999999999999999999999999754333222  12346899999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH------HHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM------IDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~------~~i~~  154 (163)
                      +||+|++++++++|..||.. ....++...+.......+    ...+..+.+++.+||..||++||++      .++++
T Consensus       207 iwslG~il~ell~G~~Pf~~-~~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          207 WWAMGVLLYEMLCGHAPFEA-ENEDDLFEAILNDEVVYP----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CCcchHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            99999999999999888754 444555555555543322    2345789999999999999999998      66654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=6.5e-33  Score=196.42  Aligned_cols=147  Identities=16%  Similarity=0.145  Sum_probs=109.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++...........  ...++..|+|||.+.+ ..++.++
T Consensus       127 qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~  201 (311)
T 3niz_A          127 QLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT--HEVVTLWYRAPDVLMGSKKYSTSV  201 (311)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----CCCCCCTTCCHHHHTTCCSCCTHH
T ss_pred             HHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccccc--CCcccCCcCCHHHhcCCCCCCchH
Confidence            7899999999   89999999999999999999999999999987654332221  3357899999999876 4589999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhccc--------------------------chhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ--------------------------SSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..||......+. +..+......+.                          .......++++.+|
T Consensus       202 DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  280 (311)
T 3niz_A          202 DIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDL  280 (311)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHH
T ss_pred             HhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHH
Confidence            999999999999999888754332221 111111000000                          00111234678999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.||++|||+.++++
T Consensus       281 i~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          281 LSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999987

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.97  E-value=8.9e-33  Score=201.28  Aligned_cols=139  Identities=18%  Similarity=0.270  Sum_probs=109.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       161 qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~--~~~~~gt~~Y~aPE~l~~~~~~~~~D  235 (396)
T 4dc2_A          161 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVD  235 (396)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC--BCCCCBCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCc--cccccCCcccCCchhhcCCCCChHHH
Confidence            7899999999   899999999999999999999999999999753332222  22456999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccc--------hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT--------FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|++++++++|..||.....        ...+...+.......    +...+..+.+++.+||+.||++||++
T Consensus       236 iwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          236 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI----PRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCC----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             HHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCC----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            99999999999999988753211        111222223322222    22356789999999999999999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.97  E-value=3.3e-33  Score=197.67  Aligned_cols=154  Identities=19%  Similarity=0.232  Sum_probs=109.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++........... ....++..|+|||.+.+..++.++|
T Consensus       142 qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~D  217 (309)
T 2h34_A          142 QIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQL-GNTVGTLYYMAPERFSESHATYRAD  217 (309)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-----------------CCGGGCCGGGTCC----CCCH
T ss_pred             HHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccc-cccCCCcCccCHHHHcCCCCCchHh
Confidence            7899999999   89999999999999999999999999999876654332211 1345888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-CHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-TMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-t~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..||.... .. .+..................+..+.+++.+||+.||++|| |++++++.|+++.
T Consensus       218 i~slG~il~~l~~g~~pf~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          218 IYALTCVLYECLTGSPPYQGDQ-LS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             HHHHHHHHHHHHHSSCSSCSCH-HH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHCCCCCCCch-HH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            9999999999999988875432 22 1122222211111222334567899999999999999999 9999999999875


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       296 ~  296 (309)
T 2h34_A          296 A  296 (309)
T ss_dssp             C
T ss_pred             H
Confidence            4

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=1e-33  Score=201.73  Aligned_cols=148  Identities=18%  Similarity=0.316  Sum_probs=100.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC---CeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.++   .++|+|||++...........  ...++..|+|||.+.+..++.
T Consensus       114 qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~  188 (325)
T 3kn6_A          114 KLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK--TPCFTLHYAAPELLNQNGYDE  188 (325)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------------------------CCCCH
T ss_pred             HHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCccc--ccCCCcCccCHHHhcCCCCCC
Confidence            7899999999   89999999999999997665   799999999976654332221  335789999999999889999


Q ss_pred             ccceeecchhhHHHhhhccccccccc------hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNT------FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                      ++|+||+|+++++++++..||.....      ..++...+..+............++.+.+++.+||+.||++|||+.++
T Consensus       189 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~el  268 (325)
T 3kn6_A          189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGL  268 (325)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTS
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHH
Confidence            99999999999999999888764322      223444444444444444445677899999999999999999999988


Q ss_pred             HH
Q 043958          153 AK  154 (163)
Q Consensus       153 ~~  154 (163)
                      ++
T Consensus       269 l~  270 (325)
T 3kn6_A          269 RY  270 (325)
T ss_dssp             TT
T ss_pred             hc
Confidence            64

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=7e-33  Score=200.17  Aligned_cols=146  Identities=20%  Similarity=0.285  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc------CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT------GD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~   75 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++..........   ...|++.|+|||.+.+      ..
T Consensus       208 qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~  281 (365)
T 2y7j_A          208 SLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPG  281 (365)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHTTCTTSCC
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccc---cCCCCCCccChhhccccccccCcC
Confidence            7899999999   8999999999999999999999999999997765443222   3468999999998863      35


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++|+||+|+++++++++..||.... .......+.........+.....+..+.+++.+||+.||++|||+.++++
T Consensus       282 ~~~~~Di~slG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          282 YGKEVDLWACGVILFTLLAGSPPFWHRR-QILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             BCTTHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCchhhHHhHHHHHHHHHHCCCCCCCCC-HHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            7889999999999999999988876433 23333333333333333333455678999999999999999999999986

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.97  E-value=2.3e-33  Score=195.88  Aligned_cols=146  Identities=21%  Similarity=0.339  Sum_probs=116.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++..........   ...++..|+|||.+.+..++.++|
T Consensus       130 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~D  203 (284)
T 2a19_B          130 QITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRT---RSKGTLRYMSPEQISSQDYGKEVD  203 (284)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCC---CCCSCCTTSCHHHHHCSCCCTHHH
T ss_pred             HHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcchhheecccccccc---ccCCcccccChhhhccCCCcchhh
Confidence            7899999999   8999999999999999999999999999997765543222   335889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +||+|+++++++++..++......   ........  .    ....+..+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       204 i~slG~il~~l~~~~~~~~~~~~~---~~~~~~~~--~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~  274 (284)
T 2a19_B          204 LYALGLILAELLHVCDTAFETSKF---FTDLRDGI--I----SDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKK  274 (284)
T ss_dssp             HHHHHHHHHHHHSCCSSHHHHHHH---HHHHHTTC--C----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHhcCCcchhHHHH---HHHhhccc--c----cccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhh
Confidence            999999999999998876533221   11111111  1    12234678999999999999999999999999998765


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       275 ~  275 (284)
T 2a19_B          275 S  275 (284)
T ss_dssp             -
T ss_pred             C
Confidence            4

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=4.6e-33  Score=202.93  Aligned_cols=147  Identities=20%  Similarity=0.257  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++ .++.+||+|||+++.........   ...+++.|+|||.+.+. .++.+
T Consensus       149 qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~  222 (394)
T 4e7w_A          149 QLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV---SYICSRYYRAPELIFGATNYTTN  222 (394)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC---SSCSCGGGCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCc---ccccCcCccCHHHHcCCCCCCcH
Confidence            7899999999   89999999999999998 79999999999998765443322   33688999999998765 48999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhh------------------hcc-c-----chhhHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE------------------LCI-Q-----SSEKDKQVQAFVELA  135 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~-~-----~~~~~~~~~~~~~li  135 (163)
                      +||||+||+++++++|..||......+.+........                  ... .     .......++++.+|+
T Consensus       223 ~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  302 (394)
T 4e7w_A          223 IDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLI  302 (394)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHH
Confidence            9999999999999999988765443332221111000                  000 0     000112457899999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||++|||+.++++
T Consensus       303 ~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          303 SRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HHHCCSSGGGSCCHHHHHT
T ss_pred             HHHhCCChhhCCCHHHHhc
Confidence            9999999999999999986

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.97  E-value=3.9e-33  Score=197.19  Aligned_cols=153  Identities=17%  Similarity=0.250  Sum_probs=110.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       144 qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  218 (310)
T 2wqm_A          144 QLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA--HSLVGTPYYMSPERIHENGYNFKSD  218 (310)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC--------------------CCSSCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccc--cccCCCeeEeChHHhCCCCCCchhh
Confidence            7899999999   8999999999999999999999999999987654432221  1335888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccc-hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT-FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      +||+|+++++++++..|+..... .............  ........+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       219 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          219 IWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY--PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             HHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS--CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC--CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            99999999999999988764322 1222222222221  11112345678999999999999999999999999999986


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      .
T Consensus       297 ~  297 (310)
T 2wqm_A          297 A  297 (310)
T ss_dssp             H
T ss_pred             H
Confidence            5

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=1.2e-32  Score=199.28  Aligned_cols=146  Identities=18%  Similarity=0.207  Sum_probs=104.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++.........   ....++..|+|||.+.+..++.++|
T Consensus       135 qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~D  208 (371)
T 2xrw_A          135 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM---TPYVVTRYYRAPEVILGMGYKENVD  208 (371)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeeccccccccccc---CCceecCCccCHHHhcCCCCCchHh
Confidence            7899999999   899999999999999999999999999999765433221   1346889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhh----------------------h----------------hcccchh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE----------------------E----------------LCIQSSE  123 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------------------~----------------~~~~~~~  123 (163)
                      |||+|+++++++++..||........ +..+...                      .                .......
T Consensus       209 iwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (371)
T 2xrw_A          209 IWSVGCIMGEMIKGGVLFPGTDHIDQ-WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEH  287 (371)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccc
Confidence            99999999999999888765432211 1111000                      0                0000111


Q ss_pred             hHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          124 KDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       124 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ....+..+.+|+.+||..||++|||+.++++
T Consensus       288 ~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          288 NKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            2334678999999999999999999999987

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.97  E-value=3.1e-33  Score=199.23  Aligned_cols=146  Identities=17%  Similarity=0.192  Sum_probs=113.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.   ++.++|+|||++..........   ...+++.|+|||.+.+..++.
T Consensus       139 ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~  212 (327)
T 3lm5_A          139 QILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELR---EIMGTPEYLAPEILNYDPITT  212 (327)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCT
T ss_pred             HHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccc---cccCCcCccCCeeecCCCCCc
Confidence            7899999999   899999999999999987   7899999999998765433222   346899999999999889999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+..... .+....+...............+..+.+++.+||+.||++|||+.++++
T Consensus       213 ~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          213 ATDMWNIGIIAYMLLTHTSPFVGEDN-QETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCc-hHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            99999999999999999888764433 2333333333222333333456778999999999999999999999876

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=7e-33  Score=204.83  Aligned_cols=143  Identities=18%  Similarity=0.304  Sum_probs=114.2

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   + ++++||||||+|||++.++.+||+|||+++.........  ....||+.|+|||.+.+..++.++
T Consensus       256 qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~  330 (446)
T 4ejn_A          256 EIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM--KTFCGTPEYLAPEVLEDNDYGRAV  330 (446)
T ss_dssp             HHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-------CCSSSCGGGCCHHHHHTSCCCTHH
T ss_pred             HHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCccc--ccccCCccccCHhhcCCCCCCCcc
Confidence            7899999999   7 899999999999999999999999999997644332221  234689999999999988999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      |+||+|+++++++++..||... ...++...+.......+    ...++.+.+++.+||+.||.+||     |+.++++
T Consensus       331 DiwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          331 DWWGLGVVMYEMMCGRLPFYNQ-DHEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             chhhhHHHHHHHhhCCCCCCCC-CHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            9999999999999998887643 33444444444332222    23457899999999999999999     9999875

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=2.8e-33  Score=198.77  Aligned_cols=155  Identities=22%  Similarity=0.292  Sum_probs=118.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++
T Consensus       142 ~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  218 (318)
T 3lxp_A          142 QICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYAS  218 (318)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHH
Confidence            7899999999   8999999999999999999999999999998776543321 12234577789999999988899999


Q ss_pred             ceeecchhhHHHhhhccccccccchh-h------------ccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFD-E------------IVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP  147 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  147 (163)
                      |+||+|+++++++++..|+....... .            .+.......  ........++..+.+++.+||+.||++||
T Consensus       219 Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  296 (318)
T 3lxp_A          219 DVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG--ERLPRPDKCPAEVYHLMKNCWETEASFRP  296 (318)
T ss_dssp             HHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc--cCCCCCccccHHHHHHHHHHcCCCcccCc
Confidence            99999999999999988765322110 0            000011111  11222334567899999999999999999


Q ss_pred             CHHHHHHHHHHHhh
Q 043958          148 TMIDVAKQLRQAYR  161 (163)
Q Consensus       148 t~~~i~~~L~~~~~  161 (163)
                      |+.++++.|+.+.+
T Consensus       297 s~~ell~~L~~l~~  310 (318)
T 3lxp_A          297 TFENLIPILKTVHE  310 (318)
T ss_dssp             CHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHH
Confidence            99999999998864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=1.1e-32  Score=205.74  Aligned_cols=145  Identities=21%  Similarity=0.281  Sum_probs=118.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC---CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||+++   .++.+||+|||++..........   ...||+.|+|||.+.+ .++.
T Consensus       129 qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~  201 (486)
T 3mwu_A          129 QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK---DRIGTAYYIAPEVLRG-TYDE  201 (486)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-------CCTTGGGGCCGGGGGS-CCCH
T ss_pred             HHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccC---CCcCCCCCCCHHHhCC-CCCc
Confidence            7899999999   89999999999999994   55679999999997665443222   3468999999998875 6899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++++++++..||... ...+++..+.........+.....+..+++++.+||..+|++|||+.++++
T Consensus       202 ~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          202 KCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999998887643 444555555555555555555667889999999999999999999999987

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.97  E-value=1.4e-33  Score=200.95  Aligned_cols=154  Identities=20%  Similarity=0.277  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++
T Consensus       135 qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  211 (327)
T 3lxl_A          135 QICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQS  211 (327)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHH
Confidence            7899999999   8999999999999999999999999999998775543322 22234577889999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccch--------------hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTF--------------DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      ||||+|+++++++++..|+......              ..+... ....  ........+++.+.+++.+||+.||++|
T Consensus       212 Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~li~~~l~~dP~~R  288 (327)
T 3lxl_A          212 DVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL-LEEG--QRLPAPPACPAEVHELMKLCWAPSPQDR  288 (327)
T ss_dssp             HHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH-HHTT--CCCCCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             hHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH-hhcc--cCCCCCCcccHHHHHHHHHHcCCChhhC
Confidence            9999999999999998887532211              011111 1111  1112233456789999999999999999


Q ss_pred             CCHHHHHHHHHHHhh
Q 043958          147 PTMIDVAKQLRQAYR  161 (163)
Q Consensus       147 pt~~~i~~~L~~~~~  161 (163)
                      ||+.++++.|+.+..
T Consensus       289 ps~~ell~~L~~~~~  303 (327)
T 3lxl_A          289 PSFSALGPQLDMLWS  303 (327)
T ss_dssp             CCHHHHHHHHHHC--
T ss_pred             cCHHHHHHHHHHHHh
Confidence            999999999998765

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.97  E-value=1.7e-33  Score=200.44  Aligned_cols=154  Identities=18%  Similarity=0.226  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||+++.   +..++|+|||++................++..|+|||.+.+..++.
T Consensus       148 qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  224 (327)
T 2yfx_A          148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTS  224 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCH
T ss_pred             HHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCc
Confidence            7899999999   899999999999999984   4469999999997654433322222345788999999998888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      ++|+||+|+++++++++..+++......+..........   ......++..+.+++.+||+.||.+|||+.++++.|+.
T Consensus       225 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          225 KTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGR---MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            999999999999999844444444444444433333221   11122456789999999999999999999999999988


Q ss_pred             Hhh
Q 043958          159 AYR  161 (163)
Q Consensus       159 ~~~  161 (163)
                      +..
T Consensus       302 ~~~  304 (327)
T 2yfx_A          302 CTQ  304 (327)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            754

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=8.3e-34  Score=198.72  Aligned_cols=147  Identities=15%  Similarity=0.234  Sum_probs=114.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC--------eEECccccccccCCCCCcccccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--------AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~--------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.||.|||   +++++||||||+||+++.++.        ++++|||++.......      ...++..|+|||.+.+
T Consensus       121 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~y~aPE~~~~  191 (289)
T 4fvq_A          121 QLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD------ILQERIPWVPPECIEN  191 (289)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH------HHHHTTTTSCHHHHHC
T ss_pred             HHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCcc------ccCCcCcccCHHHhCC
Confidence            7899999999   899999999999999988887        9999999985543221      2347788999999987


Q ss_pred             -CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           74 -GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        74 -~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                       ..++.++||||+|+++++++++..+++............. ......    ...+..+.+++.+||+.||++|||+.++
T Consensus       192 ~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l  266 (289)
T 4fvq_A          192 PKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQLP----APKAAELANLINNCMDYEPDHRPSFRAI  266 (289)
T ss_dssp             GGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCC----CCSSCTTHHHHHHHSCSSGGGSCCHHHH
T ss_pred             CCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhh-ccCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence             6689999999999999999998777665544333222211 111111    1224578999999999999999999999


Q ss_pred             HHHHHHHhhc
Q 043958          153 AKQLRQAYRF  162 (163)
Q Consensus       153 ~~~L~~~~~~  162 (163)
                      ++.|+++..+
T Consensus       267 l~~l~~l~~p  276 (289)
T 4fvq_A          267 IRDLNSLFTP  276 (289)
T ss_dssp             HHHHHTCC--
T ss_pred             HHHHHHhcCC
Confidence            9999988754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=1.5e-32  Score=203.53  Aligned_cols=91  Identities=24%  Similarity=0.312  Sum_probs=74.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-------------------------ccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-------------------------IKD   56 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------~~~   56 (163)
                      ||+.||+|||   +.+|+||||||+|||++.++.+||+|||+++........                         ...
T Consensus       164 qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (458)
T 3rp9_A          164 NLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQL  240 (458)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC-----------------------
T ss_pred             HHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCccccccccccccccccccccc
Confidence            7899999999   899999999999999999999999999999876432211                         111


Q ss_pred             cCccccccccCcccc-ccCCCCcccceeecchhhHHHhhh
Q 043958           57 AIPIGIMGFVATEYV-TTGDYNEKCDVFSFAGDRHWLLNR   95 (163)
Q Consensus        57 ~~~~~~~~~~~PE~~-~~~~~~~~~Dv~s~g~~~~~l~~~   95 (163)
                      ....||+.|+|||.+ .+..++.++||||+||++++|+++
T Consensus       241 ~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg  280 (458)
T 3rp9_A          241 TGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM  280 (458)
T ss_dssp             ----CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred             cCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence            234679999999976 456699999999999999999984

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.97  E-value=8.4e-33  Score=203.52  Aligned_cols=144  Identities=19%  Similarity=0.108  Sum_probs=109.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC--eEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||+|||   +.+++||||||+|||++.++.  +||+|||++........     ...+|+.|+|||.+.+..++.+
T Consensus       208 qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~  279 (429)
T 3kvw_A          208 SILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVY-----TYIQSRFYRAPEVILGARYGMP  279 (429)
T ss_dssp             HHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHHTBCCCTH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceecCCccc-----ccCCCCCccChHHHhCCCCCch
Confidence            7899999999   899999999999999999987  99999999966543322     3468899999999998899999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhh------------------------------------------
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL------------------------------------------  117 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------  117 (163)
                      +||||+||++++++++..||......+ .+..+.....                                          
T Consensus       280 ~DiwSlG~il~elltG~~pf~~~~~~~-~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  358 (429)
T 3kvw_A          280 IDMWSLGCILAELLTGYPLLPGEDEGD-QLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGR  358 (429)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEE
T ss_pred             HHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccc
Confidence            999999999999999987765443222 1111110000                                          


Q ss_pred             --------cccchhh-----HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          118 --------CIQSSEK-----DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       118 --------~~~~~~~-----~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                              .......     ...++.+.+|+.+||+.||++|||+.++++
T Consensus       359 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          359 SRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             CTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                    0000000     012467899999999999999999999986

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=1.9e-32  Score=194.57  Aligned_cols=140  Identities=25%  Similarity=0.362  Sum_probs=114.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++++||||||+||+++.+|.+||+|||++.......     ....||+.|+|||.+.+..++.++|
T Consensus       114 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  185 (318)
T 1fot_A          114 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT-----YTLCGTPDYIAPEVVSTKPYNKSID  185 (318)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB-----CCCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCcc-----ccccCCccccCHhHhcCCCCCcccc
Confidence            7899999999   9999999999999999999999999999997654321     2346899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|+++++++++..||.... ..+....+.......+    ...+.++.+++.+||..||++||     +++++++
T Consensus       186 iwslG~il~ell~g~~pf~~~~-~~~~~~~i~~~~~~~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          186 WWSFGILIYEMLAGYTPFYDSN-TMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             hhhhHHHHHHHHhCCCCCCCCC-HHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            9999999999999988876443 3334444444432222    23457899999999999999999     8888874

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=1.8e-33  Score=199.19  Aligned_cols=154  Identities=18%  Similarity=0.295  Sum_probs=109.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++......... .......|+..|+|||.+.+..++.++
T Consensus       124 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  200 (311)
T 3ork_A          124 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS  200 (311)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHH
T ss_pred             HHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchH
Confidence            7899999999   899999999999999999999999999999766543322 222234689999999999988999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH-HHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID-VAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~-i~~~L~~~  159 (163)
                      ||||+|+++++++++..||...... +...........+........+..+.+++.+||+.||++||+..+ +.+.+.++
T Consensus       201 Di~slG~~l~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          201 DVYSLGCVLYEVLTGEPPFTGDSPV-SVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            9999999999999998887644332 232223332222222222345678999999999999999996555 44555554

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.97  E-value=2.7e-33  Score=215.18  Aligned_cols=152  Identities=20%  Similarity=0.277  Sum_probs=116.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++||||||+||+++.++.+||+|||+++.......... ....+++.|+|||.+.+..++.++|
T Consensus       499 qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~~~D  574 (656)
T 2j0j_A          499 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA-SKGKLPIKWMAPESINFRRFTSASD  574 (656)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceec-cCCCCCcceeCHHHhcCCCCCchhh
Confidence            7899999999   89999999999999999999999999999977654332221 1234667899999998889999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||+|+++|++++ +..|+ ......+....+.....   .+....+++.+.+++.+||+.||++|||+.++++.|+++.
T Consensus       575 iwSlG~il~ellt~g~~Pf-~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          575 VWMFGVCMWEILMHGVKPF-QGVKNNDVIGRIENGER---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHHHHHHHHHHHTTSCCTT-TTCCHHHHHHHHHHTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCC-CCCCHHHHHHHHHcCCC---CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999997 55554 34444444443333321   1122345678999999999999999999999999999886


Q ss_pred             h
Q 043958          161 R  161 (163)
Q Consensus       161 ~  161 (163)
                      +
T Consensus       651 ~  651 (656)
T 2j0j_A          651 E  651 (656)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.97  E-value=4.1e-33  Score=198.70  Aligned_cols=150  Identities=19%  Similarity=0.243  Sum_probs=100.1

Q ss_pred             hHHHHHHHHhcCCCCC--eEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc----------cccCccccccccCcc
Q 043958            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI----------KDAIPIGIMGFVATE   69 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~PE   69 (163)
                      |++.||+|||   +.+  ++||||||+||+++.++.++|+|||++..........          ......+++.|+|||
T Consensus       144 qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE  220 (337)
T 3ll6_A          144 QTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPE  220 (337)
T ss_dssp             HHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------
T ss_pred             HHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChh
Confidence            7899999999   888  9999999999999999999999999997765432211          111335888999999


Q ss_pred             cc---ccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           70 YV---TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        70 ~~---~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      .+   .+..++.++||||+|+++++++++..|+...... ........      .......+..+.+++.+||+.||++|
T Consensus       221 ~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~R  293 (337)
T 3ll6_A          221 IIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-RIVNGKYS------IPPHDTQYTVFHSLIRAMLQVNPEER  293 (337)
T ss_dssp             ---CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------CC------CCTTCCSSGGGHHHHHHHSCSSGGGS
T ss_pred             hhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-HhhcCccc------CCcccccchHHHHHHHHHccCChhhC
Confidence            88   4566888999999999999999998887543222 12211111      11112233568899999999999999


Q ss_pred             CCHHHHHHHHHHHhh
Q 043958          147 PTMIDVAKQLRQAYR  161 (163)
Q Consensus       147 pt~~~i~~~L~~~~~  161 (163)
                      ||+.++++.|+.+.+
T Consensus       294 ps~~e~l~~l~~~~~  308 (337)
T 3ll6_A          294 LSIAEVVHQLQEIAA  308 (337)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHh
Confidence            999999999998864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.97  E-value=1.3e-32  Score=197.98  Aligned_cols=143  Identities=17%  Similarity=0.273  Sum_probs=114.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+++||||||+||+++.+|.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       129 qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  203 (353)
T 2i0e_A          129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVD  203 (353)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBSTHHH
T ss_pred             HHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcc--cccccCCccccChhhhcCCCcCCccc
Confidence            7899999999   899999999999999999999999999999754332221  22446899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||+|++++++++|..||.. ....++...+.......+    ...+.++.+++.+||..||++||+     +.++++
T Consensus       204 iwslG~il~ell~G~~Pf~~-~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          204 WWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             ccchHHHHHHHHcCCCCCCC-CCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            99999999999999888753 344455555555443222    235678999999999999999995     455553

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=8.3e-33  Score=203.07  Aligned_cols=147  Identities=22%  Similarity=0.269  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      ||+.||+|||   +.+|+||||||+|||++.+ +.+||+|||+++.........   ...++..|+|||.+.+. .++.+
T Consensus       164 qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~  237 (420)
T 1j1b_A          164 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSS  237 (420)
T ss_dssp             HHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC---SCCSCTTSCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCce---eeeeCCCcCCHHHHcCCCCCCch
Confidence            7899999999   8999999999999999865 568999999998765433222   34688999999998765 68999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhh----------------hccc---ch-----hhHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE----------------LCIQ---SS-----EKDKQVQAFVELA  135 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~---~~-----~~~~~~~~~~~li  135 (163)
                      +||||+||++++|++|..||......+.+........                +..+   ..     .....++.+.+|+
T Consensus       238 ~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li  317 (420)
T 1j1b_A          238 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALC  317 (420)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHH
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHH
Confidence            9999999999999999888765443332221111000                0000   00     0112357899999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||..||++|||+.++++
T Consensus       318 ~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          318 SRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HHHSCSSGGGSCCHHHHHT
T ss_pred             HHhccCChhHCCCHHHHhC
Confidence            9999999999999999986

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=7.8e-33  Score=197.87  Aligned_cols=136  Identities=21%  Similarity=0.311  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++..........   ...|++.|+|||.+.+..+ +.++
T Consensus       138 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~  211 (335)
T 3dls_A          138 QLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY---TFCGTIEYCAPEVLMGNPYRGPEL  211 (335)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBC---EECSCGGGCCHHHHTTCCBCSHHH
T ss_pred             HHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCcee---ccCCCccccChhhhcCCCCCCCcc
Confidence            7899999999   8999999999999999999999999999998765543322   2358999999999988776 7799


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||+|+++++++++..||....   +.......    .    ....+..+.+++.+||+.||++|||+.++++
T Consensus       212 DiwslG~il~el~~g~~pf~~~~---~~~~~~~~----~----~~~~~~~l~~li~~~L~~dP~~Rps~~ell~  274 (335)
T 3dls_A          212 EMWSLGVTLYTLVFEENPFCELE---ETVEAAIH----P----PYLVSKELMSLVSGLLQPVPERRTTLEKLVT  274 (335)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSGG---GGTTTCCC----C----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cchhHHHHHHHHHhCCCchhhHH---HHHhhccC----C----CcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999998875322   11111111    1    1124567999999999999999999999987

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=9e-33  Score=200.02  Aligned_cols=140  Identities=21%  Similarity=0.302  Sum_probs=112.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.+|.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       147 qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  221 (373)
T 2r5t_A          147 EIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNST--TSTFCGTPEYLAPEVLHKQPYDRTVD  221 (373)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCC--CCSBSCCCCCCCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCc--cccccCCccccCHHHhCCCCCCchhh
Confidence            7899999999   899999999999999999999999999999764332221  22446899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      +||+|+++|++++|..||.. ....++...+........    ...+..+.+++.+||+.||.+||++.+
T Consensus       222 iwslG~il~ell~G~~Pf~~-~~~~~~~~~i~~~~~~~~----~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          222 WWCLGAVLYEMLYGLPPFYS-RNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHHHHHHHHHHHHSSCTTCC-SBHHHHHHHHHHSCCCCC----SSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             hHHHHHHHHHHHcCCCCCCC-CCHHHHHHHHHhcccCCC----CCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            99999999999999888764 344445555544432222    234578999999999999999999753

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=8.9e-33  Score=196.14  Aligned_cols=147  Identities=14%  Similarity=0.170  Sum_probs=110.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||.|||   +.+++||||||+||+++.++.+||+|||++..........  ....++..|+|||.+.+. .++.++
T Consensus       116 qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  190 (317)
T 2pmi_A          116 QLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWYRAPDVLMGSRTYSTSI  190 (317)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCC--CCCCSCCTTCCHHHHTTCCCCCTHH
T ss_pred             HHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccC--CCCcccccccCchHhhCCCCCCcHH
Confidence            7899999999   8999999999999999999999999999997765332221  133588999999998764 589999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhh----------------hc--------------ccchhhHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE----------------LC--------------IQSSEKDKQVQA  130 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------~~--------------~~~~~~~~~~~~  130 (163)
                      |+||+|+++++++++..||...... +.+..+....                +.              .........+..
T Consensus       191 DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (317)
T 2pmi_A          191 DIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGN  269 (317)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHH
Confidence            9999999999999998887543322 1111111000                00              000001124568


Q ss_pred             HHHHHHhccccCcCCCCCHHHHHH
Q 043958          131 FVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       131 ~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+++.+||+.||++|||+.++++
T Consensus       270 l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          270 LMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHCCCCcccCCCHHHHhC
Confidence            999999999999999999999876

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.97  E-value=2.1e-33  Score=201.38  Aligned_cols=148  Identities=20%  Similarity=0.328  Sum_probs=116.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC----CCeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED----HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~----~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      ||+.||+|||   +.+++||||||+||++...    +.+||+|||++..........  ....+|+.|+|||.+.+..++
T Consensus       124 qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~  198 (342)
T 2qr7_A          124 TITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL--MTPCYTANFVAPEVLERQGYD  198 (342)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCB--CCSSCCSSCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCce--eccCCCccccCHHHhcCCCCC
Confidence            7899999999   8999999999999998433    349999999998765433222  234688999999999887789


Q ss_pred             cccceeecchhhHHHhhhccccccc--cchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIEC--NTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++|+||+|++++++++|..||...  ....++...+..+............+..+.+++.+||..||++|||+.++++
T Consensus       199 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          199 AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             CccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999998887642  2344455555554444433344456788999999999999999999999886

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=3.1e-33  Score=195.79  Aligned_cols=150  Identities=21%  Similarity=0.307  Sum_probs=106.1

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccc----ccCCC
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV----TTGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~----~~~~~   76 (163)
                      |++.||+|||   ++ +++||||||+||+++.++.++|+|||++..........   ...+++.|+|||.+    .+..+
T Consensus       117 qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~  190 (290)
T 3fme_A          117 SIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD---IDAGCKPYMAPERINPELNQKGY  190 (290)
T ss_dssp             HHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--C
T ss_pred             HHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccccc---ccCCCccccChhhcChhhcCcCC
Confidence            7899999999   77 99999999999999999999999999997665433222   23588899999996    45568


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH--
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK--  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~--  154 (163)
                      +.++|+||+|+++++++++..|+..................  ........+..+.+++.+||+.||++|||+.++++  
T Consensus       191 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp  268 (290)
T 3fme_A          191 SVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS--PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHP  268 (290)
T ss_dssp             CHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSH
T ss_pred             CcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC--CCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCc
Confidence            89999999999999999999887643333332322222221  11112245678999999999999999999999987  


Q ss_pred             HHHHH
Q 043958          155 QLRQA  159 (163)
Q Consensus       155 ~L~~~  159 (163)
                      +++..
T Consensus       269 ~f~~~  273 (290)
T 3fme_A          269 FFTLH  273 (290)
T ss_dssp             HHHHH
T ss_pred             ccccC
Confidence            55443

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=8.2e-33  Score=192.43  Aligned_cols=148  Identities=22%  Similarity=0.195  Sum_probs=113.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++................++..|+|||.+.+..+ +.++
T Consensus       113 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  189 (276)
T 2yex_A          113 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV  189 (276)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHH
T ss_pred             HHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcc
Confidence            7899999999   89999999999999999999999999999976543332222234568899999999987765 6789


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+.................  .........+..+.+++.+||+.||++|||+.++++
T Consensus       190 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTC--TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcc--cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            999999999999999888764433222221111111  111122345678999999999999999999999876

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=1e-32  Score=196.44  Aligned_cols=147  Identities=18%  Similarity=0.257  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++.++ .++|+|||++..........   ...++..|+|||.+.+ ..++.+
T Consensus       138 qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  211 (330)
T 3nsz_A          138 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN---VRVASRYFKGPELLVDYQMYDYS  211 (330)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCC---SCCSCGGGCCHHHHTTCCCCCTH
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccc---cccccccccChhhhcCCCcCCch
Confidence            7899999999   89999999999999999776 89999999997765443322   3368889999999877 568999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhh-------------hh--------------------cccchhhHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------EL--------------------CIQSSEKDK  126 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~--------------------~~~~~~~~~  126 (163)
                      +||||+|+++++++++..|+.......+.+......             ..                    .........
T Consensus       212 ~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (330)
T 3nsz_A          212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL  291 (330)
T ss_dssp             HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGG
T ss_pred             hhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcccccccc
Confidence            999999999999999999886543322211111100             00                    000111122


