Query 043962
Match_columns 200
No_of_seqs 266 out of 1620
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 17:24:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043962.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043962hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwl_A Copper transport protei 99.6 4.3E-15 1.5E-19 101.0 8.3 64 2-67 4-67 (68)
2 4a4j_A Pacszia, cation-transpo 99.6 1.9E-14 6.7E-19 96.9 9.5 65 1-65 3-69 (69)
3 3dxs_X Copper-transporting ATP 99.5 2.8E-14 9.7E-19 97.5 8.8 67 1-67 3-72 (74)
4 3fry_A Probable copper-exporti 99.5 7.1E-14 2.4E-18 96.0 8.0 64 2-67 7-70 (73)
5 1cc8_A Protein (metallochapero 99.5 1.9E-13 6.7E-18 93.3 8.6 64 2-66 7-71 (73)
6 2roe_A Heavy metal binding pro 99.5 1.8E-13 6.2E-18 90.9 7.9 65 1-65 1-65 (66)
7 2xmm_A SSR2857 protein, ATX1; 99.5 1.6E-13 5.5E-18 89.3 7.1 62 1-62 2-63 (64)
8 2crl_A Copper chaperone for su 99.4 1.6E-12 5.6E-17 95.1 8.6 66 2-68 21-86 (98)
9 2xmw_A PACS-N, cation-transpor 99.4 2.9E-12 9.8E-17 84.9 9.0 64 2-65 5-70 (71)
10 1cpz_A Protein (COPZ); copper 99.4 3.7E-12 1.3E-16 83.7 9.0 63 2-64 2-67 (68)
11 2l3m_A Copper-ION-binding prot 99.4 3.1E-12 1.1E-16 85.2 8.6 61 2-62 7-70 (71)
12 2kt2_A Mercuric reductase; nme 99.4 2.8E-12 9.5E-17 85.1 8.3 64 2-65 2-67 (69)
13 2k2p_A Uncharacterized protein 99.4 8.3E-13 2.8E-17 94.2 6.1 61 2-62 24-84 (85)
14 1aw0_A Menkes copper-transport 99.4 2.5E-12 8.4E-17 85.7 8.0 64 2-65 5-71 (72)
15 1osd_A MERP, hypothetical prot 99.4 3.8E-12 1.3E-16 84.8 8.5 63 2-64 5-70 (72)
16 3cjk_B Copper-transporting ATP 99.3 4.8E-12 1.6E-16 85.5 9.1 65 2-66 4-71 (75)
17 1fvq_A Copper-transporting ATP 99.3 3.8E-12 1.3E-16 84.7 8.0 65 2-66 4-70 (72)
18 1mwy_A ZNTA; open-faced beta-s 99.3 7.2E-12 2.5E-16 84.5 9.4 64 2-65 5-69 (73)
19 2g9o_A Copper-transporting ATP 99.3 4E-12 1.4E-16 90.8 8.1 67 2-68 5-77 (90)
20 1kvi_A Copper-transporting ATP 99.3 5.5E-12 1.9E-16 86.2 8.2 64 2-65 10-76 (79)
21 2qif_A Copper chaperone COPZ; 99.3 8.4E-12 2.9E-16 81.3 8.6 61 2-62 4-67 (69)
22 1q8l_A Copper-transporting ATP 99.3 5.2E-12 1.8E-16 88.2 8.0 66 2-67 11-79 (84)
23 1yg0_A COP associated protein; 99.3 5.1E-12 1.8E-16 82.6 6.8 61 2-62 3-65 (66)
24 2kyz_A Heavy metal binding pro 99.3 2.1E-12 7.3E-17 86.1 5.0 61 2-64 3-63 (67)
25 1yjr_A Copper-transporting ATP 99.3 1.1E-11 3.9E-16 83.0 8.5 65 1-65 5-72 (75)
26 1opz_A Potential copper-transp 99.3 1.3E-11 4.5E-16 82.5 8.7 64 2-65 8-74 (76)
27 1y3j_A Copper-transporting ATP 99.3 5.5E-12 1.9E-16 85.9 6.5 65 2-66 5-72 (77)
28 2ldi_A Zinc-transporting ATPas 99.3 1E-11 3.4E-16 81.7 7.5 62 2-63 5-69 (71)
29 1p6t_A Potential copper-transp 99.3 1.3E-11 4.5E-16 94.3 8.3 67 2-68 76-145 (151)
30 1jww_A Potential copper-transp 99.3 1.9E-11 6.4E-16 83.1 8.1 66 2-67 5-73 (80)
31 2ew9_A Copper-transporting ATP 99.2 2E-11 7E-16 92.6 8.5 63 2-64 82-147 (149)
32 2ew9_A Copper-transporting ATP 99.2 4.1E-11 1.4E-15 91.0 9.1 101 2-136 6-109 (149)
33 2ofg_X Zinc-transporting ATPas 99.2 6.1E-11 2.1E-15 88.1 8.6 63 2-64 10-75 (111)
34 2kkh_A Putative heavy metal tr 99.2 1.6E-10 5.4E-15 82.6 9.1 66 2-67 18-86 (95)
35 2rop_A Copper-transporting ATP 99.1 1.2E-10 4.2E-15 94.2 9.0 66 2-67 124-192 (202)
36 1qup_A Superoxide dismutase 1 99.1 1.5E-10 5E-15 97.2 8.9 66 2-68 8-73 (222)
37 2aj0_A Probable cadmium-transp 99.1 1.2E-10 4.1E-15 78.1 5.8 58 2-63 5-62 (71)
38 3j09_A COPA, copper-exporting 99.1 3.7E-11 1.3E-15 115.6 4.0 98 1-116 3-103 (723)
39 1jk9_B CCS, copper chaperone f 99.0 4.3E-10 1.5E-14 95.9 8.2 66 2-68 9-74 (249)
40 1p6t_A Potential copper-transp 98.8 9.7E-09 3.3E-13 78.1 8.3 61 2-62 8-71 (151)
41 2rop_A Copper-transporting ATP 98.8 1E-08 3.4E-13 82.8 7.4 62 2-63 22-89 (202)
42 3bpd_A Uncharacterized protein 87.3 1 3.4E-05 33.0 5.1 50 17-66 23-80 (100)
43 2x3d_A SSO6206; unknown functi 86.7 1.6 5.6E-05 31.7 5.9 50 17-66 22-79 (96)
44 2raq_A Conserved protein MTH88 83.8 3.2 0.00011 30.2 6.3 50 17-66 23-80 (97)
45 3lvj_C Sulfurtransferase TUSA; 78.4 11 0.00036 25.8 7.4 55 2-65 11-67 (82)
46 1jdq_A TM006 protein, hypothet 73.4 13 0.00044 26.5 6.9 56 2-66 27-84 (98)
47 2jsx_A Protein NAPD; TAT, proo 71.3 12 0.00039 26.8 6.2 44 14-57 18-62 (95)
48 3hz7_A Uncharacterized protein 66.0 9.3 0.00032 26.6 4.6 54 2-65 2-59 (87)
49 3lno_A Putative uncharacterize 61.8 9.4 0.00032 27.5 4.1 24 15-38 64-88 (108)
50 3cq1_A Putative uncharacterize 60.9 8.8 0.0003 27.2 3.8 34 3-37 44-83 (103)
51 1owx_A Lupus LA protein, SS-B, 60.2 42 0.0015 24.8 7.7 57 2-58 19-76 (121)
52 1je3_A EC005, hypothetical 8.6 57.7 15 0.0005 26.2 4.5 54 3-65 29-84 (97)
53 2nyt_A Probable C->U-editing e 57.1 21 0.00073 28.6 5.9 61 2-65 85-145 (190)
54 4gwb_A Peptide methionine sulf 51.5 29 0.001 27.4 5.7 45 12-56 9-71 (168)
55 1uwd_A Hypothetical protein TM 49.9 13 0.00045 26.2 3.2 23 16-38 63-85 (103)
56 1fvg_A Peptide methionine sulf 46.1 35 0.0012 27.6 5.5 45 12-56 50-116 (199)
57 1pav_A Hypothetical protein TA 44.9 16 0.00055 24.4 2.9 53 3-64 8-62 (78)
58 3bqh_A PILB, peptide methionin 40.9 46 0.0016 26.8 5.4 45 12-56 9-75 (193)
59 1ff3_A Peptide methionine sulf 40.2 42 0.0014 27.4 5.1 46 12-57 49-116 (211)
60 2j89_A Methionine sulfoxide re 39.8 48 0.0016 28.0 5.5 45 12-56 101-167 (261)
61 1xhj_A Nitrogen fixation prote 39.7 30 0.001 24.3 3.7 30 2-32 40-77 (88)
62 2z51_A NIFU-like protein 2, ch 39.3 33 0.0011 26.5 4.2 31 2-33 37-75 (154)
63 2w7v_A General secretion pathw 38.9 49 0.0017 23.6 4.8 47 17-64 16-68 (95)
64 1nwa_A Peptide methionine sulf 37.7 53 0.0018 26.7 5.3 45 12-56 32-94 (203)
65 1th5_A NIFU1; iron-sulfur clus 34.7 18 0.00062 24.6 1.8 30 2-32 38-71 (74)
66 3u99_A Diheme cytochrome C; cy 32.0 7.9 0.00027 30.1 -0.5 7 118-124 19-25 (148)
67 3e0m_A Peptide methionine sulf 31.5 73 0.0025 27.6 5.5 45 12-56 9-73 (313)
68 3rfu_A Copper efflux ATPase; a 30.4 4.5 0.00015 38.9 -2.7 60 42-117 35-101 (736)
69 1veh_A NIFU-like protein hirip 28.0 29 0.001 24.6 2.0 30 2-32 47-84 (92)
70 2fi0_A Conserved domain protei 26.7 45 0.0015 22.6 2.7 19 45-63 60-78 (81)
71 2zxy_A Cytochrome C552, cytoch 23.1 21 0.00071 23.1 0.4 8 117-124 11-18 (87)
72 3cu4_A Cytochrome C family pro 22.7 22 0.00076 23.2 0.5 7 117-123 15-21 (85)
73 3b47_A GSU0582, methyl-accepti 22.3 1.3E+02 0.0043 22.0 4.7 24 17-40 36-59 (134)
74 2jmk_A Hypothetical protein TA 21.7 1.6E+02 0.0056 21.1 4.9 37 28-64 66-109 (111)
75 2exv_A Cytochrome C-551; alpha 21.3 24 0.00081 22.7 0.4 8 117-124 11-18 (82)
76 1ayg_A Cytochrome C-552; elect 21.2 25 0.00087 22.7 0.5 10 115-124 7-16 (80)
77 2d0s_A Cytochrome C, cytochrom 21.2 24 0.00082 22.7 0.4 9 116-124 8-16 (79)
78 2ce0_A Cytochrome C6; chloropl 20.7 26 0.00088 23.7 0.5 7 117-123 15-21 (105)
79 1kx2_A Mono-heme C-type cytoch 20.5 27 0.00091 22.9 0.5 8 117-124 13-20 (81)
80 1c53_A Cytochrome C553; electr 20.5 20 0.00069 23.2 -0.1 7 118-124 10-16 (79)
No 1
>3iwl_A Copper transport protein ATOX1; beta-alpha-beta-BETA-alpha-beta, cisplatin, platinum, chaperone, ION transport, metal-binding, metal transport; HET: TCE; 1.60A {Homo sapiens} SCOP: d.58.17.1 PDB: 1fe4_A* 1fee_A* 1tl4_A 1tl5_A 2k1r_B 1fe0_A* 3iwx_A 3cjk_A
Probab=99.59 E-value=4.3e-15 Score=101.02 Aligned_cols=64 Identities=22% Similarity=0.322 Sum_probs=60.8
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEccc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELLAY 67 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~~~ 67 (200)
.+|+| ||+|++|+.+|+++|++++|| ++++|+.+++++|.+.++.++|+++|+++||.+.++..
