BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043963
(315 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7XJK8|PHE2_ARATH MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana
GN=PHE2 PE=1 SV=1
Length = 278
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 113/271 (41%), Gaps = 44/271 (16%)
Query: 3 RGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVDVE 62
+ K+ L LI+ +R T+ KRK+G+ KK E TLCGV C ++Y P NS P E
Sbjct: 2 KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSP-FNSIP-----E 55
Query: 63 VWPKDH------KEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKAN 116
WP +FM++ L R K F + R K E++ K+R N
Sbjct: 56 AWPSREGVEDVVSKFMELSVLDRTKKMVDQET--------FISQRIAKEKEQLQKLRDEN 107
Query: 117 FESKFSSDL------DEDFNNFSMHQLKGMLVVLDNNIDVATRKLALIKGHHQNFGCYND 170
S+ + + + N L+ + + +D ++ TR++ ++ + ++
Sbjct: 108 HNSQIRELMFGCLKGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPL 167
Query: 171 NNNANNSAQVLFQQPQPLASHHVNMQ---------LASYHHHEPIQMVSFDFNPVDNPTM 221
AN +A V F P H+ N Q L ++ P ++ F+ N +
Sbjct: 168 PIVANAAAPVGFDGPM-FQYHNQNQQKPVQFQYQALYDFYDQIPKKIHGFNMNMNKDSNQ 226
Query: 222 MMML-----MNGGDQIQLGCNTTALYNHHHP 247
M+L +N G+ + C N++HP
Sbjct: 227 SMVLDLNQNLNDGEDEGIPCMDN---NNYHP 254
>sp|Q38840|AGL17_ARATH Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana
GN=AGL17 PE=2 SV=2
Length = 227
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYG 49
MGRGK+ ++ ID +R +T+ KR++GL KKA+E A LC C+II+
Sbjct: 1 MGRGKIVIQKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFS 49
>sp|Q9C6V3|AGL86_ARATH Agamous-like MADS-box protein AGL86 OS=Arabidopsis thaliana
GN=AGL86 PE=1 SV=1
Length = 339
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 3 RGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVDVE 62
R K+ L LI + +R T++KRK G+ K E TLCGV C +I P N
Sbjct: 2 RSKIKLSLIANKTSRRTTFRKRKGGITNKLHELTTLCGVKACAVISSPYENP-------V 54
Query: 63 VWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKANFESKF 121
VWP + + V+++ ++ T + + + D+ K +K+ +R+ N ES+
Sbjct: 55 VWPST-EGVQEAVSMFMERPATEQSKLMMSH-ETYLQDKITKETKKLESLRRENRESQL 111
>sp|O80805|PHE1_ARATH MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana
GN=PHE1 PE=1 SV=1
Length = 279
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 52/125 (41%), Gaps = 20/125 (16%)
Query: 3 RGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVDVE 62
RGK+ L I+ + R T+ KRK+G+ KK E TLCGV C +I P + E
Sbjct: 2 RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQ------E 55
Query: 63 VWPKDH------KEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKAN 116
WP +FM+ L R K F R K E++ K+R N
Sbjct: 56 PWPSREGVEEVMSKFMEFSVLDRTKKMVDQET--------FLRQRIAKETERLQKLRDEN 107
Query: 117 FESKF 121
S+
Sbjct: 108 RNSQI 112
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
MGRGK+ ++ ID +R +T+ KR++GL KKA+E A LC +II+
Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSS 50
>sp|Q9C6V4|AGL92_ARATH Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana
GN=AGL92 PE=1 SV=1
Length = 464
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 21/125 (16%)
Query: 3 RGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVDVE 62
R K L LI R T++KR G++KK E TLC + C +IY P N
Sbjct: 2 RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENP-------T 54
Query: 63 VWPKDH------KEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKAN 116
VWP EFM+ R K S F D+ K K+ +R+ N
Sbjct: 55 VWPSTEGVQEVISEFMEKPATERSKTMMSHE--------TFLRDQITKEQNKLESLRREN 106
Query: 117 FESKF 121
E++
Sbjct: 107 RETQL 111
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
MGRGK+ +K I+ +R +T+ KR+ GL KKA+E A LC +II+
Sbjct: 1 MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSS 50
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRGK+ LK I+ + +R +T+ KR+ GL KKA E + LC +II+ R S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 VEVWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKANFESK 120
++ + + YR + S +N + N + Y K+ K R ++
Sbjct: 61 SCMY--------KTLERYRSCNYNSQDAAAPEN------EINYQEYLKL-KTRVEFLQTT 105
Query: 121 FSSDLDEDFNNFSMHQLKGMLVVLDNNIDVATRKL 155
+ L ED SM +L+ L+N I+V+ +++
Sbjct: 106 QRNILGEDLGPLSMKELE----QLENQIEVSLKQI 136
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 19/155 (12%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRGK+ LK I+ + +R +T+ KR+ GL KKA E + LC +II+ R S
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSS 60
Query: 61 VEVWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKANFESK 120