Q ss_pred             HHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          127 QVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       127 ~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+..+.+|+.+||+.||++|||+.++++
T Consensus       292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          292 VSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            4678999999999999999999999987

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.97  E-value=5.1e-33  Score=199.51  Aligned_cols=142  Identities=23%  Similarity=0.305  Sum_probs=114.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+||+++.+|.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       126 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  200 (345)
T 1xjd_A          126 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK--TNTFCGTPDYIAPEILLGQKYNHSVD  200 (345)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCc--ccCCCCCcccCChhhhcCCCCCChhh
Confidence            7899999999   899999999999999999999999999999754332222  22446899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH-HHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI-DVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-~i~  153 (163)
                      +||+|++++++++|..||.. ....++...+.......    ....+..+.+++.+||..||++||++. +++
T Consensus       201 iwslG~il~ell~g~~Pf~~-~~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          201 WWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMDNPFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             hHHHHHHHHHHhcCCCCCCC-CCHHHHHHHHHhCCCCC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            99999999999999888754 33444554444443222    123567899999999999999999986 554

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=6.5e-33  Score=203.26  Aligned_cols=135  Identities=17%  Similarity=0.139  Sum_probs=107.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccc----------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV----------   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~----------   71 (163)
                      |++.||+|||   +++|+||||||+|||++.++.+||+|||+++.....     .....| +.|+|||.+          
T Consensus       219 qi~~aL~~LH---~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~  289 (413)
T 3dzo_A          219 QVIRLLASLH---HYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQH  289 (413)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred             HHHHHHHHHH---hCCcccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccc
Confidence            7899999999   899999999999999999999999999998765433     123356 899999999          


Q ss_pred             ccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           72 TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        72 ~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      .+..++.++||||+|+++|+++++..||.... ..+.........        ...++.+.+++.+||+.||++|||+.+
T Consensus       290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~-~~~~~~~~~~~~--------~~~~~~~~~li~~~l~~dP~~Rpt~~~  360 (413)
T 3dzo_A          290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDA-ALGGSEWIFRSC--------KNIPQPVRALLEGFLRYPKEDRLLPLQ  360 (413)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTG-GGSCSGGGGSSC--------CCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcc-hhhhHHHHHhhc--------ccCCHHHHHHHHHHccCChhhCcCHHH
Confidence            44458889999999999999999988875432 223333332211        123467999999999999999999877


Q ss_pred             HHH
Q 043958          152 VAK  154 (163)
Q Consensus       152 i~~  154 (163)
                      +++
T Consensus       361 ~l~  363 (413)
T 3dzo_A          361 AME  363 (413)
T ss_dssp             HTT
T ss_pred             HHh
Confidence            754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.97  E-value=1.6e-32  Score=197.25  Aligned_cols=140  Identities=14%  Similarity=0.216  Sum_probs=115.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+++||||||+||+++.++.++|+|||+++......     ....||+.|+|||.+.+..++.++|
T Consensus       149 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~D  220 (350)
T 1rdq_E          149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc-----ccccCCccccCHHHhcCCCCCCcCC
Confidence            7899999999   8999999999999999999999999999997664332     2346899999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||+|+++++++++..||... ...++...+.......+    ...+..+.+++.+||+.||++||+     ++++++
T Consensus       221 iwslG~il~ell~g~~Pf~~~-~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          221 WWALGVLIYEMAAGYPPFFAD-QPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCC----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             EecccHhHhHHhhCCCCCCCC-CHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            999999999999998887643 34445555444433222    235678999999999999999998     777764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=6.2e-33  Score=199.31  Aligned_cols=141  Identities=24%  Similarity=0.359  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc---cCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++.......      ...|++.|+|||.+.   .+.++.
T Consensus       162 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~  232 (348)
T 1u5q_A          162 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDG  232 (348)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC------CCCSCGGGCCHHHHHTTSSCCBCT
T ss_pred             HHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCC------cccCCcceeCHhhhccccCCCCCc
Confidence            7899999999   8999999999999999999999999999997654322      346889999999884   467899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++++++++..|+........+ ........  ........+..+.+++.+||+.+|++|||+.++++
T Consensus       233 ~~DiwslG~il~ell~g~~p~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          233 KVDVWSLGITCIELAERKPPLFNMNAMSAL-YHIAQNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCChHHHH-HHHHhcCC--CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            999999999999999999887654433322 22222211  11112234678999999999999999999999976

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=4.2e-33  Score=207.80  Aligned_cols=145  Identities=21%  Similarity=0.305  Sum_probs=120.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||++   +.++.+||+|||++..........   ...||+.|+|||.+.+ .++.
T Consensus       134 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~-~~~~  206 (484)
T 3nyv_A          134 QVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK---DKIGTAYYIAPEVLHG-TYDE  206 (484)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHH---HHTTGGGTCCHHHHHT-CCCT
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccc---cCCCCccccCceeecC-CCCC
Confidence            7899999999   8999999999999999   567899999999998776544322   2358999999998865 6899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++|+++++..||... ...+++..+.........+.....++.+++++.+||+.+|++|||+.++++
T Consensus       207 ~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          207 KCDVWSTGVILYILLSGCPPFNGA-NEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cceeHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            999999999999999998887543 444455555555555555555667889999999999999999999999986

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=2.6e-32  Score=210.28  Aligned_cols=143  Identities=17%  Similarity=0.276  Sum_probs=116.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       450 qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~~~~~D  524 (674)
T 3pfq_A          450 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKTFCGTPDYIAPEIIAYQPYGKSVD  524 (674)
T ss_dssp             HHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCC--BCCCCSCSSSCCHHHHTCCCBSTHHH
T ss_pred             HHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcc--cccccCCCcccCHhhhcCCCCCccce
Confidence            7899999999   899999999999999999999999999999764433222  22456999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH-----HHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM-----IDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~-----~~i~~  154 (163)
                      +||+|+++|+|++|..||.. ....++...+.......+    ...+.++.+|+.+||+.||++||++     +++++
T Consensus       525 vwSlGvilyelltG~~Pf~~-~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          525 WWAFGVLLYEMLAGQAPFEG-EDEDELFQSIMEHNVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHSSCCCCC----TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             EechHHHHHHHHcCCCCCCC-CCHHHHHHHHHhCCCCCC----ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence            99999999999999888764 344555555555543332    2356789999999999999999997     55553

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=3.5e-32  Score=189.75  Aligned_cols=141  Identities=22%  Similarity=0.334  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++.........    ...++..|+|||.+.+..++.++|
T Consensus       117 qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~D  189 (279)
T 3fdn_A          117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----DLCGTLDYLPPEMIEGRMHDEKVD  189 (279)
T ss_dssp             HHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccccc----ccCCCCCccCHhHhccCCCCccch
Confidence            7899999999   899999999999999999999999999988554433221    335888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.. ....+............    ....+..+.+++.+||+.+|++|||+.++++
T Consensus       190 i~slG~il~~l~~g~~p~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          190 LWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTF----PDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             HHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHHTCCCC----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             hHhHHHHHHHHHHCCCCCCC-CcHHHHHHHHHhCCCCC----CCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            99999999999999888753 33333333333322211    2234578999999999999999999999997

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=2.1e-32  Score=195.69  Aligned_cols=161  Identities=17%  Similarity=0.218  Sum_probs=117.9

Q ss_pred             hHHHHHHHHhcCC-----CCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~-----~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~   74 (163)
                      |++.||+|||...     +.+++||||||+||+++.++.++|+|||++..........  ......++..|+|||.+.+.
T Consensus       147 ~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  226 (342)
T 1b6c_B          147 STASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  226 (342)
T ss_dssp             HHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSC
T ss_pred             HHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhccc
Confidence            7899999999311     3689999999999999999999999999997765443221  12244689999999998765


Q ss_pred             C------CCcccceeecchhhHHHhhh----------ccccccccc----hhhccchhhhhhhcccch---hhHHHHHHH
Q 043958           75 D------YNEKCDVFSFAGDRHWLLNR----------VKKHIECNT----FDEIVDPVIREELCIQSS---EKDKQVQAF  131 (163)
Q Consensus        75 ~------~~~~~Dv~s~g~~~~~l~~~----------~~~~~~~~~----~~~~~~~~~~~~~~~~~~---~~~~~~~~~  131 (163)
                      .      ++.++||||+|+++++++++          ..|+.....    ...+..........+..+   ....++..+
T Consensus       227 ~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  306 (342)
T 1b6c_B          227 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM  306 (342)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHH
T ss_pred             ccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHH
Confidence            2      33689999999999999998          445443221    111222221221111111   234677889


Q ss_pred             HHHHHhccccCcCCCCCHHHHHHHHHHHhhc
Q 043958          132 VELAVKCVSESAEDRPTMIDVAKQLRQAYRF  162 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~~  162 (163)
                      .+++.+||+.||++|||+.++++.|+++.+.
T Consensus       307 ~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          307 AKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998753

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.97  E-value=4.8e-32  Score=196.76  Aligned_cols=143  Identities=23%  Similarity=0.306  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc---CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||+++.+|.++|+|||++.........   ....||+.|+|||.+.+   ..++.
T Consensus       123 qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~---~~~~gt~~Y~aPE~~~~~~~~~~~~  196 (384)
T 4fr4_A          123 ELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQI---TTMAGTKPYMAPEMFSSRKGAGYSF  196 (384)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCB---CCCCSCGGGCCGGGTCCCSSCCBCT
T ss_pred             HHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCce---eccCCCccccCCeeeccCCCCCCCc
Confidence            7899999999   899999999999999999999999999999876543322   23469999999999864   45889


Q ss_pred             ccceeecchhhHHHhhhcccccccc--chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-HHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECN--TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-MIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-~~~i~~  154 (163)
                      ++|+||+|+++|++++|..||....  ...++.........    ..+...+..+.+++.+||+.||++||+ ++++.+
T Consensus       197 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          197 AVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             cceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhccc----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            9999999999999999998876322  22222222222221    122345678999999999999999998 666653

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=1.5e-32  Score=191.28  Aligned_cols=151  Identities=19%  Similarity=0.247  Sum_probs=118.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.+++|+||||+||++   +.++.++++|||++..........   ...+++.|+|||.+.+ .++.
T Consensus       114 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~-~~~~  186 (277)
T 3f3z_A          114 DVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMR---TKVGTPYYVSPQVLEG-LYGP  186 (277)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBC---CCCSCTTTCCHHHHTT-CBCT
T ss_pred             HHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchh---ccCCCCCccChHHhcc-cCCc
Confidence            7899999999   8999999999999999   888999999999997765443222   3368899999998764 4899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH--HH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK--QL  156 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~--~L  156 (163)
                      ++|+||+|+++++++++..|+... ...+....................++.+.+++.+||+.||++|||+.++++  ++
T Consensus       187 ~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~  265 (277)
T 3f3z_A          187 ECDEWSAGVMMYVLLCGYPPFSAP-TDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF  265 (277)
T ss_dssp             THHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             hhhehhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence            999999999999999998887543 333344444444333333333356788999999999999999999999986  55


Q ss_pred             HHHh
Q 043958          157 RQAY  160 (163)
Q Consensus       157 ~~~~  160 (163)
                      ++..
T Consensus       266 ~~~~  269 (277)
T 3f3z_A          266 EKQL  269 (277)
T ss_dssp             HHHH
T ss_pred             hccc
Confidence            5443

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=4.8e-33  Score=195.00  Aligned_cols=147  Identities=17%  Similarity=0.208  Sum_probs=107.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +++++||||||+||+++.++.+||+|||++..........  ....++..|+|||.+.+. .++.++
T Consensus       108 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  182 (288)
T 1ob3_A          108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSKKYSTTI  182 (288)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccccc--ccccccccccCchheeCCCCCCcHH
Confidence            7899999999   8999999999999999999999999999997664332221  123578899999998764 589999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh--------------------hhc-----ccchhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE--------------------ELC-----IQSSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~-----~~~~~~~~~~~~~~~li  135 (163)
                      |+||+|+++++++++..||........+ ......                    ...     .........++.+.+++
T Consensus       183 DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  261 (288)
T 1ob3_A          183 DIWSVGCIFAEMVNGTPLFPGVSEADQL-MRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLL  261 (288)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHH
Confidence            9999999999999998887643322211 111100                    000     00001123457889999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||++|||+.++++
T Consensus       262 ~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          262 SKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             HHHTCSSTTTSCCHHHHHT
T ss_pred             HHHcCCCcccCCCHHHHhc
Confidence            9999999999999999876

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.1e-32  Score=197.78  Aligned_cols=144  Identities=18%  Similarity=0.217  Sum_probs=111.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||+++......     ....+|..|+|||.+.+ ..++.++
T Consensus       136 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  207 (367)
T 1cm8_A          136 QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM-----TGYVVTRWYRAPEVILNWMRYTQTV  207 (367)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSC-----CSSCSCGGGCCTHHHHTTTCCCTTH
T ss_pred             HHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeeccccccccc-----CcCcCCCCcCCHHHHhCCCCCChhh
Confidence            7899999999   8999999999999999999999999999997764332     13468899999999877 6789999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhccc---------------------------chhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ---------------------------SSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~  133 (163)
                      |+||+||++++++++..||......+. +..+......+.                           .......++.+.+
T Consensus       208 DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (367)
T 1cm8_A          208 DIWSVGCIMAEMITGKTLFKGSDHLDQ-LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVN  286 (367)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHH
Confidence            999999999999999888765443221 111111000000                           0011234678999


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+.+||..||++|||+.++++
T Consensus       287 ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          287 LLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHccCChhHCCCHHHHhc
Confidence            999999999999999999987

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=2.7e-32  Score=191.22  Aligned_cols=143  Identities=22%  Similarity=0.324  Sum_probs=112.1

Q ss_pred             hHHHHHHHHhcCCCCC--eEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+  ++|+||||+||+++ .++.++|+|||++.........    ...++..|+|||.+. +.++.
T Consensus       137 qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~t~~y~aPE~~~-~~~~~  208 (290)
T 1t4h_A          137 QILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK----AVIGTPEFMAPEMYE-EKYDE  208 (290)
T ss_dssp             HHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBE----ESCSSCCCCCGGGGG-TCCCT
T ss_pred             HHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccc----cccCCcCcCCHHHHh-ccCCC
Confidence            7899999999   788  99999999999997 8899999999999655433222    235889999999876 56899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+..................  ........++.+.+++.+||+.||++|||+.++++
T Consensus       209 ~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          209 SVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC--ccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            999999999999999999888654544444333332211  11222234467999999999999999999999986

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=6.3e-33  Score=204.32  Aligned_cols=148  Identities=18%  Similarity=0.247  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.......... ....||+.|+|||.+.     .+.+
T Consensus       183 qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~-~~~~GT~~Y~APE~l~~~~~~~~~~  258 (437)
T 4aw2_A          183 EMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS-SVAVGTPDYISPEILQAMEGGKGRY  258 (437)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC-CSCCSCGGGCCHHHHHHHHTSCCEE
T ss_pred             HHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccc-ccccCCcCeeChHHHhhcccCCCCC
Confidence            7899999999   89999999999999999999999999999977655443322 2346999999999987     4568


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchh-hHHHHHHHHHHHHhccccCcCC--CCCHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSE-KDKQVQAFVELAVKCVSESAED--RPTMIDVA  153 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~--Rpt~~~i~  153 (163)
                      +.++|+||+|+++++|++|..||... ...+....+.........+. ....++.+++|+.+||..+|++  |+++++++
T Consensus       259 ~~~~DvwSlGvil~elltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil  337 (437)
T 4aw2_A          259 GPECDWWSLGVCMYEMLYGETPFYAE-SLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFK  337 (437)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHH
T ss_pred             CCcCeeHHHHHHHHHHHhCCCCCCCC-ChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHh
Confidence            99999999999999999998887643 33444444443322222221 1235678999999999888888  99999987


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      +
T Consensus       338 ~  338 (437)
T 4aw2_A          338 K  338 (437)
T ss_dssp             T
T ss_pred             C
Confidence            6

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=2.7e-32  Score=190.55  Aligned_cols=152  Identities=18%  Similarity=0.230  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC----CeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      |++.||.|||   +.+++|+||||+||+++.++    .++++|||++..........   ...++..|+|||.+.+..++
T Consensus       116 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~  189 (283)
T 3bhy_A          116 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK---NIFGTPEFVAPEIVNYEPLG  189 (283)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCC
T ss_pred             HHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCccc---ccCCCcCccCcceecCCCCC
Confidence            7899999999   89999999999999998877    79999999997765433222   23588899999999888899


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH--H
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK--Q  155 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~--~  155 (163)
                      .++|+||+|+++++++++..|+.... ..+....................+..+.+++.+||..||++|||+.++++  +
T Consensus       190 ~~~Di~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~  268 (283)
T 3bhy_A          190 LEADMWSIGVITYILLSGASPFLGET-KQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSW  268 (283)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHH
T ss_pred             cchhhhhHHHHHHHHHHCCCCCCCcc-hHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHH
Confidence            99999999999999999988875433 23333332222222222233345678999999999999999999999997  5


Q ss_pred             HHHHh
Q 043958          156 LRQAY  160 (163)
Q Consensus       156 L~~~~  160 (163)
                      ++.+.
T Consensus       269 ~~~~~  273 (283)
T 3bhy_A          269 IKAIR  273 (283)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            65553

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.97  E-value=2.6e-32  Score=195.85  Aligned_cols=139  Identities=19%  Similarity=0.273  Sum_probs=108.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.+||+|||+++........  .....||+.|+|||.+.+..++.++|
T Consensus       118 qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  192 (345)
T 3a8x_A          118 EISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT--TSTFCGTPNYIAPEILRGEDYGFSVD  192 (345)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCC--BCCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCc--ccccCCCccccCccccCCCCCChHHh
Confidence            7899999999   899999999999999999999999999999764332221  22446899999999999889999999


Q ss_pred             eeecchhhHHHhhhcccccccc--------chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECN--------TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+|+++++++++..||....        ....+...+.......    +...+..+.+++.+||+.||++||++
T Consensus       193 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          193 WWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI----PRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCC----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCC----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            9999999999999988875321        1112222222222211    22356789999999999999999995

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=4.7e-32  Score=201.52  Aligned_cols=142  Identities=19%  Similarity=0.266  Sum_probs=114.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      ||+.||+|||   +.+++||||||+||+++.++.+||+|||++..........   ...|++.|+|||.+.+..+ +.++
T Consensus       124 qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~  197 (476)
T 2y94_A          124 QILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---TSCGSPNYAAPEVISGRLYAGPEV  197 (476)
T ss_dssp             HHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBC---CCCSCSTTCCHHHHTTCCBCSHHH
T ss_pred             HHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccccccc---ccCCCcCeEChhhccCCCCCCCcc
Confidence            7899999999   8999999999999999999999999999998765443222   3468999999999988776 6799


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|++++++++|..||.. .....+...+..+....    ....++.+.+++.+||..||++|||+.++++
T Consensus       198 DiwSlGvil~elltG~~Pf~~-~~~~~~~~~i~~~~~~~----p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          198 DIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIFYT----PQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCC-SSSHHHHHHHHTTCCCC----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             eehhhHHHHHHHhhCCCCCCC-CCHHHHHHHHhcCCcCC----CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            999999999999999888753 33334444444333222    1234568999999999999999999999987

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=2e-32  Score=204.72  Aligned_cols=145  Identities=22%  Similarity=0.340  Sum_probs=118.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +.+++||||||+||+++.   ++.+||+|||++.........   ....||+.|+|||.+. +.++.
T Consensus       144 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~---~~~~gt~~y~aPE~l~-~~~~~  216 (494)
T 3lij_A          144 QVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM---KERLGTAYYIAPEVLR-KKYDE  216 (494)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCB---CCCCSCTTTCCHHHHT-TCBCT
T ss_pred             HHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccc---cccCCCcCeeCHHHHc-ccCCC
Confidence            7899999999   899999999999999976   455999999999776543322   2346899999999876 56999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|+++|+++++..||. .....++...+.........+.....++.+.+++.+||+.+|++|||+.++++
T Consensus       217 ~~DiwslG~il~~ll~g~~pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          217 KCDVWSIGVILFILLAGYPPFG-GQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             chhHHHHHHHHHHHHhCCCCCC-CCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            9999999999999999988775 34445566666665555555555567789999999999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=9.2e-33  Score=191.56  Aligned_cols=147  Identities=21%  Similarity=0.198  Sum_probs=114.6

Q ss_pred             hHHHHHHHHhcCCCCC--eEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc-
Q 043958            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE-   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~-   78 (163)
                      |++.||+|||   +.+  ++|+||||+||+++.++.+++.|||++......       ...+++.|+|||.+.+..++. 
T Consensus       119 qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~  188 (271)
T 3kmu_A          119 DMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP-------GRMYAPAWVAPEALQKKPEDTN  188 (271)
T ss_dssp             HHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCT-------TCBSCGGGSCHHHHHSCGGGSC
T ss_pred             HHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeeccc-------CccCCccccChhhhccCCCCCC
Confidence            7899999999   888  999999999999999999999998886442221       235788999999998765444 


Q ss_pred             --ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           79 --KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        79 --~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                        ++||||+|+++++++++..|+..... .+...........+  ......+..+.+++.+||+.||++|||+.++++.|
T Consensus       189 ~~~~Di~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L  265 (271)
T 3kmu_A          189 RRSADMWSFAVLLWELVTREVPFADLSN-MEIGMKVALEGLRP--TIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL  265 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSCTTTTSCH-HHHHHHHHHSCCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccccCh-HHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence              79999999999999999888754333 22222222222111  22234567899999999999999999999999999


Q ss_pred             HHHhh
Q 043958          157 RQAYR  161 (163)
Q Consensus       157 ~~~~~  161 (163)
                      +++.+
T Consensus       266 ~~l~~  270 (271)
T 3kmu_A          266 EKMQD  270 (271)
T ss_dssp             HHHCC
T ss_pred             HHhhc
Confidence            99864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=2.7e-32  Score=195.97  Aligned_cols=149  Identities=17%  Similarity=0.149  Sum_probs=109.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCcccccc-CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTT-GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~-~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++.........  .......+++.|+|||.+.+ ..++.
T Consensus       132 qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  208 (351)
T 3mi9_A          132 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP  208 (351)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCT
T ss_pred             HHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCc
Confidence            7899999999   899999999999999999999999999999876533222  12223468899999998876 45799


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccc-----------------------hh-----hHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS-----------------------SE-----KDKQVQA  130 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~-----~~~~~~~  130 (163)
                      ++||||+|+++++++++..|+...... .....+.........                       ..     ....++.
T Consensus       209 ~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (351)
T 3mi9_A          209 PIDLWGAGCIMAEMWTRSPIMQGNTEQ-HQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY  287 (351)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHH
T ss_pred             HhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChH
Confidence            999999999999999998876543322 111111100000000                       00     0012467


Q ss_pred             HHHHHHhccccCcCCCCCHHHHHH
Q 043958          131 FVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       131 ~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+|+.+||+.||++|||+.++++
T Consensus       288 ~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          288 ALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHhcCChhhCCCHHHHhC
Confidence            899999999999999999999986

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=1.2e-32  Score=200.31  Aligned_cols=149  Identities=16%  Similarity=0.242  Sum_probs=109.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC-----cccccCccccccccCcccccc--C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET-----HIKDAIPIGIMGFVATEYVTT--G   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~-----~~~~~~~~~~~~~~~PE~~~~--~   74 (163)
                      ||+.||+|||   +.+++||||||+|||++.++.++++|||.+........     ........++..|+|||.+.+  .
T Consensus       136 qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  212 (389)
T 3gni_B          136 GVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQ  212 (389)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSS
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCC
Confidence            7899999999   89999999999999999999999999999865432211     111123468889999999987  5


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhh-------------------------------------
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL-------------------------------------  117 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------  117 (163)
                      .++.++||||+||++++++++..||............ .....                                     
T Consensus       213 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (389)
T 3gni_B          213 GYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK-LNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPR  291 (389)
T ss_dssp             CBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------------
T ss_pred             CCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-hcCCCCccccccccccccccccccccccccccccccccCccc
Confidence            7899999999999999999998887654332222111 11000                                     


Q ss_pred             -----cccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          118 -----CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       118 -----~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                           ....+.....++.+.+|+.+||+.||++|||+.++++
T Consensus       292 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          292 PSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             --------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                 0001122334577999999999999999999999985

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=4.5e-32  Score=193.34  Aligned_cols=143  Identities=21%  Similarity=0.262  Sum_probs=109.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++||||||+||+++.++.+||+|||++..........  ....|++.|+|||.+.+..++.++|
T Consensus       129 qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  203 (327)
T 3a62_A          129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT--HTFCGTIEYMAPEILMRSGHNRAVD  203 (327)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHH
T ss_pred             HHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccc--cccCCCcCccCHhhCcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999987544332211  2346899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      +||+|+++++++++..||... ...+....+.......+    ...+..+.+++.+||..||++||     ++.++++
T Consensus       204 iwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~~~~~p----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          204 WWSLGALMYDMLTGAPPFTGE-NRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHTCCCCC----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             chhHHHHHHHHHHCCCCCCCC-CHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            999999999999998887543 33344444444332221    23457899999999999999999     6777765

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.97  E-value=3.4e-32  Score=197.90  Aligned_cols=145  Identities=18%  Similarity=0.219  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCC----------------------------------------------
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDH----------------------------------------------   34 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~----------------------------------------------   34 (163)
                      ||+.||+|||   ++ +++||||||+|||++.++                                              
T Consensus       154 qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (397)
T 1wak_A          154 QVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNA  230 (397)
T ss_dssp             HHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGG
T ss_pred             HHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccc
Confidence            7899999999   77 999999999999998775                                              


Q ss_pred             ---CeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccceeecchhhHHHhhhccccccccchh-----
Q 043958           35 ---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFD-----  106 (163)
Q Consensus        35 ---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~-----  106 (163)
                         .++|+|||++.......     ....+|..|+|||.+.+..++.++||||+||++++++++..||.......     
T Consensus       231 ~~~~~kl~DfG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~  305 (397)
T 1wak_A          231 EKLKVKIADLGNACWVHKHF-----TEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDE  305 (397)
T ss_dssp             GGCCEEECCGGGCEETTBCS-----CSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHH
T ss_pred             cccceEeccccccccccccC-----ccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchH
Confidence               79999999997765332     13368999999999998889999999999999999999988875422110     


Q ss_pred             hccchhhh--hh------------------------------------hcccchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958          107 EIVDPVIR--EE------------------------------------LCIQSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus       107 ~~~~~~~~--~~------------------------------------~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      ..+.....  +.                                    ...........+..+.+|+.+||+.||++|||
T Consensus       306 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  385 (397)
T 1wak_A          306 DHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRAT  385 (397)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCC
T ss_pred             HHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCC
Confidence            00000000  00                                    00001123456788999999999999999999


Q ss_pred             HHHHHH
Q 043958          149 MIDVAK  154 (163)
Q Consensus       149 ~~~i~~  154 (163)
                      +.++++
T Consensus       386 ~~e~l~  391 (397)
T 1wak_A          386 AAECLR  391 (397)
T ss_dssp             HHHHHT
T ss_pred             HHHHhh
Confidence            999986

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=1.3e-32  Score=201.33  Aligned_cols=147  Identities=17%  Similarity=0.217  Sum_probs=113.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-------cC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-------TG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-------~~   74 (163)
                      ||+.||.|||   +++++||||||+|||++.++.+||+|||+++.......... ....||+.|+|||.+.       ..
T Consensus       170 qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~-~~~~Gt~~Y~APE~l~~~~~~~~~~  245 (412)
T 2vd5_A          170 EIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRS-LVAVGTPDYLSPEILQAVGGGPGTG  245 (412)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEEC-SSCCSCGGGCCHHHHHHHHTCTTCS
T ss_pred             HHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcccc-ceeccccCcCCHHHHhhcccCcCCC
Confidence            7899999999   89999999999999999999999999999987655433222 2346999999999987       34


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccch-hhHHHHHHHHHHHHhccccCcCCC---CCHH
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS-EKDKQVQAFVELAVKCVSESAEDR---PTMI  150 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~R---pt~~  150 (163)
                      .++.++|+||+|+++|++++|..||... ...+....+.........+ .....+.++++++.+||. +|.+|   |+++
T Consensus       246 ~~~~~~DiwSlGvilyelltG~~Pf~~~-~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~  323 (412)
T 2vd5_A          246 SYGPECDWWALGVFAYEMFYGQTPFYAD-STAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAG  323 (412)
T ss_dssp             EECTHHHHHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHH
T ss_pred             CCChHHhhhHHhHHHHHHHhCCCCCCCC-CHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHH
Confidence            6899999999999999999998887643 3334444444322212112 123466889999999999 99988   5888


Q ss_pred             HHHH
Q 043958          151 DVAK  154 (163)
Q Consensus       151 ~i~~  154 (163)
                      ++++
T Consensus       324 ei~~  327 (412)
T 2vd5_A          324 DFRT  327 (412)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            8865

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.7e-32  Score=196.76  Aligned_cols=147  Identities=20%  Similarity=0.165  Sum_probs=110.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+||+|||++..........  ....+++.|+|||.+.+. .++.++
T Consensus       120 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  194 (346)
T 1ua2_A          120 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAY--THQVVTRWYRAPELLFGARMYGVGV  194 (346)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCC--CCSCCCCTTCCHHHHTTCSCCCHHH
T ss_pred             HHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccC--CcccccccccCchHhhCCCCCCchh
Confidence            7899999999   8999999999999999999999999999997765433222  234688999999998764 478899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhccc------------------------chhhHHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ------------------------SSEKDKQVQAFVELAV  136 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~  136 (163)
                      |+||+|+++++++++..++....... .+..+......+.                        .......+..+.+++.
T Consensus       195 DiwslG~il~ell~g~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  273 (346)
T 1ua2_A          195 DMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQ  273 (346)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHH
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHH
Confidence            99999999999999876655433222 2222111100000                        0011234578999999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+.||++|||+.++++
T Consensus       274 ~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          274 GLFLFNPCARITATQALK  291 (346)
T ss_dssp             HHHCSSTTTSCCHHHHHT
T ss_pred             HHhccChhhCCCHHHHhc
Confidence            999999999999999986

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.1e-32  Score=197.85  Aligned_cols=147  Identities=16%  Similarity=0.175  Sum_probs=111.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++ .++.+||+|||+++.........   ...++..|+|||.+.+.. ++.+
T Consensus       149 qi~~aL~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~  222 (383)
T 3eb0_A          149 QLFRAVGFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSV---AYICSRFYRAPELMLGATEYTPS  222 (383)
T ss_dssp             HHHHHHHHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCC---CCCCCSSCCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCc---CcccCCCccCHHHhcCCCCCCcc
Confidence            7899999999   89999999999999997 68899999999998765443322   335788999999987654 8999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhc----------------c--------cchhhHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC----------------I--------QSSEKDKQVQAFVELA  135 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~--------~~~~~~~~~~~~~~li  135 (163)
                      +||||+|+++++++++..||......+.+..........                .        ........+..+.+|+
T Consensus       223 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  302 (383)
T 3eb0_A          223 IDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLL  302 (383)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHH
T ss_pred             hhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHH
Confidence            999999999999999988876544333222111100000                0        0001112456799999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||++|||+.++++
T Consensus       303 ~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          303 EQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHCCSSGGGSCCHHHHHT
T ss_pred             HHHccCChhhCCCHHHHhc
Confidence            9999999999999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=4.4e-32  Score=194.62  Aligned_cols=144  Identities=14%  Similarity=0.156  Sum_probs=110.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee-------------------CCCCCeEECccccccccCCCCCcccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF-------------------DEDHVAKLFDFSLAESIPDGETHIKDAIPIGI   62 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~-------------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~   62 (163)
                      ||+.||+|||   +.+++||||||+||++                   +.++.++|+|||++........     ...++
T Consensus       131 qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt  202 (355)
T 2eu9_A          131 QLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHT-----TIVAT  202 (355)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCC-----SSCSC
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcccccccccc-----CCcCC
Confidence            7899999999   8999999999999999                   5678999999999976543321     34688


Q ss_pred             ccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhh-------------------------
Q 043958           63 MGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL-------------------------  117 (163)
Q Consensus        63 ~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  117 (163)
                      ..|+|||.+.+..++.++|+||+|+++++++++..||........ .........                         
T Consensus       203 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  281 (355)
T 2eu9_A          203 RHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH-LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDE  281 (355)
T ss_dssp             GGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCT
T ss_pred             CcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCcHHHhhhccchhhhccccccccc
Confidence            999999999988999999999999999999999888764332211 110000000                         


Q ss_pred             ---------------cccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          118 ---------------CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       118 ---------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                                     ..........+..+.+|+.+||+.||++|||+.++++
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          282 NSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             TSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                           0000111234568999999999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=2e-32  Score=201.75  Aligned_cols=147  Identities=20%  Similarity=0.324  Sum_probs=105.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-------------CCeEECccccccccCCCCCcc--cccCcccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-------------HVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFV   66 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-------------~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~   66 (163)
                      ||+.||+|||   +.+++||||||+||+++.+             +.++|+|||++..........  ......||+.|+
T Consensus       123 qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~  199 (434)
T 2rio_A          123 QIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWR  199 (434)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTS
T ss_pred             HHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCcc
Confidence            7899999999   8999999999999999654             479999999998776543221  122346899999