T Consensus 4 ~~~~v-gm~C~~C~~~i~~~l~~~~gV-~v~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~~ 67 (68)
T 3iwl_A 4 HEFSV-DMTCGGCAEAVSRVLNKLGGV-KYDIDLPNKKVCIESEHSMDTLLATLKKTGKTVSYLGL 67 (68)
T ss_dssp EEEEE-CCCSHHHHHHHHHHHHHHCSE-EEEEETTTTEEEEEESSCHHHHHHHHHTTCSCEEEEEC
T ss_pred EEEEE-CcCcHHHHHHHHHHHHcCCCe-EEEEEcCCCEEEEEecCCHHHHHHHHHHcCCceEecCC
Confidence 67999 999999999999999999999 99999999999999889999999999999999988754
No 2
>4a4j_A Pacszia, cation-transporting ATPase PACS; hydrolase, copper homeostasis, zinc homeostasis, ATX1, metal-transporting atpases; 1.25A {Synechocystis} PDB: 4a48_A 2gcf_A 2xmw_A
Probab=99.56 E-value=1.9e-14 Score=96.87 Aligned_cols=65 Identities=25% Similarity=0.480 Sum_probs=60.6
Q ss_pred CEEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEe--ccCCHHHHHHHHHhcCCcEEEc
Q 043962 1 ICVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVT--GLLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 1 ~v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~--~~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
+++|.|+||+|.+|+.+|+++|++++||.+++||+.+++++|. ..++.++|.++|+++||.++++
T Consensus 3 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (69)
T 4a4j_A 3 TINLQLEGMDCTSCASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 69 (69)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHTTCEEEEC
T ss_pred EEEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHcCCceEeC
Confidence 3689999999999999999999999999999999999999998 5689999999999999998763
No 3
>3dxs_X Copper-transporting ATPase RAN1; CXXC motif, ferredoxin-like fold, ATP- binding, ethylene signaling pathway, hydrolase, ION transport; 1.70A {Arabidopsis thaliana} SCOP: d.58.17.0
Probab=99.54 E-value=2.8e-14 Score=97.48 Aligned_cols=67 Identities=25% Similarity=0.316 Sum_probs=61.3
Q ss_pred CEEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEccc
Q 043962 1 ICVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLAY 67 (200)
Q Consensus 1 ~v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~~ 67 (200)
+++|.|+||+|++|+.+|+++|++++||.+++||+.+++++|.. .++.++|.++|+++||.++++..
T Consensus 3 ~~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 72 (74)
T 3dxs_X 3 KIQVGVTGMTCAACSNSVEAALMNVNGVFKASVALLQNRADVVFDPNLVKEEDIKEEIEDAGFEAEILAE 72 (74)
T ss_dssp EEEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEEEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHhcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceEEccC
Confidence 36799999999999999999999999999999999999999963 36899999999999999988654
No 4
>3fry_A Probable copper-exporting P-type ATPase A; transport protein, metal binding domain, domain SWAP, ATP-BI cell membrane, copper transport; HET: CIT; 2.00A {Archaeoglobus fulgidus}
Probab=99.49 E-value=7.1e-14 Score=96.03 Aligned_cols=64 Identities=22% Similarity=0.337 Sum_probs=60.4
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEccc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELLAY 67 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~~~ 67 (200)
++|+|+||+|.+|+.+|+++|++ +||..++||+.+++++|..+ +.++|.++|+++||.+++...
T Consensus 7 ~~~~v~gm~C~~C~~~ie~~l~~-~gv~~~~v~~~~~~~~v~~~-~~~~i~~~i~~~Gy~~~~~~~ 70 (73)
T 3fry_A 7 IVLELSGLSCHHCVARVKKALEE-AGAKVEKVDLNEAVVAGNKE-DVDKYIKAVEAAGYQAKLRSS 70 (73)
T ss_dssp EEEEEESSBCGGGHHHHHHHHHH-TTCEEEEECSSEEEEEEEGG-GHHHHHHHHHHTTCEEEECCS
T ss_pred EEEEECCCCCHHHHHHHHHHhcc-CCcEEEEEEccCCEEEEEEC-CHHHHHHHHHHcCCceEecCc
Confidence 67999999999999999999999 99999999999999999987 999999999999999988654
No 5
>1cc8_A Protein (metallochaperone ATX1); copper transport, mercury coordination, metal transport; 1.02A {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1cc7_A 1fd8_A 1fes_A 2ggp_A 3k7r_A
Probab=99.47 E-value=1.9e-13 Score=93.35 Aligned_cols=64 Identities=31% Similarity=0.393 Sum_probs=60.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccC-CceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEcc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQ-GVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~-GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
++|+|+ |+|++|+.+|+++|++++ ||.+++||+.+++++|.+.++.++|.++|+++||.+..+.
T Consensus 7 ~~~~v~-m~C~~C~~~ie~~l~~~~~GV~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (73)
T 1cc8_A 7 YQFNVV-MTCSGCSGAVNKVLTKLEPDVSKIDISLEKQLVDVYTTLPYDFILEKIKKTGKEVRSGK 71 (73)
T ss_dssp EEEEEC-CCSHHHHHHHHHHHHTTTTSEEEEEEETTTTEEEEEESSCHHHHHHHHHTTSSCEEEEE
T ss_pred EEEEEe-eECHHHHHHHHHHHHhCCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCCceeee
Confidence 579999 999999999999999999 9999999999999999988899999999999999987753
No 6
>2roe_A Heavy metal binding protein; NMR {Thermus thermophilus} PDB: 2rog_A
Probab=99.46 E-value=1.8e-13 Score=90.94 Aligned_cols=65 Identities=34% Similarity=0.582 Sum_probs=59.9
Q ss_pred CEEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEc
Q 043962 1 ICVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 1 ~v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
+.+|+|+||+|.+|+.+|+++|++++||.++++|+.+++++|.+.++.++|.++|+++||.+..+
T Consensus 1 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~Gy~~~~~ 65 (66)
T 2roe_A 1 MLKLKVEGMTCNHCVMAVTKALKKVPGVEKVEVSLEKGEALVEGTADPKALVQAVEEEGYKAEVL 65 (66)
T ss_dssp CBCEEEECCCSHHHHHHHHHHHHTSTTCCCEEECSSSCBEEECSCCCHHHHHHHHHTTTCEEEEC
T ss_pred CEEEEECCeEcHHHHHHHHHHHHcCCCeEEEEEEeCCCEEEECCCCCHHHHHHHHHHcCCCcEec
Confidence 35789999999999999999999999999999999999999976688999999999999988654
No 7
>2xmm_A SSR2857 protein, ATX1; metal transport, copper homeostasis, chaperone, P-type atpas; 1.65A {Synechocystis SP} PDB: 2xmv_A 1sb6_A 2xmj_A 2xmk_A 2xmt_A 2xmu_A
Probab=99.46 E-value=1.6e-13 Score=89.35 Aligned_cols=62 Identities=23% Similarity=0.342 Sum_probs=58.4
Q ss_pred CEEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcE
Q 043962 1 ICVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEA 62 (200)
Q Consensus 1 ~v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a 62 (200)
+++|+|+||+|.+|+.+|+++|++++||.++++|+.+++++|....+.++|.++|+++||.+
T Consensus 2 ~~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~i~~~i~~~G~~~ 63 (64)
T 2xmm_A 2 TIQLTVPTIACEACAEAVTKAVQNEDAQATVQVDLTSKKVTITSALGEEQLRTAIASAGYEV 63 (64)
T ss_dssp CEEEECTTCCSHHHHHHHHHHHHHHCTTCEEEECTTTCEEEEECSSCHHHHHHHHHHTTCCC
T ss_pred eEEEEECCcCcHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 46799999999999999999999999999999999999999998788999999999999975
No 8
>2crl_A Copper chaperone for superoxide dismutase; SOD1, familial ALS, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=1.6e-12 Score=95.11 Aligned_cols=66 Identities=23% Similarity=0.395 Sum_probs=61.8
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEcccC
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELLAYE 68 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~~~~ 68 (200)
++|+|+ |+|.+|+.+|+++|++++||.+++||+.+++++|...++.++|+++|+++||.+.++...
T Consensus 21 ~~l~V~-m~C~~C~~~Ie~aL~~l~GV~~v~vdl~~~~~~V~~~~~~~~i~~~i~~~Gy~~~~~~~~ 86 (98)
T 2crl_A 21 LEFAVQ-MTCQSCVDAVRKSLQGVAGVQDVEVHLEDQMVLVHTTLPSQEVQALLEGTGRQAVLKGMG 86 (98)
T ss_dssp EEEEEC-CCSHHHHHHHHHTTTTCTTCCEEEEETTTTEEEEEESSCHHHHHHHHHTTTSCEEEEESC
T ss_pred EEEEEe-eECHHHHHHHHHHHHcCCCceEEEEECCCCEEEEEEeCCHHHHHHHHHHhCCceEEccCC
Confidence 579999 999999999999999999999999999999999998889999999999999999886554
No 9
>2xmw_A PACS-N, cation-transporting ATPase PACS; hydrolase, Cu(I)-binding, trafficking; 1.80A {Synechocystis SP} PDB: 2gcf_A
Probab=99.37 E-value=2.9e-12 Score=84.95 Aligned_cols=64 Identities=25% Similarity=0.453 Sum_probs=57.5
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEecc--CCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGL--LDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~--v~~~~I~~aI~k~Gy~a~~~ 65 (200)
++|+|+||+|.+|+.+|+++|.+++||.++++|+.+++++|..+ ++.++|.++|+++||.+...
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~ 70 (71)
T 2xmw_A 5 INLQLEGMRCAACASSIERAIAKVPGVQSCQVNFALEQAVVSYHGETTPQILTDAVERAGYHARVL 70 (71)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEC---CHHHHHHHHHHHTCEEEEE
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCHHHHHHHHHHcCCCceeC
Confidence 57899999999999999999999999999999999999999743 67889999999999987653
No 10
>1cpz_A Protein (COPZ); copper chaperone, metal transport, gene regulation; NMR {Enterococcus hirae} SCOP: d.58.17.1
Probab=99.36 E-value=3.7e-12 Score=83.70 Aligned_cols=63 Identities=22% Similarity=0.411 Sum_probs=57.9
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~ 64 (200)
++|+|+||+|.+|+.+|+++|.+++||.++++|+.+++++|.. .++.++|.++|+++||.+++
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 67 (68)
T 1cpz_A 2 QEFSVKGMSCNHCVARIEEAVGRISGVKKVKVQLKKEKAVVKFDEANVQATEICQAINELGYQAEV 67 (68)
T ss_dssp CEEEESCCCSSSHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHTTSSCEEE
T ss_pred EEEEECCeeCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCccc
Confidence 4789999999999999999999999999999999999999974 36789999999999998765
No 11
>2l3m_A Copper-ION-binding protein; structural genomics, center for structural genomics of infec diseases, csgid, metal binding protein; NMR {Bacillus anthracis}
Probab=99.36 E-value=3.1e-12 Score=85.15 Aligned_cols=61 Identities=25% Similarity=0.410 Sum_probs=56.4
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEA 62 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a 62 (200)
++|+|+||+|.+|+.+|+++|.+++||..+.+|+.+++++|.. .++.++|.++|+++||.+
T Consensus 7 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 70 (71)
T 2l3m_A 7 LTLQVEGMSCGHCVNAIESSVKELNGVEQVKVQLAEGTVEVTIDSSVVTLKDIVAVIEDQGYDV 70 (71)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTSCHHHHHHHHHHTTCEE
T ss_pred EEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5799999999999999999999999999999999999999963 468899999999999975
No 12
>2kt2_A Mercuric reductase; nmera, MERA, HMA domain, mercuric resist metal-binding, oxidoreductase; NMR {Pseudomonas aeruginosa} PDB: 2kt3_A
Probab=99.36 E-value=2.8e-12 Score=85.12 Aligned_cols=64 Identities=23% Similarity=0.405 Sum_probs=58.0
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec--cCCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG--LLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~--~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
.+|.|+||+|.+|+.+|+++|++++||.++++|+.+++++|.. ..+.++|.++|+++||.+.+.
T Consensus 2 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~Gy~~~~~ 67 (69)
T 2kt2_A 2 THLKITGMTCDSCAAHVKEALEKVPGVQSALVSYPKGTAQLAIVPGTSPDALTAAVAGLGYKATLA 67 (69)
T ss_dssp CCEEEESSCSTHHHHHHHHHHHHSTTEEEEEEETTTTEEEEEECTTSCHHHHHHHHHTTTSEEECC
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCHHHHHHHHHHCCCceEeC
Confidence 4689999999999999999999999999999999999999963 367899999999999987653
No 13
>2k2p_A Uncharacterized protein ATU1203; putative metal-binding domain ATU1203, ontario centre for ST proteomics, structural genomics; NMR {Agrobacterium tumefaciens str}
Probab=99.36 E-value=8.3e-13 Score=94.20 Aligned_cols=61 Identities=25% Similarity=0.346 Sum_probs=58.0
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEA 62 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a 62 (200)
++|+|+||+|++|+.+|+++|++++||.+++||+.+++++|...++.++|.++|+++||.+
T Consensus 24 ~~l~V~Gm~C~~C~~~Ie~aL~~~~GV~~v~v~l~~~~~~V~~~~~~~~i~~~i~~~Gy~~ 84 (85)
T 2k2p_A 24 LSFHVEDMTCGHCAGVIKGAIEKTVPGAAVHADPASRTVVVGGVSDAAHIAEIITAAGYTP 84 (85)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHHHSTTCEEEEETTTTEEEEESCCCHHHHHHHHHHTTCCC
T ss_pred EEEEECCCCCHHHHHHHHHHHhcCCCeeEEEEECCCCEEEEEecCCHHHHHHHHHHcCCCC
Confidence 5799999999999999999999999999999999999999998889999999999999974
No 14
>1aw0_A Menkes copper-transporting ATPase; copper-binding domain, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 2aw0_A
Probab=99.36 E-value=2.5e-12 Score=85.69 Aligned_cols=64 Identities=20% Similarity=0.353 Sum_probs=58.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEecc---CCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGL---LDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~---v~~~~I~~aI~k~Gy~a~~~ 65 (200)
++|+|+||+|.+|+.+|+++|++++||.++.+|+.+++++|... ++.++|.++|+++||.+.+.
