BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043969
(300 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302143887|emb|CBI22748.3| unnamed protein product [Vitis vinifera]
Length = 518
Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/300 (82%), Positives = 271/300 (90%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE GFP TARTF ILICTCGE GLAR+ VERF+KSK FN+RPFK+SYNAILH LL ++Q
Sbjct: 219 MIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQ 278
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKL+EWVYQQM E Y+PDILTYNIVMC KYRLGKLDQFHRLL+E+G +GFSPDFHT+NI
Sbjct: 279 YKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNI 338
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH+LGKG+KPLAAL+LLNHMKEVGFDPSVLHFTTL+DGLSRAGNLDACKYFFDEM G
Sbjct: 339 LLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLG 398
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
CMPDVVCYTVMIT YI AGELE AQ LF+ M KGQLPNVFTYNSMIRG CMA KF+EA
Sbjct: 399 CMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEAR 458
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+M+KEMESRGCNPNFLVYNTLV NLRNAGKL EAHEVIRHMV+KG+Y+HL+SKFK Y+RC
Sbjct: 459 SMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 518
>gi|225470179|ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Vitis vinifera]
Length = 514
Score = 526 bits (1354), Expect = e-147, Method: Compositional matrix adjust.
Identities = 246/300 (82%), Positives = 271/300 (90%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE GFP TARTF ILICTCGE GLAR+ VERF+KSK FN+RPFK+SYNAILH LL ++Q
Sbjct: 215 MIEQGFPVTARTFQILICTCGEAGLARRAVERFVKSKNFNYRPFKHSYNAILHCLLCLKQ 274
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKL+EWVYQQM E Y+PDILTYNIVMC KYRLGKLDQFHRLL+E+G +GFSPDFHT+NI
Sbjct: 275 YKLVEWVYQQMLLEDYSPDILTYNIVMCTKYRLGKLDQFHRLLEELGTNGFSPDFHTFNI 334
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH+LGKG+KPLAAL+LLNHMKEVGFDPSVLHFTTL+DGLSRAGNLDACKYFFDEM G
Sbjct: 335 LLHLLGKGNKPLAALDLLNHMKEVGFDPSVLHFTTLIDGLSRAGNLDACKYFFDEMIKLG 394
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
CMPDVVCYTVMIT YI AGELE AQ LF+ M KGQLPNVFTYNSMIRG CMA KF+EA
Sbjct: 395 CMPDVVCYTVMITGYIVAGELEMAQGLFEEMTVKGQLPNVFTYNSMIRGLCMAEKFEEAR 454
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+M+KEMESRGCNPNFLVYNTLV NLRNAGKL EAHEVIRHMV+KG+Y+HL+SKFK Y+RC
Sbjct: 455 SMLKEMESRGCNPNFLVYNTLVGNLRNAGKLKEAHEVIRHMVDKGQYVHLLSKFKGYRRC 514
>gi|255539453|ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549906|gb|EEF51393.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 475
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 235/289 (81%), Positives = 259/289 (89%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ENGFPTTARTFNILICTCG GLARKVVERFIKSK FN+RPFK+SYNAIL +LL IR+
Sbjct: 180 MVENGFPTTARTFNILICTCGGAGLARKVVERFIKSKTFNYRPFKHSYNAILLSLLAIRE 239
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLIEWV+QQM EGY PD LTYNI+MCAKYRLGKL FHRLLDEMGRSGFSPDFHTYNI
Sbjct: 240 YKLIEWVHQQMLVEGYCPDTLTYNILMCAKYRLGKLHHFHRLLDEMGRSGFSPDFHTYNI 299
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKG+KP+AAL LLNHMKE+GFDPS+LHFTTL+DGLSRAGNLDAC YFFDEM G
Sbjct: 300 LLHVLGKGNKPIAALKLLNHMKEIGFDPSILHFTTLIDGLSRAGNLDACNYFFDEMIKNG 359
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PDVVCYTVMIT YI AGELEKA+++FD MI +GQLPNVFTYNSMIRG CMAGKF+EA
Sbjct: 360 FVPDVVCYTVMITGYIVAGELEKAREIFDEMIARGQLPNVFTYNSMIRGLCMAGKFEEAR 419
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
M+KEM SRGC PNFLVYNTLV+NLRNAGKL+EA EVI+ M E G+Y+H
Sbjct: 420 CMLKEMGSRGCKPNFLVYNTLVNNLRNAGKLSEAREVIKEMAENGQYVH 468
>gi|449446161|ref|XP_004140840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/300 (75%), Positives = 261/300 (87%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G+P TARTF ILICTCGE GLA++VVERFIKSK FNFRP+K+SYNAILH L+ ++Q
Sbjct: 177 MTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQ 236
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLI WVY QM + ++PDILTYN+++ + +LGKLDQFHRLLDEM R GFSPDFHTYNI
Sbjct: 237 YKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNI 296
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL+VLGKGDKPLAALNLLNHM+EVGF P+VLHFTTL++GLSRAGNLDACKYFFDE+ N G