Q ss_pred             Ccccccc-------CCCCcccceeecchhhHHHhh-hccccccccchhhccchhhhhhhc---ccchhhHHHHHHHHHHH
Q 043958           67 ATEYVTT-------GDYNEKCDVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELC---IQSSEKDKQVQAFVELA  135 (163)
Q Consensus        67 ~PE~~~~-------~~~~~~~Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li  135 (163)
                      |||.+.+       ..++.++||||+||+++++++ +..|+.......   ..+......   .........+.++.+++
T Consensus       200 aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~li  276 (434)
T 2rio_A          200 APELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---SNIIRGIFSLDEMKCLHDRSLIAEATDLI  276 (434)
T ss_dssp             CHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---HHHHHTCCCCCCCTTCCCHHHHHHHHHHH
T ss_pred             CHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---HHHhcCCCCcccccccccccchHHHHHHH
Confidence            9999875       568899999999999999998 555553222111   111111111   11112345678999999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||++|||+.++++
T Consensus       277 ~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          277 SQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHTCSSGGGSCCHHHHHT
T ss_pred             HHHhhCChhhCCCHHHHHh
Confidence            9999999999999999985

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=7.2e-33  Score=196.23  Aligned_cols=150  Identities=21%  Similarity=0.300  Sum_probs=108.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC---eEECccccccccCCCCCc-----ccccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~---~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.||+|||   +.+++||||||+||+++.++.   +||+|||++.........     .......++..|+|||.+.+
T Consensus       119 qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (316)
T 2ac3_A          119 DVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEA  195 (316)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHH
T ss_pred             HHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhc
Confidence            7899999999   899999999999999988776   999999998765432211     11123358899999999875


Q ss_pred             -----CCCCcccceeecchhhHHHhhhccccccccch--------------hhccchhhhhhhcccchhhHHHHHHHHHH
Q 043958           74 -----GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTF--------------DEIVDPVIREELCIQSSEKDKQVQAFVEL  134 (163)
Q Consensus        74 -----~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  134 (163)
                           ..++.++||||+|+++++++++..||......              ..+...+.......+.......+..+.++
T Consensus       196 ~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l  275 (316)
T 2ac3_A          196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDL  275 (316)
T ss_dssp             TSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHH
T ss_pred             ccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHH
Confidence                 45788999999999999999999887643321              11222222222222222223456789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.||++|||+.++++
T Consensus       276 i~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          276 ISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHhhCChhhCCCHHHHhc
Confidence            99999999999999999987

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=1.8e-32  Score=193.39  Aligned_cols=145  Identities=20%  Similarity=0.288  Sum_probs=115.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++|+||||+||++   +.++.++++|||++........    ....++..|+|||.+.+..++.
T Consensus       114 qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~  186 (304)
T 2jam_A          114 QVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIM----STACGTPGYVAPEVLAQKPYSK  186 (304)
T ss_dssp             HHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTT----HHHHSCCCBCCTTTBSSCSCCH
T ss_pred             HHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCcc----ccccCCCCccChHHhccCCCCc
Confidence            7899999999   8999999999999999   7889999999999865443211    1235788999999999888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+... ...++...+.........+.....+..+.+++.+||..||++|||+.++++
T Consensus       187 ~~Di~slG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          187 AVDCWSIGVITYILLCGYPPFYEE-TESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTS-CHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCC-CHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999998887543 333344444333332333333456688999999999999999999999986

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=1.6e-32  Score=202.20  Aligned_cols=93  Identities=20%  Similarity=0.304  Sum_probs=74.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--------------------ccccCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--------------------IKDAIPIG   61 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------------~~~~~~~~   61 (163)
                      ||+.||+|||   +.+++||||||+|||++.++.+||+|||+++........                    .......+
T Consensus       137 qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  213 (432)
T 3n9x_A          137 NLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVV  213 (432)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCC
T ss_pred             HHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCC
Confidence            7899999999   899999999999999999999999999999876543221                    11234578


Q ss_pred             cccccCcccc-ccCCCCcccceeecchhhHHHhhhcc
Q 043958           62 IMGFVATEYV-TTGDYNEKCDVFSFAGDRHWLLNRVK   97 (163)
Q Consensus        62 ~~~~~~PE~~-~~~~~~~~~Dv~s~g~~~~~l~~~~~   97 (163)
                      |+.|+|||.+ .+..++.++||||+||++++++++..
T Consensus       214 t~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~  250 (432)
T 3n9x_A          214 TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ  250 (432)
T ss_dssp             CCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred             CccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence            9999999986 45569999999999999999997533

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=7.1e-32  Score=195.89  Aligned_cols=96  Identities=17%  Similarity=0.135  Sum_probs=81.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC--CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||.|||.. ..+|+||||||+|||++  .++.+||+|||++........     ...+++.|+|||.+.+..++.+
T Consensus       165 qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~  238 (382)
T 2vx3_A          165 QMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY-----QYIQSRFYRSPEVLLGMPYDLA  238 (382)
T ss_dssp             HHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCCC-----SSCSCGGGCCHHHHTTCCCCTH
T ss_pred             HHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccccc-----cccCCccccChHHHcCCCCCcH
Confidence            789999999931 36899999999999994  578899999999977643321     3468889999999999899999


Q ss_pred             cceeecchhhHHHhhhcccccccc
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECN  103 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~  103 (163)
                      +||||+|+++++++++..||....
T Consensus       239 ~DiwSlG~il~elltg~~pf~~~~  262 (382)
T 2vx3_A          239 IDMWSLGCILVEMHTGEPLFSGAN  262 (382)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999988876443

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.97  E-value=9.8e-33  Score=196.17  Aligned_cols=147  Identities=18%  Similarity=0.224  Sum_probs=112.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC---eEECccccccccCCCCCcccccCccccccccCccccc---cCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT---TGD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~---~~~   75 (163)
                      |++.||.|||   +++++||||||+||+++.++.   ++|+|||++.........   ....++..|+|||.+.   ...
T Consensus       122 qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~  195 (322)
T 2ycf_A          122 QMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTYLAPEVLVSVGTAG  195 (322)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHH---HHHHSCCTTCCHHHHHHTTTTT
T ss_pred             HHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccccc---ccccCCcCccCchhhccCCCCC
Confidence            7899999999   899999999999999987664   999999999776543211   1235788999999874   456


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++|+||+|+++++++++..|+........+...................+..+.+++.+||+.||++|||+.++++
T Consensus       196 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          196 YNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             CTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            8899999999999999999988876443333333333333222222223345678999999999999999999999985

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=3.5e-32  Score=203.78  Aligned_cols=145  Identities=23%  Similarity=0.289  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC---CeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH---VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +.+++||||||+||+++.++   .+||+|||++..........   ...|++.|+|||.+. +.++.
T Consensus       154 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~-~~~~~  226 (504)
T 3q5i_A          154 QILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR---DRLGTAYYIAPEVLK-KKYNE  226 (504)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBC---CCCSCTTTCCHHHHT-TCBCT
T ss_pred             HHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccc---cccCCcCCCCHHHhc-cCCCc
Confidence            7899999999   89999999999999998776   69999999998765443222   346899999999876 56899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+|++++++++|..||.. ....+++..+..+............+..+.+++.+||..||.+|||+.++++
T Consensus       227 ~~DiwslG~il~~ll~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          227 KCDVWSCGVIMYILLCGYPPFGG-QNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999887753 4445556655555544444444566789999999999999999999999986

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=9.2e-33  Score=196.68  Aligned_cols=155  Identities=17%  Similarity=0.291  Sum_probs=117.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++.......... ......++..|+|||.+.+..++.++
T Consensus       153 qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  229 (326)
T 2w1i_A          153 QICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVAS  229 (326)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchh
Confidence            7899999999   8999999999999999999999999999998776543321 12233466789999999888899999


Q ss_pred             ceeecchhhHHHhhhccccccccc-hhh---------c----cchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCC
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNT-FDE---------I----VDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDR  146 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~-~~~---------~----~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  146 (163)
                      |+||+|+++++++++..|+..... ..+         .    +........  ..+....++..+.+++.+||+.||++|
T Consensus       230 Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~R  307 (326)
T 2w1i_A          230 DVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG--RLPRPDGCPDEIYMIMTECWNNNVNQR  307 (326)
T ss_dssp             HHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCC--CCCCCCcccHHHHHHHHHHcCCChhhC
Confidence            999999999999998777542210 000         0    000111111  111223456789999999999999999


Q ss_pred             CCHHHHHHHHHHHhh
Q 043958          147 PTMIDVAKQLRQAYR  161 (163)
Q Consensus       147 pt~~~i~~~L~~~~~  161 (163)
                      ||+.++++.|+++.+
T Consensus       308 ps~~el~~~L~~l~~  322 (326)
T 2w1i_A          308 PSFRDLALRVDQIRD  322 (326)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHH
Confidence            999999999998865

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=6e-32  Score=192.72  Aligned_cols=144  Identities=17%  Similarity=0.184  Sum_probs=110.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-------------------CCCeEECccccccccCCCCCcccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-------------------DHVAKLFDFSLAESIPDGETHIKDAIPIGI   62 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-------------------~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~   62 (163)
                      |++.||+|||   +++++||||||+||+++.                   ++.++++|||++........     ...++
T Consensus       126 qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~-----~~~gt  197 (339)
T 1z57_A          126 QICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS-----TLVST  197 (339)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSCCC-----SSCSC
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccccc-----cccCC
Confidence            7899999999   899999999999999987                   66899999999976543321     34688


Q ss_pred             ccccCccccccCCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhh-------------------------
Q 043958           63 MGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL-------------------------  117 (163)
Q Consensus        63 ~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------  117 (163)
                      ..|+|||.+.+..++.++|+||+|+++++++++..|+....... ..........                         
T Consensus       198 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  276 (339)
T 1z57_A          198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDE  276 (339)
T ss_dssp             GGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCT
T ss_pred             ccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccc
Confidence            99999999998889999999999999999999988876433221 1110000000                         


Q ss_pred             ---------------cccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          118 ---------------CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       118 ---------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                                     ..........+..+.+++.+||+.||++|||+.++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          277 HSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             TSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                           0000112245678999999999999999999999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.6e-32  Score=199.10  Aligned_cols=154  Identities=16%  Similarity=0.160  Sum_probs=119.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee----CCCCCeEECccccccccCCCCCcccccCccccccccCcccccc----
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT----   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~----~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~----   73 (163)
                      |++.||+|||   +.+++||||||+||++    +.++.+||+|||+++........   ....++..|+|||.+.+    
T Consensus       120 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~  193 (396)
T 4eut_A          120 DVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VSLYGTEEYLHPDMYERAVLR  193 (396)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGS---SCSSSCCTTCCHHHHHHHCC-
T ss_pred             HHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCcc---ccccCCccccCHHHhhccccc
Confidence            7899999999   8999999999999999    77788999999999776543322   23468999999998864    


Q ss_pred             ----CCCCcccceeecchhhHHHhhhccccccccc---hhhccchhhhhhh---------------------cccchhhH
Q 043958           74 ----GDYNEKCDVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREEL---------------------CIQSSEKD  125 (163)
Q Consensus        74 ----~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~---------------------~~~~~~~~  125 (163)
                          ..++.++|+||+|+++|++++|..||.....   ..+.+.....+.+                     ........
T Consensus       194 ~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  273 (396)
T 4eut_A          194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSR  273 (396)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCH
T ss_pred             cccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccch
Confidence                4577899999999999999999988764222   1222222222211                     11122335


Q ss_pred             HHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958          126 KQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus       126 ~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      ..+..+.+++.+||+.||++|||+.++++.++++.+
T Consensus       274 ~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          274 GLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             HHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            678899999999999999999999999999998865

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=2.5e-32  Score=194.39  Aligned_cols=147  Identities=16%  Similarity=0.159  Sum_probs=105.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+ ..++.++
T Consensus       108 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~  182 (324)
T 3mtl_A          108 QLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY--DNEVVTLWYRPPDILLGSTDYSTQI  182 (324)
T ss_dssp             HHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHH
T ss_pred             HHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcccc--ccccCcccccChhhhcCCCCCCcHH
Confidence            7899999999   8999999999999999999999999999987554332221  12357889999999876 5689999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcc--------------------------cchhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI--------------------------QSSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..||..... .+....+......+                          ........++.+.+|
T Consensus       183 DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  261 (324)
T 3mtl_A          183 DMWGVGCIFYEMATGRPLFPGSTV-EEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADL  261 (324)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHH
Confidence            999999999999999887754332 22221111100000                          000112345678999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.||++|||+.++++
T Consensus       262 i~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          262 LTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHcCcCcccCCCHHHHhc
Confidence            99999999999999999986

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=3.2e-32  Score=196.54  Aligned_cols=149  Identities=15%  Similarity=0.164  Sum_probs=111.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCcccccc-CCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTT-GDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~-~~~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++........... .....+|+.|+|||.+.+ ..++.+
T Consensus       136 qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  212 (364)
T 3qyz_A          136 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS  212 (364)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTH
T ss_pred             HHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcc
Confidence            7899999999   89999999999999999999999999999977654332211 224468999999998764 458999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhccc---------------------------chhhHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ---------------------------SSEKDKQVQAFV  132 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~  132 (163)
                      +||||+|+++++++++..||......+ .+..+......+.                           .......+..+.
T Consensus       213 ~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (364)
T 3qyz_A          213 IDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL  291 (364)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHH
T ss_pred             hhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHH
Confidence            999999999999999988775443322 2221111000000                           000123457899


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+.+||+.||++|||+.++++
T Consensus       292 ~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          292 DLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHcCCChhhCCCHHHHhc
Confidence            9999999999999999999986

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.4e-32  Score=198.01  Aligned_cols=146  Identities=22%  Similarity=0.266  Sum_probs=111.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC--CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG--DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~   79 (163)
                      |++.||.|||   +++++||||||+||+++.++.+||+|||+++.......... ....||+.|+|||.+.+.  .++.+
T Consensus       167 qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~  242 (355)
T 1vzo_A          167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA-YDFCGTIEYMAPDIVRGGDSGHDKA  242 (355)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGG-CGGGSCCTTCCHHHHTTCC---CTH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcc-cCcccCcCccChhhhcCCCCCCCch
Confidence            7899999999   89999999999999999999999999999976643322222 234689999999999863  47889


Q ss_pred             cceeecchhhHHHhhhccccccccc---hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMID  151 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~  151 (163)
                      +||||||+++++++++..|+.....   ..++........    .......+..+.+++.+||..||.+||     |+.+
T Consensus       243 ~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~e  318 (355)
T 1vzo_A          243 VDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE----PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADE  318 (355)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHH
T ss_pred             hhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC----CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHH
Confidence            9999999999999999888764321   122222222221    122234567899999999999999999     8888


Q ss_pred             HHHH
Q 043958          152 VAKQ  155 (163)
Q Consensus       152 i~~~  155 (163)
                      +++.
T Consensus       319 ll~h  322 (355)
T 1vzo_A          319 IKEH  322 (355)
T ss_dssp             HHTS
T ss_pred             HHcC
Confidence            8763

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.97  E-value=8.8e-33  Score=195.85  Aligned_cols=155  Identities=14%  Similarity=0.146  Sum_probs=114.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-------cccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-------KDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~PE~~~~~   74 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........       ......++..|+|||.+.+.
T Consensus       142 qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  218 (317)
T 2buj_A          142 GICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ  218 (317)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccC
Confidence            7899999999   8999999999999999999999999999986554221110       00123468899999998755


Q ss_pred             C---CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           75 D---YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        75 ~---~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      .   ++.++||||+|+++++++++..|+.................  ...+.....+..+.+++.+||+.||.+|||+.+
T Consensus       219 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~  296 (317)
T 2buj_A          219 SHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ--LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPL  296 (317)
T ss_dssp             SEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc--CCCCccccCCHHHHHHHHHHhhcChhhCCCHHH
Confidence            4   68899999999999999999888743211111111111111  111222345678999999999999999999999


Q ss_pred             HHHHHHHHhh
Q 043958          152 VAKQLRQAYR  161 (163)
Q Consensus       152 i~~~L~~~~~  161 (163)
                      +++.|+.+..
T Consensus       297 ll~~L~~~~~  306 (317)
T 2buj_A          297 LLSQLEALQP  306 (317)
T ss_dssp             HHHHHHHTCC
T ss_pred             HHHHhhhcCC
Confidence            9999998754

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=1.3e-31  Score=188.83  Aligned_cols=145  Identities=16%  Similarity=0.169  Sum_probs=114.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC--CCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~   79 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++++|||++................++..|+|||.+.+..  ++.+
T Consensus       117 qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  193 (305)
T 2wtk_C          117 QLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFK  193 (305)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHH
T ss_pred             HHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcch
Confidence            7899999999   8999999999999999999999999999998765433333333456889999999987644  3679


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+|+++++++++..|+... ...+....+.......    ...++..+.+++.+||+.||++|||+.++++
T Consensus       194 ~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          194 VDIWSAGVTLYNITTGLYPFEGD-NIYKLFENIGKGSYAI----PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHCCCCC----CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHhcCCCCC----CCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999999999999998887543 3333333333332211    2234578999999999999999999999986

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=2.6e-32  Score=199.56  Aligned_cols=150  Identities=16%  Similarity=0.137  Sum_probs=102.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee----CCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccC-C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF----DEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTG-D   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~----~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~-~   75 (163)
                      ||+.||+|||   +.+++||||||+|||+    +.++.+||+|||+++........ .......+|+.|+|||.+.+. .
T Consensus       136 qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  212 (405)
T 3rgf_A          136 QILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH  212 (405)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCS
T ss_pred             HHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCc
Confidence            7899999999   8999999999999999    77789999999999776543221 122244689999999999874 4


Q ss_pred             CCcccceeecchhhHHHhhhccccccccch--------hhccchhhhh-----------------------hhc----cc
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTF--------DEIVDPVIRE-----------------------ELC----IQ  120 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~--------~~~~~~~~~~-----------------------~~~----~~  120 (163)
                      ++.++||||+||++++++++..||......        .+.+..+...                       ...    ..
T Consensus       213 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (405)
T 3rgf_A          213 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN  292 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTT
T ss_pred             ccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCc
Confidence            899999999999999999998887532211        0001000000                       000    00


Q ss_pred             chhh-------HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          121 SSEK-------DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       121 ~~~~-------~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ....       ...+..+.+|+.+||..||++|||+.++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          293 CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             CCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             chhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0000       001467889999999999999999999986

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=1.8e-31  Score=186.58  Aligned_cols=141  Identities=18%  Similarity=0.221  Sum_probs=112.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++........    ....++..|+|||.+.+..++.++|
T Consensus       122 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~D  194 (284)
T 2vgo_A          122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRR----RTMCGTLDYLPPEMIEGKTHDEKVD  194 (284)
T ss_dssp             HHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCB----CCCCSCGGGCCHHHHTTCCBCTTHH
T ss_pred             HHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccccc----ccccCCCCcCCHHHhccCCCCcccc
Confidence            7899999999   89999999999999999999999999999866543322    1345888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.... ..+....+.......    ....+..+.+++.+||+.||++|||+.++++
T Consensus       195 i~slG~il~~l~~g~~pf~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          195 LWCAGVLCYEFLVGMPPFDSPS-HTETHRRIVNVDLKF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTTCCCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhHHHHHHHHHHCCCCCCCCC-HhHHHHHHhccccCC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            9999999999999988875433 222222222222111    1234578999999999999999999999986

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=7.1e-32  Score=188.01  Aligned_cols=143  Identities=18%  Similarity=0.225  Sum_probs=91.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       120 qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  194 (278)
T 3cok_A          120 QIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH--YTLCGTPNYISPEIATRSAHGLESD  194 (278)
T ss_dssp             HHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------------------------------CTH
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcc--eeccCCCCcCCcchhcCCCCCchhh
Confidence            7899999999   8999999999999999999999999999997765332221  1335888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.... ..+............    ....+..+.+++.+||+.||++|||+.++++
T Consensus       195 i~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          195 VWSLGCMFYTLLIGRPPFDTDT-VKNTLNKVVLADYEM----PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCCS-CC-----CCSSCCCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCChh-HHHHHHHHhhcccCC----ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            9999999999999988875432 222222222222111    1234568999999999999999999999876

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=2e-32  Score=197.59  Aligned_cols=145  Identities=15%  Similarity=0.249  Sum_probs=102.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC--eEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV--AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~--~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++.++.  +||+|||+++........   ....||+.|+|||.+.+..++.+
T Consensus       124 ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~  197 (361)
T 3uc3_A          124 QLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLLRQEYDGK  197 (361)
T ss_dssp             HHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------------------CTTSCHHHHHCSSCCHH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCC---CCCcCCCCcCChhhhcCCCCCCC
Confidence            7899999999   899999999999999987765  999999998644322221   23468999999999988877665


Q ss_pred             -cceeecchhhHHHhhhccccccccch---hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 -CDVFSFAGDRHWLLNRVKKHIECNTF---DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 -~Dv~s~g~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                       +||||+|++++++++|..||......   ............  ..+.....++.+.+|+.+||+.||++|||+.++++
T Consensus       198 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          198 IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY--SIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC--CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             eeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC--CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence             89999999999999999887653322   222222222221  12222234678999999999999999999999986

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=1e-31  Score=202.04  Aligned_cols=139  Identities=22%  Similarity=0.324  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+++||||||+||+++.+|.+||+|||++..........  ....||+.|+|||.+.+..++.++|
T Consensus       297 qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~--~~~~GT~~Y~APE~l~~~~~~~~~D  371 (543)
T 3c4z_A          297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTPGFMAPELLLGEEYDFSVD  371 (543)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCB--CCCCSCTTTSCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCccc--ccccCCccccChhhhcCCCCChHHh
Confidence            7899999999   8999999999999999999999999999998765443322  2346899999999999889999999


Q ss_pred             eeecchhhHHHhhhcccccccc---chhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECN---TFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                      +||+||++|++++|..||....   ...++...+......    .+...+..+.+++.+||+.||++||++
T Consensus       372 iwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~----~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          372 YFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVT----YPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC----CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             cCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccC----CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence            9999999999999998886532   122333333333221    123456789999999999999999975

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.97  E-value=7.1e-32  Score=189.63  Aligned_cols=146  Identities=20%  Similarity=0.235  Sum_probs=116.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc------cCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT------TGD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~------~~~   75 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++..........   ...++..|+|||.+.      ...
T Consensus       132 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  205 (298)
T 1phk_A          132 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPG  205 (298)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHHHCTTSCC
T ss_pred             HHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccc---cccCCccccCHHHhcccccccccc
Confidence            7899999999   8999999999999999999999999999997765443222   345888999999885      346


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++|+||+|+++++++++..|+.... .................+.....+..+.+++.+||+.||++|||+.++++
T Consensus       206 ~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          206 YGKEVDMWSTGVIMYTLLAGSPPFWHRK-QMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCSS-HHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCcccccHhHHHHHHHHHHCCCCCcCcc-HHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            8889999999999999999988875433 33333333343333333344456788999999999999999999999875

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.97  E-value=3.8e-32  Score=191.06  Aligned_cols=147  Identities=21%  Similarity=0.279  Sum_probs=105.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCC------------cccccCccccccccCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGET------------HIKDAIPIGIMGFVATE   69 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~~~PE   69 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++........            ........++..|+|||
T Consensus       124 qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  200 (303)
T 1zy4_A          124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE  200 (303)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-------------------------CTTSCHH
T ss_pred             HHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcc
Confidence            7899999999   89999999999999999999999999999976543211            11112346888999999


Q ss_pred             ccccC-CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           70 YVTTG-DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        70 ~~~~~-~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      .+.+. .++.++|+||+|++++++++   |+.......+............+.......+..+.+++.+||+.||++|||
T Consensus       201 ~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps  277 (303)
T 1zy4_A          201 VLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG  277 (303)
T ss_dssp             HHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC
T ss_pred             cccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcC
Confidence            98764 68899999999999999997   433222222222222222222222233345677899999999999999999


Q ss_pred             HHHHHH
Q 043958          149 MIDVAK  154 (163)
Q Consensus       149 ~~~i~~  154 (163)
                      +.++++
T Consensus       278 ~~~ll~  283 (303)
T 1zy4_A          278 ARTLLN  283 (303)
T ss_dssp             HHHHHH
T ss_pred             HHHHhC
Confidence            999986

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=4.5e-32  Score=191.73  Aligned_cols=147  Identities=16%  Similarity=0.203  Sum_probs=105.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++|+|||++...........  ...++..|+|||.+.+ ..++.++
T Consensus       110 ~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~~  184 (311)
T 4agu_A          110 QTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYD--DEVATRWYRSPELLVGDTQYGPPV  184 (311)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHH
T ss_pred             HHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccC--CCcCCccccChHHHhcCCCCCcch
Confidence            7899999999   89999999999999999999999999999977654332221  3358889999999876 5689999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh-------------------hhccc--------chhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------ELCIQ--------SSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~--------~~~~~~~~~~~~~  133 (163)
                      |+||+|+++++++++..|+......+.... ....                   .....        .......+..+.+
T Consensus       185 Di~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (311)
T 4agu_A          185 DVWAIGCVFAELLSGVPLWPGKSDVDQLYL-IRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALG  263 (311)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHH-HHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHH
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCHHHHHHH-HHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHH
Confidence            999999999999999888764433221111 0000                   00000        0011234567999


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+||+.||++|||+.++++
T Consensus       264 li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          264 LLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHHHHCCSSTTTSCCHHHHHT
T ss_pred             HHHHHccCChhhcCCHHHHhc
Confidence            999999999999999999986

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=3.1e-32  Score=196.92  Aligned_cols=144  Identities=22%  Similarity=0.247  Sum_probs=101.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      ||+.||+|||   +.+++||||||+||+++.++.+||+|||+++......     ....+|..|+|||.+.+ ..++.++
T Consensus       140 qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  211 (367)
T 2fst_X          140 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM-----TGYVATRWYRAPEIMLNWMHYNQTV  211 (367)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTH
T ss_pred             HHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccccccccC-----CCcCcCcCccChHHHcCCcCCCchh
Confidence            7899999999   8999999999999999999999999999997654321     13468899999999876 5689999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhh----------------------hc--ccc---hhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE----------------------LC--IQS---SEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~--~~~---~~~~~~~~~~~~  133 (163)
                      ||||+||+++++++|..||........ +..+...-                      ..  ...   ......++.+.+
T Consensus       212 DiwslG~il~ell~g~~pf~~~~~~~~-l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  290 (367)
T 2fst_X          212 DIWSVGCIMAELLTGRTLFPGTDHIDQ-LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVD  290 (367)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHH
Confidence            999999999999999888765443221 11111100                      00  000   001123567899


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+.+||..||++|||+.++++
T Consensus       291 Ll~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          291 LLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhCCCCcccCcCHHHHhc
Confidence            999999999999999999986

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.97  E-value=8e-32  Score=190.69  Aligned_cols=146  Identities=21%  Similarity=0.274  Sum_probs=114.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       133 ~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  207 (314)
T 3com_A          133 STLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKR--NTVIGTPFWMAPEVIQEIGYNCVAD  207 (314)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCB--CCCCSCGGGCCHHHHSSSCBCTTHH
T ss_pred             HHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcccc--CccCCCCCccChhhcCCCCCCcccc
Confidence            7899999999   8999999999999999999999999999997665432221  2346888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.......... .. ..............+..+.+++.+||+.||.+|||+.++++
T Consensus       208 i~slG~il~~l~~g~~p~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          208 IWSLGITAIEMAEGKPPYADIHPMRAIF-MI-PTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHHHHHH-HH-HHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHH-HH-hcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999988876443322211 11 11111112223345678999999999999999999999986

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=2.2e-32  Score=193.61  Aligned_cols=147  Identities=16%  Similarity=0.258  Sum_probs=104.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc--------
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT--------   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~--------   73 (163)
                      |++.||.|||   +.+++|+||||+||+++. +.++|+|||++................++..|+|||.+.+        
T Consensus       135 qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  210 (313)
T 3cek_A          135 NMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENG  210 (313)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC------
T ss_pred             HHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccc
Confidence            7899999999   899999999999999964 8899999999977654433322234468999999999875        


Q ss_pred             ---CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 ---GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ---~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                         ..++.++|+||+|+++++++++..|+.........+..........  ......+..+.+++.+||+.||++|||+.
T Consensus       211 ~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~  288 (313)
T 3cek_A          211 KSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEI--EFPDIPEKDLQDVLKCCLKRDPKQRISIP  288 (313)
T ss_dssp             ----CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCC--CCCCCSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             cccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccccc--CCcccchHHHHHHHHHHccCCcccCcCHH
Confidence               4678899999999999999999988754332222222222211111  11112346799999999999999999999


Q ss_pred             HHHH
Q 043958          151 DVAK  154 (163)
Q Consensus       151 ~i~~  154 (163)
                      ++++
T Consensus       289 ell~  292 (313)
T 3cek_A          289 ELLA  292 (313)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            9986

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=3.2e-32  Score=193.07  Aligned_cols=153  Identities=19%  Similarity=0.221  Sum_probs=110.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCC---CcccccCccccccccCcccccc-----
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGE---THIKDAIPIGIMGFVATEYVTT-----   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~~~~~~PE~~~~-----   73 (163)
                      |++.||+|||   +.+++|+||||+||+++ ++.++++|||++.......   .........++..|+|||.+.+     
T Consensus       138 qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~  213 (319)
T 2y4i_B          138 EIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT  213 (319)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC-
T ss_pred             HHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccc
Confidence            7899999999   89999999999999998 6799999999986553221   1111223458889999998874     


Q ss_pred             ----CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCH
Q 043958           74 ----GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTM  149 (163)
Q Consensus        74 ----~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~  149 (163)
                          ..++.++||||+|+++++++++..|+... .............. . .......+..+.+++.+||+.+|++|||+
T Consensus       214 ~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~-~~~~~~~~~~~~~~-~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  290 (319)
T 2y4i_B          214 EEDKLPFSKHSDVFALGTIWYELHAREWPFKTQ-PAEAIIWQMGTGMK-P-NLSQIGMGKEISDILLFCWAFEQEERPTF  290 (319)
T ss_dssp             -CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSC-CHHHHHHHHHTTCC-C-CCCCSSCCTTHHHHHHHHHCSSTTTSCCH
T ss_pred             cccccCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHhccCCC-C-CCCcCCCCHHHHHHHHHHhcCChhhCcCH
Confidence                34788999999999999999998887533 33333332222211 1 11111345679999999999999999999


Q ss_pred             HHHHHHHHHHhh
Q 043958          150 IDVAKQLRQAYR  161 (163)
Q Consensus       150 ~~i~~~L~~~~~  161 (163)
                      .++++.|+++..
T Consensus       291 ~~l~~~l~~l~~  302 (319)
T 2y4i_B          291 TKLMDMLEKLPK  302 (319)
T ss_dssp             HHHHHHHTTC--
T ss_pred             HHHHHHHHHHHH
Confidence            999999988754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=1.2e-31  Score=192.92  Aligned_cols=148  Identities=18%  Similarity=0.214  Sum_probs=110.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~   79 (163)
                      |++.||.|||.. +.+++||||||+||+++. ++.+||+|||++..........   ...++..|+|||.+.+.. ++.+
T Consensus       137 qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~  212 (360)
T 3e3p_A          137 QLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV---AYICSRYYRAPELIFGNQHYTTA  212 (360)
T ss_dssp             HHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCC---STTSCGGGCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcc---cccCCcceeCHHHHcCCCCCCcH
Confidence            788999999943 478999999999999986 8999999999998765443322   335789999999987654 8999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhccc----------------------------chhhHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ----------------------------SSEKDKQVQAF  131 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~  131 (163)
                      +||||+|+++++++++..||....... .+.........+.                            .......+..+
T Consensus       213 ~Di~slG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (360)
T 3e3p_A          213 VDIWSVGCIFAEMMLGEPIFRGDNSAG-QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEA  291 (360)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCcCCCChHH-HHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHH
Confidence            999999999999999988876543222 2222111100000                            00011146789


Q ss_pred             HHHHHhccccCcCCCCCHHHHHH
Q 043958          132 VELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       132 ~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+|+.+||+.||++|||+.++++
T Consensus       292 ~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          292 YDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhccCccccCCHHHHhc
Confidence            99999999999999999999986

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=3.8e-32  Score=205.19  Aligned_cols=143  Identities=20%  Similarity=0.289  Sum_probs=113.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+|+||||||+|||++.+|.+||+|||++..........   ...||+.|+|||.+.+..++.++|
T Consensus       294 qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~---~~~GT~~Y~APEvl~~~~~~~~~D  367 (576)
T 2acx_A          294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK---GRVGTVGYMAPEVVKNERYTFSPD  367 (576)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEE---CCCSCGGGCCHHHHTTCEESSHHH
T ss_pred             HHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccCcccc---ccCCCccccCHHHHcCCCCCccch
Confidence            7899999999   8999999999999999999999999999998775543322   236899999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccc---hhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNT---FDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVA  153 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~  153 (163)
                      +||+|++++++++|..||.....   ..++...+....    .......+..+.+++.+||..||++||     ++.+++
T Consensus       368 iwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~----~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil  443 (576)
T 2acx_A          368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP----EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVK  443 (576)
T ss_dssp             HHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc----ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHH
Confidence            99999999999999888764322   122222222221    112234567899999999999999999     678876


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      +
T Consensus       444 ~  444 (576)
T 2acx_A          444 E  444 (576)
T ss_dssp             T
T ss_pred             h
Confidence            5

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=3.1e-32  Score=194.78  Aligned_cols=146  Identities=19%  Similarity=0.282  Sum_probs=93.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++||||||+||+++.   ++.++|+|||++.........    ...+++.|+|||.+.+..++.
T Consensus       136 ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~----~~~~t~~y~aPE~~~~~~~~~  208 (336)
T 3fhr_A          136 DIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQ----TPCYTPYYVAPEVLGPEKYDK  208 (336)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------CHHHH
T ss_pred             HHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccc----cCCCCcCccChhhhCCCCCCc
Confidence            7899999999   899999999999999976   455999999999766533222    335788999999998888999


Q ss_pred             ccceeecchhhHHHhhhccccccccchh---hccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFD---EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+.......   ...............+.....+..+.+++.+||+.||++|||+.++++
T Consensus       209 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          209 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999988875433211   111222222222233333456788999999999999999999999997