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 71 (72)
T 1aw0_A 5 TVINIDGMTCNSCVQSIEGVISKKPGVKSIRVSLANSNGTVEYDPLLTSPETLRGAIEDMGFDATLS 71 (72)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTSTTCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEEC
T ss_pred EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCcCCHHHHHHHHHHCCCCcEeC
Confidence 57899999999999999999999999999999999999999743 67899999999999987653
No 15
>1osd_A MERP, hypothetical protein MERP; mercury resistance, metal binding protein, perisplasm, structural genomics; 2.00A {Cupriavidus metallidurans} SCOP: d.58.17.1 PDB: 1afi_A 1afj_A 2hqi_A
Probab=99.35 E-value=3.8e-12 Score=84.75 Aligned_cols=63 Identities=22% Similarity=0.368 Sum_probs=57.8
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~ 64 (200)
++|+|+||+|.+|+.+|+++|.+++||.++++|+.+++++|.. .++.++|.++|+++||.+.+
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~ 70 (72)
T 1osd_A 5 VTLSVPGMTCSACPITVKKAISKVEGVSKVDVTFETRQAVVTFDDAKTSVQKLTKATADAGYPSSV 70 (72)
T ss_dssp EEEECTTCCSTTHHHHHHHHHHTSTTEEEEEEETTTTEEEEEEETTTCCHHHHHHHHHHTTCCCEE
T ss_pred EEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHhcCCCeEe
Confidence 5789999999999999999999999999999999999999963 36789999999999998765
No 16
>3cjk_B Copper-transporting ATPase 1; HAH1, ATP7B, menkes disease, metal homeostasis, chaperone, ION transport, metal- binding, alternative splicing; 1.80A {Homo sapiens} PDB: 2k1r_A
Probab=99.35 E-value=4.8e-12 Score=85.46 Aligned_cols=65 Identities=23% Similarity=0.435 Sum_probs=59.1
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEcc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
++|.|+||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++.++|.++|+++||.+.+..
T Consensus 4 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 71 (75)
T 3cjk_B 4 VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIHN 71 (75)
T ss_dssp EEEEECCCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEeec
Confidence 5799999999999999999999999999999999999999963 3678999999999999987643
No 17
>1fvq_A Copper-transporting ATPase; APO-CCC2A, hydrolase; NMR {Saccharomyces cerevisiae} SCOP: d.58.17.1 PDB: 1fvs_A 2ggp_B
Probab=99.34 E-value=3.8e-12 Score=84.74 Aligned_cols=65 Identities=26% Similarity=0.384 Sum_probs=59.3
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec--cCCHHHHHHHHHhcCCcEEEcc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG--LLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~--~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
++|+|+||+|.+|+.+|+++|.+++||.++++|+.+++++|.. .++.++|.++|+++||.+.++.
T Consensus 4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~~~~~ 70 (72)
T 1fvq_A 4 VILAVHGMTCSACTNTINTQLRALKGVTKCDISLVTNECQVTYDNEVTADSIKEIIEDCGFDCEILR 70 (72)
T ss_dssp EEEEECSCCSHHHHHHHHHHHHTSSSEEEECCBTTTTEEEEEECTTSCHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEECCeecHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCHHHHHHHHHHCCCceEEcc
Confidence 5789999999999999999999999999999999999999974 4678999999999999987753
No 18
>1mwy_A ZNTA; open-faced beta-sandwich fold, beta-alpha-beta-BETA-alpha- beta, hydrolase; NMR {Escherichia coli} SCOP: d.58.17.1 PDB: 1mwz_A
Probab=99.34 E-value=7.2e-12 Score=84.47 Aligned_cols=64 Identities=19% Similarity=0.208 Sum_probs=57.4
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEecc-CCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGL-LDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~-v~~~~I~~aI~k~Gy~a~~~ 65 (200)
++|+|+||+|.+|+.+|+++|++++||.++.+|+.+++++|..+ ...++|.++|+++||.+...
T Consensus 5 ~~~~v~gm~C~~C~~~ie~~l~~~~gV~~~~v~~~~~~~~v~~~~~~~~~i~~~i~~~Gy~~~~~ 69 (73)
T 1mwy_A 5 YSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVESALQKAGYSLRDE 69 (73)
T ss_dssp EEEEEESCCSTTHHHHHHHHHHTSSSEEEEEEETTTTEEEEEESSCCHHHHHHHHHHHTCEEEEC
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCHHHHHHHHHHcCCccccc
Confidence 57999999999999999999999999999999999999999743 23678999999999988653
No 19
>2g9o_A Copper-transporting ATPase 1; menkes disease, solution structure, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens} PDB: 2ga7_A
Probab=99.33 E-value=4e-12 Score=90.81 Aligned_cols=67 Identities=18% Similarity=0.262 Sum_probs=60.3
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhc---CCcEEEcccC
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKL---GVEAELLAYE 68 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~---Gy~a~~~~~~ 68 (200)
++|+|+||+|++|+.+|+++|++++||.+++||+.+++++|.. .++.++|.++|+++ ||.+.++.+.
T Consensus 5 ~~l~v~Gm~C~~C~~~Ie~~L~~~~GV~~v~v~l~~~~~~V~~~~~~~~~~~i~~~i~~~g~Ggy~~~~~~~~ 77 (90)
T 2g9o_A 5 ATFIIDGMHCKSCVSNIESTLSALQYVSSIVVSLENRSAIVVYNASSVTPESLRKAIEAVSPGLYRVSITSEV 77 (90)
T ss_dssp EEEEEESCCHHHHHHHHHHHHTTCTTEEEEEEETTTTEEEEEECCSSCCTHHHHHHHHTTSTTTCEEECCCCC
T ss_pred EEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHhccCCCeEEEEeCCC
Confidence 5799999999999999999999999999999999999999973 36788999999999 5998876554
No 20
>1kvi_A Copper-transporting ATPase 1; menkes, Cu-protein, hydrolase; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1kvj_A
Probab=99.32 E-value=5.5e-12 Score=86.16 Aligned_cols=64 Identities=23% Similarity=0.443 Sum_probs=58.6
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
++|+|.||+|.+|+.+|+++|++++||.++++|+.+++++|.. .++.++|.++|+++||.+.+.
T Consensus 10 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~ 76 (79)
T 1kvi_A 10 VTISVEGMTCNSCVWTIEQQIGKVNGVHHIKVSLEEKNATIIYDPKLQTPKTLQEAIDDMGFDAVIH 76 (79)
T ss_dssp EEEEECCCCSTTTHHHHHHHHHHSSSCCCEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHCCCEEEC
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHCCCceEec
Confidence 5799999999999999999999999999999999999999963 367899999999999998764
No 21
>2qif_A Copper chaperone COPZ; tetranuclear Cu(I) cluster; 1.50A {Bacillus subtilis} SCOP: d.58.17.1 PDB: 3i9z_A 1k0v_A 1p8g_A
Probab=99.32 E-value=8.4e-12 Score=81.25 Aligned_cols=61 Identities=25% Similarity=0.394 Sum_probs=56.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEA 62 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a 62 (200)
.+|+|+||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++.++|.++|+++||.+
T Consensus 4 ~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 67 (69)
T 2qif_A 4 KTLQVEGMSCQHCVKAVETSVGELDGVSAVHVNLEAGKVDVSFDADKVSVKDIADAIEDQGYDV 67 (69)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHTTCEE
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCc
Confidence 5799999999999999999999999999999999999999963 467889999999999975
No 22
>1q8l_A Copper-transporting ATPase 1; metal binding protein; NMR {Homo sapiens} SCOP: d.58.17.1 PDB: 1s6o_A 1s6u_A
Probab=99.32 E-value=5.2e-12 Score=88.22 Aligned_cols=66 Identities=26% Similarity=0.373 Sum_probs=59.8
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEccc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLAY 67 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~~ 67 (200)
++|+|+||+|.+|+.+|+++|.+++||.++++|+.+++++|.. .++.++|.++|+++||.+.+...
T Consensus 11 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 79 (84)
T 1q8l_A 11 LKMKVEGMTCHSCTSTIEGKIGKLQGVQRIKVSLDNQEATIVYQPHLISVEEMKKQIEAMGFPAFVKKQ 79 (84)
T ss_dssp EEEEECCTTTCSSCHHHHHHHHTCTTEEEEEECSTTTEEEEEECTTTCCHHHHHHHHHHTTCCEECSCC
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEecCC
Confidence 5799999999999999999999999999999999999999974 36789999999999999876543
No 23
>1yg0_A COP associated protein; open-faced beta-sandwich, missing C-terminal beta-sheet, Met transport; NMR {Helicobacter pylori}
Probab=99.30 E-value=5.1e-12 Score=82.55 Aligned_cols=61 Identities=25% Similarity=0.353 Sum_probs=55.7
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec--cCCHHHHHHHHHhcCCcE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG--LLDPAIIMQTIGKLGVEA 62 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~--~v~~~~I~~aI~k~Gy~a 62 (200)
.+|.|+||+|.+|+.+|+++|++++||.++++|+.+++++|.. ..+.++|.++|+++||.+
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~i~~~i~~~G~~~ 65 (66)
T 1yg0_A 3 ATFQVPSITCNHCVDKIEKFVGEIEGVSFIDVSVEKKSVVVEFDAPATQDLIKEALLDAGQEV 65 (66)
T ss_dssp EEECCTTCSCSHHHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTCCHHHHHHHHHHHTCCC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEECCCCCHHHHHHHHHHcCCCc
Confidence 5789999999999999999999999999999999999999973 257899999999999964
No 24
>2kyz_A Heavy metal binding protein; structural genomics, PSI-biology, protein structure initiative, joint for structural genomics, JCSG; NMR {Thermotoga maritima}
Probab=99.30 E-value=2.1e-12 Score=86.07 Aligned_cols=61 Identities=23% Similarity=0.366 Sum_probs=55.9
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~ 64 (200)
.+|.|+||+|++|+.+|+++|+++ ||.++++|+.+++++|..+.+ ++|.++|+++||.+..
T Consensus 3 ~~~~v~gm~C~~C~~~i~~~l~~~-gv~~~~v~~~~~~~~v~~~~~-~~i~~~i~~~Gy~~~~ 63 (67)
T 2kyz_A 3 YVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETENL-DSVLKKLEEIDYPVES 63 (67)
T ss_dssp EEEECGGGGSHHHHHHHHHHHHHH-TCSEEEEETTTTEEEEECSCH-HHHHHHHHTTTCCCCB
T ss_pred EEEEECCcCcHHHHHHHHHHHHHc-CCeEEEEECCCCEEEEEECCH-HHHHHHHHHcCCceee
Confidence 578999999999999999999999 999999999999999986655 8899999999998654
No 25
>1yjr_A Copper-transporting ATPase 1; metallochaperone, protein-protein interaction, copper(I), metal homeostasis, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1yjt_A 1yju_A 1yjv_A
Probab=99.30 E-value=1.1e-11 Score=83.03 Aligned_cols=65 Identities=25% Similarity=0.359 Sum_probs=58.2
Q ss_pred CEEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEecc---CCHHHHHHHHHhcCCcEEEc
Q 043962 1 ICVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGL---LDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 1 ~v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~---v~~~~I~~aI~k~Gy~a~~~ 65 (200)
+++|+|+||+|.+|+.+|+++|.+++||.++++|+.+++++|... ++.++|.++|+++||.+...