Sbjct: 297 LLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNG 356
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PDVVCYTVMITS+ AG+ EKA+ FD MI KGQLPNVFTYNSMIRGFCM GKF EA
Sbjct: 357 CIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAY 416
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+M+ EMESRGC PNFLVY+TLVS LRNAGKL EAH+VI+ MVE G+Y HL++KFK Y+RC
Sbjct: 417 SMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKQMVENGQYAHLMTKFKGYRRC 476
>gi|449485620|ref|XP_004157226.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Cucumis sativus]
Length = 476
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 226/300 (75%), Positives = 261/300 (87%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G+P TARTF ILICTCGE GLA++VVERFIKSK FNFRP+K+SYNAILH L+ ++Q
Sbjct: 177 MTEKGYPVTARTFMILICTCGEAGLAKRVVERFIKSKTFNFRPYKHSYNAILHGLVIVKQ 236
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLI WVY QM + ++PDILTYN+++ + +LGKLDQFHRLLDEM R GFSPDFHTYNI
Sbjct: 237 YKLIGWVYDQMLLDDHSPDILTYNVLLFSSCKLGKLDQFHRLLDEMARKGFSPDFHTYNI 296
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL+VLGKGDKPLAALNLLNHM+EVGF P+VLHFTTL++GLSRAGNLDACKYFFDE+ N G
Sbjct: 297 LLYVLGKGDKPLAALNLLNHMREVGFGPNVLHFTTLINGLSRAGNLDACKYFFDELGNNG 356
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PDVVCYTVMITS+ AG+ EKA+ FD MI KGQLPNVFTYNSMIRGFCM GKF EA
Sbjct: 357 CIPDVVCYTVMITSFTEAGQHEKARAFFDEMIMKGQLPNVFTYNSMIRGFCMVGKFKEAY 416
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+M+ EMESRGC PNFLVY+TLVS LRNAGKL EAH+VI+ MVE G+Y HL++KFK Y+RC
Sbjct: 417 SMLSEMESRGCRPNFLVYSTLVSYLRNAGKLGEAHKVIKRMVENGQYAHLMTKFKGYRRC 476
>gi|297853270|ref|XP_002894516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340358|gb|EFH70775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 477
Score = 482 bits (1241), Expect = e-134, Method: Compositional matrix adjust.
Identities = 217/299 (72%), Positives = 264/299 (88%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI++G+PTTA TFN+LICTCGE GLAR VVE+FIKSK FN+RP+K+SYNAILH+LLG++Q
Sbjct: 178 MIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQ 237
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLI+WVY+QM ++G++PD+LTYNIVM A +RLGK D+ +RLLDEM + GFSPD +TYNI
Sbjct: 238 YKLIDWVYEQMLEDGFSPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNI 297
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH L G+KPLAALNLL HM+EVG +P V+HFTTL+DGLSRAG L+ACKYF DEM G
Sbjct: 298 LLHHLATGNKPLAALNLLTHMREVGVEPGVIHFTTLVDGLSRAGKLEACKYFMDEMVKVG 357
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT YI+ GELEKA+++F M KGQLPNVFTYNSMIRGFCMAGKF EAC
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEAC 417
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
+++KEMESRGCNPNF+VY+TLV+NLRNAGK+ EAHE+++ MVEKG Y+HL+S FK+Y+R
Sbjct: 418 SLLKEMESRGCNPNFVVYSTLVNNLRNAGKVLEAHEIVKDMVEKGHYVHLISMFKKYRR 476
>gi|15222753|ref|NP_175959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75140283|sp|Q7X6A5.1|PPR81_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g55630
gi|30793841|gb|AAP40373.1| unknown protein [Arabidopsis thaliana]
gi|30794021|gb|AAP40457.1| unknown protein [Arabidopsis thaliana]
gi|110739296|dbj|BAF01561.1| hypothetical protein [Arabidopsis thaliana]
gi|332195155|gb|AEE33276.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 477
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 217/299 (72%), Positives = 262/299 (87%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI++G+PTTA TFN+LICTCGE GLAR VVE+FIKSK FN+RP+K+SYNAILH+LLG++Q
Sbjct: 178 MIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQ 237
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLI+WVY+QM ++G+ PD+LTYNIVM A +RLGK D+ +RLLDEM + GFSPD +TYNI
Sbjct: 238 YKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNI 297
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH L G+KPLAALNLLNHM+EVG +P V+HFTTL+DGLSRAG L+ACKYF DE G
Sbjct: 298 LLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG 357
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT YI+ GELEKA+++F M KGQLPNVFTYNSMIRGFCMAGKF EAC
Sbjct: 358 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEAC 417
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