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=1.2e-31  Score=193.67  Aligned_cols=145  Identities=15%  Similarity=0.150  Sum_probs=107.8

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeC------CCCCeEECccccccccCCCCCcccccCccccccccCccccccC
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFD------EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~   74 (163)
                      ||+.||+|||   ++ +++||||||+||+++      ..+.++|+|||++........     ...+|+.|+|||.+.+.
T Consensus       139 qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~  210 (373)
T 1q8y_A          139 QLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT-----NSIQTREYRSPEVLLGA  210 (373)
T ss_dssp             HHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCC-----SCCSCGGGCCHHHHHTC
T ss_pred             HHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCCCC-----CCCCCccccCcHHHhCC
Confidence            7899999999   77 999999999999994      444799999999976653321     33688999999999988


Q ss_pred             CCCcccceeecchhhHHHhhhccccccccch-----hhccchhhh-----------------------------------
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRVKKHIECNTF-----DEIVDPVIR-----------------------------------  114 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~-----------------------------------  114 (163)
                      .++.++||||+|+++++++++..||......     ...+.....                                   
T Consensus       211 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (373)
T 1q8y_A          211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW  290 (373)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccccccc
Confidence            8999999999999999999998887643210     000000000                                   


Q ss_pred             ---hhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          115 ---EELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       115 ---~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                         .............+..+.+|+.+||+.||++|||+.++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          291 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             chhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence               0000011123467789999999999999999999999986

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=5.3e-32  Score=192.42  Aligned_cols=146  Identities=16%  Similarity=0.172  Sum_probs=111.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++........   .....++..|+|||.+.+..++.++|
T Consensus       128 qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~D  201 (326)
T 1blx_A          128 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVD  201 (326)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCC---ccccccccceeCHHHHhcCCCCcchh
Confidence            7899999999   89999999999999999999999999999876543221   12346888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhh-------h----------------cccchhhHHHHHHHHHHHHhc
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE-------L----------------CIQSSEKDKQVQAFVELAVKC  138 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------~----------------~~~~~~~~~~~~~~~~li~~c  138 (163)
                      +||+|+++++++++..||....... .+..+....       .                ..........+..+.+++.+|
T Consensus       202 i~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  280 (326)
T 1blx_A          202 LWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKC  280 (326)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHH
Confidence            9999999999999988876443222 111111100       0                000011123557899999999


Q ss_pred             cccCcCCCCCHHHHHH
Q 043958          139 VSESAEDRPTMIDVAK  154 (163)
Q Consensus       139 l~~~p~~Rpt~~~i~~  154 (163)
                      |+.||++|||+.++++
T Consensus       281 L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          281 LTFNPAKRISAYSALS  296 (326)
T ss_dssp             SCSSTTTSCCHHHHHT
T ss_pred             cCCCcccCCCHHHHhc
Confidence            9999999999999985

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=6.4e-32  Score=189.55  Aligned_cols=146  Identities=18%  Similarity=0.272  Sum_probs=110.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-CCCeEECccccccccCCCCCcccccCccccccccCccccccCC--CCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~   78 (163)
                      |++.||.|||   +.+++|+||||+||+++. ++.++|+|||++..........  ....++..|+|||.+.+..  ++.
T Consensus       130 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~  204 (295)
T 2clq_A          130 QILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCT--ETFTGTLQYMAPEIIDKGPRGYGK  204 (295)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSH
T ss_pred             HHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcc--cccCCCccccChhhhcCCCCCCCc
Confidence            7899999999   899999999999999987 8999999999997765432211  2346888999999987654  788


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+.................  .........+..+.+++.+||+.||++|||+.++++
T Consensus       205 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          205 AADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK--VHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--ccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999999999999999888764433222221111111  111222345678999999999999999999999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=7.4e-32  Score=195.16  Aligned_cols=144  Identities=17%  Similarity=0.218  Sum_probs=107.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++........     ...++..|+|||.+.+ ..++.++
T Consensus       152 qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~  223 (371)
T 4exu_A          152 QMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-----GYVVTRWYRAPEVILSWMHYNQTV  223 (371)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTH
T ss_pred             HHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcC-----CcccCccccCHHHhcCCCCCCcHH
Confidence            7899999999   89999999999999999999999999999976543321     3357889999999887 6789999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhc-----------------------ccc----hhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC-----------------------IQS----SEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~----~~~~~~~~~~~~  133 (163)
                      |+||+|+++++++++..||......+. +.........                       ...    ......++.+.+
T Consensus       224 DiwslG~il~el~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (371)
T 4exu_A          224 DIWSVGCIMAEMLTGKTLFKGKDYLDQ-LTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAAD  302 (371)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHH
Confidence            999999999999999888764432221 1111110000                       000    001124678999


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+.+||+.||++|||+.++++
T Consensus       303 li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          303 LLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHCCCChhhcCCHHHHhc
Confidence            999999999999999999986

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=2.6e-31  Score=195.67  Aligned_cols=149  Identities=19%  Similarity=0.209  Sum_probs=102.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-----CCeEECccccccccCCCCCc-ccccCccccccccCcccccc--
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-----HVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTT--   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-----~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~--   73 (163)
                      ||+.||+|||   +.+++||||||+||+++.+     ..++|+|||+++........ .......||+.|+|||.+.+  
T Consensus       126 qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~  202 (432)
T 3p23_A          126 QTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC  202 (432)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC-
T ss_pred             HHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhccc
Confidence            7899999999   8999999999999999532     35789999999776543221 12223468999999999973  


Q ss_pred             -CCCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHH
Q 043958           74 -GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV  152 (163)
Q Consensus        74 -~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i  152 (163)
                       ..++.++||||+||++++++++..+++........ ..................+..+.+++.+||+.||++|||+.++
T Consensus       203 ~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ev  281 (432)
T 3p23_A          203 KENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA-NILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHV  281 (432)
T ss_dssp             --CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHH-HHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             ccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHH-HHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHH
Confidence             55778999999999999999944444433222111 1111111001111223456678999999999999999999999


Q ss_pred             HH
Q 043958          153 AK  154 (163)
Q Consensus       153 ~~  154 (163)
                      ++
T Consensus       282 l~  283 (432)
T 3p23_A          282 LK  283 (432)
T ss_dssp             HT
T ss_pred             Hh
Confidence            84

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.97  E-value=1.7e-32  Score=195.25  Aligned_cols=147  Identities=22%  Similarity=0.329  Sum_probs=94.0

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccc----ccCCC
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYV----TTGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~----~~~~~   76 (163)
                      |++.||.|||   +. +++||||||+||+++.++.+||+|||++..........   ...++..|+|||.+    .+..+
T Consensus       133 ~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~  206 (327)
T 3aln_A          133 ATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKT---RDAGCRPYMAPERIDPSASRQGY  206 (327)
T ss_dssp             HHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------------------------------C
T ss_pred             HHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccccc---cCCCCccccCceeeccccCcCCC
Confidence            7899999999   77 99999999999999999999999999997665433221   23588899999998    45568


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhc-ccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC-IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+.......+.+......... .........+..+.+++.+||+.||++|||+.++++
T Consensus       207 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          207 DVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            899999999999999999988876433322222222222111 111112235678999999999999999999999976

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=3.6e-32  Score=193.94  Aligned_cols=148  Identities=18%  Similarity=0.265  Sum_probs=106.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++...........  ...++..|+|||.+.+. .++.++
T Consensus       132 qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~~~~~~  206 (331)
T 4aaa_A          132 QIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYD--DEVATRWYRAPELLVGDVKYGKAV  206 (331)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHH
T ss_pred             HHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccC--CCcCCccccCcccccCCCCcchHH
Confidence            7899999999   89999999999999999999999999999976654332221  33588899999998875 688999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhh--------------------------cccchhhHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL--------------------------CIQSSEKDKQVQAFVEL  134 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~l  134 (163)
                      |+||+|+++++++++..||........+.........                          ..........+..+.++
T Consensus       207 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  286 (331)
T 4aaa_A          207 DVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDL  286 (331)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHH
Confidence            9999999999999998887654433222111100000                          00000112346789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||+.||++|||+.++++
T Consensus       287 i~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          287 AKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHhccCcccCCCHHHHhc
Confidence            99999999999999999886

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=3.8e-32  Score=193.79  Aligned_cols=147  Identities=15%  Similarity=0.162  Sum_probs=104.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-----CCCCeEECccccccccCCCCCcccccCccccccccCccccccC-C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-----EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-D   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~   75 (163)
                      |++.||+|||   +.+++||||||+||+++     ..+.+||+|||++...........  ...++..|+|||.+.+. .
T Consensus       140 ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~--~~~~t~~y~aPE~~~~~~~  214 (329)
T 3gbz_A          140 QLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFT--HEIITLWYRPPEILLGSRH  214 (329)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCC
T ss_pred             HHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccC--CCcCCccccCHHHhcCCCC
Confidence            7899999999   89999999999999994     455699999999977653322221  33578899999999874 4


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhccc--------------------------chhhHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ--------------------------SSEKDKQVQ  129 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~  129 (163)
                      ++.++||||+|+++++++++..||......+.+.. +......+.                          .......+.
T Consensus       215 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (329)
T 3gbz_A          215 YSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFK-IFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDD  293 (329)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH-HHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHH-HHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCH
Confidence            89999999999999999999888765443322211 111000000                          000111457


Q ss_pred             HHHHHHHhccccCcCCCCCHHHHHH
Q 043958          130 AFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       130 ~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+.+|+.+||+.||++|||+.++++
T Consensus       294 ~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          294 EGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhC
Confidence            8899999999999999999999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.97  E-value=3.4e-32  Score=192.76  Aligned_cols=146  Identities=24%  Similarity=0.353  Sum_probs=105.6

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCC
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~   75 (163)
                      |++.||.|||   .+ +++|+||||+||+++.++.++|+|||++..........   ...++..|+|||.+.     ...
T Consensus       132 ~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~  205 (318)
T 2dyl_A          132 AIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD---RSAGCAAYMAPERIDPPDPTKPD  205 (318)
T ss_dssp             HHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------------CCTTCCHHHHC--------
T ss_pred             HHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcccc---ccCCCccccChhhcccccccccC
Confidence            7899999999   75 99999999999999999999999999987654433221   235888999999985     456


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++||||+|+++++++++..|+.......+.......... ...+.....+..+.+++.+||+.||.+|||+.++++
T Consensus       206 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          206 YDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP-PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC-CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC-CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            888999999999999999998887654443334433333321 112222235678999999999999999999999986

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=7.8e-32  Score=188.64  Aligned_cols=144  Identities=26%  Similarity=0.372  Sum_probs=105.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeee---CCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~---~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||++   +.++.++|+|||++..........   ...++..|+|||.+. +.++.
T Consensus       132 qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~t~~y~aPE~~~-~~~~~  204 (285)
T 3is5_A          132 QMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHST---NAAGTALYMAPEVFK-RDVTF  204 (285)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCH
T ss_pred             HHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCc---CcccccCcCChHHhc-cCCCc
Confidence            7899999999   8999999999999999   556889999999997655433222   335889999999875 56889


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..|+... ...+.............. .....++.+.+++.+||+.||++|||+.++++
T Consensus       205 ~~Di~slG~il~~ll~g~~pf~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          205 KCDIWSAGVVMYFLLTGCLPFTGT-SLEEVQQKATYKEPNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             ccCeehHHHHHHHHHhCCCCCCCC-CHHHHHhhhccCCccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999998887543 333333222222211111 11124578899999999999999999999986

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=1.1e-31  Score=192.31  Aligned_cols=146  Identities=20%  Similarity=0.279  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCC-CCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCc-
Q 043958            2 EIANALAYLHVGFP-RPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNE-   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~-~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~-   78 (163)
                      |++.||.|||   + .+++|+||||+||+++.++.++|+|||++.......    .....++..|+|||.+.+. .++. 
T Consensus       159 qi~~~l~~lH---~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~  231 (348)
T 2pml_X          159 SVLNSFSYIH---NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK----IKGSRGTYEFMPPEFFSNESSYNGA  231 (348)
T ss_dssp             HHHHHHHHHH---HTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTE----ECSSCSCGGGCCGGGGSSCCCEEHH
T ss_pred             HHHHHHHHHh---ccCCEeecCCChHhEEEcCCCcEEEecccccccccccc----ccCCCCCcCccCchhhcCCCCCCcc
Confidence            7899999999   7 999999999999999999999999999997664431    1234688999999999877 5666 


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccch---------------hhHHHHHHHHHHHHhccccCc
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS---------------EKDKQVQAFVELAVKCVSESA  143 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~li~~cl~~~p  143 (163)
                      ++|+||+|+++++++++..|+.......+...............               .....+..+.+++.+||+.||
T Consensus       232 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  311 (348)
T 2pml_X          232 KVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNP  311 (348)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSG
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCCh
Confidence            99999999999999999888765544344433333222111100               013456789999999999999


Q ss_pred             CCCCCHHHHHH
Q 043958          144 EDRPTMIDVAK  154 (163)
Q Consensus       144 ~~Rpt~~~i~~  154 (163)
                      ++|||+.++++
T Consensus       312 ~~Rps~~e~l~  322 (348)
T 2pml_X          312 AERITSEDALK  322 (348)
T ss_dssp             GGSCCHHHHHT
T ss_pred             hhCCCHHHHhc
Confidence            99999999986

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=1.7e-31  Score=190.85  Aligned_cols=143  Identities=20%  Similarity=0.275  Sum_probs=113.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +++++|+||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       149 qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~D  223 (335)
T 2owb_A          149 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVD  223 (335)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHHTSCBCTHHH
T ss_pred             HHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccc--cccCCCccccCHHHhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997765433222  2346889999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+... ...+............    ....+..+.+++.+||+.||++|||+.++++
T Consensus       224 i~slG~il~~l~~g~~pf~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          224 VWSIGCIMYTLLVGKPPFETS-CLKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCS-SHHHHHHHHHHTCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHHHHHHCcCCCCCC-CHHHHHHHHhcCCCCC----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999998887543 2333333332322211    1234567899999999999999999999986

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=2.2e-31  Score=187.71  Aligned_cols=145  Identities=22%  Similarity=0.361  Sum_probs=113.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       127 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  201 (303)
T 3a7i_A          127 EILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKR--NTFVGTPFWMAPEVIKQSAYDSKAD  201 (303)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCB--CCCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccccc--CccCCCcCccCHHHHhcCCCCchhh
Confidence            7899999999   8999999999999999999999999999997765433221  2346888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ  155 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~  155 (163)
                      +||+|+++++++++..|+...... +.........   ........+..+.+++.+||+.+|++|||+.++++.
T Consensus       202 i~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          202 IWSLGITAIELARGEPPHSELHPM-KVLFLIPKNN---PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSC---CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             hHHHHHHHHHHccCCCCCCCcCHH-HHHHHhhcCC---CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            999999999999998887543322 2222221111   111122345779999999999999999999999873

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=1.1e-31  Score=192.75  Aligned_cols=149  Identities=17%  Similarity=0.157  Sum_probs=108.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--------cccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--------KDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--------~~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++..........        ......|+..|+|||.+.+
T Consensus       120 qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (353)
T 2b9h_A          120 QTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT  196 (353)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS
T ss_pred             HHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc
Confidence            7899999999   8999999999999999999999999999998765332111        1123468899999998764


Q ss_pred             -CCCCcccceeecchhhHHHhhhccccccccchhhccchhhh--------------------h---hhc-----ccchhh
Q 043958           74 -GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR--------------------E---ELC-----IQSSEK  124 (163)
Q Consensus        74 -~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------------------~---~~~-----~~~~~~  124 (163)
                       ..++.++|+||+|+++++++++..||........+. ....                    .   ...     ......
T Consensus       197 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (353)
T 2b9h_A          197 SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLL-LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMF  275 (353)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH-HHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHS
T ss_pred             CCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHH-HHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhc
Confidence             678999999999999999999988876443221110 0000                    0   000     000011


Q ss_pred             HHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          125 DKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       125 ~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...+..+.+++.+||+.||++|||+.++++
T Consensus       276 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          276 PRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            235678999999999999999999999986

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=2.9e-31  Score=186.31  Aligned_cols=143  Identities=20%  Similarity=0.272  Sum_probs=113.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++|+||||+||+++.++.++++|||++..........  ....++..|+|||.+.+..++.++|
T Consensus       123 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~D  197 (294)
T 2rku_A          123 QIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KVLCGTPNYIAPEVLSKKGHSFEVD  197 (294)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCB--CCCCSCCSSCCHHHHTTSCBCTHHH
T ss_pred             HHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcccc--ccccCCCCcCCcchhccCCCCchhh
Confidence            7899999999   8999999999999999999999999999997765433222  2346888999999998888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+|+++++++++..|+.... ..+............    ....+..+.+++.+||+.||++|||+.++++
T Consensus       198 i~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          198 VWSIGCIMYTLLVGKPPFETSC-LKETYLRIKKNEYSI----PKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSS-HHHHHHHHHTTCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHhhccCCC----ccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            9999999999999988875432 222222222222111    1234567999999999999999999999886

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=1e-31  Score=187.66  Aligned_cols=137  Identities=22%  Similarity=0.282  Sum_probs=105.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-------------------CCeEECccccccccCCCCCcccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-------------------HVAKLFDFSLAESIPDGETHIKDAIPIGI   62 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-------------------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~   62 (163)
                      |++.||+|||   +.+++||||||+||+++.+                   ..++++|||.+.......      ...++
T Consensus       123 qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt  193 (289)
T 1x8b_A          123 QVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQ------VEEGD  193 (289)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCSC------CCCCC
T ss_pred             HHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCcc------ccCCC
Confidence            7899999999   8999999999999999844                   478999999997765432      22488


Q ss_pred             ccccCccccccC-CCCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhcccc
Q 043958           63 MGFVATEYVTTG-DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSE  141 (163)
Q Consensus        63 ~~~~~PE~~~~~-~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~  141 (163)
                      ..|+|||.+.+. .++.++||||+|+++++++++..++........+..    ... .  ......+..+.+++.+||+.
T Consensus       194 ~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~----~~~-~--~~~~~~~~~~~~li~~~l~~  266 (289)
T 1x8b_A          194 SRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ----GRL-P--RIPQVLSQEFTELLKVMIHP  266 (289)
T ss_dssp             GGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHHHHT----TCC-C--CCSSCCCHHHHHHHHHHTCS
T ss_pred             ccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHHHHc----CCC-C--CCCcccCHHHHHHHHHHhCC
Confidence            899999999765 466799999999999999988766544333222221    111 0  11123457899999999999


Q ss_pred             CcCCCCCHHHHHH
Q 043958          142 SAEDRPTMIDVAK  154 (163)
Q Consensus       142 ~p~~Rpt~~~i~~  154 (163)
                      ||++|||+.++++
T Consensus       267 dp~~Rps~~~ll~  279 (289)
T 1x8b_A          267 DPERRPSAMALVK  279 (289)
T ss_dssp             SGGGSCCHHHHHT
T ss_pred             CcccCCCHHHHhh
Confidence            9999999999976

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=1.2e-31  Score=193.27  Aligned_cols=146  Identities=14%  Similarity=0.167  Sum_probs=103.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||.|||   +.+++||||||+||+++.++.++|+|||++..........   ...++..|+|||.+.+ ..++.++
T Consensus       142 qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~~  215 (362)
T 3pg1_A          142 HILLGLHVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKT---HYVTHRWYRAPELVMQFKGFTKLV  215 (362)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHH
T ss_pred             HHHHHHHHHH---HCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccc---eecccceecCcHHhcCCCCCCcHh
Confidence            7899999999   8999999999999999999999999999997544333222   3358889999999876 5689999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhccc----------------------------chhhHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ----------------------------SSEKDKQVQAFV  132 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~  132 (163)
                      |+||+|+++++++++..|+...... +....+......+.                            .......++.+.
T Consensus       216 DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (362)
T 3pg1_A          216 DMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVAL  294 (362)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHH
T ss_pred             HHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHH
Confidence            9999999999999998887643322 22221111000000                            001112356799


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+||+.||++|||+.++++
T Consensus       295 ~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          295 DLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhcCChhhCCCHHHHHc
Confidence            9999999999999999999986

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=2.2e-31  Score=189.32  Aligned_cols=145  Identities=19%  Similarity=0.299  Sum_probs=105.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++.........  .....++..|+|||.+.     +..+
T Consensus       137 qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~  211 (326)
T 2x7f_A          137 EILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGR--RNTFIGTPYWMAPEVIACDENPDATY  211 (326)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCTTTC---------------CCGGGCCHHHHC--------C
T ss_pred             HHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccc--cccccCCccccChhhhccccccCcCC
Confidence            7899999999   899999999999999999999999999998765433221  12346889999999987     4568


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+........ ........  .........+..+.+++.+||..||++|||+.++++
T Consensus       212 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          212 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNP--APRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             CTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH-HHHHHHSC--CCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             CccchHHHHHHHHHHHHhCCCCCCCCcHHHH-HHHhhcCc--cccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            8999999999999999999888754433222 11111111  111112234578999999999999999999999987

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=2.9e-31  Score=185.79  Aligned_cols=150  Identities=20%  Similarity=0.262  Sum_probs=116.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC---CCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED---HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~---~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||.|||   +.+++|+||||+||+++.+   +.++++|||++..........   ...++..|+|||.+.+ .++.
T Consensus       129 qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~-~~~~  201 (287)
T 2wei_A          129 QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMK---DRIGTAYYIAPEVLRG-TYDE  201 (287)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCS---CHHHHHTTCCHHHHTT-CCCT
T ss_pred             HHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccc---cccCcccccChHHhcC-CCCC
Confidence            7899999999   8999999999999999654   469999999987665433221   2357889999998764 5889


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH--HH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK--QL  156 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~--~L  156 (163)
                      ++|+||+|+++++++++..|+... ...++.............+.....+..+.+++.+||+.+|++|||+.++++  ++
T Consensus       202 ~~Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~  280 (287)
T 2wei_A          202 KCDVWSAGVILYILLSGTPPFYGK-NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI  280 (287)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred             chhhHhHHHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHH
Confidence            999999999999999998887643 333344444444333333334456788999999999999999999999998  55


Q ss_pred             HHH
Q 043958          157 RQA  159 (163)
Q Consensus       157 ~~~  159 (163)
                      ++.
T Consensus       281 ~~~  283 (287)
T 2wei_A          281 QKY  283 (287)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=3e-31  Score=190.69  Aligned_cols=144  Identities=17%  Similarity=0.195  Sum_probs=107.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      |++.||+|||   +.+++||||||+||+++.++.++|+|||++.......     ....++..|+|||.+.+ ..++.++
T Consensus       134 qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~  205 (353)
T 3coi_A          134 QMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM-----TGYVVTRWYRAPEVILSWMHYNQTV  205 (353)
T ss_dssp             HHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTH
T ss_pred             HHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCc-----cccccCcCcCCHHHHhCcCCCCchh
Confidence            7899999999   8999999999999999999999999999987654321     13357889999999876 5688999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhh--------------------------cc-cchhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL--------------------------CI-QSSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~-~~~~~~~~~~~~~~  133 (163)
                      |+||+|+++++++++..||......+ .+..+.....                          .. ........++.+.+
T Consensus       206 Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (353)
T 3coi_A          206 DIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAAD  284 (353)
T ss_dssp             HHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHH
Confidence            99999999999999988876443222 1111111000                          00 00011234678999


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.+||+.||++|||+.++++
T Consensus       285 li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          285 LLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHcCCCcccCCCHHHHhc
Confidence            999999999999999999985

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.96  E-value=6.6e-32  Score=194.54  Aligned_cols=144  Identities=17%  Similarity=0.271  Sum_probs=108.4

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   +. +++|+||||+||+++.++.++|+|||++........    ....++..|+|||.+.+..++.++
T Consensus       139 ~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~  211 (360)
T 3eqc_A          139 AVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQS  211 (360)
T ss_dssp             HHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC--------CCCCTTCCHHHHTTCCCSHHH
T ss_pred             HHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccc----cCCCCCCCeECHHHHcCCCCCchh
Confidence            7899999999   75 899999999999999999999999999865532211    133688999999999988899999


Q ss_pred             ceeecchhhHHHhhhccccccccchhh-----------------------------------------ccchhhhhhhcc
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDE-----------------------------------------IVDPVIREELCI  119 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~~  119 (163)
                      |+||+|+++++++++..||........                                         ..+......  .
T Consensus       212 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  289 (360)
T 3eqc_A          212 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP--P  289 (360)
T ss_dssp             HHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSC--C
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccC--C
Confidence            999999999999999988754322110                                         000000000  0


Q ss_pred             cchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          120 QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       120 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ........+..+.+|+.+||+.||++|||+.++++
T Consensus       290 ~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          290 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            01111124568999999999999999999999987

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.96  E-value=4.6e-31  Score=183.69  Aligned_cols=142  Identities=20%  Similarity=0.278  Sum_probs=104.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++..........   ...++..|+|||.+.+..+ +.++
T Consensus       119 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~---~~~~~~~y~aPE~~~~~~~~~~~~  192 (276)
T 2h6d_A          119 QILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLR---TSCGSPNYAAPEVISGRLYAGPEV  192 (276)
T ss_dssp             HHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----------------CCTGGGTTSCCCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCccee---cccCCccccCHHHHcCCCCCCccc
Confidence            7899999999   8999999999999999999999999999997665433221   3358889999999987765 5799


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+||+|+++++++++..|+... ........+.......    ....+..+.+++.+||+.||++|||+.++++
T Consensus       193 Di~slG~~l~~l~~g~~p~~~~-~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          193 DIWSCGVILYALLCGTLPFDDE-HVPTLFKKIRGGVFYI----PEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCC-cHHHHHHHhhcCcccC----chhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            9999999999999998876533 3333333332222111    1234567999999999999999999999987

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=1.4e-31  Score=190.29  Aligned_cols=135  Identities=19%  Similarity=0.236  Sum_probs=107.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Ccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~   79 (163)
                      |++.||+|||   +.+++||||||+||+++ .++.+||+|||++.........    ...++..|+|||.+.+..+ +.+
T Consensus       157 qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~  229 (320)
T 3a99_A          157 QVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT----DFDGTRVYSPPEWIRYHRYHGRS  229 (320)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBC----CCCSCGGGSCHHHHHHSCBCHHH
T ss_pred             HHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccccc----CCCCCccCCChHHhccCCCCCcc
Confidence            7899999999   89999999999999998 7789999999999776543221    3358899999999887765 678


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+|+++++++++..|+.....   .    .......    ....+..+.+++.+||+.||++|||+.++++
T Consensus       230 ~Di~slG~il~el~~g~~pf~~~~~---~----~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          230 AAVWSLGILLYDMVCGDIPFEHDEE---I----IRGQVFF----RQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCSHHH---H----HHCCCCC----SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             chHHhHHHHHHHHHHCCCCCCChhh---h----hcccccc----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999888753221   1    1111111    1234567999999999999999999999986

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=9.5e-32  Score=189.22  Aligned_cols=149  Identities=19%  Similarity=0.321  Sum_probs=107.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc---ccccCccccccccCcccccc-CCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH---IKDAIPIGIMGFVATEYVTT-GDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~-~~~~   77 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++|+|||++.........   .......++..|+|||.+.+ ..++
T Consensus       129 qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  205 (303)
T 2vwi_A          129 EVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYD  205 (303)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCC
T ss_pred             HHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCC
Confidence            7899999999   899999999999999999999999999998766543211   11123468889999998875 4688


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcc------cchhhHHHHHHHHHHHHhccccCcCCCCCHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI------QSSEKDKQVQAFVELAVKCVSESAEDRPTMID  151 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~  151 (163)
                      .++|+||+|+++++++++..|+........... ........      ........+..+.+++.+||+.||++|||+.+
T Consensus       206 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~  284 (303)
T 2vwi_A          206 FKADIWSFGITAIELATGAAPYHKYPPMKVLML-TLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAE  284 (303)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHH-HHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCccCchhhHHHH-HhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHH
Confidence            999999999999999999888765433322211 11111000      00011234567999999999999999999999


Q ss_pred             HHH
Q 043958          152 VAK  154 (163)
Q Consensus       152 i~~  154 (163)
                      +++
T Consensus       285 ll~  287 (303)
T 2vwi_A          285 LLR  287 (303)
T ss_dssp             HHT
T ss_pred             Hhh
Confidence            986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=6.4e-31  Score=186.18  Aligned_cols=149  Identities=14%  Similarity=0.182  Sum_probs=107.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCc-ccccCccccccccCcccccc-CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTT-GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~-~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++ .++.+||+|||++......... .......++..|+|||.+.+ ..++.
T Consensus       128 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  204 (320)
T 2i6l_A          128 QLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTK  204 (320)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred             HHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCc
Confidence            7899999999   89999999999999997 5678999999999766432211 11123356888999998865 56889


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhh----------------------ccc----chhhHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL----------------------CIQ----SSEKDKQVQAFV  132 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~----~~~~~~~~~~~~  132 (163)
                      ++|+||+|+++++++++..|+....... ..........                      ...    .......+..+.
T Consensus       205 ~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (320)
T 2i6l_A          205 AIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAV  283 (320)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHH
T ss_pred             hhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHH
Confidence            9999999999999999988876443322 1111111100                      000    001123467899


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +++.+||+.||++|||+.++++
T Consensus       284 ~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          284 DFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHcCCCccccCCHHHHhC
Confidence            9999999999999999999986

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=7.9e-32  Score=189.71  Aligned_cols=146  Identities=19%  Similarity=0.273  Sum_probs=108.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      |++.||.|||   +.+++|+||||+||+++.++.++++|||++........  ......++..|+|||.+.     +..+
T Consensus       125 ~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~  199 (302)
T 2j7t_A          125 QMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ--KRDSFIGTPYWMAPEVVMCETMKDTPY  199 (302)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH--C-----CCGGGCCHHHHHHHHTTSTTT
T ss_pred             HHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc--ccccccCChhhcCCeeeccccCCCCCC
Confidence            7899999999   89999999999999999999999999998753321110  111235888999999883     5678


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++|+||+|+++++++++..|+....... .......... .........+..+.+++.+||+.||++|||+.++++
T Consensus       200 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          200 DYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDP-PTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCC-CCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             chhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCC-cccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            899999999999999999988876443322 2222222211 112223345678999999999999999999999875

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=1.1e-31  Score=187.13  Aligned_cols=146  Identities=17%  Similarity=0.253  Sum_probs=111.6

Q ss_pred             hHHHHHHHHhcCCCCC-----eEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC
Q 043958            2 EIANALAYLHVGFPRP-----IVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~-----~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~   76 (163)
                      |++.||+|||   +.+     ++|+||||+||+++.++.++|+|||++..........  ....++..|+|||.+.+..+
T Consensus       119 ~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~  193 (279)
T 2w5a_A          119 QLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KTFVGTPYYMSPEQMNRMSY  193 (279)
T ss_dssp             HHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CHHH--HHHHSCCTTCCHHHHHCC-C
T ss_pred             HHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccccc--cccCCCccccChHHhccCCC
Confidence            7899999999   777     9999999999999999999999999997765432211  12357889999999988889


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL  156 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L  156 (163)
                      +.++|+||+|+++++++++..|+... ...++...+..+...   ......+..+.+++.+||+.+|++|||+.++++.+
T Consensus       194 ~~~~Di~slG~il~~l~~g~~p~~~~-~~~~~~~~i~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          194 NEKSDIWSLGCLLYELCALMPPFTAF-SQKELAGKIREGKFR---RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             CchhhHHHHHHHHHHHHHCCCCCccc-CHHHHHHHHhhcccc---cCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            99999999999999999998776543 333333333333211   11224567899999999999999999999998754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.96  E-value=2.6e-30  Score=182.82  Aligned_cols=135  Identities=21%  Similarity=0.264  Sum_probs=107.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCC-cc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN-EK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~-~~   79 (163)
                      |++.||.|||   +.+++|+||||+||+++ .++.++|+|||++.........    ...++..|+|||.+.+..+. .+
T Consensus       147 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~~~----~~~~~~~y~aPE~~~~~~~~~~~  219 (312)
T 2iwi_A          147 QVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT----DFDGTRVYSPPEWISRHQYHALP  219 (312)
T ss_dssp             HHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSCBC----CCCSCTTTSCHHHHHHSCBCHHH
T ss_pred             HHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCccc----ccCCcccccCceeeecCCCCCcc
Confidence            7899999999   89999999999999998 8899999999999776543321    33588899999998877664 48


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+||+|+++++++++..|+....   +.    ......    .....+..+.+++.+||+.+|++|||+.++++
T Consensus       220 ~Di~slG~il~~l~~g~~pf~~~~---~~----~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          220 ATVWSLGILLYDMVCGDIPFERDQ---EI----LEAELH----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCSHH---HH----HHTCCC----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             chHHHHHHHHHHHHHCCCCCCChH---HH----hhhccC----CcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999988875322   11    111111    11234567999999999999999999999987

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=6e-29  Score=190.01  Aligned_cols=153  Identities=17%  Similarity=0.211  Sum_probs=111.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC---eEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV---AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~---~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.++.   ++++|||++..........   ...++..|+|||.+.+..++.
T Consensus       129 QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~---~~~gt~~Y~APE~l~~~~~s~  202 (676)
T 3qa8_A          129 DISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCT---EFVGTLQYLAPELLEQKKYTV  202 (676)
T ss_dssp             HHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCC---CCCSCCTTCSSCSSCCSCCST
T ss_pred             HHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccc---cccCCcccCChHHhccCCCCc
Confidence            7899999999   899999999999999987765   8999999998765443322   346889999999999889999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhh-------------ccchhhhhh------hcccchhhHHHHHHHHHHHHhcc
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDE-------------IVDPVIREE------LCIQSSEKDKQVQAFVELAVKCV  139 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~-------------~~~~~~~~~------~~~~~~~~~~~~~~~~~li~~cl  139 (163)
                      ++|+||+|++++++++|..||........             .......+.      ...+.......+..+.+++.+||
T Consensus       203 ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL  282 (676)
T 3qa8_A          203 TVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCML  282 (676)
T ss_dssp             THHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHS
T ss_pred             hhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHc
Confidence            99999999999999999988764322111             111111111      01111223346788999999999