T Consensus 5 ~~~~~v~gm~C~~c~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 72 (75)
T 1yjr_A 5 VLELVVRGMTCASCVHKIESSLTKHRGILYCSVALATNKAHIKYDPEIIGPRDIIHTIESLGFEPSLV 72 (75)
T ss_dssp CEEEEEETCCTTTHHHHHHHHHTTSTTEEEEEEETTTTEEEEEECTTTTHHHHHHHHHHHHHCEEEES
T ss_pred EEEEEECCcccHHHHHHHHHHHHcCCCEEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCceee
Confidence 367999999999999999999999999999999999999999743 56788999999999987653
No 26
>1opz_A Potential copper-transporting ATPase; mutation, folding, abbab fold, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 1oq3_A 1oq6_A
Probab=99.29 E-value=1.3e-11 Score=82.53 Aligned_cols=64 Identities=25% Similarity=0.374 Sum_probs=58.0
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
.+|+|+||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++.++|.++|+++||.+..+
T Consensus 8 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~ 74 (76)
T 1opz_A 8 IAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHVVIE 74 (76)
T ss_dssp EEEEEESCCSTTHHHHHHHHHHTSTTEEEEEEEGGGTEEEEEECTTTCCHHHHHHHHHHHTCEEECC
T ss_pred EEEEECCcccHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHCCCceecC
Confidence 5799999999999999999999999999999999999999963 467899999999999987653
No 27
>1y3j_A Copper-transporting ATPase 1; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta structure, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 1y3k_A
Probab=99.28 E-value=5.5e-12 Score=85.90 Aligned_cols=65 Identities=23% Similarity=0.501 Sum_probs=59.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEcc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
++|+|+||+|++|+.+|+++|.+++||.++++|+.+++++|.. .++.++|.++|+++||.+....
T Consensus 5 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~ 72 (77)
T 1y3j_A 5 CYIQVTGMTCASCVANIERNLRREEGIYSILVALMAGKAEVRYNPAVIQPPMIAEFIRELGFGATVIE 72 (77)
T ss_dssp EEEEESCGGGCSHHHHHHHHHTTSSSEEECCCBTTTTBEEEEECTTTSCHHHHHHHHHHHTSCEEEES
T ss_pred EEEEECCeeCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCceEECC
Confidence 5799999999999999999999999999999999999999963 3678899999999999987654
No 28
>2ldi_A Zinc-transporting ATPase; metal homeostasis, metallochaperones, hydrolase; NMR {Synechocystis SP}
Probab=99.28 E-value=1e-11 Score=81.71 Aligned_cols=62 Identities=24% Similarity=0.385 Sum_probs=56.5
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAE 63 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~ 63 (200)
.+|+|+||+|.+|+.+|+++|++++||.++.+|+.+++++|.. .++.++|.++|+++||.+.
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~ 69 (71)
T 2ldi_A 5 QQMQVGGMRCAACASSIERALERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLA 69 (71)
T ss_dssp EEEEEETCTTSGGGHHHHTGGGGCSSEEEEEEETTTTEEEEEECTTTCCTHHHHHHHHTTTCEEE
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCeeEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCCcc
Confidence 5799999999999999999999999999999999999999963 3677889999999999764
No 29
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=99.26 E-value=1.3e-11 Score=94.29 Aligned_cols=67 Identities=24% Similarity=0.380 Sum_probs=61.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEe---ccCCHHHHHHHHHhcCCcEEEcccC
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVT---GLLDPAIIMQTIGKLGVEAELLAYE 68 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~---~~v~~~~I~~aI~k~Gy~a~~~~~~ 68 (200)
++|+|+||+|++|+++|+++|++++||.+++||+.+++++|. ..++.++|+++|+++||.+.+...+
T Consensus 76 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~~ 145 (151)
T 1p6t_A 76 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGEQ 145 (151)
T ss_dssp EEEEESSCCSSSHHHHHHHHHTTSSSEEECCEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCSS
T ss_pred cEEEecCCCCHHHHHHHHHHHhcCCCceEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCCeEEcCcc
Confidence 579999999999999999999999999999999999999997 3478899999999999999876544
No 30
>1jww_A Potential copper-transporting ATPase; beta-alpha-beta-BETA-alpha-beta, hydrolase; NMR {Bacillus subtilis} SCOP: d.58.17.1 PDB: 2voy_A 1kqk_A
Probab=99.26 E-value=1.9e-11 Score=83.12 Aligned_cols=66 Identities=24% Similarity=0.362 Sum_probs=59.4
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEccc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLAY 67 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~~ 67 (200)
.+|+|+||+|.+|+.+|+++|.+++||.++.+|+.+++++|.. .++.++|.++|+++||.+.....
T Consensus 5 ~~~~v~gm~C~~C~~~i~~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~ 73 (80)
T 1jww_A 5 AEFDIEGMTCAACANRIEKRLNKIEGVANAPVNFALETVTVEYNPKEASVSDLKEAVDKLGYKLKLKGE 73 (80)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHTSTTEEECCCCSSSSEEEEEECTTTCCHHHHHHHHHHHTSEEEECCS
T ss_pred EEEEECCccCHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHcCCeEEecCc
Confidence 5799999999999999999999999999999999999999963 46788999999999999877543
No 31
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.25 E-value=2e-11 Score=92.64 Aligned_cols=63 Identities=21% Similarity=0.404 Sum_probs=58.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~ 64 (200)
++|+|+||+|++|+.+|+++|++++||.+++||+.+++++|.. .++.++|+++|+++||.+.+
T Consensus 82 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~ 147 (149)
T 2ew9_A 82 IELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASL 147 (149)
T ss_dssp EEEEEESCCSHHHHHHHHHHHHHSSSCCEEEEETTTTEEEEECCTTTSCHHHHHHHHHHHTCEEEC
T ss_pred eEEEEEeccCHHHHHHHHHHHhcCCCeEEEEEEcCCCEEEEEECCCCCCHHHHHHHHHhCCCceEe
Confidence 5799999999999999999999999999999999999999974 36889999999999998765
No 32
>2ew9_A Copper-transporting ATPase 2; copper trafficking, ferrodoxin-like fold, structural genomics, structural proteomics in europe, spine, hydrolase; NMR {Homo sapiens}
Probab=99.22 E-value=4.1e-11 Score=90.96 Aligned_cols=101 Identities=23% Similarity=0.366 Sum_probs=77.7
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEcccCCChHHHHHHH
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLAYEKDPKKAKKKL 78 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~~~~~~~~~~~~~ 78 (200)
++|+|+||+|++|+.+|+++|.+++||.++.+|+.+++++|.. ..+.++|.++|+++||.+.........
T Consensus 6 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~~~~~~~~~~------- 78 (149)
T 2ew9_A 6 CFLQIKGMTCASCVSNIERNLQKEAGVLSVLVALMAGKAEIKYDPEVIQPLEIAQFIQDLGFEAAVMEDYAGS------- 78 (149)
T ss_dssp EEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCEEEECSCSCCS-------
T ss_pred EEEEECCeecHHHHHHHHHHHhcCCCcEEEEEEecCCEEEEEEcCCCCCHHHHHHHHhcCCCceEeecccccc-------
Confidence 6799999999999999999999999999999999999999963 367889999999999987654211000
Q ss_pred HHHHhccccCCcCccccccCCCCCCcccccccceecCCCcccCCCCCCCCcccCCCcC
Q 043962 79 DHFLKGNSKDNKRNLEEIDDHDHDDRGGYEYDARYAMPNCTSCHHPNYGTRRVLPGFP 136 (200)
Q Consensus 79 ~~~~~~~~~~n~~~~~~~~~~~~~~s~~~~~pl~~~~m~CasC~~~~~~~~~~lp~~~ 136 (200)
.-.+-|.+.+|.|++|....+..+..++++.
T Consensus 79 ---------------------------~~~~~~~v~gm~C~~C~~~ie~~l~~~~gv~ 109 (149)
T 2ew9_A 79 ---------------------------DGNIELTITGMTCASCVHNIESKLTRTNGIT 109 (149)
T ss_dssp ---------------------------SSEEEEEEESCCSHHHHHHHHHHHHHSSSCC
T ss_pred ---------------------------cceeEEEEEeccCHHHHHHHHHHHhcCCCeE
Confidence 0012256789999999875444445566654
No 33
>2ofg_X Zinc-transporting ATPase; ferredoxin-like fold, beta-alpha-beta-BETA-alpha-beta, struc genomics, hydrolase, membrane protein; NMR {Synechocystis SP} PDB: 2ofh_X
Probab=99.19 E-value=6.1e-11 Score=88.05 Aligned_cols=63 Identities=22% Similarity=0.323 Sum_probs=57.5
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~ 64 (200)
++|+|+||+|.+|+.+|+++|++++||.+++||+.+++++|.. .++.++|.++|+++||.+..
T Consensus 10 ~~l~v~Gm~C~~Ca~~Ie~~L~~~~GV~~v~v~~~~~~~~V~~~~~~~~~~~i~~~i~~~Gy~~~~ 75 (111)
T 2ofg_X 10 QQMQVGGMDCTSCKLKIEGSLERLKGVAEASVTVATGRLTVTYDPKQVSEITIQERIAALGYTLAE 75 (111)
T ss_dssp EEEEESCCCGGGTHHHHHHHHTTSSSEEEEEEETTTTEEEEEECTTTCSHHHHHHHHHTTTCCEEC
T ss_pred EEEEECCcCCHHHHHHHHHHHHcCCCeeEEEEECCCCEEEEEECCCCCCHHHHHHHHHHcCCeeee
Confidence 5799999999999999999999999999999999999999974 36789999999999998754
No 34
>2kkh_A Putative heavy metal transporter; zinc transport, metal binding, metal selectivity, ferredoxin fold, ATP-binding, hydrolase; NMR {Arabidopsis thaliana}
Probab=99.16 E-value=1.6e-10 Score=82.63 Aligned_cols=66 Identities=20% Similarity=0.276 Sum_probs=59.5
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEecc---CCHHHHHHHHHhcCCcEEEccc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGL---LDPAIIMQTIGKLGVEAELLAY 67 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~---v~~~~I~~aI~k~Gy~a~~~~~ 67 (200)
++|.|+||+|.+|+.+|+++|.+++||..+.+|+.+++++|... ++.+.|.++|+++||.+.+...
T Consensus 18 ~~~~v~gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 86 (95)
T 2kkh_A 18 SYFDVLGICCTSEVPIIENILKSLDGVKEYSVIVPSRTVIVVHDSLLISPFQIAKALNEARLEANVRVN 86 (95)
T ss_dssp EEEEETTCCTTTTHHHHHHHHHHSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTCCEEESCC
T ss_pred EEEEECCcCCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEecC
Confidence 57899999999999999999999999999999999999999742 5789999999999999877544
No 35
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=99.15 E-value=1.2e-10 Score=94.15 Aligned_cols=66 Identities=21% Similarity=0.445 Sum_probs=59.3
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEccc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLAY 67 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~~ 67 (200)
++|+|+||+|++|+.+|+++|++++||.++.||+.+++++|.. .++.++|+++|+++||.+.++..
T Consensus 124 ~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~Gy~~~~~~~ 192 (202)
T 2rop_A 124 TLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEGTATVLYNPAVISPEELRAAIEDMGFEASVVSE 192 (202)
T ss_dssp EEEEESCCCSTHHHHHHHHHGGGSSSEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHTSCEEEC--
T ss_pred EEEEECCccCHHHHHHHHHHHHcCCCeEEEEEEccCCEEEEEECCCCCCHHHHHHHHHHcCCceEEcCC
Confidence 5799999999999999999999999999999999999999973 36889999999999999887644
No 36
>1qup_A Superoxide dismutase 1 copper chaperone; two domains, beta-alpha-beta-BETA-alpha-beta and beta barrel; 1.80A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.13 E-value=1.5e-10 Score=97.17 Aligned_cols=66 Identities=20% Similarity=0.436 Sum_probs=61.6
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEcccC
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELLAYE 68 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~~~~ 68 (200)
++|+|+ |+|++|+++||++|++++||.+++||+.+++++|...++.++|+++|+++||.+.++...
T Consensus 8 ~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aI~~~Gy~a~~~~~~ 73 (222)
T 1qup_A 8 ATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG 73 (222)
T ss_dssp EEEECC-CCSTTHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHHTTCCCEEECCS
T ss_pred EEEEEc-cccHHHHHHHHHHHhcCCCeeEEEEEcCCCEEEEeccCCHHHHHHHHHHcCCccccccCC
Confidence 579999 999999999999999999999999999999999998889999999999999998886554
No 37
>2aj0_A Probable cadmium-transporting ATPase; ferrodoxin-like fold, beta-alpha-beta-BETA-alpha-beta, metal binding protein, hydrolase; NMR {Listeria monocytogenes} PDB: 2aj1_A
Probab=99.10 E-value=1.2e-10 Score=78.08 Aligned_cols=58 Identities=22% Similarity=0.432 Sum_probs=51.5
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAE 63 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~ 63 (200)
.+|.|+||+|.+|+.+|+++|++++||.++++|+.+++++|....+ .+.|+++||.+.