++KEMESRGCNPNF+VY+TLV+NL+NAGK+ EAHEV++ MVEKG Y+HL+SK K+Y+R
Sbjct: 418 ALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 476
>gi|8778500|gb|AAF79508.1|AC002328_16 F20N2.6 [Arabidopsis thaliana]
Length = 554
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 217/299 (72%), Positives = 262/299 (87%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI++G+PTTA TFN+LICTCGE GLAR VVE+FIKSK FN+RP+K+SYNAILH+LLG++Q
Sbjct: 255 MIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQ 314
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLI+WVY+QM ++G+ PD+LTYNIVM A +RLGK D+ +RLLDEM + GFSPD +TYNI
Sbjct: 315 YKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNI 374
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH L G+KPLAALNLLNHM+EVG +P V+HFTTL+DGLSRAG L+ACKYF DE G
Sbjct: 375 LLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVG 434
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT YI+ GELEKA+++F M KGQLPNVFTYNSMIRGFCMAGKF EAC
Sbjct: 435 CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEAC 494
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
++KEMESRGCNPNF+VY+TLV+NL+NAGK+ EAHEV++ MVEKG Y+HL+SK K+Y+R
Sbjct: 495 ALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKKYRR 553
>gi|356534139|ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Glycine max]
Length = 480
Score = 479 bits (1234), Expect = e-133, Method: Compositional matrix adjust.
Identities = 223/298 (74%), Positives = 260/298 (87%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G P TARTFNILI TCGE GLA+ +VERFIKSK FNFRPFK+SYNAILH LL + Q
Sbjct: 182 MVEKGLPATARTFNILIRTCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQ 241
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLIEWVYQQ+ +G++ DILTYNIVM AKYRLGKLDQFHRLLDEMGR+GFSPDFHT+NI
Sbjct: 242 YKLIEWVYQQLLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNI 301
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKGDKPLAALNLLNHM+E+G +P+VLHFTTL+DGLSRAGNLDACKYFFDEM G
Sbjct: 302 LLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNG 361
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PDVV YTVMIT Y+ AGE+EKA ++ MI++ Q+PNVFTYNS+I+G CMAGKFDEAC
Sbjct: 362 CIPDVVAYTVMITGYVVAGEIEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEAC 421
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYK 298
+M+KEM+++GC+PN VYNTL S LRNAGK A+AHEVIR M EKGKY + S+F+ +K
Sbjct: 422 SMLKEMKTKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQMTEKGKYADIHSRFRGHK 479
>gi|356575965|ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 1 [Glycine max]
gi|356575967|ref|XP_003556107.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like isoform 2 [Glycine max]
Length = 480
Score = 479 bits (1232), Expect = e-133, Method: Compositional matrix adjust.
Identities = 225/298 (75%), Positives = 258/298 (86%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G P TARTFNILI TCGE GLA+ +VERFIKSK FNFRPFK+SYNAILH LL + Q
Sbjct: 182 MIEKGLPATARTFNILIRTCGEAGLAKNLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQ 241
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLIEWVYQQM +G+ DILTYNIVM AKYRLGKLDQFHRLLDEMGR+GFSPDFHT+NI
Sbjct: 242 YKLIEWVYQQMLLDGFPSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNI 301
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKGDKPLAALNLLNHM+E+G +P+VLHFTTL+DGLSRAGNLDACKYFFDEM
Sbjct: 302 LLHVLGKGDKPLAALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNE 361
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVV YTVMIT Y+ AGE+EKA +++ MI++ Q+PNVFTYNS+IRG CMAGKFDEAC
Sbjct: 362 CRPDVVAYTVMITGYVVAGEIEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEAC 421
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYK 298
+M+KEME++GC+PN +VYNTL S LRNAGK A+AHEVIR M EK K+ + S+FK +K
Sbjct: 422 SMLKEMETKGCSPNSVVYNTLASCLRNAGKTADAHEVIRQMTEKVKHADIHSRFKGHK 479
>gi|15232243|ref|NP_191564.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181813|sp|Q9M1D8.1|PP288_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g60050
gi|7076758|emb|CAB75920.1| putative protein [Arabidopsis thaliana]
gi|332646485|gb|AEE80006.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 473
Score = 476 bits (1224), Expect = e-132, Method: Compositional matrix adjust.