Q ss_pred             ccCcCCCCCHHH-----HHHHHHHHh
Q 043958          140 SESAEDRPTMID-----VAKQLRQAY  160 (163)
Q Consensus       140 ~~~p~~Rpt~~~-----i~~~L~~~~  160 (163)
                      ..||++|||+.+     ..+.++.+.
T Consensus       283 ~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          283 MWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             CSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             cCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence            999999999987     445555544

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.95  E-value=2.9e-28  Score=188.25  Aligned_cols=137  Identities=23%  Similarity=0.311  Sum_probs=106.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++|+||||||+||+++.+ .+||+|||++......      ....||+.|+|||.+.++ ++.++|
T Consensus       190 qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sD  258 (681)
T 2pzi_A          190 EILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF------GYLYGTPGFQAPEIVRTG-PTVATD  258 (681)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC------SCCCCCTTTSCTTHHHHC-SCHHHH
T ss_pred             HHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcccC------CccCCCccccCHHHHcCC-CCCcee
Confidence            7899999999   8999999999999999886 8999999999776543      134689999999988765 488999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-HHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-MIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-~~~i~~~L~~~~  160 (163)
                      |||||+++++++++..++.. .....+.          ........+..+.+++.+||+.||++||+ ++++.+.|..+.
T Consensus       259 i~slG~~l~~l~~g~~~~~~-~~~~~~~----------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          259 IYTVGRTLAALTLDLPTRNG-RYVDGLP----------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             HHHHHHHHHHHHSCCCEETT-EECSSCC----------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHhCCCCCcc-ccccccc----------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence            99999999999998666542 1111110          11112234578999999999999999995 666776776653

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.94  E-value=3e-28  Score=171.48  Aligned_cols=126  Identities=18%  Similarity=0.297  Sum_probs=95.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      |++.||+|||   +.+++||||||+||+++.   ++.++|+|||++....                        +..++.
T Consensus       125 qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~------------------------~~~~~~  177 (299)
T 3m2w_A          125 SIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT------------------------GEKYDK  177 (299)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT------------------------TCGGGG
T ss_pred             HHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc------------------------cccCCc
Confidence            7899999999   899999999999999988   7889999999874332                        134678


Q ss_pred             ccceeecchhhHHHhhhccccccccchh---hccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFD---EIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++|+||+|+++++++++..||.......   .....................+..+.+++.+||+.||++|||+.++++
T Consensus       178 ~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          178 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            8999999999999999988875433221   112222222222222233456788999999999999999999999987

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.93  E-value=3.4e-27  Score=168.55  Aligned_cols=137  Identities=10%  Similarity=0.141  Sum_probs=100.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC--------------------CeEECccccccccCCCCCcccccCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--------------------VAKLFDFSLAESIPDGETHIKDAIPIG   61 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~--------------------~~~l~dfg~~~~~~~~~~~~~~~~~~~   61 (163)
                      ||+.||+|||.  +.+|+||||||+|||++.++                    .+||+|||+++.....       ...|
T Consensus       169 qi~~aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~g  239 (336)
T 2vuw_A          169 QLTASLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVF  239 (336)
T ss_dssp             HHHHHHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEEC
T ss_pred             HHHHHHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEE
Confidence            79999999993  37899999999999999887                    8999999999766532       2368


Q ss_pred             cccccCccccccCCCCcccceeecchh-hHHHhhhccccccccchhhccchhh---hhhhcccchhhHHHHHHHHHHHHh
Q 043958           62 IMGFVATEYVTTGDYNEKCDVFSFAGD-RHWLLNRVKKHIECNTFDEIVDPVI---REELCIQSSEKDKQVQAFVELAVK  137 (163)
Q Consensus        62 ~~~~~~PE~~~~~~~~~~~Dv~s~g~~-~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~li~~  137 (163)
                      |..|+|||.+.+.. +.++||||++++ .++++.+..|+..........+...   ..............++++.+|+.+
T Consensus       240 t~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~  318 (336)
T 2vuw_A          240 CDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRT  318 (336)
T ss_dssp             CCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHH
T ss_pred             eecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHH
Confidence            89999999998665 889999998776 5556667666543211122222211   111112233455788999999999


Q ss_pred             ccccCcCCCCCHHHHH
Q 043958          138 CVSESAEDRPTMIDVA  153 (163)
Q Consensus       138 cl~~~p~~Rpt~~~i~  153 (163)
                      ||+.|     |+.+++
T Consensus       319 ~L~~d-----sa~e~l  329 (336)
T 2vuw_A          319 MLNFS-----SATDLL  329 (336)
T ss_dssp             GGGSS-----SHHHHH
T ss_pred             HhccC-----CHHHHH
Confidence            99976     888887

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.93  E-value=6.2e-27  Score=164.01  Aligned_cols=127  Identities=13%  Similarity=0.011  Sum_probs=97.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+||+++.++.+++++++                      |++       +++.++|
T Consensus       137 ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~----------------------~~~-------~~~~~~D  184 (286)
T 3uqc_A          137 SLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA----------------------TMP-------DANPQDD  184 (286)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------------------CCT-------TCCHHHH
T ss_pred             HHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------------------ccC-------CCCchhH
Confidence            7899999999   8999999999999999999999997443                      223       3688999


Q ss_pred             eeecchhhHHHhhhccccccccchhhcc--chhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIV--DPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |||+|+++|++++|..||........+.  ..................+..+.+++.+||+.||++| |+.++++.|+++
T Consensus       185 i~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~  263 (286)
T 3uqc_A          185 IRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA  263 (286)
T ss_dssp             HHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence            9999999999999998887544332211  1111222111112223456789999999999999999 999999999987


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      ..
T Consensus       264 ~~  265 (286)
T 3uqc_A          264 TA  265 (286)
T ss_dssp             HC
T ss_pred             hc
Confidence            54

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.88  E-value=3.1e-24  Score=162.66  Aligned_cols=91  Identities=13%  Similarity=0.074  Sum_probs=60.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|+|   +++|+||||||+|||++.+|.+||+|||+++.........  ....||+.||+||.+.+ .+..++|
T Consensus       347 QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~--~t~vGTp~YmAPE~l~g-~~~~~~d  420 (569)
T 4azs_A          347 SLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWP--TNLVQSFFVFVNELFAE-NKSWNGF  420 (569)
T ss_dssp             HHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCS--HHHHHHHHHHHHHHC----------
T ss_pred             HHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccc--cCceechhhccHHHhCC-CCCCccc
Confidence            8999999999   8999999999999999999999999999998765543322  23469999999998874 4667899


Q ss_pred             eeecchhhHHHhhhccc
Q 043958           82 VFSFAGDRHWLLNRVKK   98 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~   98 (163)
                      +||+|++.+.+..+..+
T Consensus       421 ~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          421 WRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             --------CCCCTTHHH
T ss_pred             ccccccchhhhccccch
Confidence            99999988776554433

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.67  E-value=1.2e-18  Score=131.44  Aligned_cols=90  Identities=16%  Similarity=0.177  Sum_probs=70.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-----cccCccccccccCcccccc--C
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-----KDAIPIGIMGFVATEYVTT--G   74 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~PE~~~~--~   74 (163)
                      |+++||.|||   +++++||||||+|||++.  .+||+|||+++.........     ......||+.|||||.+..  .
T Consensus       439 qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~  513 (540)
T 3en9_A          439 KIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLE  513 (540)
T ss_dssp             HHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHH
Confidence            7899999999   899999999999999998  99999999998776543221     1124568999999999976  5


Q ss_pred             CCCcccceeecchhhHHHhhhc
Q 043958           75 DYNEKCDVFSFAGDRHWLLNRV   96 (163)
Q Consensus        75 ~~~~~~Dv~s~g~~~~~l~~~~   96 (163)
                      .|+..+|+|+..+-..+-+...
T Consensus       514 ~Y~~~~d~ws~vl~~l~~v~~r  535 (540)
T 3en9_A          514 GYKSVYDRWEIILELMKDVERR  535 (540)
T ss_dssp             HHHHHCTTHHHHHHHHHHHHTC
T ss_pred             HHHHHHhHHHHHHHHHHHHHhc
Confidence            5788899998765544444433

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.46  E-value=5e-15  Score=103.39  Aligned_cols=52  Identities=17%  Similarity=0.153  Sum_probs=45.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT   72 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~   72 (163)
                      |++.||.|||   +.+++||||||+||+++ ++.++|+|||++..               +..+++||++.
T Consensus       201 qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl~DFG~a~~---------------~~~~~a~e~l~  252 (282)
T 1zar_A          201 MILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWIIDFPQSVE---------------VGEEGWREILE  252 (282)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred             HHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence            7899999999   89999999999999999 99999999999842               33457788764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.16  E-value=3.8e-11  Score=82.68  Aligned_cols=42  Identities=12%  Similarity=0.254  Sum_probs=37.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      |++.||.|||.  ..+++||||||.|||++.  .++|+|||++...
T Consensus       178 qi~~~l~~lH~--~~givHrDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          178 DVVENVKRLYQ--EAELVHADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHHHHHHHHH--TSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             HHHHHHHHHHH--HCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence            78999999994  469999999999999988  8999999998554

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.73  E-value=5.2e-09  Score=75.79  Aligned_cols=43  Identities=14%  Similarity=0.247  Sum_probs=37.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC----------eEECcccccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV----------AKLFDFSLAESI   47 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~----------~~l~dfg~~~~~   47 (163)
                      |++.+|.+||   ..+++||||||.|||++.++.          +.|+||+-+...
T Consensus       213 qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          213 DLIALILRLA---KHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             HHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence            7899999999   889999999999999987763          789999976443

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.74  E-value=1.7e-05  Score=53.89  Aligned_cols=27  Identities=11%  Similarity=0.261  Sum_probs=24.2

Q ss_pred             eEeccCCCCCeeeCCCCCeEECccccc
Q 043958           18 IVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        18 ~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ++|+|++|.||+++.++.+.++||+.+
T Consensus       186 l~HgDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             EECCCCCCCcEEEECCcEEEEEcchhc
Confidence            999999999999987766779999976

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.55  E-value=3.5e-05  Score=52.63  Aligned_cols=29  Identities=14%  Similarity=0.234  Sum_probs=24.7

Q ss_pred             CCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           16 RPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..++|+|+++.||+++.++.+.|+||+.+
T Consensus       183 ~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             ceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence            45899999999999987666679999865

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.28  E-value=0.00015  Score=51.84  Aligned_cols=31  Identities=19%  Similarity=0.439  Sum_probs=26.2

Q ss_pred             CCeEeccCCCCCeeeCCCCC--eEECccccccc
Q 043958           16 RPIVFKNIKLSSILFDEDHV--AKLFDFSLAES   46 (163)
Q Consensus        16 ~~~~H~dik~~nil~~~~~~--~~l~dfg~~~~   46 (163)
                      ..++|+|+++.||+++.++.  +.+.||+.+..
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence            57899999999999987753  68999998753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=96.60  E-value=0.0016  Score=45.85  Aligned_cols=30  Identities=10%  Similarity=0.201  Sum_probs=27.2

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ...++|+|+.+.||+++.++.+.++||+.+
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            578999999999999988888999999876

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.10  E-value=0.0045  Score=45.29  Aligned_cols=32  Identities=9%  Similarity=0.259  Sum_probs=27.7

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI   47 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~   47 (163)
                      ...++|+|+++.||+++.++ +.++||+.+...
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G  262 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYG  262 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEE
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccC
Confidence            67899999999999998877 999999887443

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=95.65  E-value=0.0055  Score=41.79  Aligned_cols=28  Identities=18%  Similarity=0.393  Sum_probs=24.8

Q ss_pred             CeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           17 PIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        17 ~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      .++|+|+.+.||+++.++.+-|+||+.+
T Consensus       194 ~l~HGDl~~~Nil~~~~~~~~viDwe~a  221 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGKLIGCIDVGRV  221 (272)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEEcCCCCCCeEEEECCeEEEEEECccc
Confidence            4799999999999998877789999876

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=95.64  E-value=0.0037  Score=43.58  Aligned_cols=33  Identities=21%  Similarity=0.362  Sum_probs=27.3

Q ss_pred             CCCeEeccCCCCCeeeCC--CCCeEECcccccccc
Q 043958           15 PRPIVFKNIKLSSILFDE--DHVAKLFDFSLAESI   47 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~--~~~~~l~dfg~~~~~   47 (163)
                      ...++|+|+++.||+++.  .+.+.++||+.+...
T Consensus       190 ~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~  224 (304)
T 3sg8_A          190 YPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS  224 (304)
T ss_dssp             CCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred             CceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence            357899999999999988  566789999987543

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=95.00  E-value=0.008  Score=42.09  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=25.6

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ...++|+|+.+.||+++.++.+.++||+.+
T Consensus       186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a  215 (322)
T 2ppq_A          186 PAGVIHADLFQDNVFFLGDELSGLIDFYFA  215 (322)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             CcccCCCCCCccCEEEeCCceEEEecchhc
Confidence            357899999999999988766689999866

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=94.91  E-value=0.011  Score=41.65  Aligned_cols=33  Identities=15%  Similarity=0.194  Sum_probs=27.7

Q ss_pred             CCCeEeccCCCCCeeeCCC----CCeEECcccccccc
Q 043958           15 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAESI   47 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~----~~~~l~dfg~~~~~   47 (163)
                      ...++|+|+.+.||+++.+    +.+.++||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            4679999999999999874    67899999987543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=94.87  E-value=0.0085  Score=42.62  Aligned_cols=31  Identities=6%  Similarity=0.383  Sum_probs=25.9

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.||+++.+..+.|+||+.+.
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred             CceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence            4578999999999999865557899998773

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=94.84  E-value=0.013  Score=40.96  Aligned_cols=30  Identities=13%  Similarity=0.234  Sum_probs=25.0

Q ss_pred             CCCeEeccCCCCCeeeCC---CCC-eEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDE---DHV-AKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~---~~~-~~l~dfg~~   44 (163)
                      ...++|+|+++.|++++.   ++. +.|+||+.+
T Consensus       189 ~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a  222 (306)
T 3tdw_A          189 TPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDA  222 (306)
T ss_dssp             CCEEECSCCSGGGEEECTTCSSCCEEEECCCTTC
T ss_pred             CCeeEeCCCCcccEEEecCCCCCceEEEEehhhc
Confidence            567899999999999987   344 479999876

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=94.00  E-value=0.023  Score=39.87  Aligned_cols=30  Identities=17%  Similarity=0.184  Sum_probs=25.2

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      ...++|+|+++.||+++ + .+.++||+.+..
T Consensus       194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence            45689999999999998 4 789999987643

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=93.63  E-value=0.25  Score=33.01  Aligned_cols=63  Identities=16%  Similarity=-0.098  Sum_probs=36.4

Q ss_pred             ccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccceeecchhhHHHhhhcccc
Q 043958           21 KNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKH   99 (163)
Q Consensus        21 ~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~s~g~~~~~l~~~~~~~   99 (163)
                      +=+.|..|++..+|.+...+ +.+       .       .....+.|||... ...+.+.-|||+|+++|+-+.+..+.
T Consensus        74 ~i~~~~~i~l~~dG~V~f~~-~~s-------~-------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e  136 (229)
T 2yle_A           74 RVRSAAQIRVWRDGAVTLAP-AAD-------D-------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE  136 (229)
T ss_dssp             CCCSGGGEEEETTSCEEECC-C--------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT
T ss_pred             eecCCcceEEecCCceeccc-ccc-------c-------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc
Confidence            33456788889999887653 111       0       0112355787653 23456778999999999988776654

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=93.46  E-value=0.04  Score=39.42  Aligned_cols=30  Identities=13%  Similarity=0.286  Sum_probs=24.4

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.||+++.++ +.++||..+.
T Consensus       211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            35689999999999998665 8899998763

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=93.39  E-value=0.031  Score=39.68  Aligned_cols=31  Identities=10%  Similarity=0.228  Sum_probs=27.0

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.||+++.++.+.++||+.+.
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            3578999999999999988889999998663

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=93.02  E-value=0.051  Score=39.26  Aligned_cols=31  Identities=19%  Similarity=0.295  Sum_probs=25.9

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      ...++|+|+.+.||+++.++ +.+.||..+..
T Consensus       226 ~~~L~HGDl~~~Nil~~~~~-~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGSIFASEHE-TKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred             CCceeeCCCCcCcEEEeCCC-eEEEeCccccc
Confidence            46889999999999998764 88999987643

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=92.87  E-value=0.044  Score=40.27  Aligned_cols=19  Identities=16%  Similarity=0.398  Sum_probs=15.7

Q ss_pred             CCCeEeccCCCCCeeeCCC
Q 043958           15 PRPIVFKNIKLSSILFDED   33 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~   33 (163)
                      ...++|+|+.+.||+++.+
T Consensus       248 ~~v~~H~Dl~~gNiL~~~~  266 (429)
T 1nw1_A          248 PVTFCHNDLQEGNILLPKA  266 (429)
T ss_dssp             CEEEECSCCCGGGEEEEC-
T ss_pred             CeEEEeCCCCCCeEEeeCC
Confidence            3468999999999999775

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=92.82  E-value=0.063  Score=39.86  Aligned_cols=17  Identities=18%  Similarity=0.215  Sum_probs=15.1

Q ss_pred             CCCeEeccCCCCCeeeC
Q 043958           15 PRPIVFKNIKLSSILFD   31 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~   31 (163)
                      ...++|+|+.+.||+++
T Consensus       289 ~~v~cHnDl~~gNIL~~  305 (458)
T 2qg7_A          289 PIVLCHCDLLSSNIINT  305 (458)
T ss_dssp             CEEEECSCCCGGGEEEC
T ss_pred             CeeEEecCCCCCcEEee
Confidence            34689999999999998

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=92.65  E-value=0.062  Score=37.29  Aligned_cols=31  Identities=13%  Similarity=0.145  Sum_probs=25.3

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      ...++|+|+.+.||+ ..++.+.++||..+..
T Consensus       172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            456899999999999 5566789999987743

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=92.00  E-value=0.082  Score=38.27  Aligned_cols=31  Identities=23%  Similarity=0.374  Sum_probs=26.3

Q ss_pred             CCCeEeccCCCCCeeeCCC----CCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDED----HVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~----~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             CEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            4578999999999999876    688999998763

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=90.36  E-value=0.16  Score=36.86  Aligned_cols=29  Identities=21%  Similarity=0.354  Sum_probs=24.0

Q ss_pred             CeEeccCCCCCeee------CCCCCeEECcccccc
Q 043958           17 PIVFKNIKLSSILF------DEDHVAKLFDFSLAE   45 (163)
Q Consensus        17 ~~~H~dik~~nil~------~~~~~~~l~dfg~~~   45 (163)
                      .++|+|+.+.||++      +.+..+.++||-.+.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            45799999999999      456778999998763

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=88.03  E-value=0.24  Score=36.37  Aligned_cols=30  Identities=7%  Similarity=0.313  Sum_probs=26.0

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECcccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAE   45 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~   45 (163)
                      ...++|+|+.+.|++ +.++.+.++||..+.
T Consensus       261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~  290 (424)
T 3mes_A          261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSA  290 (424)
T ss_dssp             CEEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred             CceEECCCCCcccee-cCCCcEEEEecccCC
Confidence            356899999999999 778889999998874

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=87.95  E-value=0.2  Score=35.20  Aligned_cols=27  Identities=11%  Similarity=0.139  Sum_probs=23.7

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFS   42 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg   42 (163)
                      ...++|+|+.+.|++++.++ +.|.|+.
T Consensus       206 ~~~l~HgD~~~~N~l~~~~~-~~~iD~~  232 (312)
T 3jr1_A          206 KPSILHGNLWIENCIQVDDK-IFVCNPA  232 (312)
T ss_dssp             CCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred             CceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence            46789999999999999887 8888974

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=85.85  E-value=0.27  Score=33.73  Aligned_cols=25  Identities=16%  Similarity=0.399  Sum_probs=20.5

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFD   40 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~d   40 (163)
                      ...++|+|+.+.|++++.++. .+.|
T Consensus       187 ~p~LvHGDlw~gNvl~~~~g~-~~iD  211 (288)
T 3f7w_A          187 PPARIHGDLWNGNVLWQDDGA-VVID  211 (288)
T ss_dssp             CCEEECSCCSGGGEEEETTEE-EECS
T ss_pred             CCeeeecCCCCCcEEEcCCCe-EEEe
Confidence            457899999999999998874 4545

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=82.58  E-value=1.9  Score=28.63  Aligned_cols=41  Identities=7%  Similarity=0.006  Sum_probs=30.2

Q ss_pred             HHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958            4 ANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus         4 ~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      +..|..|.......-+|--+.|+|++++.++.+++.-.|+-
T Consensus        91 l~nl~~L~~~~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A           91 AIHLVSKVKHHSARRLIFIVCPENLMFNRALEPFFLHVGVK  131 (219)
T ss_dssp             HHHHHHHHSSCCSSSEECCCCGGGEEECTTCCEEESCCEET
T ss_pred             HHHHHHHHHHhhhCceeEEEeCceEEEeCCCcEEEEEcCCc
Confidence            44445554211355688899999999999999999887764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	163
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-22
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	9e-21
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-20
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-20
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-20
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	5e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	7e-20
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-20
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	2e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	6e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-19
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	9e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	1e-18
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-18
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-17
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-17
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-17
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	3e-17
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	5e-17
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-15
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	7e-14
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	9e-14
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-13
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-13
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	3e-12
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-12
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-12
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-11
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	1e-10
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	2e-10
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-10
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	5e-10
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-09
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	1e-09
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-09
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-09
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	4e-09
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-09
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-08
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-08
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-07
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-07
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-06
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-06
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-06
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	3e-06
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-06
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-05
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	6e-05
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-04

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.4 bits (218), Expect = 2e-22
 Identities = 28/157 (17%), Positives = 64/157 (40%), Gaps = 6/157 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  +AYL     R  V +++   + L  E+ V K+ DF L+ +I   + +  D     
Sbjct: 148 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI 204

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + ++  E +    Y  + DV+++      + +   +       +E++  V    +    
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNI---L 261

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
           +  +        L   C S+   DRP+   + + L++
Sbjct: 262 ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQR 298

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.3 bits (216), Expect = 4e-22
 Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 7/161 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           + A  + YLH    + I+ +++K ++I   ED   K+ DF LA          +     G
Sbjct: 112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSG 168

Query: 62  IMGFVATEYVTTGD---YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC 118
            + ++A E +   D   Y+ + DV++F    + L+     +   N  D+I+  V R  L 
Sbjct: 169 SILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLS 228

Query: 119 IQSSEKDKQV-QAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
              S+      +A   L  +C+ +  ++RP    +   +  
Sbjct: 229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL 269

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.0 bits (207), Expect = 9e-21
 Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 9/163 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            IA  + YL        V +++   +IL + + V K+ DF L+  + D  +       +G
Sbjct: 136 GIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 192

Query: 62  IMG---FVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC 118
                 + A E +    +    DV+S+      +++  ++     T  ++++ + ++   
Sbjct: 193 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY-- 250

Query: 119 IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
            +         A  +L + C  +    RP    +   L +  R
Sbjct: 251 -RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 292

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 1e-20
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 7/158 (4%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++   +AYL       ++ +++   + L  E+ V K+ DF +   + D +         
Sbjct: 108 LDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK- 163

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + + + E  +   Y+ K DV+SF      + +  K   E  +  E+V+ +       +
Sbjct: 164 FPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK 223

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
                  V    ++   C  E  EDRP    + +QL +
Sbjct: 224 PRLASTHVY---QIMNHCWKERPEDRPAFSRLLRQLAE 258

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.4 bits (205), Expect = 2e-20
 Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 5/158 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + +L     R  + +++   +IL  E +V K+ DF LA  I     +++     
Sbjct: 141 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 197

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + ++A E +    Y  + DV+SF      + +           DE     ++E   ++
Sbjct: 198 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 257

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
           +   D       +  + C       RPT  ++ + L  
Sbjct: 258 AP--DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 293

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.8 bits (204), Expect = 2e-20
 Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 7/155 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA+ +AY+        V ++++ ++IL  E+ V K+ DF LA  I D E   +      
Sbjct: 121 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGA-KF 176

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + + A E    G +  K DV+SF      L  + +         E++D V R     + 
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---RM 233

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
               +  ++  +L  +C  +  E+RPT   +   L
Sbjct: 234 PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 268

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.3 bits (205), Expect = 2e-20
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 6/161 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++IA  + YL     R +V +++   ++L       K+ DF LA+ +   E         
Sbjct: 118 VQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGK 174

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + ++A E +    Y  + DV+S+      L+    K  +     EI   + + E   Q
Sbjct: 175 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 234

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
                  V     + VKC    A+ RP   ++  +  +  R
Sbjct: 235 PPICTIDVY---MIMVKCWMIDADSRPKFRELIIEFSKMAR 272

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.7 bits (201), Expect = 5e-20
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 7/160 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI- 60
           +++  + YL        V +++   ++L    H AK+ DF L++++   E + K      
Sbjct: 115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + + A E +    ++ K DV+SF        +  +K        E+   + + E    
Sbjct: 172 WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGC 231

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
            +   +++   +     C +   E+RP    V  +LR  Y
Sbjct: 232 PAGCPREMYDLMN---LCWTYDVENRPGFAAVELRLRNYY 268

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.1 bits (202), Expect = 7e-20
 Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 5/155 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  + +L     +  V +++   ++L     V K+ DF LA  I     ++       
Sbjct: 172 QVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARL 228

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + ++A E +  G Y  K DV+S+      + +           D     +I+    +  
Sbjct: 229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ 288

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
                  +    +   C +  +  RP+  ++   L
Sbjct: 289 PFYA--TEEIYIIMQSCWAFDSRKRPSFPNLTSFL 321

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.3 bits (200), Expect = 9e-20
 Identities = 29/160 (18%), Positives = 69/160 (43%), Gaps = 7/160 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIPI 60
           +++  + YL     +  V +++   ++L    H AK+ DF L++++  D   +   +   
Sbjct: 117 QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGK 173

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + + A E +    ++ + DV+S+       L+  +K  +     E++  + + +    
Sbjct: 174 WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC 233

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY 160
             E   ++ A +     C     EDRP  + V +++R  Y
Sbjct: 234 PPECPPELYALMS---DCWIYKWEDRPDFLTVEQRMRACY 270

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 2e-19
 Identities = 25/157 (15%), Positives = 60/157 (38%), Gaps = 7/157 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++  A+ YL     +  + +++   + L ++  V K+ DF L+  + D E          
Sbjct: 108 DVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK-F 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + +   E +    ++ K D+++F      + +  K   E  T  E  + + +    ++ 
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ---GLRL 220

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
                  +    +   C  E A++RPT   +   +  
Sbjct: 221 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 257

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.0 bits (194), Expect = 6e-19
 Identities = 28/160 (17%), Positives = 64/160 (40%), Gaps = 6/160 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIP 59
           +++A  + YL     +  + +++   ++L     + K+ DF L  ++P  + H +     
Sbjct: 118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR 174

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI 119
                + A E + T  ++   D + F      +    ++        +I+  + +E   +
Sbjct: 175 KVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 234

Query: 120 QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA 159
              E     Q    + V+C +   EDRPT + +   L +A
Sbjct: 235 PRPED--CPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 6e-19
 Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 9/158 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + YL     +  + +++   +IL  E++VAK+ DF L+             +P+
Sbjct: 134 ADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPV 190

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             M   A E +    Y    DV+S+      +++         T  E+ + + +     +
Sbjct: 191 RWM---AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY---R 244

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
             +         +L  +C  E   +RP+   +   L +
Sbjct: 245 LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 282

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.8 bits (193), Expect = 9e-19
 Identities = 27/158 (17%), Positives = 57/158 (36%), Gaps = 6/158 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            ++A  + YL     +  + +++   ++L  ED+V K+ DF LA  I   + + K     
Sbjct: 142 YQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + ++A E +    Y  + DV+SF      +             +E+   +       +
Sbjct: 199 LPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH---R 255

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
             +          +   C       RPT   + + L +
Sbjct: 256 MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 1e-18
 Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 7/155 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +IA  +A++     R  + ++++ ++IL  +    K+ DF LA  I D E   ++     
Sbjct: 117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-F 172

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + + A E +  G +  K DV+SF      ++   +      T  E++  + R     + 
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER---GYRM 229

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQL 156
              D   +   +L   C  E  EDRPT   +   L
Sbjct: 230 VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 3e-18
 Identities = 25/160 (15%), Positives = 57/160 (35%), Gaps = 4/160 (2%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAI-PIG 61
           +    A +        V +++   +IL + + V K+ DF L+  + D             
Sbjct: 116 LRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKI 175

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + + A E ++   +    DV+SF      ++   ++     +  E++  +       + 
Sbjct: 176 PIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG---FRL 232

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
                   A  +L ++C  +    RP   D+   L +  R
Sbjct: 233 PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 272

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 4e-18
 Identities = 31/158 (19%), Positives = 62/158 (39%), Gaps = 11/158 (6%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +++  A+ YL        V +++   ++L  ED+VAK+ DF L +     +         
Sbjct: 110 LDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG-----K 161

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + + A E +    ++ K DV+SF      + +  +         ++V  V +     +
Sbjct: 162 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY---K 218

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
               D    A  E+   C    A  RP+ + + +QL  
Sbjct: 219 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEH 256

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.4 bits (185), Expect = 1e-17
 Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 12/151 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E+ANAL+Y H    + ++ ++IK  ++L       K+ DF  +   P            G
Sbjct: 114 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCG 166

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + ++  E +    ++EK D++S     +  L   K   E NT+ E    + R E     
Sbjct: 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG-KPPFEANTYQETYKRISRVEFTF-- 223

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
              D   +   +L  + +  +   RP + +V
Sbjct: 224 --PDFVTEGARDLISRLLKHNPSQRPMLREV 252

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.0 bits (186), Expect = 1e-17
 Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 5/157 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++A  +A+L     +  + +++   +IL     + K+ DF LA  I +   ++       
Sbjct: 153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARL 209

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + ++A E +    Y  + DV+S+      L +           D     +I+E   + S
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
            E         ++   C       RPT   + + + +
Sbjct: 270 PEH--APAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.3 bits (184), Expect = 2e-17
 Identities = 28/157 (17%), Positives = 69/157 (43%), Gaps = 6/157 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EIA+ +AYL+       V +++   + +  ED   K+ DF +   I + + + K    + 
Sbjct: 141 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLL 197

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            + +++ E +  G +    DV+SF      +    ++  +  + ++++  V+   L    
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL---L 254

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
            + D       EL   C   + + RP+ +++   +++
Sbjct: 255 DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 291

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.0 bits (181), Expect = 3e-17
 Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 7/158 (4%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            +++ ALAYL     +  V ++I   ++L   +   KL DF L+  + D   +       
Sbjct: 115 YQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG-K 170

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + ++A E +    +    DV+ F      +L    K  +    ++++  +   E    
Sbjct: 171 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPM 230

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
                  + + +    KC +     RP   ++  QL  
Sbjct: 231 PPNCPPTLYSLMT---KCWAYDPSRRPRFTELKAQLST 265

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 74.0 bits (181), Expect = 5e-17
 Identities = 24/161 (14%), Positives = 64/161 (39%), Gaps = 7/161 (4%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            +I++A+ YL     +  + +++   + L  E+H+ K+ DF L+  +             
Sbjct: 122 TQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK- 177

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
             + + A E +    ++ K DV++F      +              ++ + ++ ++  ++
Sbjct: 178 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRME 236

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
             E     +   EL   C   +  DRP+  ++ +     ++
Sbjct: 237 RPE--GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 275

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 1e-16
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 5/151 (3%)

Query: 10  LHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP--IGIMGFVA 67
           +     +  V +++   + + DE    K+ DF LA  + D E             + ++A
Sbjct: 143 MKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMA 202

Query: 68  TEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQ 127
            E + T  +  K DV+SF      L+ R           +I   +++    +Q       
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDP 262

Query: 128 VQAFVELAVKCVSESAEDRPTMIDVAKQLRQ 158
                E+ +KC    AE RP+  ++  ++  
Sbjct: 263 ---LYEVMLKCWHPKAEMRPSFSELVSRISA 290

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.3 bits (177), Expect = 1e-16
 Identities = 24/153 (15%), Positives = 59/153 (38%), Gaps = 8/153 (5%)

Query: 2   EIANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++  AL   H        ++ +++K +++  D     KL DF LA  +    +  K  + 
Sbjct: 117 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVG 176

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI 119
                +++ E +    YNEK D++S  G   + L  +       +  E+   +   +   
Sbjct: 177 --TPYYMSPEQMNRMSYNEKSDIWSL-GCLLYELCALMPPFTAFSQKELAGKIREGKFRR 233

Query: 120 QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
                  ++   +    + ++     RP++ ++
Sbjct: 234 IPYRYSDELNEIIT---RMLNLKDYHRPSVEEI 263

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 1e-15
 Identities = 28/188 (14%), Positives = 65/188 (34%), Gaps = 30/188 (15%)

Query: 1   MEIANALAYLHVGF-----PRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK 55
           +  A+ LA+LH+          I  +++K  +IL  ++    + D  LA         I 
Sbjct: 107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTID 166

Query: 56  DAI--PIGIMGFVATEYVTT------GDYNEKCDVFSFAGDRHWLLNRVK---------- 97
            A    +G   ++A E +         +  ++ D+++       +  R            
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 226

Query: 98  ----KHIECNTFDEIVDPVIREEL---CIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI 150
                     + +E+   V  ++L        +  + ++   ++  +C   +   R T +
Sbjct: 227 PYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTAL 286