T Consensus 5 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~----~~~i~~~Gy~~~ 62 (71)
T 2aj0_A 5 TVYRVDGLSCTNCAAKFERNVKEIEGVTEAIVNFGASKITVTGEAS----IQQVEQAGAFEH 62 (71)
T ss_dssp EEEEEESCCCHHHHHHHHHHHHHSTTEEEEEECCSSEEEEEEESCC----HHHHHHHHTTTT
T ss_pred EEEEECCcccHHHHHHHHHHHHcCCCeEEEEEECCCCEEEEEecCc----HHHHHHhCCCcc
Confidence 5799999999999999999999999999999999999999986554 457789999754
No 38
>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}
Probab=99.09 E-value=3.7e-11 Score=115.58 Aligned_cols=98 Identities=11% Similarity=0.095 Sum_probs=74.1
Q ss_pred CEEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcEEEcccCCChHHHHHH
Q 043962 1 ICVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEAELLAYEKDPKKAKKK 77 (200)
Q Consensus 1 ~v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a~~~~~~~~~~~~~~~ 77 (200)
+++|+|+||+|++|+.+||++|++++||.+++||+.+++++|+. .++.++|.++|+++||++......... .+++
T Consensus 3 ~~~l~V~GM~Ca~Ca~~Ie~~L~~~~GV~~v~Vnl~~~~~~V~~d~~~~~~~~i~~ai~~~Gy~~~~~~~~~~~--~~~~ 80 (723)
T 3j09_A 3 ERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDEQAAVSA--EVEH 80 (723)
T ss_dssp CEEEEEETCCSHHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHHHHCCEESSCCCCCCC--CCCC
T ss_pred eEEEEeCCCCchHHHHHHHHHHhcCCCceEEEEEcCCCEEEEEeCCCcCCHHHHHHHHHhcCCcccccccccch--hhHH
Confidence 46899999999999999999999999999999999999999963 478999999999999987543222111 0111
Q ss_pred HHHHHhccccCCcCccccccCCCCCCcccccccceecCC
Q 043962 78 LDHFLKGNSKDNKRNLEEIDDHDHDDRGGYEYDARYAMP 116 (200)
Q Consensus 78 ~~~~~~~~~~~n~~~~~~~~~~~~~~s~~~~~pl~~~~m 116 (200)
.+.++.+++ .+.+++.|+++.++
T Consensus 81 ~~~~~~~~~----------------~~~~~~~~~~~~~~ 103 (723)
T 3j09_A 81 LSRMKRKLY----------------VAAFAGVLLLFLAH 103 (723)
T ss_dssp CCCSCCCSS----------------STTTTHHHHHHHTT
T ss_pred HHHHHHHHH----------------HHHHHHHHHHHHHH
Confidence 112223333 46778888887776
No 39
>1jk9_B CCS, copper chaperone for superoxide dismutase; protein-protein complex, heterodimer, metallochaperone, amyotrophic lateral sclerosis; 2.90A {Saccharomyces cerevisiae} SCOP: b.1.8.1 d.58.17.1
Probab=99.04 E-value=4.3e-10 Score=95.94 Aligned_cols=66 Identities=20% Similarity=0.436 Sum_probs=61.3
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEcccC
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELLAYE 68 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~~~~ 68 (200)
++|+|+ |+|++|+.+||++|++++||.+++||+.+++++|...++.++|+++|+++||.+.+....
T Consensus 9 ~~l~V~-MtC~~Ca~~IekaL~~l~GV~~v~Vnl~~~~v~V~~~~~~~~I~~aIe~~Gy~a~~~~~~ 74 (249)
T 1jk9_B 9 ATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVAPSTIINTLRNCGKDAIIRGAG 74 (249)
T ss_dssp EEEECC-CCSSSHHHHHHHHHTTCTTEEEEEEETTTTEEEEEESSCHHHHHHHHHTTTCCCEEEEES
T ss_pred EEEEEe-eccHHHHHHHHHHHhccCCeeEEEEEcCCCeEEEecCCCHHHHHHHHHHhCCCcccccCC
Confidence 579999 999999999999999999999999999999999998889999999999999998876543
No 40
>1p6t_A Potential copper-transporting ATPase; COPA, P-type ATPase, water-soluble region, beta-alpha-beta- beta-alpha-beta fold; NMR {Bacillus subtilis} SCOP: d.58.17.1 d.58.17.1 PDB: 2rml_A
Probab=98.84 E-value=9.7e-09 Score=78.14 Aligned_cols=61 Identities=26% Similarity=0.403 Sum_probs=55.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhcCCcE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKLGVEA 62 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~Gy~a 62 (200)
.+|.|+||+|.+|+.+|++.|.+++||.++.+|+.+++++|.. ..+.++|.++++++||.+
T Consensus 8 ~~~~v~gm~C~~C~~~ie~~l~~~~gv~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~G~~~ 71 (151)
T 1p6t_A 8 IAMQVSGMTCAACAARIEKGLKRMPGVTDANVNLATETVNVIYDPAETGTAAIQEKIEKLGYHV 71 (151)
T ss_dssp EEEEEESCCSSHHHHHHHHHHTTSSSEEEEEEEGGGTEEEEEECTTTSCHHHHHHHHHHHTCEE
T ss_pred EEEEECCCcCHHHHHHHHHHHhcCCCeeEEEEEccCCEEEEEEcCCcCCHHHHHHHHHHcCCcc
Confidence 4689999999999999999999999999999999999999863 357888999999999965
No 41
>2rop_A Copper-transporting ATPase 2; wilson protein, mobility, protein-protein interaction, alternative splicing, ATP-binding, copper transport cytoplasm; NMR {Homo sapiens}
Probab=98.79 E-value=1e-08 Score=82.82 Aligned_cols=62 Identities=19% Similarity=0.373 Sum_probs=55.4
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEec---cCCHHHHHHHHHhc---CCcEE
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG---LLDPAIIMQTIGKL---GVEAE 63 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~---~v~~~~I~~aI~k~---Gy~a~ 63 (200)
++|+|+||+|.+|+.+|+++|.+++||.++.||+.+++++|.. .++.++|.++|+++ ||.+.
T Consensus 22 ~~l~v~Gm~C~~C~~~ie~~l~~~~GV~~~~v~~~~~~~~v~~~~~~~~~~~i~~~i~~~~~gg~~v~ 89 (202)
T 2rop_A 22 LQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVKYDPSCTSPVALQRAIEALPPGNFKVS 89 (202)
T ss_dssp EEEEEESGGGSTHHHHHHHHTTSBTTEEEEEEETTTTEEEEEECTTTCCHHHHHHHHTTSSSSCSEEE
T ss_pred EEEEECCeEcHHHHHHHHHHHhcCCCeEEEEEEecCCEEEEEECCCCCCHHHHHHHHHHhccCCeEEE
Confidence 5799999999999999999999999999999999999999963 36788999999998 36654
No 42
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=87.31 E-value=1 Score=33.00 Aligned_cols=50 Identities=22% Similarity=0.280 Sum_probs=36.8
Q ss_pred HHHHHhhccCCceEEEEec-----CCCeEE--Eec-cCCHHHHHHHHHhcCCcEEEcc
Q 043962 17 KMNKKLLKIQGVQGIHIDT-----EEGLVI--VTG-LLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 17 kIekaL~kl~GV~~v~Vnl-----~~~kvt--V~~-~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
.+-+.|.+++||..|++.+ .++.+. |+| .++.++|.++|++.|-.+..+.
T Consensus 23 dlA~~l~~~~gV~gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSID 80 (100)
T 3bpd_A 23 VFALKLSELENVDGVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVD 80 (100)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 4556789999998876643 444444 455 4999999999999998776543
No 43
>2x3d_A SSO6206; unknown function; 2.70A {Sulfolobus solfataricus}
Probab=86.72 E-value=1.6 Score=31.65 Aligned_cols=50 Identities=20% Similarity=0.385 Sum_probs=37.0
Q ss_pred HHHHHhhccCCceEEEEec-----CCCeEE--Eec-cCCHHHHHHHHHhcCCcEEEcc
Q 043962 17 KMNKKLLKIQGVQGIHIDT-----EEGLVI--VTG-LLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 17 kIekaL~kl~GV~~v~Vnl-----~~~kvt--V~~-~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
.+-+.|.+++||..+++.+ .++.+. |+| .++.++|.++|++.|-.++.+.
T Consensus 22 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkItIEG~~idfd~I~~~IE~~Gg~IHSID 79 (96)
T 2x3d_A 22 DLAERISKLDGVEGVNISVTDMDVETMGLMIIIEGTSLNFDDIRKMLEEEGCAIHSID 79 (96)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEECSSEEEEEEEEEESSCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 3556788999998876643 444444 455 4999999999999998876553
No 44
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=83.75 E-value=3.2 Score=30.16 Aligned_cols=50 Identities=26% Similarity=0.371 Sum_probs=36.6
Q ss_pred HHHHHhhccCCceEEEEe-----cCCCeEE--Eec-cCCHHHHHHHHHhcCCcEEEcc
Q 043962 17 KMNKKLLKIQGVQGIHID-----TEEGLVI--VTG-LLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 17 kIekaL~kl~GV~~v~Vn-----l~~~kvt--V~~-~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
.+-+.|.+++||..+++. ..+..+. |+| .++.++|.++|++.|-.++.+.
T Consensus 23 d~A~~l~~~~gV~gVnItv~EvD~eTe~lkitiEG~~id~d~I~~~IE~~Gg~IHSID 80 (97)
T 2raq_A 23 EYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSVD 80 (97)
T ss_dssp HHHHHHHHSTTCCEEEEEEEEECSSCEEEEEEEECSSCCHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhCCCcceEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeee
Confidence 345678888998877654 3555444 456 4999999999999998876553
No 45
>3lvj_C Sulfurtransferase TUSA; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 2.44A {Escherichia coli} SCOP: d.68.3.3 PDB: 3lvk_B* 1dcj_A
Probab=78.35 E-value=11 Score=25.80 Aligned_cols=55 Identities=11% Similarity=-0.061 Sum_probs=41.4
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEE--eccCCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIV--TGLLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV--~~~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
.++.+.|..|..=.-+++++|.+++.- +.+.| +.....++|.+.+++.||.+...
T Consensus 11 ~~lD~rGl~CP~Pvl~~kkal~~l~~G---------~~l~V~~dd~~a~~di~~~~~~~G~~~~~~ 67 (82)
T 3lvj_C 11 HTLDALGLRCPEPVMMVRKTVRNMQPG---------ETLLIIADDPATTRDIPGFCTFMEHELVAK 67 (82)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTSCTT---------CEEEEEECCTTHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 467788999999999999999987421 22333 23355688999999999987654
No 46
>1jdq_A TM006 protein, hypothetical protein TM0983; structural genomics; NMR {Thermotoga maritima} SCOP: d.68.3.3
Probab=73.41 E-value=13 Score=26.52 Aligned_cols=56 Identities=20% Similarity=0.184 Sum_probs=42.2
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEe--ccCCHHHHHHHHHhcCCcEEEcc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVT--GLLDPAIIMQTIGKLGVEAELLA 66 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~--~~v~~~~I~~aI~k~Gy~a~~~~ 66 (200)
.+|.+.|..|..=.-+++++|.+++.= +.+.|. .....++|.+.+++.|+.+....
T Consensus 27 ~~LD~rGl~CP~Pvl~tkkaL~~l~~G---------e~L~Vl~dd~~a~~dI~~~~~~~G~~v~~~e 84 (98)
T 1jdq_A 27 KTLDVRGEVCPVPDVETKRALQNMKPG---------EILEVWIDYPMSKERIPETVKKLGHEVLEIE 84 (98)
T ss_dssp EEEECSSCCSSHHHHHHHHHHHTCCTT---------CEEEEEESSCTHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHhCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 457888999999999999999997422 233333 33557899999999999886643
No 47
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=71.26 E-value=12 Score=26.75 Aligned_cols=44 Identities=25% Similarity=0.266 Sum_probs=29.8
Q ss_pred hHHHHHHHhhccCCceEEEEecCCCeEEEec-cCCHHHHHHHHHh
Q 043962 14 CPSKMNKKLLKIQGVQGIHIDTEEGLVIVTG-LLDPAIIMQTIGK 57 (200)
Q Consensus 14 Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~-~v~~~~I~~aI~k 57 (200)
=...|.++|.+++||+-..++-.++++.|+- ..+.+++.+.|++
T Consensus 18 ~~~~V~~~L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~ 62 (95)
T 2jsx_A 18 RISDISTQLNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIES 62 (95)
T ss_dssp SHHHHHHHHTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHH
T ss_pred CHHHHHHHHHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 3678999999999995445566678888752 3455555555544
No 48
>3hz7_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Desulfitobacterium hafniense}
Probab=66.02 E-value=9.3 Score=26.62 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=41.0
Q ss_pred EEEEEecCCChhhHHHHHHHhhccC--CceEEEEecCCCeEEEe--ccCCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQ--GVQGIHIDTEEGLVIVT--GLLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~--GV~~v~Vnl~~~kvtV~--~~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
.++.+.|..|..=.-+++++|.+++ | +.+.|. .....++|.+.+++.||.+...