++ + + YR + S +N + N + Y K+ K R ++
Sbjct: 61 SCMY--------KTLERYRSCNYNSQDAAAPEN------EINYQEYLKL-KTRVEFLQTT 105
Query: 121 FSSDLDEDFNNFSMHQLKGMLVVLDNNIDVATRKL 155
+ L ED SM +L+ L+N I+V+ +++
Sbjct: 106 QRNILGEDLGPLSMKELE----QLENQIEVSLKQI 136
>sp|Q07474|MADS2_PETHY Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2
SV=1
Length = 212
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYG 49
MGRGK+ +K I+ R +TY KR+ G+ KKA+E LC +II+G
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFG 49
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ LK I+ + +R +T+ KR+ GL KKA E + LC +II+ R
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTR 51
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ LK I+ + +R +T+ KR+ GL KKA E + LC +II+ R
Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTR 51
>sp|Q7XJK5|AGL90_ARATH Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana
GN=AGL90 PE=1 SV=2
Length = 320
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 5 KLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
K+ L LI E++R ++ KRK G+ KK E +TLCGV C +IY P
Sbjct: 3 KVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSP 48
>sp|Q03378|GLOB_ANTMA Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1
SV=1
Length = 215
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSH----P 56
MGRGK+ +K I+ R +TY KR+ G+ KKA+E + LC +II+ H P
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSP 60
Query: 57 GSVDVEVWPKDHK 69
+ V++ HK
Sbjct: 61 STTLVDMLDHYHK 73
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ +K I+ + +R +T+ KR+ GL KKA E A LC +I++ R
Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSR 51
>sp|Q2QQA3|MAD20_ORYSJ MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica
GN=MADS20 PE=2 SV=2
Length = 233
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLN 53
MGRGK+ ++ I+ E +R +T+ KR+ GL KKA E A LC V I++ + N
Sbjct: 1 MGRGKVQVRRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGN 53
>sp|Q38876|AGL8_ARATH Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8
PE=1 SV=1
Length = 242
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRG++ LK I+ + R +T+ KR+ GL KKA E + LC +I++ + S D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTD 60
Query: 61 --VEVWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKANFE 118
+E + + + LY DK +S+N A +V ++++ K NF
Sbjct: 61 SCMERILERYDRY-----LYSDKQLVGRDVSQSENWVLEHAKLKARV--EVLEKNKRNF- 112
Query: 119 SKFSSDLDEDFNNFSMHQLKGMLVVLDNNI-DVATRK 154
+ ED ++ S+ +L+ + LD I + +RK
Sbjct: 113 ------MGEDLDSLSLKELQSLEHQLDAAIKSIRSRK 143
>sp|Q07472|MADS1_PETHY Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2
SV=1
Length = 231
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 21/168 (12%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
M RGK+ +K I+ + R +TY KR+ GL KKA E LC +I+ S G +
Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMI-----SSTGKLH 55
Query: 61 VEVWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKA--NFE 118
+ P + Q+ +LY+ GV D + K+ E++ K+++ N
Sbjct: 56 EFISPSITTK--QLFDLYQKTV-----GV------DLWNSHYEKMQEQLRKLKEVNRNLR 102
Query: 119 SKFSSDLDEDFNNFSMHQLKGMLVVLDNNID-VATRKLALIKGHHQNF 165
+ + E N+ + QL+ ++ +DN++ + RK +I + F
Sbjct: 103 KEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKVIGNQIETF 150
>sp|Q03488|FBP1_PETHY Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1
Length = 210
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRGK+ +K I+ R +TY KR+ G+ KKA+E + LC +II+ H S
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSST 60
Query: 61 --VEVWPKDHK 69
V++ + HK
Sbjct: 61 SLVDILDQYHK 71
>sp|Q944S9|MAD16_ORYSJ MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica
GN=MADS16 PE=1 SV=2
Length = 224
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRGK+ +K I+ R +TY KR+ G+ KKA+E LC +I++ H
Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHE---- 56
Query: 61 VEVWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFA---DRNRKVYEKIVKIRKANF 117
+ + + + Y+ TS+ + +N+ + D NR N
Sbjct: 57 ---FCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINR------------NL 101
Query: 118 ESKFSSDLDEDFNNFSMHQLKGMLVVLDNNIDVATRKLALIKGH 161
++ + ED + +L+G L+ N+D A +++ K H
Sbjct: 102 RTEIRQRMGEDLDGLEFDELRG----LEQNVDAALKEVRHRKYH 141
>sp|Q7XJK6|AGL36_ARATH Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana
GN=AGL36 PE=1 SV=1
Length = 366
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 5 KLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
K+ L LI E++R ++ KRK G+ KK E +TLCGV C +IY P