Query: 151 DVAKQLRQ 158
            + K L Q
Sbjct: 287 RIKKTLSQ 294

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.0 bits (171), Expect = 1e-15
 Identities = 36/154 (23%), Positives = 60/154 (38%), Gaps = 15/154 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
                LAYLH      ++ +++K  +IL  E  + KL DF  A  +    +       +G
Sbjct: 123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF------VG 173

Query: 62  IMGFVATEYVTT---GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC 118
              ++A E +     G Y+ K DV+S       L  R       N    +      E   
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA 233

Query: 119 IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
           +QS    +  + FV+    C+ +  +DRPT   +
Sbjct: 234 LQSGHWSEYFRNFVD---SCLQKIPQDRPTSEVL 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 1e-14
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 6/154 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   + YLH      I  ++IK  ++L DE    K+ DF LA                G
Sbjct: 111 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCG 167

Query: 62  IMGFVATEYVTTGDYN-EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
            + +VA E +   +++ E  DV+S       +L    +       D   +    +E    
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAG--ELPWDQPSDSCQEYSDWKEKKTY 225

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK 154
            +   K   A + L  K + E+   R T+ D+ K
Sbjct: 226 LNPWKKIDSAPLALLHKILVENPSARITIPDIKK 259

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 7e-14
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 6/85 (7%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           + +   L YL       I+ +++K S+IL +     KL DF ++  + D   +      +
Sbjct: 111 IAVIKGLTYLR--EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN----SFV 164

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSF 85
           G   +++ E +    Y+ + D++S 
Sbjct: 165 GTRSYMSPERLQGTHYSVQSDIWSM 189

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (157), Expect = 9e-14
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 12/156 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           +  +AL YLH      I+ +++K  +ILF  D   KL DF ++               IG
Sbjct: 118 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDS--FIG 172

Query: 62  IMGFVATEYVTTGD-----YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE 116
              ++A E V         Y+ K DV+S       +      H E N    ++   I + 
Sbjct: 173 TPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLK--IAKS 230

Query: 117 LCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
                ++  +    F +   KC+ ++ + R T   +
Sbjct: 231 EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 266

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 4e-13
 Identities = 32/152 (21%), Positives = 58/152 (38%), Gaps = 9/152 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF-DEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
           +I   L +LH   P PI+ +++K  +I         K+ D  LA               I
Sbjct: 120 QILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA----VI 174

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
           G   F+A E      Y+E  DV++F      +      + EC    +I   V        
Sbjct: 175 GTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--P 231

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
           +S     +    E+   C+ ++ ++R ++ D+
Sbjct: 232 ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 263

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (152), Expect = 6e-13
 Identities = 31/151 (20%), Positives = 57/151 (37%), Gaps = 7/151 (4%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           E   AL +LH      ++ ++IK  +IL   D   KL DF     I   ++       +G
Sbjct: 124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST--MVG 178

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              ++A E VT   Y  K D++S       ++     ++  N    +    I      + 
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL--IATNGTPEL 236

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
              +K    F +   +C+    E R +  ++
Sbjct: 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKEL 267

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 60.9 bits (147), Expect = 3e-12
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 9/153 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF--DEDHVAKLFDFSLAESIPDGETHIKDAIP 59
           ++   L ++H       V  ++K  +I+F     +  KL DF L   +   ++     + 
Sbjct: 132 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK---VT 185

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI 119
            G   F A E           D++S     + LL+           DE +  V   +  +
Sbjct: 186 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG-LSPFGGENDDETLRNVKSCDWNM 244

Query: 120 QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
             S      +   +   K +      R T+   
Sbjct: 245 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 277

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (146), Expect = 4e-12
 Identities = 30/151 (19%), Positives = 62/151 (41%), Gaps = 8/151 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI +AL YLH    + I+ +++K  +IL +ED   ++ DF  A+ +       +    +G
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVG 172

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              +V+ E +T     +  D+++     + L+  +           I   +I+ E     
Sbjct: 173 TAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGNEYLIFQKIIKLEYDF-P 230

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
            +   + +  VE   K +   A  R    ++
Sbjct: 231 EKFFPKARDLVE---KLLVLDATKRLGCEEM 258

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 59.7 bits (144), Expect = 6e-12
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 13/157 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
            +   +  LH      IV +++K  +IL D+D   KL DF  +  +  GE   +     G
Sbjct: 118 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRE---VCG 171

Query: 62  IMGFVATEYVTTGD------YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE 115
              ++A E +          Y ++ D++S     + LL              ++  ++  
Sbjct: 172 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG-SPPFWHRKQMLMLRMIMSG 230

Query: 116 ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
                S E D       +L  + +    + R T  + 
Sbjct: 231 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 267

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 57.1 bits (137), Expect = 5e-11
 Identities = 28/162 (17%), Positives = 70/162 (43%), Gaps = 6/162 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPI 60
           +   AL + H      I+ +++K ++I+    +  K+ DF +A +I D    + + A  I
Sbjct: 119 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVI 175

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
           G   +++ E       + + DV+S     + +L   +     ++   +    +RE+    
Sbjct: 176 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG-EPPFTGDSPVSVAYQHVREDPIPP 234

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRP-TMIDVAKQLRQAYR 161
           S+  +        + +K ++++ E+R  T  ++   L + + 
Sbjct: 235 SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 1e-10
 Identities = 22/154 (14%), Positives = 54/154 (35%), Gaps = 9/154 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDH--VAKLFDFSLAESIPDGETHIKDAI 58
            ++  AL +LH      I   +I+  +I++        K+ +F  A  +  G+      +
Sbjct: 109 HQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RL 162

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC 118
                 + A E       +   D++S     + LL+         T  +I++ ++  E  
Sbjct: 163 LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG-INPFLAETNQQIIENIMNAEYT 221

Query: 119 IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
                  +     ++   + + +  + R T  + 
Sbjct: 222 FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.4 bits (133), Expect = 2e-10
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 4/151 (2%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++ +A+ YLH         K   L     DED    + DF L++    G          G
Sbjct: 115 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLST---ACG 171

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
             G+VA E +    Y++  D +S     + LL             ++ + +++ E    S
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG-YPPFYDENDAKLFEQILKAEYEFDS 230

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
              D    +  +     + +  E R T    
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQA 261

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 55.1 bits (132), Expect = 3e-10
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 9/153 (5%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIP 59
           +    L ++H      IV  +IK  +I+ +  +    K+ DF LA  +   E      + 
Sbjct: 135 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK---VT 188

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI 119
                F A E V         D+++     + LL+            E +  V R +   
Sbjct: 189 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG-LSPFAGEDDLETLQNVKRCDWEF 247

Query: 120 QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
                        +     + +    R T+ D 
Sbjct: 248 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 280

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.7 bits (131), Expect = 5e-10
 Identities = 33/158 (20%), Positives = 60/158 (37%), Gaps = 11/158 (6%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           I   L ++H    R +V++++K ++IL DE    ++ D  LA      + H       G 
Sbjct: 116 IILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----GT 168

Query: 63  MGFVATEYVTTG-DYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
            G++A E +  G  Y+   D FS       LL       +  T D+    + R  L +  
Sbjct: 169 HGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMTLTMAV 226

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMI-DVAKQLRQ 158
              D        L    +      R   +   A+++++
Sbjct: 227 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 264

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 22/171 (12%), Positives = 60/171 (35%), Gaps = 14/171 (8%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILF---DEDHVAKLFDFSLAESIPDGETHIKDAI 58
           ++ + + Y+H    +  + +++K  + L     + ++  + DF LA+   D  TH     
Sbjct: 111 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPY 167

Query: 59  P-----IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLL--NRVKKHIECNTFDEIVDP 111
                  G   + +       + + + D+ S      +    +   + ++  T  +  + 
Sbjct: 168 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYER 227

Query: 112 VIREELCIQSSEKDKQV-QAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
           +  +++        K     F      C S   +D+P    + +  R  + 
Sbjct: 228 ISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 15/171 (8%), Positives = 50/171 (29%), Gaps = 10/171 (5%)

Query: 1   MEIANALAYLH--VGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAI 58
            ++   +  +H      R I   N  +        ++  + DF + +   D  T      
Sbjct: 108 KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY 167

Query: 59  P-----IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLL--NRVKKHIECNTFDEIVDP 111
                  G   +++       + + + D+ +      + L  +   + ++  T  +  + 
Sbjct: 168 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER 227

Query: 112 VIREELCIQSSEKDKQV-QAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR 161
           +  ++      E      + F +      + + +  P    +     +   
Sbjct: 228 IGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 278

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 8/154 (5%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVA----KLFDFSLAESIPDGETHIKDAI 58
           +   L  ++      I   ++K  +I+  + +V     K+ DF LA  I  G        
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---N 175

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC 118
             G   FVA E V       + D++S     + LL+        +T  E +  V      
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG-ASPFLGDTKQETLANVSAVNYE 234

Query: 119 IQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
            +            +   + + +  + R T+ D 
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 268

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (126), Expect = 2e-09
 Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 10/154 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           EI   L +LH    + IV++++KL +IL D+D   K+ DF + +    G+         G
Sbjct: 111 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNT--FCG 165

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQS 121
              ++A E +    YN   D +SF G   + +   +        +E+   +  +      
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSF-GVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFY-P 223

Query: 122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQ 155
              +K+ +  +    K      E R  +    +Q
Sbjct: 224 RWLEKEAKDLLV---KLFVREPEKRLGVRGDIRQ 254

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.0 bits (124), Expect = 4e-09
 Identities = 32/159 (20%), Positives = 70/159 (44%), Gaps = 14/159 (8%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            E+  AL YLH    + I+++++K  +IL D++   K+ DF  A+ +PD    +      
Sbjct: 111 AEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTL-----C 162

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
           G   ++A E V+T  YN+  D +SF    + +L         +   +  + ++  EL   
Sbjct: 163 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG-YTPFYDSNTMKTYEKILNAELRF- 220

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPT-MIDVAKQLRQ 158
               ++ V+  +    + ++     R   + +  + ++ 
Sbjct: 221 PPFFNEDVKDLLS---RLITRDLSQRLGNLQNGTEDVKN 256

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.6 bits (123), Expect = 4e-09
 Identities = 25/157 (15%), Positives = 53/157 (33%), Gaps = 12/157 (7%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAI 58
            I  A+ YLH      I  +++K  ++L+     + + KL DF  A+      +      
Sbjct: 119 SIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY 175

Query: 59  PIGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRV---KKHIECNTFDEIVDPVIRE 115
               +   A E +    Y++ CD++S     + LL        +        +   +   
Sbjct: 176 TPYYV---APEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 232

Query: 116 ELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
           +    + E  +  +    L    +      R T+ + 
Sbjct: 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 269

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 2e-08
 Identities = 25/157 (15%), Positives = 62/157 (39%), Gaps = 8/157 (5%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
            A  ++ L     R +V+++IKL +++ D+D   K+ DF L +        +K     G 
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT--FCGT 168

Query: 63  MGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSS 122
             ++A E +   DY    D +      + ++   +        + + + ++ EE+     
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG-RLPFYNQDHERLFELILMEEIRF-PR 226

Query: 123 EKDKQVQAFVELAVKCVSESAEDRPTM-IDVAKQLRQ 158
               + ++ +      + +  + R       AK++ +
Sbjct: 227 TLSPEAKSLLA---GLLKKDPKQRLGGGPSDAKEVME 260

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.5 bits (117), Expect = 2e-08
 Identities = 26/173 (15%), Positives = 51/173 (29%), Gaps = 28/173 (16%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   L +LH      +V +++K  +IL       KL DF LA               + 
Sbjct: 124 QLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS---VVV 177

Query: 62  IMGFVATEYVTTGDYNEKCDVFSF---------------AGDRHWLLNRVKKHIECNTFD 106
            + + A E +    Y    D++S                       L ++   I     +
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237

Query: 107 EIVDPVIREELCIQSSEKDKQVQ-------AFVELAVKCVSESAEDRPTMIDV 152
           +    V        S       +          +L +KC++ +   R +    
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 290

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 6e-08
 Identities = 32/175 (18%), Positives = 58/175 (33%), Gaps = 29/175 (16%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
                L YLH      I+ +++K +++L DE+ V KL DF LA+S   G  +      + 
Sbjct: 108 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF--GSPNRAYTHQVV 162

Query: 62  IMGFVATEYVTTGD-YNEKCDVFS--------------FAGDRHW-LLNRVKKHIECNTF 105
              + A E +     Y    D+++                GD     L R+ + +   T 
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222

Query: 106 DEIVDPVIREELCIQSSEKDKQVQ--------AFVELAVKCVSESAEDRPTMIDV 152
           ++  D     +     S     +           ++L       +   R T    
Sbjct: 223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 277

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 1e-07
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 6/86 (6%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++  +LAY+H      I  ++IK  ++L D D  V KL DF  A+ +  GE ++      
Sbjct: 130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS--YIC 184

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFA 86
                         DY    DV+S  
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAG 210

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 2e-07
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 5/95 (5%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESI-PDGETHIKDAIP 59
            +I   L Y+H      ++ +++K S++L +     K+ DF LA    PD +        
Sbjct: 116 YQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY 172

Query: 60  IGIMGFVATEYVTTGD-YNEKCDVFSFAGDRHWLL 93
           +    + A E +     Y +  D++S       +L
Sbjct: 173 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 207

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.8 bits (105), Expect = 1e-06
 Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 5/159 (3%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGI 62
           +   +  L       I++++IKL +IL D +    L DF L++     ET        G 
Sbjct: 135 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGT 193

Query: 63  MGFVATEYVTTGD--YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
           + ++A + V  GD  +++  D +S     + LL         +        + R  L  +
Sbjct: 194 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG-ASPFTVDGEKNSQAEISRRILKSE 252

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDRPTM-IDVAKQLRQ 158
                +      +L  + + +  + R       A ++++
Sbjct: 253 PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE 291

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.4 bits (104), Expect = 1e-06
 Identities = 19/159 (11%), Positives = 55/159 (34%), Gaps = 14/159 (8%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPI 60
            +I     YLH      ++++++K  ++L D+    ++ DF  A+ +      +      
Sbjct: 148 AQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTL-----C 199

Query: 61  GIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ 120
           G    +A E + +  YN+  D ++     + +          +   +I + ++  ++   
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG-YPPFFADQPIQIYEKIVSGKVRFP 258

Query: 121 SSEKDKQVQAFVELAVKCVSESAEDR-PTMIDVAKQLRQ 158
                       +L    +      R   + +    ++ 
Sbjct: 259 ----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.2 bits (103), Expect = 2e-06
 Identities = 18/113 (15%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   L + H    R ++ +++K  ++L + +   KL +F LA +           +   
Sbjct: 109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL 165

Query: 62  IMGFVATEYVTTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR 114
                         Y+   D++S       L N  +     N  D+ +  + R
Sbjct: 166 WY-RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (102), Expect = 3e-06
 Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 3   IANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIP--I 60
           +   L  L+      I+ +++K +++L   D V KL DF LA +    +    +     +
Sbjct: 123 MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRV 182

Query: 61  GIMGFVATEYVTTG-DYNEKCDVFSFA 86
             + +   E +    DY    D++   
Sbjct: 183 VTLWYRPPELLLGERDYGPPIDLWGAG 209

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 43.3 bits (101), Expect = 3e-06
 Identities = 24/175 (13%), Positives = 56/175 (32%), Gaps = 28/175 (16%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++ N +AY H    R ++ +++K  ++L + +   K+ DF LA +           I   
Sbjct: 108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT- 163

Query: 62  IMGFVATEYVTTGDYNEKCDVFS--------------FAGDRHW-LLNRVKKHIECNTFD 106
           +        + +  Y+   D++S              F G      L R+ + +      
Sbjct: 164 LWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSK 223

Query: 107 EIVDPVIREELCIQSSEKDKQV---------QAFVELAVKCVSESAEDRPTMIDV 152
              +     +     +  +            ++ ++L  K +      R T    
Sbjct: 224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.9 bits (97), Expect = 1e-05
 Identities = 16/94 (17%), Positives = 33/94 (35%), Gaps = 3/94 (3%)

Query: 1   MEIANALAYLHVGFPRPIVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIP 59
            ++   L Y+H      I+  +IK  ++L +  D    L    +A+              
Sbjct: 132 KQLLLGLDYMH--RRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNS 189

Query: 60  IGIMGFVATEYVTTGDYNEKCDVFSFAGDRHWLL 93
           I    + + E +    +    D++S A     L+
Sbjct: 190 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELI 223

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 6e-05
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 20/153 (13%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPI 60
           ++  A+ + H      ++ ++IK  +IL D +    KL DF     + D           
Sbjct: 118 QVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTD----FD 170

Query: 61  GIMGFVATEYVTTGDY-NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCI 119
           G   +   E++    Y      V+S     + ++      I     +EI+   +     +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV---CGDIPFEHDEEIIRGQVFFRQRV 227

Query: 120 QSSEKDKQVQAFVELAVKCVSESAEDRPTMIDV 152
            S  +         L   C++    DRPT  ++
Sbjct: 228 SSECQH--------LIRWCLALRPSDRPTFEEI 252

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (87), Expect = 2e-04
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 9/95 (9%)

Query: 2   EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIG 61
           ++   L Y+H      I+ +++K  ++  +ED   K+ DF LA       T       + 
Sbjct: 129 QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTG-----YVV 180

Query: 62  IMGFVATE-YVTTGDYNEKCDVFSFAGDRHWLLNR 95
              + A E  +    Y +  D++S       ++  
Sbjct: 181 TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITG 215

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	163
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.98
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.39
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.16
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.64
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	95.19
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.95
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	92.6
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	85.42

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-44  Score=245.94  Aligned_cols=155  Identities=19%  Similarity=0.271  Sum_probs=120.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.+||+|||+++........... ...||..|+|||.+.+..++.++|
T Consensus       109 qia~gl~~lH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~-~~~gt~~y~aPE~l~~~~~~~k~D  184 (263)
T d1sm2a_         109 DVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYSSKSD  184 (263)
T ss_dssp             HHHHHHHHHH---HTTCCCTTCSGGGEEECGGGCEEECSCC-------------------CTTSCCHHHHTTCCCCHHHH
T ss_pred             HHHHHHHhhh---ccceeecccchhheeecCCCCeEecccchheeccCCCceeec-ceecCcccCChHHhcCCCCCchhh
Confidence            8999999999   899999999999999999999999999999876554333222 346889999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++||++++..|++......++...+..+..   ...+..+++++.+++.+||+.||++|||++++++.|+++.+
T Consensus       185 VwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~---~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFR---LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCC---CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            999999999999988887766666666655544321   12223456789999999999999999999999999999999


Q ss_pred             cC
Q 043958          162 FG  163 (163)
Q Consensus       162 ~~  163 (163)
                      +|
T Consensus       262 sg  263 (263)
T d1sm2a_         262 SG  263 (263)
T ss_dssp             HC
T ss_pred             CC
Confidence            87

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-43  Score=248.86  Aligned_cols=156  Identities=19%  Similarity=0.279  Sum_probs=121.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||++||+|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|+|||.+.++.++.++|
T Consensus       142 qi~~gl~ylH---~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sD  218 (299)
T d1ywna1         142 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSD  218 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCCcCCcCCccceeECCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccc
Confidence            7999999999   8999999999999999999999999999998776555544444567999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||+||++|+++++..+++......+.+.........+  ......++++.+++.+||+.||++|||+.++++.|+++.+
T Consensus       219 iwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq  296 (299)
T d1ywna1         219 VWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  296 (299)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             eeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            99999999999998776554444333333333333222  2233456789999999999999999999999999999875


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      +
T Consensus       297 ~  297 (299)
T d1ywna1         297 A  297 (299)
T ss_dssp             H
T ss_pred             C
Confidence            3

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-43  Score=244.10  Aligned_cols=158  Identities=22%  Similarity=0.291  Sum_probs=120.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc---CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~   78 (163)
                      ||++||+|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|||||.+.+   +.++.
T Consensus       112 qi~~gl~yLH---~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~  188 (276)
T d1uwha_         112 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF  188 (276)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCH
T ss_pred             HHHHHHHHHh---cCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCc
Confidence            8999999999   89999999999999999999999999999977654443333335578999999999864   35888


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhccc-chhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ-SSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLR  157 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~  157 (163)
                      ++|||||||++||+++|..||........+......+...+. ......+++.+.+++.+||+.||++|||+.++++.|+
T Consensus       189 ~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le  268 (276)
T d1uwha_         189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIE  268 (276)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            999999999999999999887654444433333322221111 1223356788999999999999999999999999999


Q ss_pred             HHhhc
Q 043958          158 QAYRF  162 (163)
Q Consensus       158 ~~~~~  162 (163)
                      .+.++
T Consensus       269 ~l~~~  273 (276)
T d1uwha_         269 LLARS  273 (276)
T ss_dssp             HHHHT
T ss_pred             HHHHc
Confidence            98764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=241.54  Aligned_cols=155  Identities=18%  Similarity=0.223  Sum_probs=120.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++......... ......||+.|+|||.+.++.++.++
T Consensus       118 ~i~~gl~~lH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~s  194 (283)
T d1mqba_         118 GIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS  194 (283)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHH
T ss_pred             HHHHhhhhcc---ccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcc
Confidence            7899999999   8999999999999999999999999999998765443222 22234578899999999999999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      ||||||+++||++++..|++......+++..+..+. .  .+.+..++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       195 DI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~-~--~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~  271 (283)
T d1mqba_         195 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGF-R--LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  271 (283)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC-C--CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cccccHHHHHHHHhCCCCccccCCHHHHHHHHhccC-C--CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence            999999999999998888877666666655544332 1  2223346678999999999999999999999999999887


Q ss_pred             hc
Q 043958          161 RF  162 (163)
Q Consensus       161 ~~  162 (163)
                      +.
T Consensus       272 ~~  273 (283)
T d1mqba_         272 RA  273 (283)
T ss_dssp             HS
T ss_pred             hC
Confidence            54

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-42  Score=240.35  Aligned_cols=154  Identities=23%  Similarity=0.314  Sum_probs=127.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++++||||||+|||++.++.+||+|||+++........... ...+++.|+|||.+.++.++.++|
T Consensus       117 qi~~gl~~lH---~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~-~~~gt~~y~APE~~~~~~~~~~sD  192 (272)
T d1qpca_         117 QIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTARE-GAKFPIKWTAPEAINYGTFTIKSD  192 (272)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCT-TCCCCTTTSCHHHHHHCEECHHHH
T ss_pred             HHHHHHHHHH---hCCcccCccchhheeeecccceeeccccceEEccCCcccccc-ccCCcccccChHHHhCCCCCchhh
Confidence            7899999999   899999999999999999999999999999877654433222 346888999999999888999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++||++++..|++......++...+..+.. +  ..+..+++++.+|+.+||+.||++|||++++++.|++++.
T Consensus       193 vwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~-~--~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYR-M--VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCC-C--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC-C--CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            999999999999988888766666665555444321 1  2223466789999999999999999999999999998875


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      +
T Consensus       270 s  270 (272)
T d1qpca_         270 A  270 (272)
T ss_dssp             H
T ss_pred             c
Confidence            3

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-42  Score=245.11  Aligned_cols=151  Identities=17%  Similarity=0.241  Sum_probs=122.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+||+++.++.+||+|||+++...............+|+.|||||.+.++.++.++|
T Consensus       172 qi~~gl~yLH---~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~D  248 (325)
T d1rjba_         172 QVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD  248 (325)
T ss_dssp             HHHHHHHHHH---HTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCccee
Confidence            7999999999   8999999999999999999999999999998766555444333456899999999999999999999


Q ss_pred             eeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        82 v~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      ||||||++||+++ |..|| ......+.+.........+.  .+..+++++.+|+.+||+.||++|||++++++.|..
T Consensus       249 iwS~Gvil~emlt~g~~Pf-~~~~~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         249 VWSYGILLWEIFSLGVNPY-PGIPVDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHHHHHHTTTSCCSS-TTCCCSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             ccchhHHHHHHHhCCCCCC-CCCCHHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            9999999999998 45554 34333344444444443332  233467889999999999999999999999999964

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.7e-42  Score=240.84  Aligned_cols=155  Identities=17%  Similarity=0.231  Sum_probs=113.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc---ccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK---DAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||++||+|||   +++++||||||+|||++.++.+||+|||+++..........   .....+++.|+|||.+.++.++.
T Consensus       136 qia~gl~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  212 (299)
T d1jpaa_         136 GIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTS  212 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCH
T ss_pred             HHHHHHHHHh---hCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCc
Confidence            7999999999   89999999999999999999999999999987654432221   11235788999999999999999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQ  158 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~  158 (163)
                      ++|||||||++||++++..+|+......+++..+..+.   ..+.+..++..+.+++.+||+.||++|||+.++++.|++
T Consensus       213 ~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         213 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY---RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             ccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC---CCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            99999999999999985444444444555555544332   122233467889999999999999999999999999999


Q ss_pred             Hhhc
Q 043958          159 AYRF  162 (163)
Q Consensus       159 ~~~~  162 (163)
                      +.+.
T Consensus       290 ~l~~  293 (299)
T d1jpaa_         290 MIRN  293 (299)
T ss_dssp             HHHS
T ss_pred             HhcC
Confidence            8764

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.3e-42  Score=240.65  Aligned_cols=153  Identities=15%  Similarity=0.270  Sum_probs=126.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++........... ...+++.|+|||.+.++.++.++|
T Consensus       123 qi~~gL~yLH---~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~-~~~g~~~y~aPE~~~~~~~~~k~D  198 (287)
T d1opja_         123 QISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHA-GAKFPIKWTAPESLAYNKFSIKSD  198 (287)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEET-TEEECGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHHHHHH---HCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeec-cccccccccChHHHcCCCCCchhh
Confidence            8999999999   899999999999999999999999999999877654433222 335788999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||+|+++|+++++..|++......++...+..+ ..+  +.+..+++.+.+|+.+||+.||++|||+.++++.|+.+.+
T Consensus       199 iwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~-~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         199 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD-YRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             hhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcC-CCC--CCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            9999999999999888887666665554433322 222  2233467889999999999999999999999999998754

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.4e-42  Score=242.19  Aligned_cols=153  Identities=18%  Similarity=0.267  Sum_probs=127.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+|||++.++.+||+|||+++...............+++.|+|||.+.+..++.++|
T Consensus       148 qi~~gl~ylH---~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksD  224 (301)
T d1lufa_         148 QVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD  224 (301)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHhhhcc---cCCeEeeEEcccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhh
Confidence            7899999999   8999999999999999999999999999998775554444333456888999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAY  160 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~  160 (163)
                      |||||+++||++++..+|+......++...+..+...   +.+..+++++.+|+.+||+.+|++|||+.++++.|+++.
T Consensus       225 VwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~---~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         225 VWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             hccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            9999999999999987777666666776665555422   222345678999999999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.5e-42  Score=240.63  Aligned_cols=154  Identities=20%  Similarity=0.265  Sum_probs=123.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.+||+|||+++...............||+.|+|||.+.++.++.++|
T Consensus       119 qi~~gl~yLH---~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sD  195 (317)
T d1xkka_         119 QIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD  195 (317)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---HcCcccCcchhhcceeCCCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhh
Confidence            8999999999   8999999999999999999999999999998876555444443456899999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++||++++..+|+......++...+..+. .+  +.+..+++.+.+++.+||+.||++|||+.++++.|+.+.+
T Consensus       196 vwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~-~~--~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         196 VWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE-RL--PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTC-CC--CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-CC--CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            99999999999997666666555555554443332 12  2223466789999999999999999999999999988754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-41  Score=233.94  Aligned_cols=148  Identities=22%  Similarity=0.195  Sum_probs=117.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Cccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~~   80 (163)
                      |+++||+|||   +++|+||||||+|||++.++.+||+|||+++...............||+.|+|||.+.+..+ +.++
T Consensus       111 qi~~al~ylH---~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~  187 (271)
T d1nvra_         111 QLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV  187 (271)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHH
T ss_pred             HHHHHHHHHH---HcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCce
Confidence            8999999999   89999999999999999999999999999987755443333335679999999999988776 5689


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ||||+||++|++++|..||.................  .........++++.+|+.+||+.||++|||++++++
T Consensus       188 DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTC--TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             eeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            999999999999999988865443322222222221  122223345678999999999999999999999976

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-41  Score=235.59  Aligned_cols=155  Identities=17%  Similarity=0.245  Sum_probs=129.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +.+++||||||+|||++.++.+||+|||+++...............+++.|+|||.+.++.|+.++|
T Consensus       143 qi~~al~ylH---~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~D  219 (299)
T d1fgka_         143 QVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD  219 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHhh---hCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhh
Confidence            8999999999   8999999999999999999999999999998776555444444567889999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++|++++++.+++......++...+..+ ..+  ..+...++.+.+|+.+||+.||++|||+.++++.|+++.+
T Consensus       220 iwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~-~~~--~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         220 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG-HRM--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT-CCC--CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             hHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcC-CCC--CCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            9999999999999767666666666655544333 222  2233466789999999999999999999999999999876


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       297 ~  297 (299)
T d1fgka_         297 L  297 (299)
T ss_dssp             H
T ss_pred             c
Confidence            3

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-41  Score=234.02  Aligned_cols=153  Identities=18%  Similarity=0.278  Sum_probs=122.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc-cccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI-KDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+||+++.++.+||+|||+++......... ......+|+.|+|||.+.++.++.++
T Consensus       117 qi~~gL~ylH---~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ks  193 (285)
T d1u59a_         117 QVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS  193 (285)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHH
T ss_pred             HHHHHHHHHH---hCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccc
Confidence            8999999999   8999999999999999999999999999998776543322 22234588899999999988999999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |||||||++||+++ |..||. .....++...+..+.. +  +.+..+++++.+|+.+||+.+|++|||+.++++.|+..
T Consensus       194 DVwS~Gv~l~E~lt~G~~Pf~-~~~~~~~~~~i~~~~~-~--~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         194 DVWSYGVTMWEALSYGQKPYK-KMKGPEVMAFIEQGKR-M--ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTT-TCCTHHHHHHHHTTCC-C--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhcchHHHHHHHhCCCCCCC-CCCHHHHHHHHHcCCC-C--CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            99999999999998 555554 4444445444443321 2  22335678899999999999999999999999999876


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      +.
T Consensus       270 ~~  271 (285)
T d1u59a_         270 YY  271 (285)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.8e-41  Score=232.98  Aligned_cols=146  Identities=21%  Similarity=0.322  Sum_probs=118.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.+||+|||+++.........  ....||+.|+|||.+.++.++.++|
T Consensus       124 qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~--~~~~gt~~Y~aPE~~~~~~~~~~~D  198 (293)
T d1yhwa1         124 ECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--STMVGTPYWMAPEVVTRKAYGPKVD  198 (293)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCB--CCCCSCGGGCCHHHHSSSCBCTHHH
T ss_pred             HHHHHHHHHH---HCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccc--cccccCCCccChhhhcCCCCCchhc
Confidence            8999999999   8999999999999999999999999999998775443322  2346999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++|+|++|..||........+ ........ +........++.+++|+.+||+.||++|||+.++++
T Consensus       199 iwSlGvilyemltG~~Pf~~~~~~~~~-~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         199 IWSLGIMAIEMIEGEPPYLNENPLRAL-YLIATNGT-PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHHCS-CCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             eehHhHHHHHHhhCCCCCCCCCHHHHH-HHHHhCCC-CCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999887654443333 32222221 222334456788999999999999999999999975

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-41  Score=233.71  Aligned_cols=153  Identities=19%  Similarity=0.261  Sum_probs=115.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||++||.|||   +++++||||||+||+++.++.+|++|||+++........... ...+|+.|+|||.+.++.++.++|
T Consensus       116 qi~~gl~ylH---~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~-~~~gt~~y~apE~l~~~~~~~~~D  191 (273)
T d1mp8a_         116 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS-KGKLPIKWMAPESINFRRFTSASD  191 (273)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHH
T ss_pred             HHHHHhhhhc---ccCeeccccchhheeecCCCcEEEccchhheeccCCcceecc-ceecCcccchhhHhccCCCCCccc
Confidence            8999999999   899999999999999999999999999999776543332222 345788999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      ||||||++|+++++..+|+......++...+..+..   .+.+..+++.+.+|+.+||+.||++|||+.++++.|+++.+
T Consensus       192 iwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         192 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGER---LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            999999999999865666655556666655544432   12234567889999999999999999999999999998864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-40  Score=228.45  Aligned_cols=141  Identities=22%  Similarity=0.344  Sum_probs=118.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||++||+|||   +++++||||||+|||++.++.+||+|||++.........    ...||+.|+|||.+.+..++.++|
T Consensus       114 qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~----~~~Gt~~Y~APE~~~~~~~~~~~D  186 (263)
T d2j4za1         114 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRT----TLCGTLDYLPPEMIEGRMHDEKVD  186 (263)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCE----ETTEEGGGCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHHH---HCCeeeeeeccccceecCCCCEeecccceeeecCCCccc----ccCCCCcccCHHHHcCCCCCchhh
Confidence            8999999999   899999999999999999999999999999776544322    346999999999999989999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++|++++|..||. .....++...+....+..+    ...++++.+|+.+||+.||++|||+.++++
T Consensus       187 iwSlGvilyell~G~~Pf~-~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         187 LWSLGVLCYEFLVGKPPFE-ANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHHHHHHHHHSSCTTC-CSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhHhHHHHHHhcCCCCCC-CCCHHHHHHHHHcCCCCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            9999999999999988875 4444555555544443222    235678999999999999999999999987