T Consensus 2 k~lD~rGl~CP~Pvl~~kkal~~l~~~G----------~~L~V~~dd~~a~~dI~~~~~~~G~~v~~~ 59 (87)
T 3hz7_A 2 ITIDALGQVCPIPVIRAKKALAELGEAG----------GVVTVLVDNDISRQNLQKMAEGMGYQSEYL 59 (87)
T ss_dssp EEEECTTCCTTHHHHHHHHHHHTTGGGC----------CEEEEEESSHHHHHHHHHHHHHHTCEEEEE
T ss_pred cEEEcCCCCCCHHHHHHHHHHHhccCCC----------CEEEEEECCccHHHHHHHHHHHCCCEEEEE
Confidence 3577889999999999999999873 3 233332 2345688999999999988654
No 49
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=61.83 E-value=9.4 Score=27.46 Aligned_cols=24 Identities=21% Similarity=0.246 Sum_probs=18.6
Q ss_pred HHHHHHHh-hccCCceEEEEecCCC
Q 043962 15 PSKMNKKL-LKIQGVQGIHIDTEEG 38 (200)
Q Consensus 15 a~kIekaL-~kl~GV~~v~Vnl~~~ 38 (200)
...|+++| .+++||.+|+|++..+
T Consensus 64 ~~~i~~al~~~l~Gv~~V~V~l~~~ 88 (108)
T 3lno_A 64 VSDVKKVLSTNVPEVNEIEVNVVWN 88 (108)
T ss_dssp HHHHHHHHHHHCTTCCCEEEEECCS
T ss_pred HHHHHHHHHHhCCCCceEEEEEEec
Confidence 45688888 8899999888776543
No 50
>3cq1_A Putative uncharacterized protein TTHB138; DTDP-4-keto-L-rhamnose reductase, plasmid, oxidoreductase, structural genomics, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2cu6_A 3cq2_A 3cq3_A*
Probab=60.90 E-value=8.8 Score=27.24 Aligned_cols=34 Identities=18% Similarity=0.522 Sum_probs=23.8
Q ss_pred EEEEecCCChhhH------HHHHHHhhccCCceEEEEecCC
Q 043962 3 VLKVELQCCEACP------SKMNKKLLKIQGVQGIHIDTEE 37 (200)
Q Consensus 3 ~l~V~GmtC~~Ca------~kIekaL~kl~GV~~v~Vnl~~ 37 (200)
.+.+.. ++.+|. ..|+++|++++||.+++|++..
T Consensus 44 ~v~l~l-t~~~cp~~~~l~~~i~~al~~l~gv~~V~V~l~~ 83 (103)
T 3cq1_A 44 YVRMTL-TTPGCPLHDSLGEAVRQALSRLPGVEEVEVEVTF 83 (103)
T ss_dssp EEEECC-SSSSCCSSCHHHHHHHHHHHTSTTCCEEEEEECC
T ss_pred EEEEEE-CCCCCcHHHHHHHHHHHHHHhCCCceeEEEEEec
Confidence 344444 355553 5788899999999998887544
No 51
>1owx_A Lupus LA protein, SS-B, LA; RRM, transcription; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=60.19 E-value=42 Score=24.77 Aligned_cols=57 Identities=11% Similarity=0.064 Sum_probs=43.9
Q ss_pred EEEEEecCCCh-hhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhc
Q 043962 2 CVLKVELQCCE-ACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKL 58 (200)
Q Consensus 2 v~l~V~GmtC~-~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~ 58 (200)
+.+.|.|..-. .+...|+..+++...|..|++.....+..|......++..++++++
T Consensus 19 ~il~v~~l~~~~~sredLke~F~~~G~V~~Vd~~~g~~tgfVrf~~~~~~A~~av~~l 76 (121)
T 1owx_A 19 CLLKFSGDLDDQTCREDLHILFSNHGEIKWIDFVRGAKEGIILFKEKAKEALGKAKDA 76 (121)
T ss_dssp CEEEEEESCCSSCCHHHHHHHTCSSCCEEEEECCTTCSEEEEEESSCHHHHHHHHHHT
T ss_pred eEEEEecCCCCcCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCChHHHHHHHHHh
Confidence 45778877666 7899999999999889999998888888887654355566666665
No 52
>1je3_A EC005, hypothetical 8.6 kDa protein in AMYA-FLIE intergenic region; mixed alpha-beta structure, structural genomics; NMR {Escherichia coli} SCOP: d.68.3.3
Probab=57.72 E-value=15 Score=26.24 Aligned_cols=54 Identities=9% Similarity=-0.031 Sum_probs=39.5
Q ss_pred EEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEE--eccCCHHHHHHHHHhcCCcEEEc
Q 043962 3 VLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIV--TGLLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 3 ~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV--~~~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
++.+.|..|..=.-+++++|.+++.-+ .+.| +.....++|.+.+++.|+.+...
T Consensus 29 ~LD~rGl~CP~PvlktkkaL~~l~~Ge---------~L~Vl~dd~~a~~dIp~~~~~~G~~v~~~ 84 (97)
T 1je3_A 29 RLDMVGEPCPYPAVATLEAMPQLKKGE---------ILEVVSDCPQSINNIPLDARNHGYTVLDI 84 (97)
T ss_dssp EECSBCCSSSSSTHHHHHHTTTCCSSC---------EEEEEEBCSSSSCHHHHHHHHHTCSEEEE
T ss_pred EEeCCCCCCCHHHHHHHHHHHcCCCCC---------EEEEEECCcchHHHHHHHHHHCCCEEEEE
Confidence 467789999999999999999874322 2333 22345577899999999987653
No 53
>2nyt_A Probable C->U-editing enzyme apobec-2; cytidine deaminase, zinc-ION binding, hydrolase; 2.50A {Homo sapiens} PDB: 2rpz_A
Probab=57.09 E-value=21 Score=28.55 Aligned_cols=61 Identities=13% Similarity=0.197 Sum_probs=42.5
Q ss_pred EEEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEeccCCHHHHHHHHHhcCCcEEEc
Q 043962 2 CVLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVTGLLDPAIIMQTIGKLGVEAELL 65 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~~~v~~~~I~~aI~k~Gy~a~~~ 65 (200)
+++-|..--|..|+..|-++|++.+||..|-+-...- .. .+-...+-++.++++|-.++.+
T Consensus 85 ~TlYvTlePC~~Ca~aIi~al~~~~gI~rVV~~~~d~--~~-~~p~~~~g~~~L~~aGI~V~~~ 145 (190)
T 2nyt_A 85 VTWYVSSSPCAACADRIIKTLSKTKNLRLLILVGRLF--MW-EEPEIQAALKKLKEAGCKLRIM 145 (190)
T ss_pred eEEEEEcChHHHHHHHHHHhhhhcCCccEEEEEeecC--Cc-CChHHHHHHHHHHHCCCEEEEe
Confidence 5678888889999999999999999998765421100 00 0111246678889999988765
No 54
>4gwb_A Peptide methionine sulfoxide reductase MSRA 3; structural genomics, protein structure initiative, nysgrc, R PSI-biology; 1.20A {Sinorhizobium meliloti}
Probab=51.54 E-value=29 Score=27.37 Aligned_cols=45 Identities=16% Similarity=0.171 Sum_probs=35.5
Q ss_pred hhhHHHHHHHhhccCCceEEEEecCCC---------------eEEEe---ccCCHHHHHHHHH
Q 043962 12 EACPSKMNKKLLKIQGVQGIHIDTEEG---------------LVIVT---GLLDPAIIMQTIG 56 (200)
Q Consensus 12 ~~Ca~kIekaL~kl~GV~~v~Vnl~~~---------------kvtV~---~~v~~~~I~~aI~ 56 (200)
.+|=+-+|..+.+++||.++.+-.+.+ .|.|+ ..++.++|++..-
T Consensus 9 gGCFWg~E~~f~~l~GV~~t~~GYagG~~~nPtY~~v~~HaE~V~V~yDp~~isy~~LL~~F~ 71 (168)
T 4gwb_A 9 GGCFWGMQDLIRKLPGVIETRVGYTGGDVPNATYRNHGTHAEGIEIIFDPERISYRRILELFF 71 (168)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCTTCBTTBCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred ccCccchHHHHhcCCCeEEEEEEcCCCcCCCCcccccCceEEEEEEEECCCCCCHHHHHHHHH
Confidence 478888899999999999999987665 44454 3488899988764
No 55
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=49.93 E-value=13 Score=26.24 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=18.3
Q ss_pred HHHHHHhhccCCceEEEEecCCC
Q 043962 16 SKMNKKLLKIQGVQGIHIDTEEG 38 (200)
Q Consensus 16 ~kIekaL~kl~GV~~v~Vnl~~~ 38 (200)
..|+++|+.++||.+++|++..+
T Consensus 63 ~~i~~al~~l~gv~~v~V~l~~~ 85 (103)
T 1uwd_A 63 SDAEEAIKKIEGVNNVEVELTFD 85 (103)
T ss_dssp HHHHHHHHTSSSCCEEEEEECCS
T ss_pred HHHHHHHHhCCCcceEEEEEecC
Confidence 46888899999999998875443
No 56
>1fvg_A Peptide methionine sulfoxide reductase; oxidoreductase; 1.60A {Bos taurus} SCOP: d.58.28.1 PDB: 1fva_A 2l90_A*
Probab=46.13 E-value=35 Score=27.64 Aligned_cols=45 Identities=16% Similarity=0.241 Sum_probs=35.1
Q ss_pred hhhHHHHHHHhhccCCceEEEEecCCCe-------------------EEEe---ccCCHHHHHHHHH
Q 043962 12 EACPSKMNKKLLKIQGVQGIHIDTEEGL-------------------VIVT---GLLDPAIIMQTIG 56 (200)
Q Consensus 12 ~~Ca~kIekaL~kl~GV~~v~Vnl~~~k-------------------vtV~---~~v~~~~I~~aI~ 56 (200)
.+|=+-+|+.+.+++||.++.+-.+.+. |.|. ..++.++|++..-
T Consensus 50 gGCFWg~E~~F~~l~GV~~t~vGYagG~~~nPtY~~Vcsg~TGHaEaV~V~yDp~~isy~~LL~~F~ 116 (199)
T 1fvg_A 50 MGCFWGAERKFWTLKGVYSTQVGFAGGYTPNPTYKEVCSGKTGHAEVVRVVFQPEHISFEELLKVFW 116 (199)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeccCCCCCCCChhheecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4688888999999999999999876554 4454 3478899988764
No 57
>1pav_A Hypothetical protein TA1170/TA1414; structural genomics, structure, fast NMR, semiautomated analysis; NMR {Thermoplasma acidophilum} SCOP: d.68.3.3
Probab=44.93 E-value=16 Score=24.39 Aligned_cols=53 Identities=15% Similarity=-0.019 Sum_probs=38.7
Q ss_pred EEEEecCCChhhHHHHHHHhhccCCceEEEEecCCCeEEEe--ccCCHHHHHHHHHhcCCcEEE
Q 043962 3 VLKVELQCCEACPSKMNKKLLKIQGVQGIHIDTEEGLVIVT--GLLDPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 3 ~l~V~GmtC~~Ca~kIekaL~kl~GV~~v~Vnl~~~kvtV~--~~v~~~~I~~aI~k~Gy~a~~ 64 (200)
++.+.|..|..=.-+++++|.+++.- +.+.|. .....++|.+.+++.|+....