Sbjct: 3 KVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSP 48
>sp|Q03416|GLOB_TOBAC Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2
SV=1
Length = 209
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
MGRGK+ +K I+ R +TY KR+ G+ KKA+E + LC +II+
Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFAS 50
>sp|Q9SI38|ANR1_ARATH MADS-box transcription factor ANR1 OS=Arabidopsis thaliana
GN=ANR1 PE=1 SV=1
Length = 234
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
MGRGK+ ++ ID +R +T+ KR+ GL KKA+E + LC +II+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRSGLLKKAKELSILCDAEVGVIIFSS 50
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSV 59
MGRG++ LK I+ + R +T+ KR+ GL KKAQE + LC +I++ SH G +
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVF-----SHKGKL 54
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana
GN=AGL6 PE=1 SV=2
Length = 252
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHP-GSV 59
MGRG++ +K I+ + R +T+ KR+ GL KKA E + LC +II+ R + GSV
Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSV 60
Query: 60 DVE 62
+E
Sbjct: 61 GIE 63
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSV 59
MGRG++ LK I+ + R +T+ KR+ GL KKAQE + LC +I++ SH G +
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAQEISVLCDAEVSLIVF-----SHKGKL 54
>sp|Q41274|AGL8_SINAL Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8
PE=2 SV=1
Length = 241
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 16/142 (11%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRG++ LK I+ + R +T+ KR+ GL KKA E + LC ++I+ + S D
Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTD 60
Query: 61 --VEVWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYEKIVKIRKANFE 118
+E + + + LY DK +S+N A +V ++++ K NF
Sbjct: 61 SCMEKILERYDRY-----LYSDKQLVGRDISQSENWVLEHAKLKARV--EVLEKNKRNF- 112
Query: 119 SKFSSDLDEDFNNFSMHQLKGM 140
+ ED ++ S+ +L+ +
Sbjct: 113 ------MGEDLDSLSLKELQSL 128
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
MGRGK+ +K ID +R +T+ KR+ GL KKA+E + LC ++++
Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSS 50
>sp|Q9FUY6|JOIN_SOLLC MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1
Length = 265
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYG 49
M R K+ +K ID AR +T+ KR+RGL KKA+E + LC +II+
Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFS 49
>sp|Q55F37|SRFC_DICDI Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3
SV=1
Length = 1050
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIY 48
MGR K+T++ I E+ R T+ KRK GL KKA E + LC MI++
Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVF 50
>sp|Q38847|AGL15_ARATH Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana
GN=AGL15 PE=1 SV=1
Length = 268
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYG 49
MGRGK+ +K I+ +R +T+ KR+ GL KKA+E + LC +I++
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFS 49
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIY 48
MGRGK+ ++ ID +R +T+ KR+ GL KKA+E + LC ++++
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVF 48
>sp|Q0J466|MADS7_ORYSJ MADS-box transcription factor 7 OS=Oryza sativa subsp. japonica
GN=MADS7 PE=1 SV=2
Length = 249
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRG++ LK I+ + R +T+ KR+ GL KKA E + LC +II+ R +
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC-- 58
Query: 61 VEVWPKDHKEFMQVVNLYRDKAF----TSVHGVKSQNLYDFFADRNRKVYEKIVKIRKAN 116
+ + + Y+ ++ T+V +S+ L A RN Y K+ K R N
Sbjct: 59 ------STQSMTKTLEKYQKCSYAGPETAVQNRESEQLK---ASRNE--YLKL-KARVEN 106
Query: 117 FESKFSSDLDEDFNNFSMHQLKGMLVVLDNNI 148
+ + L ED ++ + +L+ + LD+++
Sbjct: 107 LQRTQRNLLGEDLDSLGIKELESLEKQLDSSL 138
>sp|P0C5B0|MADS7_ORYSI MADS-box transcription factor 7 OS=Oryza sativa subsp. indica
GN=MADS7 PE=2 SV=2
Length = 249
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRG++ LK I+ + R +T+ KR+ GL KKA E + LC +II+ R +
Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFC-- 58
Query: 61 VEVWPKDHKEFMQVVNLYRDKAF----TSVHGVKSQNLYDFFADRNRKVYEKIVKIRKAN 116
+ + + Y+ ++ T+V +S+ L A RN Y K+ K R N
Sbjct: 59 ------STQSMTKTLEKYQKCSYAGPETAVQNRESEQLK---ASRNE--YLKL-KARVEN 106
Query: 117 FESKFSSDLDEDFNNFSMHQLKGMLVVLDNNI 148
+ + L ED ++ + +L+ + LD+++
Sbjct: 107 LQRTQRNLLGEDLDSLGIKELESLEKQLDSSL 138
>sp|Q84NC5|MAD25_ORYSJ MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica
GN=MADS25 PE=2 SV=2
Length = 227
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYG 49
MGRGK+ +K ID R +T+ KR+ GL KKA+E A LC +I++
Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFS 49
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ +K I+ R +T+ KR+ GL KKA E + LC +I++ R
Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 51
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYG 49
MGRGK+ ++ ID +R +T+ KR+ G+ KKA+E A LC ++I+
Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFS 49
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRG++ +K I+ +R +T+ KR+ GL KKA E + LC +I++ R
Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSR 51
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ +K I+ R +T+ KR+ GL KKA E + LC +I++ R
Sbjct: 1 MGRGKIEIKRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTR 51
>sp|P48007|PIST_ARATH Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana GN=PI
PE=1 SV=1
Length = 208
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
MGRGK+ +K I+ R++T+ KR+ GL KKA+E LC +II+
Sbjct: 1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFAS 50
>sp|Q6Q9I2|MAD15_ORYSJ MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica
GN=MADS15 PE=1 SV=2
Length = 267
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ LK I+ + R +T+ KR+ GL KKA E + LC I++ P+
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPK 51
>sp|Q9FVC1|SVP_ARATH MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1
Length = 240
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
M R K+ ++ ID AR +T+ KR+RGL KKA+E + LC +II+
Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSS 50
>sp|Q4PSU4|AGL61_ARATH Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana
GN=AGL61 PE=1 SV=1
Length = 264
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGP 50
+GR K+ + I KE R +T+ KR+ GL KKA E TLCG +I++ P
Sbjct: 62 IGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSP 111
>sp|P29383|AGL3_ARATH Agamous-like MADS-box protein AGL3 OS=Arabidopsis thaliana
GN=AGL3 PE=2 SV=2
Length = 258
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ LK I+ + R +T+ KR+ GL KKA E + LC ++I+ R
Sbjct: 1 MGRGKVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALLIFSNR 51
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRG++ LK I+ + R +T+ KR+ GL KKA E + LC +II+ R
Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSR 51
>sp|Q38838|AGL14_ARATH Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana
GN=AGL14 PE=1 SV=2
Length = 221
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
M RGK +K I+ +R +T+ KR+ GL KKA E + LC +II+ PR
Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPR 51
>sp|Q9ATE5|FBP24_PETHY MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1
Length = 268
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ +K I+ + +R +T+ KR+ GL KK E + LC +II+ +
Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSK 54
>sp|Q8RYD9|TT16_ARATH Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1
SV=1
Length = 252
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 83/180 (46%), Gaps = 22/180 (12%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPRLNSHPGSVD 60
MGRGK+ +K I+ + AR +T+ KR+ GL KK +E + LC +I++ +
Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFS-------ATGK 53
Query: 61 VEVWPKDHKEFMQVVNLYRDKAFTSVHGVKSQNLYDFFADRNRKVYE-KIVKIRKANFES 119
+ + + Q+++ Y +G++ L D D+ + +E ++++ N E
Sbjct: 54 LSEFCSEQNRMPQLIDRY-----LHTNGLR---LPDHHDDQEQLHHEMELLRRETCNLEL 105
Query: 120 KFSSDLDEDFNNFSMHQLKGMLVVLDNNI-DVATRKLALIKGHHQNFG-----CYNDNNN 173
+ D + ++L G+ L++++ V RK L++ +N DNNN
Sbjct: 106 RLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDNNN 165
>sp|Q10CQ1|MAD14_ORYSJ MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica
GN=MADS14 PE=1 SV=2
Length = 246
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYGPR 51
MGRGK+ LK I+ + R +T+ KR+ GL KKA E + LC +II+ +
Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTK 51
>sp|Q39295|AGL15_BRANA Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15
PE=3 SV=1
Length = 264
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 1 MGRGKLTLKLIDKEKARMITYQKRKRGLKKKAQEFATLCGVPTCMIIYG 49
MGRGK+ +K I+ +R +T+ KR+ GL KKA E + LC +I++
Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFS 49
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 117,927,399
Number of Sequences: 539616
Number of extensions: 4872291
Number of successful extensions: 15098
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 14849
Number of HSP's gapped (non-prelim): 282
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)