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.3e-41  Score=229.49  Aligned_cols=151  Identities=17%  Similarity=0.246  Sum_probs=122.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |+++||+|||   +++++||||||+||+++.++.+||+|||+++.......... ....+++.|+|||.+.+..++.++|
T Consensus       108 qi~~gl~~LH---~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~-~~~~~t~~y~aPE~~~~~~~~~ksD  183 (258)
T d1k2pa_         108 DVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS-VGSKFPVRWSPPEVLMYSKFSSKSD  183 (258)
T ss_dssp             HHHHHHHHHH---HTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCC-CCSCCCGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hcCcccccccceeEEEcCCCcEEECcchhheeccCCCceee-cccCCCCCcCCcHHhcCCCCCccee
Confidence            8999999999   89999999999999999999999999999987655433322 2456889999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      |||||+++||++++..+|+......++...+..+. ..  ..+..+++.+.+|+.+||+.||++|||++++++.|.++
T Consensus       184 iwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~-~~--~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         184 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL-RL--YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTC-CC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             ecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCC-CC--CCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            99999999999986555555555555555554432 22  22335667899999999999999999999999998653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-41  Score=232.76  Aligned_cols=152  Identities=20%  Similarity=0.270  Sum_probs=120.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+|++|||+++.......... .....||+.|+|||.+.++.++.++
T Consensus       115 qi~~gl~ylH---~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~s  191 (277)
T d1xbba_         115 QVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKS  191 (277)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHH
T ss_pred             HHHHHHhhHH---hCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchh
Confidence            8999999999   89999999999999999999999999999987755443322 2234688899999999989999999


Q ss_pred             ceeecchhhHHHhh-hccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLN-RVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      ||||||+++||+++ |..|| ......++...+..+. ++  +.+..++.++.+|+.+||+.||++|||+.++.+.|+..
T Consensus       192 DiwS~Gv~l~ellt~g~~Pf-~~~~~~~~~~~i~~~~-~~--~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         192 DVWSFGVLMWEAFSYGQKPY-RGMKGSEVTAMLEKGE-RM--GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHHHHHHHHTTTCCSS-TTCCHHHHHHHHHTTC-CC--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             hhccchhhhhHHhhCCCCCC-CCCCHHHHHHHHHcCC-CC--CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            99999999999998 45554 4444444444443332 12  22334678899999999999999999999999988876


Q ss_pred             h
Q 043958          160 Y  160 (163)
Q Consensus       160 ~  160 (163)
                      +
T Consensus       268 ~  268 (277)
T d1xbba_         268 Y  268 (277)
T ss_dssp             H
T ss_pred             H
Confidence            5

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-41  Score=232.91  Aligned_cols=153  Identities=24%  Similarity=0.306  Sum_probs=122.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++........... ...+++.|+|||.+.++.++.++|
T Consensus       121 ~i~~gl~~LH---~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~-~~~gt~~y~aPE~~~~~~~~~ksD  196 (285)
T d1fmka3         121 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ-GAKFPIKWTAPEAALYGRFTIKSD  196 (285)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hhheecccccceEEEECCCCcEEEcccchhhhccCCCceeec-cccccccccChHHHhCCCCCcHHh
Confidence            7899999999   899999999999999999999999999999876544332222 346889999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++|+++++..|++......+++..+..+.   ..+....+++++.+++.+||+.||++|||++++++.|++.+.
T Consensus       197 I~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         197 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY---RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             hhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC---CCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            99999999999999888887777666666554432   122334567889999999999999999999999999988654

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-40  Score=226.75  Aligned_cols=143  Identities=22%  Similarity=0.321  Sum_probs=114.6

Q ss_pred             hHHHHHHHHhcCCCCC--eEeccCCCCCeeeC-CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRP--IVFKNIKLSSILFD-EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~--~~H~dik~~nil~~-~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||++||+|||   +++  |+||||||+|||++ .++.+||+|||+++.......    ....||+.|+|||.+. ++++.
T Consensus       120 qi~~gl~yLH---~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~----~~~~GT~~Y~aPE~~~-~~~~~  191 (270)
T d1t4ha_         120 QILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFA----KAVIGTPEFMAPEMYE-EKYDE  191 (270)
T ss_dssp             HHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSB----EESCSSCCCCCGGGGG-TCCCT
T ss_pred             HHHHHHHHHH---HCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCcc----CCcccCccccCHHHhC-CCCCC
Confidence            8999999999   777  99999999999996 588999999999976543322    2346999999999886 46999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+||++|+|++|..||........+...+..+..  +.......++++.+++.+||+.||++|||+.|+++
T Consensus       192 ~~DIwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         192 SVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCchhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCC--CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            999999999999999999998765555555444443321  12223345678999999999999999999999986

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-40  Score=229.49  Aligned_cols=145  Identities=21%  Similarity=0.268  Sum_probs=115.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++|+||||||+||+++.++.+|++|||+++...............||+.|+|||.+.+..++.++|
T Consensus       116 qi~~al~ylH---~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~D  192 (288)
T d1uu3a_         116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD  192 (288)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHH
T ss_pred             HHHHHHHhhc---cccEEcCcCCccccccCCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccc
Confidence            7899999999   8999999999999999999999999999998776544443333457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |||+||++|+|++|..||.. ....++...+....+..+    ...++.+++|+.+||+.||++|||++|+++
T Consensus       193 iwSlGvilyell~g~~Pf~~-~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         193 LWALGCIIYQLVAGLPPFRA-GNEYLIFQKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHTTCCCCC----TTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             eehhhHHHHHHhhCCCCCCC-cCHHHHHHHHHcCCCCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            99999999999999888754 344455555555443322    235678999999999999999999998754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-40  Score=228.95  Aligned_cols=155  Identities=17%  Similarity=0.315  Sum_probs=122.4

Q ss_pred             ChHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCccc-ccCccccccccCccccccCCCCcc
Q 043958            1 MEIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIK-DAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         1 ~qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~-~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      .|++.||.|||   +++++||||||+||+++.++.+||+|||+++.......... .....++..|+|||.+.+..++.+
T Consensus       118 ~qi~~gl~ylH---~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~  194 (273)
T d1u46a_         118 VQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA  194 (273)
T ss_dssp             HHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHH
T ss_pred             HHHHHHHHHhh---hCCEeeeeecHHHhccccccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcc
Confidence            38999999999   89999999999999999999999999999988765543322 223457789999999999899999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||||||+++||+++++.+|+......+....+......+  +.....+..+.+++.+||+.||++|||+.++.+.|++.
T Consensus       195 ~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         195 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL--PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCC--CCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            9999999999999984344444555555655555444332  22334667899999999999999999999999999876


Q ss_pred             h
Q 043958          160 Y  160 (163)
Q Consensus       160 ~  160 (163)
                      +
T Consensus       273 ~  273 (273)
T d1u46a_         273 Q  273 (273)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-40  Score=231.02  Aligned_cols=155  Identities=18%  Similarity=0.300  Sum_probs=130.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |+++||.|||   +++++||||||+|||++.++.+||+|||+++...............+++.|++||.+.++.++.++|
T Consensus       141 ~ia~gl~~LH---~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~D  217 (308)
T d1p4oa_         141 EIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD  217 (308)
T ss_dssp             HHHHHHHHHH---HTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHh---hCCeeeceEcCCceeecCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccc
Confidence            7899999999   8999999999999999999999999999998776655554444557899999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++||++++..+|+......+.+..+..+...   .....+++.+.+++.+||+.+|++|||+.++++.|++..+
T Consensus       218 v~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~  294 (308)
T d1p4oa_         218 VWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  294 (308)
T ss_dssp             HHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             cccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            9999999999999987777776766666665554321   1223456789999999999999999999999999988654


Q ss_pred             c
Q 043958          162 F  162 (163)
Q Consensus       162 ~  162 (163)
                      .
T Consensus       295 ~  295 (308)
T d1p4oa_         295 P  295 (308)
T ss_dssp             T
T ss_pred             C
Confidence            3

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=228.81  Aligned_cols=155  Identities=19%  Similarity=0.283  Sum_probs=124.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||.|+|   +++++||||||+|||++.++.+||+|||+++.........  ......|+..|+|||.+.++.++.+
T Consensus       138 qia~gL~~lH---~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~k  214 (311)
T d1r0pa_         138 QVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK  214 (311)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHH
T ss_pred             HHHHhhhhhc---ccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCCh
Confidence            7999999999   8999999999999999999999999999998765443222  2223468889999999999999999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQA  159 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~  159 (163)
                      +||||||+++||++++..||.......++...+..+.. +.  .+..++..+.+++.+||+.||++|||+.++++.|+++
T Consensus       215 sDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~-~~--~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i  291 (311)
T d1r0pa_         215 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRR-LL--QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  291 (311)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCC-CC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             hHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCC-CC--CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            99999999999999998888765555555554444432 21  2234567899999999999999999999999999998


Q ss_pred             hhc
Q 043958          160 YRF  162 (163)
Q Consensus       160 ~~~  162 (163)
                      .+.
T Consensus       292 ~~~  294 (311)
T d1r0pa_         292 FST  294 (311)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            754

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-39  Score=228.72  Aligned_cols=155  Identities=17%  Similarity=0.273  Sum_probs=129.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+||+++.++.++++|||+++...............+|+.|+|||.+.++.++.++|
T Consensus       153 qi~~gl~~LH---~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  229 (311)
T d1t46a_         153 QVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  229 (311)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHH---hCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCccc
Confidence            8999999999   8999999999999999999999999999998776655444444567899999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++|+|+++..|++......+.+.........+..+  ...+..+.+|+.+||+.||++|||+.++++.|+++..
T Consensus       230 IwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~  307 (311)
T d1t46a_         230 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS  307 (311)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCc--ccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhhc
Confidence            99999999999998777776655555555555444333322  3456789999999999999999999999999987653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-39  Score=228.75  Aligned_cols=146  Identities=21%  Similarity=0.293  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC---CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +++++||||||+||++.   .++.+|++|||+++.........   ...||+.|+|||.+.+..++.
T Consensus       115 qi~~al~ylH---~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~---~~~GT~~y~APE~~~~~~~~~  188 (307)
T d1a06a_         115 QVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS---TACGTPGYVAPEVLAQKPYSK  188 (307)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCC---------------------CTTSCHHHHTTCCCCT
T ss_pred             HHHHHHHhhh---hceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeee---eeeeCccccCcHHHcCCCCCc
Confidence            8999999999   89999999999999994   57899999999997665443322   346999999999999999999


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+||++|+|++|..||.. ....++...+.........+.....++++.+|+.+||+.||++|||+.|+++
T Consensus       189 ~~DiwSlGvilyell~g~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         189 AVDCWSIGVIAYILLCGYPPFYD-ENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHhhhhhHHHHHHHhCCCCCCC-CCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            99999999999999999888754 3444555555555554555555567789999999999999999999999987

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-40  Score=230.04  Aligned_cols=151  Identities=17%  Similarity=0.235  Sum_probs=125.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++++||||||+|||++.++.+||+|||+++.........   ...+|..|+|||.+.++.++.++|
T Consensus       135 qia~gl~~lH---~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~~~~---~~~gt~~y~aPE~l~~~~~~~~sD  208 (309)
T d1fvra_         135 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT---MGRLPVRWMAIESLNYSVYTTNSD  208 (309)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEECCC-------CCTTTCCHHHHHHCEECHHHH
T ss_pred             HHHHHHHhhh---cCCccccccccceEEEcCCCceEEcccccccccccccccc---ceecCCcccchHHhccCCCCccce
Confidence            8999999999   8999999999999999999999999999997554333222   335888999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++|+++++..+|+......++...+..+. .+  ..+..+++++.+|+.+||+.||++|||+.++++.|+++.+
T Consensus       209 vwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~-~~--~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         209 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY-RL--EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTC-CC--CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             eehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcC-CC--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            99999999999999887777767666666654432 12  2233466889999999999999999999999999998864

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.7e-40  Score=228.50  Aligned_cols=146  Identities=23%  Similarity=0.291  Sum_probs=115.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccc-----cCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVT-----TGDY   76 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~-----~~~~   76 (163)
                      ||+.||.|||   +++|+||||||+|||++.++.+||+|||++.........  .....||+.|+|||.+.     +..|
T Consensus       118 qi~~gL~ylH---~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~--~~~~~Gt~~y~APE~l~~~~~~~~~y  192 (288)
T d2jfla1         118 QTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQR--RDSFIGTPYWMAPEVVMCETSKDRPY  192 (288)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHH--HTCCCSCCTTCCHHHHTTCSTTTSST
T ss_pred             HHHHHHHHHH---HCCEEEeecChhheeECCCCCEEEEechhhhccCCCccc--ccccccccccCCHHHHhhcccCCCCC
Confidence            8999999999   899999999999999999999999999998655322111  12346899999999884     3458


Q ss_pred             CcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           77 NEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        77 ~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.++||||+||++|++++|..||.... ..+.+..+..... +........++++.+|+.+||+.||++|||+.++++
T Consensus       193 ~~k~DiwSlGvilyemltg~~Pf~~~~-~~~~~~~i~~~~~-~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         193 DYKADVWSLGITLIEMAEIEPPHHELN-PMRVLLKIAKSEP-PTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             TTHHHHHHHHHHHHHHHHSSCTTTTSC-GGGHHHHHHHSCC-CCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             ChhhhHHHHHHHHHHHhhCCCCCCCCC-HHHHHHHHHcCCC-CCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            899999999999999999988876443 3344444444332 222333456789999999999999999999999976

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-39  Score=225.15  Aligned_cols=147  Identities=16%  Similarity=0.215  Sum_probs=106.7

Q ss_pred             hHHHHHHHHhcC--CCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVG--FPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~--~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      |++.||+|||+.  ...+|+||||||+|||++.++.+||+|||+++.........  ....||+.|+|||.+.+..++.+
T Consensus       117 qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~--~~~~gt~~Y~APE~l~~~~~~~~  194 (269)
T d2java1         117 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA--KAFVGTPYYMSPEQMNRMSYNEK  194 (269)
T ss_dssp             HHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHH
T ss_pred             HHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCCcc--ccCCCCcccCCHHHHcCCCCChH
Confidence            899999999931  01249999999999999999999999999998775443322  23468999999999998899999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||||+||++|+++++..||.. ....++...+.......   .+...++++.+|+.+||+.||++|||+.++++
T Consensus       195 ~DIwSlGvilyel~tg~~Pf~~-~~~~~~~~~i~~~~~~~---~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         195 SDIWSLGCLLYELCALMPPFTA-FSQKELAGKIREGKFRR---IPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCC-SSHHHHHHHHHHTCCCC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHhhCHHHHHHhhCCCCCCC-CCHHHHHHHHHcCCCCC---CCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            9999999999999999888753 34445555554443321   12345678999999999999999999999875

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-39  Score=222.68  Aligned_cols=149  Identities=21%  Similarity=0.287  Sum_probs=117.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++++||||||+||+++.++.++++|||+++.......     ...++..|+|||.+.++.++.++|
T Consensus       111 ~i~~al~ylH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~-----~~~~~~~y~aPE~l~~~~~t~~sD  182 (262)
T d1byga_         111 DVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALREKKFSTKSD  182 (262)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHH
T ss_pred             HHHhhccccc---cCceeccccchHhheecCCCCEeecccccceecCCCCc-----cccccccCCChHHHhCCCCChHHH
Confidence            7999999999   89999999999999999999999999999976543322     235778999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      |||||+++||++++..+|+......++...+..+. .+  +.....++++.+++.+||+.||.+|||+.++++.|+++..
T Consensus       183 IwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~-~~--~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         183 VWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-KM--DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             HHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTC-CC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCC-CC--CCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            99999999999997666666656666655544332 12  2233456789999999999999999999999999998854

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-39  Score=227.95  Aligned_cols=141  Identities=24%  Similarity=0.346  Sum_probs=114.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc---CCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT---GDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~---~~~~~   78 (163)
                      ||+.||.|||   +++|+||||||+|||++.++.+||+|||++.......      ...||+.|+|||.+.+   +.|+.
T Consensus       123 qi~~aL~yLH---~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~------~~~GT~~Y~APE~~~~~~~~~y~~  193 (309)
T d1u5ra_         123 GALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------SFVGTPYWMAPEVILAMDEGQYDG  193 (309)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBC------CCCSCGGGCCHHHHTTTTSCCBCT
T ss_pred             HHHHHHHHHH---hCCEeccCCCcceEEECCCCCEEEeecccccccCCCC------ccccCccccCHHHHhccCCCCcCc
Confidence            8999999999   8999999999999999999999999999997654322      3469999999999864   45899


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+||++|++++|..||......+ .+..+.......  ......++.+.+|+.+||+.||++|||+.++++
T Consensus       194 ~~DiwSlGvilyel~~g~~Pf~~~~~~~-~~~~i~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         194 KVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPA--LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCC--CSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hhhhhhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhCCCCC--CCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            9999999999999999999876544433 333333332211  122345678999999999999999999999976

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=6.1e-39  Score=228.56  Aligned_cols=146  Identities=18%  Similarity=0.193  Sum_probs=122.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC--CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||+|||   +++++||||||+|||++  .++.+||+|||+++.........   ...||+.|||||.+.+..++.+
T Consensus       132 qi~~aL~ylH---~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~---~~~gT~~Y~aPEv~~~~~~~~~  205 (350)
T d1koaa2         132 QVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK---VTTGTAEFAAPEVAEGKPVGYY  205 (350)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEE---EECSCTTTCCHHHHHTCCBCHH
T ss_pred             HHHHHHHHHH---hcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccc---eecCcccccCHHHHcCCCCChh
Confidence            8999999999   89999999999999995  46889999999998776544332   3468999999999999999999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||||+||++|+|++|..||. .....+++..+...............++.+++|+.+||..||++|||+.++++
T Consensus       206 ~DiwSlGvilyell~G~~Pf~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         206 TDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSC-CSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HhhhhhhHHHHHHHhCCCCCC-CCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999988875 44455566666665555555555567789999999999999999999999987

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-38  Score=224.53  Aligned_cols=147  Identities=18%  Similarity=0.275  Sum_probs=118.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC---CCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE---DHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~---~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~   78 (163)
                      ||+.||+|||   +.+++||||||+|||++.   .+.+|++|||+++.........   ...||+.|+|||.+.+..|+.
T Consensus       119 qi~~al~ylH---~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~y~~  192 (335)
T d2ozaa1         119 SIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT---TPCYTPYYVAPEVLGPEKYDK  192 (335)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCC---CCSCCCSSCCCCCCCGGGGSH
T ss_pred             HHHHHHHHHH---HcCCccccccccccccccccccccccccccceeeeccCCCccc---cccCCcccCCcHHHcCCCCCH
Confidence            7999999999   899999999999999975   4679999999998766544332   346999999999999889999


Q ss_pred             ccceeecchhhHHHhhhccccccccch---hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTF---DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++||||+||++|++++|..||......   ..+...+......++.+.....++++.+|+.+||+.||++|||+.++++
T Consensus       193 ~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         193 SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            999999999999999999888654322   2233333334443444455567889999999999999999999999987

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=7.4e-39  Score=228.30  Aligned_cols=146  Identities=18%  Similarity=0.193  Sum_probs=122.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC--CCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD--EDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~--~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||+|||   +++|+||||||+|||++  .++.+||+|||++..........   ...+++.|+|||.+.+..++.+
T Consensus       135 qi~~aL~ylH---~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~  208 (352)
T d1koba_         135 QACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVK---VTTATAEFAAPEIVDREPVGFY  208 (352)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEE---EECSSGGGCCHHHHTTCCBCHH
T ss_pred             HHHHHHHHHH---HCCeeecccccccccccccCCCeEEEeecccceecCCCCcee---eccCcccccCHHHHcCCCCCCc
Confidence            7999999999   89999999999999997  67899999999998876544332   3368899999999999999999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||||+||++|+|++|..||.. ....+++..+......+........++++.+|+.+||+.||.+|||+.++++
T Consensus       209 ~DiwSlGvilyelltG~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         209 TDMWAIGVLGYVLLSGLSPFAG-EDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCC-SSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             cchHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999888754 3444555555555544444445567789999999999999999999999986

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1e-38  Score=221.30  Aligned_cols=156  Identities=18%  Similarity=0.285  Sum_probs=119.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+||+++.++..+++|||.+......... .......||+.|+|||.+.+..++.++
T Consensus       119 qi~~al~~lH---~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~  195 (277)
T d1o6ya_         119 DACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS  195 (277)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHH
T ss_pred             HHHHHHHHHH---hCCccCccccCcccccCccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcce
Confidence            8999999999   899999999999999999999999999998765433222 222345699999999999988999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-CHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-TMIDVAKQLRQA  159 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-t~~~i~~~L~~~  159 (163)
                      ||||+|+++|+|++|..||... ...+...........+........++.+.+++.+||+.||++|| |++++++.|.++
T Consensus       196 DiwSlGvilyelltG~~Pf~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         196 DVYSLGCVLYEVLTGEPPFTGD-SPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCS-SHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             ecccchHHHHHHHhCCCCCCCc-CHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            9999999999999998887543 33444444444444333334445678899999999999999999 899999999987


Q ss_pred             hh
Q 043958          160 YR  161 (163)
Q Consensus       160 ~~  161 (163)
                      .+
T Consensus       275 ~n  276 (277)
T d1o6ya_         275 HN  276 (277)
T ss_dssp             HC
T ss_pred             hC
Confidence            53

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-38  Score=220.62  Aligned_cols=146  Identities=21%  Similarity=0.242  Sum_probs=120.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC----CeEECccccccccCCCCCcccccCccccccccCccccccCCCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH----VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYN   77 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~----~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~   77 (163)
                      |++.||+|||   +.+++||||||+||+++.++    .+|++|||++..........   ...+++.|+|||.+.+..++
T Consensus       121 qi~~al~yLH---~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~---~~~~t~~y~APE~~~~~~~~  194 (293)
T d1jksa_         121 QILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLG  194 (293)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCS---CCCCCGGGCCHHHHTTCCBC
T ss_pred             HHHHHHHhhh---hcceeecccccceEEEecCCCcccceEecchhhhhhcCCCcccc---ccCCCCcccCHHHHcCCCCC
Confidence            7899999999   89999999999999998776    48999999998776544332   34688999999999988999


Q ss_pred             cccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           78 EKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        78 ~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++||||+||++|+|+++..||.. ....+.+..+...............+..+++|+.+||+.||++|||++++++
T Consensus       195 ~~~DiwSlGvilyell~g~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         195 LEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CcccchhhhHHHHHHHcCCCCCCC-CCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999888764 3444455555555444444444556788999999999999999999999986

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-37  Score=221.15  Aligned_cols=143  Identities=20%  Similarity=0.323  Sum_probs=118.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++++||||||+|||++.+|.+||+|||+++.........  ....||+.|+|||.+.+..|+.++|
T Consensus       113 qil~al~ylH---~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~--~~~~GT~~Y~aPE~~~~~~y~~~~D  187 (337)
T d1o6la_         113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM--KTFCGTPEYLAPEVLEDNDYGRAVD  187 (337)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCB--CCCEECGGGCCGGGGSSSCBCTTHH
T ss_pred             HHhhhhhhhh---hcCccccccCHHHeEecCCCCEEEeecccccccccCCccc--ccceeCHHHhhhhhccCCCCChhhc
Confidence            7999999999   8999999999999999999999999999998665433222  2456999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||+||++|+|++|..||.. ....++...+......++    ...++++++||.+||+.||++|++     +.++++
T Consensus       188 iwSlGvilyeml~G~~pf~~-~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         188 WWGLGVVMYEMMCGRLPFYN-QDHERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ccchhhHHHHHHHCCCCCCC-cCHHHHHHHHhcCCCCCC----ccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            99999999999999877764 445556665555543332    245678999999999999999995     777765

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-38  Score=224.81  Aligned_cols=150  Identities=15%  Similarity=0.229  Sum_probs=111.7

Q ss_pred             hHHHHHHHHhcCCCC-CeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCccc
Q 043958            2 EIANALAYLHVGFPR-PIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~-~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~   80 (163)
                      |++.||.|||   ++ +|+||||||+|||++.++.+||+|||+|+.......    ....||+.|+|||.+.+.+|+.++
T Consensus       112 qil~aL~yLH---~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~----~~~~GT~~Y~APEvl~~~~y~~~~  184 (322)
T d1s9ja_         112 AVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA----NSFVGTRSYMSPERLQGTHYSVQS  184 (322)
T ss_dssp             HHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC-------CCSSCCCCHHHHHCSCCCTTH
T ss_pred             HHHHHHHHHH---HhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCcc----ccccCCccccCchHHcCCCCCcHH
Confidence            8999999999   64 899999999999999999999999999976543221    234799999999999999999999


Q ss_pred             ceeecchhhHHHhhhccccccccchhh--ccchhhhhh-------------------------------------hcccc
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDE--IVDPVIREE-------------------------------------LCIQS  121 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~-------------------------------------~~~~~  121 (163)
                      ||||+||++++|++|..||........  .......+.                                     ..++.
T Consensus       185 DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (322)
T d1s9ja_         185 DIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPK  264 (322)
T ss_dssp             HHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCC
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCcc
Confidence            999999999999999988865332110  000000000                                     00000


Q ss_pred             hhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH--HHHH
Q 043958          122 SEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK--QLRQ  158 (163)
Q Consensus       122 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~--~L~~  158 (163)
                      ......+.++.+|+.+||..||++|||++++++  ++++
T Consensus       265 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         265 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             CCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             CccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence            001123467999999999999999999999987  4554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-37  Score=217.96  Aligned_cols=161  Identities=17%  Similarity=0.217  Sum_probs=116.4

Q ss_pred             ChHHHHHHHHhcC-----CCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcc--cccCccccccccCcccccc
Q 043958            1 MEIANALAYLHVG-----FPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHI--KDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         1 ~qi~~~l~~lh~~-----~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~   73 (163)
                      +|++.||+|+|..     ..++|+||||||+|||++.++.+||+|||+++.........  ......||+.|+|||++.+
T Consensus       107 ~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  186 (303)
T d1vjya_         107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  186 (303)
T ss_dssp             HHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccc
Confidence            3789999999931     12699999999999999999999999999998775543322  2234579999999999875


Q ss_pred             CC------CCcccceeecchhhHHHhhhccccccccch--------------hhccchhhhhhhcc---cchhhHHHHHH
Q 043958           74 GD------YNEKCDVFSFAGDRHWLLNRVKKHIECNTF--------------DEIVDPVIREELCI---QSSEKDKQVQA  130 (163)
Q Consensus        74 ~~------~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~---~~~~~~~~~~~  130 (163)
                      ..      ++.++|||||||++||++++..++......              ....+........+   ...........
T Consensus       187 ~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  266 (303)
T d1vjya_         187 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRV  266 (303)
T ss_dssp             CSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHH
T ss_pred             cccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHH
Confidence            42      567899999999999999987654321111              11111111111111   11123346677


Q ss_pred             HHHHHHhccccCcCCCCCHHHHHHHHHHHhh
Q 043958          131 FVELAVKCVSESAEDRPTMIDVAKQLRQAYR  161 (163)
Q Consensus       131 ~~~li~~cl~~~p~~Rpt~~~i~~~L~~~~~  161 (163)
                      +.+++.+||+.||++|||+.++++.|+++.+
T Consensus       267 l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  297 (303)
T d1vjya_         267 MAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             HHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999999998864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-37  Score=218.78  Aligned_cols=140  Identities=24%  Similarity=0.357  Sum_probs=117.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++|+||||||+|||++.+|.+||+|||+++.......     ...||+.|+|||.+.+..++.++|
T Consensus       112 qi~~al~~lH---~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~-----~~~Gt~~Y~APE~l~~~~y~~~~D  183 (316)
T d1fota_         112 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTY-----TLCGTPDYIAPEVVSTKPYNKSID  183 (316)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBC-----CCCSCTTTCCHHHHTTCCBCTTHH
T ss_pred             HHHHhhhhhc---cCcEEccccCchheeEcCCCCEEEecCccceEeccccc-----cccCcccccCHHHHcCCCCCchhh
Confidence            7999999999   99999999999999999999999999999987654322     346999999999999889999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      |||+||++|+|++|..||.. ....++...+.......+    ...++++.+++.+||..||.+|+     |++++++
T Consensus       184 iwSlGvilyemltG~~Pf~~-~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         184 WWSFGILIYEMLAGYTPFYD-SNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             ccccchhHHHHHhCCCCCCC-cCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            99999999999999888764 344455555555543222    23457899999999999999996     8888876

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-37  Score=221.60  Aligned_cols=140  Identities=14%  Similarity=0.215  Sum_probs=116.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +++|+||||||+|||++.+|.+||+|||+++......     ....||+.|||||.+.+..++.++|
T Consensus       149 qi~~aL~yLH---~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~-----~~~~Gt~~Y~APE~~~~~~~~~~~D  220 (350)
T d1rdqe_         149 QIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WTLCGTPEALAPEIILSKGYNKAVD  220 (350)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB-----CCCEECGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---hCCEecCcCCHHHcccCCCCCEEeeeceeeeeccccc-----ccccCccccCCHHHHcCCCCCcccc
Confidence            7999999999   8999999999999999999999999999998765432     2346999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCC-----CHHHHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRP-----TMIDVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp-----t~~~i~~  154 (163)
                      |||+||++|+|++|..||... ....+...+.......    +...++.+.+++.+||..||.+|+     |++++++
T Consensus       221 iwSlGvilyemltG~~Pf~~~-~~~~~~~~i~~~~~~~----p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         221 WWALGVLIYEMAAGYPPFFAD-QPIQIYEKIVSGKVRF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHCCCCC----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ccchhHHHHHHHhCCCCCCCc-CHHHHHHHHhcCCCCC----CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            999999999999998887643 4444555555444322    224567899999999999999994     8999876

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-37  Score=215.94  Aligned_cols=157  Identities=13%  Similarity=0.200  Sum_probs=118.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeC---CCCCeEECccccccccCCCCCc-----ccccCccccccccCcccccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFD---EDHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYVTT   73 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~---~~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~~~   73 (163)
                      |++.||+|||   +++|+||||||+|||++   .+..++++|||+++........     .......||+.|+|||.+.+
T Consensus       111 qi~~~l~~lH---~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  187 (299)
T d1ckia_         111 QMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLG  187 (299)
T ss_dssp             HHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTT
T ss_pred             HHHHHHHHHH---HCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhC
Confidence            7899999999   89999999999999985   4457999999999877544322     12234579999999999998


Q ss_pred             CCCCcccceeecchhhHHHhhhccccccccchhhccc--hhhhhhhccc-chhhHHHHHHHHHHHHhccccCcCCCCCHH
Q 043958           74 GDYNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVD--PVIREELCIQ-SSEKDKQVQAFVELAVKCVSESAEDRPTMI  150 (163)
Q Consensus        74 ~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~  150 (163)
                      ..++.++|||||||+++++++|..||...........  .........+ ......+++++.+++..||+.+|++||++.
T Consensus       188 ~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~  267 (299)
T d1ckia_         188 IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYS  267 (299)
T ss_dssp             BCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHH
T ss_pred             CCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHH
Confidence            8999999999999999999999888765433222111  1111111111 111234568899999999999999999999


Q ss_pred             HHHHHHHHHhh
Q 043958          151 DVAKQLRQAYR  161 (163)
Q Consensus       151 ~i~~~L~~~~~  161 (163)
                      ++.+.|+++..
T Consensus       268 ~i~~~l~~~~~  278 (299)
T d1ckia_         268 YLRQLFRNLFH  278 (299)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999988753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.6e-37  Score=222.26  Aligned_cols=142  Identities=23%  Similarity=0.288  Sum_probs=112.1

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc-CCCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT-GDYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+|||++.+|.+||+|||+++........    ...||+.|+|||.+.. ..++.++
T Consensus       115 qi~~aL~ylH---~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~----~~~GT~~y~APE~~~~~~~~~~~~  187 (364)
T d1omwa3         115 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----ASVGTHGYMAPEVLQKGVAYDSSA  187 (364)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCC----SCCSCGGGCCHHHHSTTCCCCTHH
T ss_pred             HHHHHHHHHH---HCCccceeeccceeEEcCCCcEEEeeeceeeecCCCccc----ccccccccchhHHhhcCCCCCccc
Confidence            7999999999   899999999999999999999999999999876544322    3469999999999875 4689999


Q ss_pred             ceeecchhhHHHhhhccccccccch--hhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTF--DEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVA  153 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~  153 (163)
                      ||||+||++|+|++|..||......  ..+.......    ....+...++++.+||.+||+.||++|||     +++++
T Consensus       188 DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil  263 (364)
T d1omwa3         188 DWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM----AVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  263 (364)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSC----CCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHH
T ss_pred             chhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccC----CCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHH
Confidence            9999999999999999887643321  1111111111    12222345678999999999999999999     67776


Q ss_pred             H
Q 043958          154 K  154 (163)
Q Consensus       154 ~  154 (163)
                      +
T Consensus       264 ~  264 (364)
T d1omwa3         264 E  264 (364)
T ss_dssp             T
T ss_pred             c
Confidence            5

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.8e-37  Score=214.69  Aligned_cols=146  Identities=20%  Similarity=0.233  Sum_probs=121.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCcccccc------CC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTT------GD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~------~~   75 (163)
                      ||+.||+|||   .++++||||||+||+++.++.+||+|||+++.........   ...||..|+|||.+.+      ..
T Consensus       118 qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~---~~~gt~~y~~PE~~~~~~~~~~~~  191 (277)
T d1phka_         118 ALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPEIIECSMNDNHPG  191 (277)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBC---CCCSCGGGCCHHHHHHHHCTTSCC
T ss_pred             HHHHHHHHHH---HcCCcccccccceEEEcCCCCeEEccchheeEccCCCcee---eeeccCCCCCHHHhhccccccCCC
Confidence            8999999999   8999999999999999999999999999998776543322   3468999999998863      34


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ++.++||||+||+++++++|..||... ...+....+..+......+.....++++++|+.+||+.||++|||++++++
T Consensus       192 ~~~~~DiwslGvilyeml~g~~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         192 YGKEVDMWSTGVIMYTLLAGSPPFWHR-KQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCSSCCS-SHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             CCchheEcccchhhhhhccCCCCCCCC-CHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            688999999999999999998887644 444455556666555555556678899999999999999999999999876