T Consensus 8 ~lD~rGl~CP~Pvl~~k~al~~l~~G---------~~L~V~~dd~~a~~di~~~~~~~G~~~~~ 62 (78)
T 1pav_A 8 VIDARGSYCPGPLMELIKAYKQAKVG---------EVISVYSTDAGTKKDAPAWIQKSGQELVG 62 (78)
T ss_dssp CCCBSSCSSCTTHHHHHHHHTTSCTT---------CCEECCBSSSCHHHHHHHHHHHHTEEECC
T ss_pred EEECCCCCCCHHHHHHHHHHHcCCCC---------CEEEEEECCccHHHHHHHHHHHCCCEEEE
Confidence 35677999999999999999987422 233443 224568899999999997643
No 58
>3bqh_A PILB, peptide methionine sulfoxide reductase MSRA/MSRB; methionine sulfoxide reductase A, oxidized form, elect transport; 1.95A {Neisseria meningitidis} PDB: 3bqe_A 3bqf_A* 3bqg_A
Probab=40.90 E-value=46 Score=26.79 Aligned_cols=45 Identities=24% Similarity=0.192 Sum_probs=34.3
Q ss_pred hhhHHHHHHHhhccCCceEEEEecCCCe-------------------EEEe---ccCCHHHHHHHHH
Q 043962 12 EACPSKMNKKLLKIQGVQGIHIDTEEGL-------------------VIVT---GLLDPAIIMQTIG 56 (200)
Q Consensus 12 ~~Ca~kIekaL~kl~GV~~v~Vnl~~~k-------------------vtV~---~~v~~~~I~~aI~ 56 (200)
.+|=+-+|..+.+++||.++.+-.+.+. |.|. ..++.++|++..-
T Consensus 9 gGCFWg~E~~F~~~~GV~~t~vGYagG~~~nPtY~~Vc~g~tGHaEaV~V~yDp~~isy~~LL~~f~ 75 (193)
T 3bqh_A 9 GGCFWGLEAYFQRIDGVVDAVSGYANGNTKNPSYEDVSYRHTGHAETVKVTYDADKLSLDDILQYFF 75 (193)
T ss_dssp ESCHHHHHHHHHTSTTEEEEEEEEESCSSSSCCHHHHHHSCCCCEEEEEEEEETTTCCHHHHHHHHH
T ss_pred cCCeeehHHHHhcCCCEEEEEEeccCCcCCCCChheeecCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4678888999999999999999775553 4444 3488889888763
No 59
>1ff3_A Peptide methionine sulfoxide reductase; alpha beta roll, PMSR, MSRA, oxidoreductase; 1.90A {Escherichia coli} SCOP: d.58.28.1 PDB: 2gt3_A 2iem_A
Probab=40.22 E-value=42 Score=27.45 Aligned_cols=46 Identities=11% Similarity=0.139 Sum_probs=35.0
Q ss_pred hhhHHHHHHHhhccCCceEEEEecCCC-------------------eEEEe---ccCCHHHHHHHHHh
Q 043962 12 EACPSKMNKKLLKIQGVQGIHIDTEEG-------------------LVIVT---GLLDPAIIMQTIGK 57 (200)
Q Consensus 12 ~~Ca~kIekaL~kl~GV~~v~Vnl~~~-------------------kvtV~---~~v~~~~I~~aI~k 57 (200)
.+|=+-+|+.+.+++||.++.+-.+.+ .|.|. ..++.++|++..-+
T Consensus 49 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtY~~VcsG~TGHaEaV~V~yDp~~isy~~LL~~F~~ 116 (211)
T 1ff3_A 49 MGXFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYDPSVISYEQLLQVFWE 116 (211)
T ss_dssp CSSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHHTCSCCEEEEEEEECTTTSCHHHHHHHHHH
T ss_pred cCCeEEehhhHhcCCCeEEEEeeecCCCCCCCChhhccCCCCCceEEEEEEECCCcCCHHHHHHHHHH
Confidence 468888899999999999999987643 24454 34888999887743
No 60
>2j89_A Methionine sulfoxide reductase A; MSRA, poplar, oxidoreductase; 1.7A {Populus trichocarpa}
Probab=39.82 E-value=48 Score=28.02 Aligned_cols=45 Identities=16% Similarity=0.237 Sum_probs=34.8
Q ss_pred hhhHHHHHHHhhccCCceEEEEecCCCe-------------------EEEe---ccCCHHHHHHHHH
Q 043962 12 EACPSKMNKKLLKIQGVQGIHIDTEEGL-------------------VIVT---GLLDPAIIMQTIG 56 (200)
Q Consensus 12 ~~Ca~kIekaL~kl~GV~~v~Vnl~~~k-------------------vtV~---~~v~~~~I~~aI~ 56 (200)
.+|=+-+|+.+.+++||.++.+-.+.+. |.|. ..++.++|++..-
T Consensus 101 gGCFWgvE~~F~~l~GV~~t~vGYaGG~t~nPTYeeVcsG~TGHaEaV~V~YDP~~ISy~~LL~~Fw 167 (261)
T 2j89_A 101 AGCFWGVELAFQRVPGVTKTEVGYTQGLLHNPTYEDVCTGTTNHNEVVRVQYDPKECSFDTLIDVLW 167 (261)
T ss_dssp ESSHHHHHHHHHTSTTEEEEEEEEESSSCSSCCHHHHHTTCSCCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCeeeeHHHHhhCCCeEEEEeeecCCCCCCCChhhcccCCCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4788888999999999999999876553 4454 3478888888763
No 61
>1xhj_A Nitrogen fixation protein NIFU; alpha-beta, NIFU-like, structural genomics, protein structur initiative, NESG, PSI; NMR {Staphylococcus epidermidis} SCOP: d.52.8.1
Probab=39.72 E-value=30 Score=24.34 Aligned_cols=30 Identities=27% Similarity=0.618 Sum_probs=21.3
Q ss_pred EEEEEecCCChhhHH-------HHHHHhh-ccCCceEEE
Q 043962 2 CVLKVELQCCEACPS-------KMNKKLL-KIQGVQGIH 32 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~-------kIekaL~-kl~GV~~v~ 32 (200)
|.++..|- |.+|.. .||+.|+ .++.|..|.
T Consensus 40 V~V~L~Ga-C~gCpss~~TLk~gIE~~L~~~vPev~~V~ 77 (88)
T 1xhj_A 40 VKLQLHGA-CGTCPSSTITLKAGIERALHEEVPGVIEVE 77 (88)
T ss_dssp EEEEEESS-CCSSCHHHHHHHHHHHHHHHHHSTTCCEEE
T ss_pred EEEEEeec-CCCCcchHHHHHHHHHHHHHHhCCCceEEE
Confidence 67788896 998864 4666665 567777654
No 62
>2z51_A NIFU-like protein 2, chloroplast; CNFU, iron-sulfur cluster biosynthesis, metal transport; 1.35A {Arabidopsis thaliana} PDB: 2jnv_A
Probab=39.34 E-value=33 Score=26.54 Aligned_cols=31 Identities=26% Similarity=0.651 Sum_probs=21.8
Q ss_pred EEEEEecCCChhhHH-------HHHHHhh-ccCCceEEEE
Q 043962 2 CVLKVELQCCEACPS-------KMNKKLL-KIQGVQGIHI 33 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~-------kIekaL~-kl~GV~~v~V 33 (200)
+.++..|- |.+|.. .||+.|+ +++.|..|..
T Consensus 37 V~v~l~Ga-C~gC~ss~~Tlk~~Ie~~L~~~vpev~~V~~ 75 (154)
T 2z51_A 37 VRVKLQGA-CGSCPSSTMTMKMGIERRLMEKIPEIVAVEA 75 (154)
T ss_dssp EEEEEEHH-HHTCHHHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EEEEEECC-CCCCCccHhHHHHHHHHHHHHhCCCceEEEE
Confidence 56788896 999987 4556665 5677776644
No 63
>2w7v_A General secretion pathway protein L; transport, type II secretion, transport protein; 2.30A {Vibrio parahaemolyticus}
Probab=38.94 E-value=49 Score=23.56 Aligned_cols=47 Identities=11% Similarity=0.117 Sum_probs=33.6
Q ss_pred HHHHHhhccCCce--EEEEecCCCeEEEec---c-CCHHHHHHHHHhcCCcEEE
Q 043962 17 KMNKKLLKIQGVQ--GIHIDTEEGLVIVTG---L-LDPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 17 kIekaL~kl~GV~--~v~Vnl~~~kvtV~~---~-v~~~~I~~aI~k~Gy~a~~ 64 (200)
.+..+|.++++|. +++.|-..+.+.|.- + .+.|++...+.+ ||.++.
T Consensus 16 ~L~~~l~~vp~l~~~sLryD~~R~ELrlq~~A~dF~~~E~lr~~l~~-gf~Ve~ 68 (95)
T 2w7v_A 16 ALPATLGQVKDLEITSFKYDGQRGEVRIHARSSDFQPFEQARVKLAE-KFNVEQ 68 (95)
T ss_dssp GHHHHHHTSTTCEEEEEEEETTTTEEEEEEEESSSHHHHHHHHHHHT-TEEEEE
T ss_pred HHHHHhccCCCceEEEEeecCCCCeEEEEEecCCHHHHHHHHHHhhc-CcEEeh
Confidence 4556788888875 555565777888752 2 346888888876 999886
No 64
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=37.71 E-value=53 Score=26.71 Aligned_cols=45 Identities=13% Similarity=0.173 Sum_probs=34.8
Q ss_pred hhhHHHHHHHhhccCCceEEEEecCCC---------------eEEEe---ccCCHHHHHHHHH
Q 043962 12 EACPSKMNKKLLKIQGVQGIHIDTEEG---------------LVIVT---GLLDPAIIMQTIG 56 (200)
Q Consensus 12 ~~Ca~kIekaL~kl~GV~~v~Vnl~~~---------------kvtV~---~~v~~~~I~~aI~ 56 (200)
.+|=+-+|..+.+++||.++.+-.+.+ .|.|. ..++.++|++..-
T Consensus 32 gGCFWg~E~~F~~l~GV~~t~vGYaGG~~~nPtYe~~G~HaEaV~V~yDp~~iSy~~LL~~Ff 94 (203)
T 1nwa_A 32 GGCFWGLQDLIRNQPGVVSTRVGYSGGNIPNATYRNHGTHAEAVEIIFDPTVTDYRTLLEFFF 94 (203)
T ss_dssp ESCHHHHHHHHTTSTTEEEEEEEEESSSCSSCCSSCCTTCEEEEEEEECTTTCCHHHHHHHHH
T ss_pred cCCeeeeHHHHhcCCCeEEEEeeecCCCCCCCChhhcCCceEEEEEEECCCcCCHHHHHHHHH
Confidence 478888899999999999999987655 33444 3488899988764
No 65
>1th5_A NIFU1; iron-sulfur cluster binding, structural genomics, program for RICE genome research, unknown function; NMR {Oryza sativa} SCOP: d.52.8.1
Probab=34.67 E-value=18 Score=24.63 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=20.3
Q ss_pred EEEEEecCCChhhH---HHHHHHhh-ccCCceEEE
Q 043962 2 CVLKVELQCCEACP---SKMNKKLL-KIQGVQGIH 32 (200)
Q Consensus 2 v~l~V~GmtC~~Ca---~kIekaL~-kl~GV~~v~ 32 (200)
|.++..|. |.+|. ..||+.|+ +++.|..|.
T Consensus 38 V~v~l~Ga-C~gc~Tlk~gIe~~L~~~vpei~~V~ 71 (74)
T 1th5_A 38 VKVRLTGP-AAVVRTVRIAVSKKLREKIPSIQIVQ 71 (74)
T ss_dssp EEECCCSS-SSSSSSHHHHHHHHHHHHCTTCSEEE
T ss_pred EEEEEecC-CcchHHHHHHHHHHHHHHCCCCcEEE
Confidence 56677886 88884 35666766 567777653
No 66
>3u99_A Diheme cytochrome C; cytochrome C fold, electron transfer protein, electron trans diheme protein, bacterium shewanella baltica OS155; HET: HEC; 1.15A {Shewanella baltica}
Probab=32.01 E-value=7.9 Score=30.06 Aligned_cols=7 Identities=57% Similarity=1.383 Sum_probs=6.4
Q ss_pred cccCCCC
Q 043962 118 CTSCHHP 124 (200)
Q Consensus 118 CasC~~~ 124 (200)
|+||||.
T Consensus 19 CgsCH~A 25 (148)
T 3u99_A 19 CGSCHMA 25 (148)
T ss_dssp HSSSSCC
T ss_pred HHhCCcc
Confidence 9999995
No 67
>3e0m_A Peptide methionine sulfoxide reductase MSRA/MSRB 1; fusion, msrab, linker, hinge, cell membrane, membrane, multifunctional enzyme, oxidoreductase; 2.40A {Streptococcus pneumoniae}
Probab=31.46 E-value=73 Score=27.57 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=35.0
Q ss_pred hhhHHHHHHHhhccCCceEEEEecCCCe-----------------EEEe---ccCCHHHHHHHHH
Q 043962 12 EACPSKMNKKLLKIQGVQGIHIDTEEGL-----------------VIVT---GLLDPAIIMQTIG 56 (200)
Q Consensus 12 ~~Ca~kIekaL~kl~GV~~v~Vnl~~~k-----------------vtV~---~~v~~~~I~~aI~ 56 (200)
.+|=+-+|..+.+++||.++.+-.+.+. |.|+ ..++.++|++..-
T Consensus 9 gGCFWg~E~~F~~l~GV~~t~~GYagG~~~nPtY~~Vc~TGHaEaV~V~yDp~~isy~~LL~~f~ 73 (313)
T 3e0m_A 9 GGCFWGLEEYFSRISGVLETSVGYANGQVETTNYQLLKETDHAETVQVIYDEKEVSLREILLYYF 73 (313)
T ss_dssp CSCHHHHHHHHTTSTTEEEEEEEEESCSSSCCCTTTHHHHTCEEEEEEEECTTTSCHHHHHHHHH
T ss_pred cCCchhhHHHHhhCCCeEEeecccCCCCCCCCChhhhccCCCeEEEEEEECCCcCCHHHHHHHHH
Confidence 4678888999999999999999876554 4454 3488899988663
No 68
>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}
Probab=30.35 E-value=4.5 Score=38.87 Aligned_cols=60 Identities=3% Similarity=-0.250 Sum_probs=23.1
Q ss_pred EeccCCHHHHHHHHHhcCCcEEEcccC------C-ChHHHHHHHHHHHhccccCCcCccccccCCCCCCcccccccceec
Q 043962 42 VTGLLDPAIIMQTIGKLGVEAELLAYE------K-DPKKAKKKLDHFLKGNSKDNKRNLEEIDDHDHDDRGGYEYDARYA 114 (200)
Q Consensus 42 V~~~v~~~~I~~aI~k~Gy~a~~~~~~------~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~s~~~~~pl~~~ 114 (200)
+.+.+....+..+|++.|++....... . .++..+++++.+++||+ .+.+|++|+++.