Identities = 213/299 (71%), Positives = 261/299 (87%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++GFPTTARTFN+LIC+CGE GLA++ V +F+KSK FN+RPFK+SYNAIL++LLG++Q
Sbjct: 175 MVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQ 234
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLIEWVY+QM ++G++PD+LTYNI++ YRLGK+D+F RL DEM R GFSPD +TYNI
Sbjct: 235 YKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNI 294
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH+LGKG+KPLAAL LNHMKEVG DPSVLH+TTL+DGLSRAGNL+ACKYF DEM G
Sbjct: 295 LLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAG 354
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT Y+ +GEL+KA+++F M KGQLPNVFTYNSMIRG CMAG+F EAC
Sbjct: 355 CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREAC 414
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
++KEMESRGCNPNF+VY+TLVS LR AGKL+EA +VIR MV+KG Y+HLV K +Y+R
Sbjct: 415 WLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHLVPKMMKYRR 473
>gi|297820862|ref|XP_002878314.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324152|gb|EFH54573.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 475
Score = 473 bits (1218), Expect = e-131, Method: Compositional matrix adjust.
Identities = 212/299 (70%), Positives = 260/299 (86%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++GFPTTARTFN+LIC+CGE GLA++ V +F+KSK FN+RPFK+SYNAIL++LLG++Q
Sbjct: 177 MVQDGFPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQ 236
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YKLIEWVY+QM ++G++PD+LTYNI++ YRLGK+D+F RL DEM R G SPDF+TYNI
Sbjct: 237 YKLIEWVYEQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGLSPDFYTYNI 296
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH+LGKG+KPLAAL LNHMKEVG D SVLH+TTL+DGLSRAGNL+ACKYF DEM G
Sbjct: 297 LLHILGKGNKPLAALTTLNHMKEVGIDLSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAG 356
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT Y+ +GELEKA+++F M +GQLPNVFTYNSMIRG CMAG+F EAC
Sbjct: 357 CRPDVVCYTVMITGYVVSGELEKAKEMFKEMTVEGQLPNVFTYNSMIRGLCMAGEFREAC 416
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
++KEMESRGCNPNF+VY+TLVS LR AGKL+EA +VIR MV+KG Y+HLV K +Y+R
Sbjct: 417 WLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRDMVKKGHYVHLVPKMMKYRR 475
>gi|357140802|ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Brachypodium distachyon]
Length = 501
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 213/300 (71%), Positives = 257/300 (85%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG +ARTF++LICTCG+ GL R++VERFIKS FN+RPF+NS+NAILH LL I Q
Sbjct: 202 MTENGLSISARTFHLLICTCGQAGLRRRLVERFIKSSSFNYRPFRNSFNAILHTLLTIEQ 261
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y LIEWV+Q+M EG++PD+LTYNIVM AKY LGKLDQFHRLLDEMG++G +PD HTYNI
Sbjct: 262 YSLIEWVHQKMLMEGHSPDVLTYNIVMRAKYMLGKLDQFHRLLDEMGKNGLTPDLHTYNI 321
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKGDKPLAALNLLN+M +VG PSVLHFT L+DGLSRAGNL+ACKYFFDEM KG
Sbjct: 322 LLHVLGKGDKPLAALNLLNYMSDVGCVPSVLHFTNLIDGLSRAGNLEACKYFFDEMMKKG 381
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT Y+AA ELE+AQ LFD M+ +G+LPNV+TYN+MIRG C+ G+FD+AC
Sbjct: 382 CEPDVVCYTVMITGYVAAAELEEAQKLFDDMLVRGKLPNVYTYNTMIRGLCIVGEFDKAC 441
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+M+K+M+ RGC PNF VY+TLV LRNAGK AEA+ VI++M KG+Y+HL+S+F Y+RC
Sbjct: 442 SMLKDMDLRGCTPNFSVYSTLVCRLRNAGKDAEANNVIKYMANKGQYLHLLSRFGGYRRC 501
>gi|125532572|gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indica Group]
Length = 508
Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust.