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-38  Score=219.05  Aligned_cols=146  Identities=16%  Similarity=0.178  Sum_probs=113.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.||+|||   +++|+||||||+|||++.++.+|++|||++........   .....||+.|+|||.+.+.+|+.++|
T Consensus       124 qi~~aL~yLH---~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~---~~~~~gT~~Y~APE~~~~~~y~~~~D  197 (305)
T d1blxa_         124 QLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA---LTSVVVTLWYRAPEVLLQSSYATPVD  197 (305)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGG---GCCCCCCCTTCCHHHHTTCCCCTHHH
T ss_pred             HHHHHHHHHH---hCCEEecCCCccEEEEcCCCCeeecchhhhhhhccccc---CCCcccChhhcCcchhcCCCCChheh
Confidence            7899999999   89999999999999999999999999999865543322   22457999999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhh-----------------------hhcccchhhHHHHHHHHHHHHhc
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-----------------------ELCIQSSEKDKQVQAFVELAVKC  138 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~li~~c  138 (163)
                      |||+||++++|++|..||......+ .+..+...                       ............++.+.+|+.+|
T Consensus       198 iwSlG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~m  276 (305)
T d1blxa_         198 LWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKC  276 (305)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred             hhchHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHH
Confidence            9999999999999988876443222 11111100                       00000111223457889999999


Q ss_pred             cccCcCCCCCHHHHHH
Q 043958          139 VSESAEDRPTMIDVAK  154 (163)
Q Consensus       139 l~~~p~~Rpt~~~i~~  154 (163)
                      |+.||++|||+.|+++
T Consensus       277 L~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         277 LTFNPAKRISAYSALS  292 (305)
T ss_dssp             SCSSTTTSCCHHHHHT
T ss_pred             CcCChhHCcCHHHHhc
Confidence            9999999999999987

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-37  Score=214.07  Aligned_cols=147  Identities=20%  Similarity=0.157  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+||+|||+++..........  ...+|+.|+|||.+.+. .++.++
T Consensus       108 qil~aL~~lH---~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~~  182 (299)
T d1ua2a_         108 MTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYT--HQVVTRWYRAPELLFGARMYGVGV  182 (299)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCC--CSCCCCTTCCHHHHTTCSCCCHHH
T ss_pred             HHHHHHHHhh---ccceecccCCcceEEecCCCccccccCccccccCCCccccc--ceecChhhccHHHHccCCCCChhh
Confidence            8999999999   89999999999999999999999999999977654433222  34689999999988754 579999


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhh---------------------cccc---hhhHHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREEL---------------------CIQS---SEKDKQVQAFVELAV  136 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~---~~~~~~~~~~~~li~  136 (163)
                      ||||+||++++|++|..||......+ .+..+...-.                     ....   ......++.+.+|+.
T Consensus       183 DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~  261 (299)
T d1ua2a_         183 DMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQ  261 (299)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHH
T ss_pred             hhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHH
Confidence            99999999999999987765433222 2211111000                     0000   011134578999999


Q ss_pred             hccccCcCCCCCHHHHHH
Q 043958          137 KCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       137 ~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||+.||++|||++|+++
T Consensus       262 ~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         262 GLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHHCSSTTTSCCHHHHHT
T ss_pred             HHccCChhhCcCHHHHhC
Confidence            999999999999999986

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-37  Score=216.46  Aligned_cols=146  Identities=15%  Similarity=0.264  Sum_probs=120.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC--CCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED--HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~   79 (163)
                      ||+.||+|||   +++|+||||||+|||++.+  ..++++|||++..........   ...+++.|++||...+..++.+
T Consensus       110 qi~~al~yLH---~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~---~~~~t~~y~ape~~~~~~~~~~  183 (321)
T d1tkia_         110 QVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFR---LLFTAPEYYAPEVHQHDVVSTA  183 (321)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEE---EEESCGGGSCHHHHTTCEECHH
T ss_pred             HHHHHHHHHH---HcCCCcccccccceeecCCCceEEEEcccchhhccccCCccc---ccccccccccchhccCCCCCch
Confidence            7999999999   8999999999999999754  478999999998765443322   3468889999999998889999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||||+||++|+|++|..||.. ....+++..+......+........++++++|+.+||..||++|||+.++++
T Consensus       184 ~DiWSlGvily~ll~G~~Pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         184 TDMWSLGTLVYVLLSGINPFLA-ETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCC-SSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             hhcccHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999887754 4445566666666554444444456788999999999999999999999987

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-37  Score=211.81  Aligned_cols=135  Identities=19%  Similarity=0.230  Sum_probs=108.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCC-CCeEECccccccccCCCCCcccccCccccccccCccccccCCC-Ccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDED-HVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDY-NEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~-~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~-~~~   79 (163)
                      |++.||+|||   +++++||||||+||+++.+ +.+|++|||++........    ....||+.|+|||.+.+..+ +.+
T Consensus       118 qi~~al~~lH---~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~----~~~~GT~~y~aPE~~~~~~~~~~~  190 (273)
T d1xwsa_         118 QVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY----TDFDGTRVYSPPEWIRYHRYHGRS  190 (273)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCB----CCCCSCGGGSCHHHHHHSCBCHHH
T ss_pred             HHHHHHHHHH---HCCCccccCcccceEEecCCCeEEECccccceecccccc----cccccCCCcCCHHHHcCCCCCCcc
Confidence            8999999999   8999999999999999855 7899999999976544322    23469999999999987775 567


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +||||+||++|++++|..||.....       +.......+    ...++++++|+.+||+.||++|||++|+++
T Consensus       191 ~DiwSlGvilyell~g~~Pf~~~~~-------i~~~~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         191 AAVWSLGILLYDMVCGDIPFEHDEE-------IIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCSHHH-------HHHCCCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cccccceeeehhHhhCCCCCCCchH-------HhhcccCCC----CCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            9999999999999999988754321       112221111    234578999999999999999999999987

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-36  Score=214.65  Aligned_cols=143  Identities=23%  Similarity=0.308  Sum_probs=116.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||+|||   +++++||||||+|||++.++.+|++|||+++..........  ...||+.|+|||.+.+..++.++|
T Consensus       111 qi~~al~ylH---~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~D  185 (320)
T d1xjda_         111 EIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTN--TFCGTPDYIAPEILLGQKYNHSVD  185 (320)
T ss_dssp             HHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBC--CCCSCGGGCCHHHHTTCCBCTHHH
T ss_pred             HHHHHHHHHH---hCCeeeccCcccceeecCCCceeccccchhhhccccccccc--ccCCCCCcCCHHHHcCCCCCchhh
Confidence            7999999999   89999999999999999999999999999976654333222  346899999999999999999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHH-HHHH
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMI-DVAK  154 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~-~i~~  154 (163)
                      |||+||++|+|++|..||.. ....++...+....+..+    ...++++.+|+.+||..||++|||+. ++++
T Consensus       186 iwSlGvilyemltG~~PF~~-~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~  254 (320)
T d1xjda_         186 WWSFGVLLYEMLIGQSPFHG-QDEEELFHSIRMDNPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ  254 (320)
T ss_dssp             HHHHHHHHHHHHHSSCSSCC-SSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred             hhhhhHHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCCC----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHh
Confidence            99999999999999888754 344455555554443222    23567899999999999999999985 6653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.1e-35  Score=207.39  Aligned_cols=157  Identities=9%  Similarity=0.104  Sum_probs=119.8

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCC-----CCCeEECccccccccCCCCCc-----ccccCccccccccCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDE-----DHVAKLFDFSLAESIPDGETH-----IKDAIPIGIMGFVATEYV   71 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~-----~~~~~l~dfg~~~~~~~~~~~-----~~~~~~~~~~~~~~PE~~   71 (163)
                      |++.||+|||   +++++||||||+||+++.     ++.++++|||+++........     .......||+.|||||.+
T Consensus       109 q~~~~l~~lH---~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~  185 (293)
T d1csna_         109 QMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTH  185 (293)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred             HHHHHHHHHH---HCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHh
Confidence            7899999999   999999999999999964     578999999999876543222     122345799999999999


Q ss_pred             ccCCCCcccceeecchhhHHHhhhccccccccch--hhccchhhhhhhcc-cchhhHHHHHHHHHHHHhccccCcCCCCC
Q 043958           72 TTGDYNEKCDVFSFAGDRHWLLNRVKKHIECNTF--DEIVDPVIREELCI-QSSEKDKQVQAFVELAVKCVSESAEDRPT  148 (163)
Q Consensus        72 ~~~~~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  148 (163)
                      .+..++.++|+||+|++++++++|..|+......  ......+....... .......+++++.+++..|++.+|++||+
T Consensus       186 ~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~  265 (293)
T d1csna_         186 LGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPD  265 (293)
T ss_dssp             TTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCC
T ss_pred             cCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcC
Confidence            9989999999999999999999999887643321  11222222221111 11112345678999999999999999999


Q ss_pred             HHHHHHHHHHHhh
Q 043958          149 MIDVAKQLRQAYR  161 (163)
Q Consensus       149 ~~~i~~~L~~~~~  161 (163)
                      ++.+.+.|+++.+
T Consensus       266 y~~l~~~l~~~~~  278 (293)
T d1csna_         266 YDYLQGLFSKVLE  278 (293)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999888754

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-35  Score=207.94  Aligned_cols=147  Identities=15%  Similarity=0.172  Sum_probs=111.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      |++.||+|||   +++|+||||||+|||++.++.+|++|||+++..........  ...||+.|+|||.+.... ++.++
T Consensus       110 qil~~L~yLH---~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~--~~~gt~~y~apE~~~~~~~~~~~~  184 (298)
T d1gz8a_         110 QLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT--HEVVTLWYRAPEILLGCKYYSTAV  184 (298)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTT--CCBCCCTTCCHHHHTTCSSCCTHH
T ss_pred             HHHHHHHHhh---cCCEEccccCchheeecccCcceeccCCcceeccCCcccce--eecccceeeehhhhccccCCCccc
Confidence            8999999999   89999999999999999999999999999987754433322  346899999999887666 47899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh--------------------hh-cc-c---chhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE--------------------EL-CI-Q---SSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------------------~~-~~-~---~~~~~~~~~~~~~li  135 (163)
                      |+||+|++++++++|..||......+. +..+...                    .. .. .   .......+.++.+|+
T Consensus       185 DiwSlGvily~m~~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll  263 (298)
T d1gz8a_         185 DIWSLGCIFAEMVTRRALFPGDSEIDQ-LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLL  263 (298)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHH
T ss_pred             cccccchhhhHHhhCCCCCCCCCHHHH-HHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHH
Confidence            999999999999999888754332221 1111000                    00 00 0   001113447899999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||..||++|||+.|+++
T Consensus       264 ~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         264 SQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             HHHTCSSTTTSCCHHHHHT
T ss_pred             HHHccCChhHCcCHHHHhC
Confidence            9999999999999999987

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-35  Score=208.28  Aligned_cols=146  Identities=23%  Similarity=0.275  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcccccCccccccccCccccccC-CCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~   79 (163)
                      ||+.||+|||   +++|+||||||+|||++.++ .+||+|||++..........   ...|+..|+|||.+.+. .++.+
T Consensus       130 qil~aL~yLH---~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~  203 (350)
T d1q5ka_         130 QLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPELIFGATDYTSS  203 (350)
T ss_dssp             HHHHHHHHHH---TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCC---SCCSCTTSCCHHHHTTCSSCCTH
T ss_pred             HHHHHHHHHH---hcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccc---cccccccccChHHhhcccCCCcc
Confidence            8999999999   99999999999999999775 89999999998765443322   34688999999988754 68999


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhh-------------------hhc------ccchhhHHHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------ELC------IQSSEKDKQVQAFVEL  134 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~------~~~~~~~~~~~~~~~l  134 (163)
                      +||||+||+++++++|..||......+. +..+...                   ...      .........++++.+|
T Consensus       204 ~DIwSlG~il~el~~g~~pf~~~~~~~~-l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL  282 (350)
T d1q5ka_         204 IDVWSAGCVLAELLLGQPIFPGDSGVDQ-LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL  282 (350)
T ss_dssp             HHHHHHHHHHHHHHHTSCSSCCSSHHHH-HHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHH
T ss_pred             eeecccceEEEehhhCCCCCCCCCHHHH-HHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHH
Confidence            9999999999999999888764433221 1111100                   000      0000112345789999


Q ss_pred             HHhccccCcCCCCCHHHHHH
Q 043958          135 AVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       135 i~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+||..||++|||+.|+++
T Consensus       283 l~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         283 CSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999986

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-35  Score=205.50  Aligned_cols=149  Identities=16%  Similarity=0.139  Sum_probs=109.3

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc--ccccCccccccccCccccccC-CCCc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH--IKDAIPIGIMGFVATEYVTTG-DYNE   78 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~-~~~~   78 (163)
                      |++.||.|||   +++|+||||||+|||++.++.+|++|||++.........  .......||+.|+|||.+.+. .++.
T Consensus       125 qil~~l~~lH---~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~  201 (318)
T d3blha1         125 MLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP  201 (318)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCT
T ss_pred             HHHHHHHHhc---cCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCc
Confidence            7999999999   899999999999999999999999999999766543222  122234689999999998765 5889


Q ss_pred             ccceeecchhhHHHhhhccccccccchhhccchhhhhhhc-----------------------ccchh-----hHHHHHH
Q 043958           79 KCDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC-----------------------IQSSE-----KDKQVQA  130 (163)
Q Consensus        79 ~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~-----~~~~~~~  130 (163)
                      ++||||+||+++++++|..||....... ....+......                       .....     ....++.
T Consensus       202 k~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (318)
T d3blha1         202 PIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPY  280 (318)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHH
T ss_pred             HHHcccCCceeeeHhhCCCCCCCCCHHH-HHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHH
Confidence            9999999999999999987775433211 11111000000                       00000     1122457


Q ss_pred             HHHHHHhccccCcCCCCCHHHHHH
Q 043958          131 FVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       131 ~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +.+|+.+||+.||++|||++|+++
T Consensus       281 ~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         281 ALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHCcCChhHCcCHHHHHc
Confidence            889999999999999999999986

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-35  Score=207.90  Aligned_cols=149  Identities=16%  Similarity=0.170  Sum_probs=111.0

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCc-ccccCccccccccCcccccc-CCCCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETH-IKDAIPIGIMGFVATEYVTT-GDYNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~-~~~~~~   79 (163)
                      |++.||+|||   +++|+||||||+|||++.++.+||+|||++......... .......+++.|+|||.+.. ..++.+
T Consensus       117 qil~al~yLH---~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~  193 (345)
T d1pmea_         117 QILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS  193 (345)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTH
T ss_pred             HHHHHHHHHH---HCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCch
Confidence            8999999999   899999999999999999999999999999766543222 22234568999999998854 457889


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhh----------------------hc--ccc---hhhHHHHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREE----------------------LC--IQS---SEKDKQVQAFV  132 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~--~~~---~~~~~~~~~~~  132 (163)
                      +|+||+||+++++++|..||......+.. .......                      ..  ...   ......+++++
T Consensus       194 ~DiwSlG~il~eml~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  272 (345)
T d1pmea_         194 IDIWSVGCILAEMLSNRPIFPGKHYLDQL-NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL  272 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHH-HHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHH
T ss_pred             hhhhccCceehHHhhCCCCCCCCCHHHHH-HHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHH
Confidence            99999999999999998887644322111 1100000                      00  000   01112346789


Q ss_pred             HHHHhccccCcCCCCCHHHHHH
Q 043958          133 ELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       133 ~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      +|+.+||+.||++|||+.++++
T Consensus       273 ~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         273 DLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999999986

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-35  Score=206.99  Aligned_cols=148  Identities=22%  Similarity=0.229  Sum_probs=114.6

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC--CCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD--YNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~   79 (163)
                      |++.||+|+|   +++++||||||+||+++.++.++|+|||+++........... ...+++.|++||.+.+..  ++.+
T Consensus       137 Qi~~al~~lH---~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~~-~~~g~~~~~~pe~~~~~~~~~~~k  212 (322)
T d1vzoa_         137 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY-DFCGTIEYMAPDIVRGGDSGHDKA  212 (322)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGGC-GGGSCCTTCCHHHHTTCC---CTH
T ss_pred             HHHHHHHHhh---cCCEEeccCCccceeecCCCCEEEeeccchhhhccccccccc-ccccccccchhHHhhcCCcCCCch
Confidence            7999999999   899999999999999999999999999999876544333222 446889999999997653  6779


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCC-----HHHHHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPT-----MIDVAK  154 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt-----~~~i~~  154 (163)
                      +||||+||++++|++|..||.... ..+..............+.....++.+.+++.+||+.||++|||     ++|+++
T Consensus       213 sDIWSlG~iLyelltG~~PF~~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         213 VDWWSLGVLMYELLTGASPFTVDG-EKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTSCTT-SCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCC-HHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            999999999999999998876433 22233333333222223333356789999999999999999994     788875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=205.24  Aligned_cols=144  Identities=19%  Similarity=0.215  Sum_probs=110.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      |++.||+|||   +++|+||||||+|||++.++.+|++|||+++.......     ...+++.|+|||.+.+. .++.++
T Consensus       129 qi~~aL~~LH---~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~t~~y~aPE~~~~~~~~~~~~  200 (346)
T d1cm8a_         129 QMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMT-----GYVVTRWYRAPEVILNWMRYTQTV  200 (346)
T ss_dssp             HHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCC-----SSCSCGGGCCTHHHHTTTCCCTTH
T ss_pred             HHHHHHHHHH---hCCCcccccCcchhhcccccccccccccceeccCCccc-----cccccccccCHHHHcCCCCCCccc
Confidence            7899999999   89999999999999999999999999999977654332     34688999999998764 468899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhc---------------------------ccchhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC---------------------------IQSSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~  133 (163)
                      ||||+||+++++++|..|+........+ .........                           .........++.+.+
T Consensus       201 DiwSlGvil~ell~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  279 (346)
T d1cm8a_         201 DIWSVGCIMAEMITGKTLFKGSDHLDQL-KEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVN  279 (346)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHH-HHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHH
T ss_pred             hhhcchHHHHHHHHCcCCCCCCChHHHH-HHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHH
Confidence            9999999999999998887654332211 111000000                           000011234567899


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+.+||..||++|||+.++++
T Consensus       280 li~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         280 LLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             HHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHCcCChhHCcCHHHHhc
Confidence            999999999999999999987

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.6e-35  Score=203.23  Aligned_cols=147  Identities=18%  Similarity=0.191  Sum_probs=107.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccC-CCCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTG-DYNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~   80 (163)
                      ||+.||+|||   +.+|+||||||+|||++.++.+|++|||.+...........  ...+++.|+|||.+.+. .++.++
T Consensus       108 qi~~~L~~LH---~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~--~~~~~~~y~~pE~~~~~~~~~~~~  182 (286)
T d1ob3a_         108 QLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT--HEIVTLWYRAPDVLMGSKKYSTTI  182 (286)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHH
T ss_pred             HHHHHHHHhc---cCcEEecCCCCceeeEcCCCCEEecccccceecccCccccc--eecccchhhhHHHHhCCCCCCcce
Confidence            7899999999   89999999999999999999999999999977654332222  33578899999998765 468899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhh-------------------------hhcccchhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIRE-------------------------ELCIQSSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~li  135 (163)
                      |+||+||+++++++|..||......+ .+..+...                         ............++.+.+|+
T Consensus       183 DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli  261 (286)
T d1ob3a_         183 DIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLL  261 (286)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHH
T ss_pred             eehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHH
Confidence            99999999999999988875433221 11111100                         00000011123457899999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||++|||++|+++
T Consensus       262 ~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         262 SKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             HHHTCSSTTTSCCHHHHHT
T ss_pred             HHHccCChhHCcCHHHHhc
Confidence            9999999999999999985

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-34  Score=199.22  Aligned_cols=148  Identities=14%  Similarity=0.146  Sum_probs=113.9

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      |++.||+|||   +++|+||||||+|||++.++.+|++|||.++..........  ...++..|+|||.+.+.. ++.++
T Consensus       109 q~~~aL~~lH---~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~--~~~~~~~~~~pe~~~~~~~~~~~~  183 (292)
T d1unla_         109 QLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS--AEVVTLWYRPPDVLFGAKLYSTSI  183 (292)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCC--SCCSCGGGCCHHHHTTCSCCCTHH
T ss_pred             HHHHHHHHhh---cCCEeeecccCcccccccCCceeeeecchhhcccCCCccce--eeccccchhhhhHhccCCCCCchh
Confidence            7899999999   89999999999999999999999999999987765443322  234677899999887665 68899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhc-------------------------ccchhhHHHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELC-------------------------IQSSEKDKQVQAFVELA  135 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~li  135 (163)
                      ||||+||++++++++..|++......+.+..+......                         .........++.+.+|+
T Consensus       184 DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll  263 (292)
T d1unla_         184 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL  263 (292)
T ss_dssp             HHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHH
T ss_pred             hccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHH
Confidence            99999999999999999987655544333322111000                         00111123456899999


Q ss_pred             HhccccCcCCCCCHHHHHH
Q 043958          136 VKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       136 ~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .+||+.||.+|||++|+++
T Consensus       264 ~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         264 QNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HHHSCSSGGGSCCHHHHTT
T ss_pred             HHHccCChhHCcCHHHHhc
Confidence            9999999999999999986

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.98  E-value=7.5e-34  Score=200.91  Aligned_cols=147  Identities=18%  Similarity=0.248  Sum_probs=110.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCC-CeEECccccccccCCCCCcccccCccccccccCccccccCC-CCcc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDH-VAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEK   79 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~-~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~   79 (163)
                      ||+.||+|||   +++|+||||||+|||++.++ .++++|||++..........   ...+|..|+|||.+.+.. ++.+
T Consensus       137 qil~aL~~LH---~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~---~~~~t~~y~aPE~~~~~~~~~~~  210 (328)
T d3bqca1         137 EILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYN---VRVASRYFKGPELLVDYQMYDYS  210 (328)
T ss_dssp             HHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCC---SCCSCGGGCCHHHHTTCCCCCTH
T ss_pred             HHHHHHHHHh---hcccccccccccceEEcCCCCeeeecccccceeccCCCccc---ccccCccccCcccccCCCCCCcc
Confidence            8999999999   89999999999999998655 58999999998765543322   346889999999987654 7899


Q ss_pred             cceeecchhhHHHhhhccccccccchhhccchhhh---------------------------------hhhcccchhhHH
Q 043958           80 CDVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIR---------------------------------EELCIQSSEKDK  126 (163)
Q Consensus        80 ~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~  126 (163)
                      +|+||+||++++++++..|+.......+....+..                                 ............
T Consensus       211 ~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (328)
T d3bqca1         211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL  290 (328)
T ss_dssp             HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGG
T ss_pred             cchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhccccccccc
Confidence            99999999999999999887654332111100000                                 000011112233


Q ss_pred             HHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          127 QVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       127 ~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      .++++.+|+.+||..||++|||++|+++
T Consensus       291 ~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         291 VSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            5578999999999999999999999987

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.2e-33  Score=198.06  Aligned_cols=146  Identities=18%  Similarity=0.180  Sum_probs=105.7

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      ||+.||.|||   +.+|+||||||+|||++.++.++++|||+++.........   ...+|+.|+|||.+.+..++.++|
T Consensus       127 qil~gl~~LH---~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~---~~~~t~~y~aPE~l~~~~~~~~~D  200 (355)
T d2b1pa1         127 QMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMT---PYVVTRYYRAPEVILGMGYKENVD  200 (355)
T ss_dssp             HHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHH
T ss_pred             HHHHHHHHhh---hcccccccCCccccccccccceeeechhhhhccccccccc---cccccccccChhhhcCCCCCCCcc
Confidence            7899999999   8999999999999999999999999999987665443322   336889999999999989999999


Q ss_pred             eeecchhhHHHhhhccccccccchhhccchhh----------------------h----------------hhhcccchh
Q 043958           82 VFSFAGDRHWLLNRVKKHIECNTFDEIVDPVI----------------------R----------------EELCIQSSE  123 (163)
Q Consensus        82 v~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~----------------------~----------------~~~~~~~~~  123 (163)
                      +||+||+++++++|..||....... ....+.                      .                .........
T Consensus       201 iwSlG~~l~ell~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (355)
T d2b1pa1         201 IWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEH  279 (355)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHH
T ss_pred             cccccchHHHHhhCCCCCCCCCHHH-HHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccc
Confidence            9999999999999987765332111 111000                      0                000111122


Q ss_pred             hHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          124 KDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       124 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ....++.+.+|+++||..||++|||++|+++
T Consensus       280 ~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         280 NKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            3456788999999999999999999999986

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-32  Score=196.13  Aligned_cols=144  Identities=21%  Similarity=0.208  Sum_probs=105.5

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCC-CCccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD-YNEKC   80 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~   80 (163)
                      ||+.||+|||   +++|+||||||+|||++.++.++++|||++.......     ....|+..|+|||...+.. ++.++
T Consensus       129 qil~aL~~LH---~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~-----~~~~g~~~y~apE~~~~~~~~~~~~  200 (348)
T d2gfsa1         129 QILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM-----TGYVATRWYRAPEIMLNWMHYNQTV  200 (348)
T ss_dssp             HHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGG-----SSSCHHHHTSCHHHHTTCSCCCTTH
T ss_pred             HHHHHHHHHH---hCCCcccccCCccccccccccccccccchhcccCccc-----ccccccccccCchhhcCCccCCccc
Confidence            7999999999   8999999999999999999999999999985543221     2346889999999877654 68899


Q ss_pred             ceeecchhhHHHhhhccccccccchhhccchhhhhhhccc---------------------------chhhHHHHHHHHH
Q 043958           81 DVFSFAGDRHWLLNRVKKHIECNTFDEIVDPVIREELCIQ---------------------------SSEKDKQVQAFVE  133 (163)
Q Consensus        81 Dv~s~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~  133 (163)
                      |+||+||+++++++|..||....... ....+........                           .......++.+++
T Consensus       201 DiwSlGv~l~~ll~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d  279 (348)
T d2gfsa1         201 DIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVD  279 (348)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHH
T ss_pred             chhhhhHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHH
Confidence            99999999999999988876433221 1111111100000                           0001234577899


Q ss_pred             HHHhccccCcCCCCCHHHHHH
Q 043958          134 LAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       134 li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      |+.+||..||++|||+.|+++
T Consensus       280 li~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         280 LLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHCcCChhhCcCHHHHhc
Confidence            999999999999999999987

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=6.3e-32  Score=193.15  Aligned_cols=146  Identities=12%  Similarity=0.104  Sum_probs=107.4

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCC------eEECccccccccCCCCCcccccCccccccccCccccccCC
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHV------AKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGD   75 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~------~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~   75 (163)
                      ||+.||+|||+  ..+|+||||||+|||++.++.      ++++|||.+.......     ....+++.|+|||.+.+..
T Consensus       133 qil~al~~lh~--~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~-----~~~~gt~~y~aPE~~~~~~  205 (362)
T d1q8ya_         133 QLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY-----TNSIQTREYRSPEVLLGAP  205 (362)
T ss_dssp             HHHHHHHHHHH--TTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCC-----CSCCSCGGGCCHHHHHTCC
T ss_pred             HHHHHHHHHhh--hcCcccccCChhHeeeeccCcccccceeeEeeccccccccccc-----ccccccccccChhhccccC
Confidence            78999999993  389999999999999977654      8999999987654332     2346899999999999999


Q ss_pred             CCcccceeecchhhHHHhhhccccccccchhhc-----cchh--------------------------------------
Q 043958           76 YNEKCDVFSFAGDRHWLLNRVKKHIECNTFDEI-----VDPV--------------------------------------  112 (163)
Q Consensus        76 ~~~~~Dv~s~g~~~~~l~~~~~~~~~~~~~~~~-----~~~~--------------------------------------  112 (163)
                      ++.++|+||+||++++++++..||.........     ....                                      
T Consensus       206 ~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (362)
T d1q8ya_         206 WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP  285 (362)
T ss_dssp             CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCC
T ss_pred             CCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCc
Confidence            999999999999999999998886532211000     0000                                      


Q ss_pred             hhhhhcccchhhHHHHHHHHHHHHhccccCcCCCCCHHHHHH
Q 043958          113 IREELCIQSSEKDKQVQAFVELAVKCVSESAEDRPTMIDVAK  154 (163)
Q Consensus       113 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~i~~  154 (163)
                      ...............++.+.+|+.+||..||.+|||+.|+++
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         286 LEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             hhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            000000011123456788999999999999999999999987

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.39  E-value=1.1e-13  Score=89.70  Aligned_cols=75  Identities=17%  Similarity=0.148  Sum_probs=51.2

Q ss_pred             hHHHHHHHHhcCCCCCeEeccCCCCCeeeCCCCCeEECccccccccCCCCCcccccCccccccccCccccccCCCCcccc
Q 043958            2 EIANALAYLHVGFPRPIVFKNIKLSSILFDEDHVAKLFDFSLAESIPDGETHIKDAIPIGIMGFVATEYVTTGDYNEKCD   81 (163)
Q Consensus         2 qi~~~l~~lh~~~~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~D   81 (163)
                      |++.+|+|||   ..+++||||||+|||++.++ ++++|||.+............   ...... -.++ ..+.|+.++|
T Consensus       111 ql~~~l~~lH---~~giiHrDiKP~NILv~~~~-~~liDFG~a~~~~~~~~~~~l---~rd~~~-~~~~-f~r~y~~~~d  181 (191)
T d1zara2         111 MILEEVAKFY---HRGIVHGDLSQYNVLVSEEG-IWIIDFPQSVEVGEEGWREIL---ERDVRN-IITY-FSRTYRTEKD  181 (191)
T ss_dssp             HHHHHHHHHH---HTTEECSCCSTTSEEEETTE-EEECCCTTCEETTSTTHHHHH---HHHHHH-HHHH-HHHHHCCCCC
T ss_pred             HHHHHHHHHh---hCCEEEccCChhheeeeCCC-EEEEECCCcccCCCCCcHHHH---HHHHHH-HHHH-HcCCCCCccc
Confidence            7899999999   89999999999999999765 889999998665433221100   000000 0111 1356788899


Q ss_pred             eeec
Q 043958           82 VFSF   85 (163)
Q Consensus        82 v~s~   85 (163)
                      +||+
T Consensus       182 ~~s~  185 (191)
T d1zara2         182 INSA  185 (191)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            9986

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.16  E-value=0.0006  Score=46.17  Aligned_cols=30  Identities=23%  Similarity=0.512  Sum_probs=27.0

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      ..+++|+|+.++|++++.+...-|.||+.+
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~  211 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFA  211 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             ccccccCCcchhhhhcccccceeEeccccc
Confidence            468999999999999998887789999976

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.64  E-value=0.0026  Score=41.52  Aligned_cols=28  Identities=14%  Similarity=0.268  Sum_probs=24.6

Q ss_pred             CeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           17 PIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        17 ~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      .++|+|+.|.||+++.++.+.+.||+.+
T Consensus       184 ~l~HgD~~~~Nil~~~~~~~~lIDwe~a  211 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             EEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             EEEEeeccCcceeecCCceEEEeechhc
Confidence            4799999999999998777779999865

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=95.19  E-value=0.0032  Score=40.92  Aligned_cols=28  Identities=11%  Similarity=0.230  Sum_probs=24.5

Q ss_pred             CeEeccCCCCCeeeCCCCCeEECccccc
Q 043958           17 PIVFKNIKLSSILFDEDHVAKLFDFSLA   44 (163)
Q Consensus        17 ~~~H~dik~~nil~~~~~~~~l~dfg~~   44 (163)
                      .++|+|+.|.||+++.+..+.|+||+.+
T Consensus       176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~  203 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGRFSGFIDCGRL  203 (255)
T ss_dssp             EEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             eEEeCCCCCcceEEeCCceEEEEEchhc
Confidence            4799999999999998777789999865

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.95  E-value=0.014  Score=40.65  Aligned_cols=31  Identities=19%  Similarity=0.295  Sum_probs=25.9

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      ...++|+|+.+.|||++.++ ++|.||..+..
T Consensus       222 ~~~LiHGDl~~gNIlv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         222 AETLIHGDLHTGSIFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             CCEEECSCCCGGGEEECSSC-EEECCCTTCEE
T ss_pred             CcceeccCCcCCceeEcCCc-eEEechhhccc
Confidence            34689999999999998775 89999987743

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=92.60  E-value=0.024  Score=38.31  Aligned_cols=30  Identities=13%  Similarity=0.200  Sum_probs=24.0

Q ss_pred             CCCeEeccCCCCCeeeCCCCCeEECccccccc
Q 043958           15 PRPIVFKNIKLSSILFDEDHVAKLFDFSLAES   46 (163)
Q Consensus        15 ~~~~~H~dik~~nil~~~~~~~~l~dfg~~~~   46 (163)
                      ..+++|+|+.+.|||++.+  ..++||+-+..
T Consensus       191 p~~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         191 TVLRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             CCEECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             CceeecCCCCcccEEEeCC--ceEEechhccc
Confidence            4578999999999999743  45889998743

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=85.42  E-value=0.18  Score=34.74  Aligned_cols=17  Identities=12%  Similarity=0.335  Sum_probs=13.6

Q ss_pred             CeEeccCCCCCeeeCCC
Q 043958           17 PIVFKNIKLSSILFDED   33 (163)
Q Consensus        17 ~~~H~dik~~nil~~~~   33 (163)
                      .++|.|+.+.||++...
T Consensus       219 v~CHnDL~~~NiL~~~~  235 (395)
T d1nw1a_         219 TFCHNDLQEGNILLPKA  235 (395)
T ss_dssp             EEECSCCCGGGEEEEC-
T ss_pred             eEEecCCCcccEeeccc
Confidence            35799999999998553