T Consensus 35 ~~~~~~~~~m~~~V~~~~~G~cp~cgm~l~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~ 98 (736)
T 3rfu_A 35 EGPIVYTCPMHPEIRQSAPGHCPLCGMALEPETVTVSEVVSPEYLDMRRRFW----------------IALMLTIPVVIL 98 (736)
T ss_dssp ---------------------------------------CCHHHHHHHHHHH----------------HHHHHHHHHHHH
T ss_pred CCCceeHHHHHHHHhhcCCCCCcccccchhcccccccchhhHHHHHHHHHHH----------------HHHHHHHHHHHH
Confidence 344566677888888777765543211 1 11123467778888887 588999999999
Q ss_pred CCC
Q 043962 115 MPN 117 (200)
Q Consensus 115 ~m~ 117 (200)
+|.
T Consensus 99 ~~~ 101 (736)
T 3rfu_A 99 EMG 101 (736)
T ss_dssp HHS
T ss_pred HHH
Confidence 887
No 69
>1veh_A NIFU-like protein hirip5; structural genomics, mouse cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: d.52.8.1
Probab=27.98 E-value=29 Score=24.58 Aligned_cols=30 Identities=33% Similarity=0.648 Sum_probs=20.3
Q ss_pred EEEEEecCCChhhHH-------HHHHHhh-ccCCceEEE
Q 043962 2 CVLKVELQCCEACPS-------KMNKKLL-KIQGVQGIH 32 (200)
Q Consensus 2 v~l~V~GmtC~~Ca~-------kIekaL~-kl~GV~~v~ 32 (200)
|.++..|. |.+|.. .||+.|+ .++.|..|.
T Consensus 47 V~v~l~Ga-C~gC~ss~~Tlk~gIE~~L~~~vpev~~V~ 84 (92)
T 1veh_A 47 VRLKLQGS-CTSCPSSIITLKSGIQNMLQFYIPEVEGVE 84 (92)
T ss_dssp EEECCCCC-CCCCHHHHHHTHHHHHHHHHHHCSSCCCEE
T ss_pred EEEEEeec-CCCCCCcHHHHHHHHHHHHHHHCCCCCEEE
Confidence 56677886 999974 4666666 467766553
No 70
>2fi0_A Conserved domain protein; structural genomics,streptococcus pneumoniae, PSI, protein S initiative; 2.10A {Streptococcus pneumoniae} SCOP: a.248.1.1
Probab=26.69 E-value=45 Score=22.59 Aligned_cols=19 Identities=21% Similarity=0.064 Sum_probs=16.7
Q ss_pred cCCHHHHHHHHHhcCCcEE
Q 043962 45 LLDPAIIMQTIGKLGVEAE 63 (200)
Q Consensus 45 ~v~~~~I~~aI~k~Gy~a~ 63 (200)
.++.++|++.|+++||.+.
T Consensus 60 gid~d~l~~~L~~~g~~~~ 78 (81)
T 2fi0_A 60 GTPMDKIVRTLEANGYEVI 78 (81)
T ss_dssp TCCHHHHHHHHHHTTCEEE
T ss_pred CCCHHHHHHHHHHcCCEee
Confidence 3789999999999999874
No 71
>2zxy_A Cytochrome C552, cytochrome C555; heme protein, oxygen binding, transport protein; HET: HEC; 1.15A {Aquifex aeolicus}
Probab=23.14 E-value=21 Score=23.08 Aligned_cols=8 Identities=50% Similarity=1.331 Sum_probs=6.6
Q ss_pred CcccCCCC
Q 043962 117 NCTSCHHP 124 (200)
Q Consensus 117 ~CasC~~~ 124 (200)
.|++||-.
T Consensus 11 ~C~~CHg~ 18 (87)
T 2zxy_A 11 GCGSCHQA 18 (87)
T ss_dssp TGGGTCCS
T ss_pred CchhhcCC
Confidence 59999973
No 72
>3cu4_A Cytochrome C family protein; monoheme cytochrome, electron transport; HET: HEM; 1.30A {Geobacter sulfurreducens}
Probab=22.69 E-value=22 Score=23.17 Aligned_cols=7 Identities=43% Similarity=1.431 Sum_probs=6.1
Q ss_pred CcccCCC
Q 043962 117 NCTSCHH 123 (200)
Q Consensus 117 ~CasC~~ 123 (200)
.|++||-
T Consensus 15 ~Ca~CHg 21 (85)
T 3cu4_A 15 HCAGCHP 21 (85)
T ss_dssp HTTTTSG
T ss_pred HhHHhCC
Confidence 4999997
No 73
>3b47_A GSU0582, methyl-accepting chemotaxis protein; PAS domain, C-type heme containing sensor, unknown function, signaling protein; HET: HEM; 2.00A {Geobacter sulfurreducens}
Probab=22.34 E-value=1.3e+02 Score=22.05 Aligned_cols=24 Identities=13% Similarity=0.077 Sum_probs=15.7
Q ss_pred HHHHHhhccCCceEEEEecCCCeE
Q 043962 17 KMNKKLLKIQGVQGIHIDTEEGLV 40 (200)
Q Consensus 17 kIekaL~kl~GV~~v~Vnl~~~kv 40 (200)
.+-+.+.+.+||.++.|=-..+++
T Consensus 36 ~~i~~i~~~~~I~~irI~~~~g~i 59 (134)
T 3b47_A 36 RYVADVRGKGAVLDLRIYDAAGRP 59 (134)
T ss_dssp HHHHHHTTCCCEEEEEEEETTSCB
T ss_pred HHHHHHhccCCceEEEEECCCCcE
Confidence 344446677888888776666644
No 74
>2jmk_A Hypothetical protein TA0956; protein binding; NMR {Thermoplasma acidophilum} PDB: 2k24_A
Probab=21.73 E-value=1.6e+02 Score=21.14 Aligned_cols=37 Identities=14% Similarity=0.110 Sum_probs=26.8
Q ss_pred ceEEEEecCCCeEEEec-cC------CHHHHHHHHHhcCCcEEE
Q 043962 28 VQGIHIDTEEGLVIVTG-LL------DPAIIMQTIGKLGVEAEL 64 (200)
Q Consensus 28 V~~v~Vnl~~~kvtV~~-~v------~~~~I~~aI~k~Gy~a~~ 64 (200)
|.-+-+|...+-+.|.. ++ ..++|++..++.||+++.
T Consensus 66 vGFvviN~dKK~mSvsFsd~~~~~K~~i~ei~kkykd~GykvE~ 109 (111)
T 2jmk_A 66 VGFVVVNADKKLMSVSFSDIDENMKKVIKATAEKFKNKGFKVET 109 (111)
T ss_dssp EEEEEEETTTTEEEEEECSCCTTHHHHHHHHHHHGGGGCCEEEE
T ss_pred eEEEEEecCCeEEEEEeehhhhhHHHHHHHHHHHhhcCCceeec
Confidence 66788898888888863 22 235666667789998875
No 75
>2exv_A Cytochrome C-551; alpha helix, heme C, electron transport; HET: HEC; 1.86A {Pseudomonas aeruginosa} PDB: 2pac_A* 351c_A* 451c_A* 1dvv_A*
Probab=21.28 E-value=24 Score=22.73 Aligned_cols=8 Identities=38% Similarity=1.128 Sum_probs=6.6
Q ss_pred CcccCCCC
Q 043962 117 NCTSCHHP 124 (200)
Q Consensus 117 ~CasC~~~ 124 (200)
.|++||-.
T Consensus 11 ~C~~CHg~ 18 (82)
T 2exv_A 11 GCVACHAI 18 (82)
T ss_dssp TGGGTCCS
T ss_pred CchhhcCC
Confidence 59999973
No 76
>1ayg_A Cytochrome C-552; electron transport, porphyrin, ferrous iron; HET: HEC; NMR {Hydrogenobacter thermophilus} SCOP: a.3.1.1 PDB: 1ynr_A* 2ai5_A*
Probab=21.23 E-value=25 Score=22.70 Aligned_cols=10 Identities=30% Similarity=0.879 Sum_probs=7.6
Q ss_pred CCCcccCCCC
Q 043962 115 MPNCTSCHHP 124 (200)
Q Consensus 115 ~m~CasC~~~ 124 (200)
.-.|++||-.
T Consensus 7 ~~~C~~CHg~ 16 (80)
T 1ayg_A 7 QKGCMACHDL 16 (80)
T ss_dssp SSSSGGGCCS
T ss_pred hCCchhhcCC
Confidence 3469999973
No 77
>2d0s_A Cytochrome C, cytochrome C552; heme protein, electron transport; HET: HEC; 2.20A {Hydrogenophilus thermoluteolus}
Probab=21.18 E-value=24 Score=22.71 Aligned_cols=9 Identities=33% Similarity=0.958 Sum_probs=7.1
Q ss_pred CCcccCCCC
Q 043962 116 PNCTSCHHP 124 (200)
Q Consensus 116 m~CasC~~~ 124 (200)
-.|++||-.
T Consensus 8 ~~C~~CHg~ 16 (79)
T 2d0s_A 8 KGCMACHAI 16 (79)
T ss_dssp TTGGGTCCS
T ss_pred CCChhhcCC
Confidence 459999973
No 78
>2ce0_A Cytochrome C6; chloroplast, electron transport, heme, iron, thylakoid, photosynthesis, metal-binding, electron transfer; HET: HEC; 1.24A {Arabidopsis thaliana} PDB: 2ce1_A* 2dge_A* 2v07_A*
Probab=20.73 E-value=26 Score=23.68 Aligned_cols=7 Identities=43% Similarity=1.464 Sum_probs=6.1
Q ss_pred CcccCCC
Q 043962 117 NCTSCHH 123 (200)
Q Consensus 117 ~CasC~~ 123 (200)
.|++||-
T Consensus 15 ~Ca~CHg 21 (105)
T 2ce0_A 15 ACAACHD 21 (105)
T ss_dssp HTTTTSG
T ss_pred HHHHhCC
Confidence 3999997
No 79
>1kx2_A Mono-heme C-type cytochrome SCYA; HAEM protein, ferrocytochrome, electron transport, GRAM negative, bacteria; HET: HEC; NMR {Shewanella putrefaciens} SCOP: a.3.1.1 PDB: 1kx7_A*
Probab=20.53 E-value=27 Score=22.88 Aligned_cols=8 Identities=50% Similarity=1.148 Sum_probs=6.7
Q ss_pred CcccCCCC
Q 043962 117 NCTSCHHP 124 (200)
Q Consensus 117 ~CasC~~~ 124 (200)
.|++||..
T Consensus 13 ~Ca~CHg~ 20 (81)
T 1kx2_A 13 ACTVCHSM 20 (81)
T ss_dssp STTSSTTT
T ss_pred HHHHHcCC
Confidence 59999974
No 80
>1c53_A Cytochrome C553; electron transport; HET: HEM; 1.80A {Desulfovibrio vulgaris str} SCOP: a.3.1.1 PDB: 1dvh_A* 1dwl_B* 1e08_E* 2dvh_A*
Probab=20.46 E-value=20 Score=23.20 Aligned_cols=7 Identities=43% Similarity=1.345 Sum_probs=6.1
Q ss_pred cccCCCC
Q 043962 118 CTSCHHP 124 (200)
Q Consensus 118 CasC~~~ 124 (200)
|++||-.
T Consensus 10 Ca~CHg~ 16 (79)
T 1c53_A 10 CVGCHGA 16 (79)
T ss_pred HHhccCC
Confidence 9999983
Done!