Identities = 203/300 (67%), Positives = 256/300 (85%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P ++RTF++L+CT G GL R++VERFIKS FN+RPF+NS+NAILH LL I Q
Sbjct: 209 MTDKGLPVSSRTFHLLVCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQ 268
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y LIEWV+Q+M EG++PD+LTYN+VM AKY LGKL+QFH+LLDEMG++G +PD +TYN+
Sbjct: 269 YSLIEWVHQKMIAEGHSPDVLTYNVVMRAKYMLGKLNQFHKLLDEMGKNGLAPDLYTYNL 328
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKGDKPLAALNLLN+M +VG P+VLHFT L+DGLSRAGNL+ACKYFFDEM KG
Sbjct: 329 LLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKG 388
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT Y+AAGE ++AQ FD M+ +GQLPNV+TYNSMI G C+ G+FD+AC
Sbjct: 389 CQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKAC 448
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+++K+MESRGC PNF VY+TLVS LRNAGK +EA+ +I++M KG Y+HL+S+F+RY+RC
Sbjct: 449 SLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLHLLSRFRRYRRC 508
>gi|115482834|ref|NP_001065010.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|31432949|gb|AAP54520.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|62733610|gb|AAX95727.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639619|dbj|BAF26924.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|125575336|gb|EAZ16620.1| hypothetical protein OsJ_32092 [Oryza sativa Japonica Group]
Length = 507
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 203/300 (67%), Positives = 255/300 (85%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P ++RTF++L+CT G GL R++VERFIKS FN+RPF+NS+NAILH LL I Q
Sbjct: 208 MTDKGLPVSSRTFHLLVCTSGRAGLRRRLVERFIKSSNFNYRPFRNSFNAILHTLLTIEQ 267
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y LIEWV+Q+M EG++PD+LTYN+VM AKY L KLDQFH+LLDEMG++G +PD +TYN+
Sbjct: 268 YSLIEWVHQKMIAEGHSPDVLTYNVVMRAKYMLRKLDQFHKLLDEMGKNGLAPDLYTYNL 327
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKGDKPLAALNLLN+M +VG P+VLHFT L+DGLSRAGNL+ACKYFFDEM KG
Sbjct: 328 LLHVLGKGDKPLAALNLLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKG 387
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMIT Y+AAGE ++AQ FD M+ +GQLPNV+TYNSMI G C+ G+FD+AC
Sbjct: 388 CQPDVVCYTVMITGYVAAGEFDEAQKFFDDMLLRGQLPNVYTYNSMICGLCIVGEFDKAC 447
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+++K+MESRGC PNF VY+TLVS LRNAGK +EA+ +I++M KG Y+HL+S+F+RY+RC
Sbjct: 448 SLLKDMESRGCTPNFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLHLLSRFRRYRRC 507
>gi|242039157|ref|XP_002466973.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
gi|241920827|gb|EER93971.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
Length = 504
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 200/300 (66%), Positives = 250/300 (83%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G P ++RTF++LIC G+ GL R++VE FIKS FN+RPF+N++NAILH LL I Q
Sbjct: 205 MMDKGLPVSSRTFHLLICASGKAGLRRRLVEGFIKSSTFNYRPFRNAFNAILHTLLTIEQ 264
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y LIEWV+++M EGY+PD+LTYN+VM AKY LGKLDQFHRLLDEMGR G +PD HTYN+
Sbjct: 265 YSLIEWVHEKMILEGYSPDVLTYNVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNL 324
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKGDKPLAALNLLN+M +VG P+VLHFT L+DGL RAGNL+ACKYFFDEM KG
Sbjct: 325 LLHVLGKGDKPLAALNLLNYMSDVGCVPNVLHFTNLIDGLGRAGNLEACKYFFDEMIKKG 384
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMI+SY+AAGE E+AQ FD M+ +GQLPNV+TYNSMIRG C G+FD+A
Sbjct: 385 CDPDVVCYTVMISSYVAAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAF 444
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
M+K+M+S GC PNF VY++LVS LR+AGK +A+ VI++M +KG Y+HL+S+F ++RC
Sbjct: 445 AMLKDMDSHGCTPNFSVYSSLVSRLRSAGKDTQANNVIKYMTDKGHYLHLLSRFGGFRRC 504
>gi|226530981|ref|NP_001141613.1| uncharacterized protein LOC100273731 [Zea mays]
gi|194705268|gb|ACF86718.1| unknown [Zea mays]
gi|414870824|tpg|DAA49381.1| TPA: hypothetical protein ZEAMMB73_722490 [Zea mays]
Length = 504
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 195/300 (65%), Positives = 249/300 (83%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G P ++RTF++LIC +VGL R++VERFI+S FN+RPF+N++NAIL+ LL I Q
Sbjct: 205 MAAKGLPVSSRTFHLLICASVKVGLRRRLVERFIRSSTFNYRPFRNAFNAILYTLLTIEQ 264
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y LIEWV+++M EGY+PD+LTYN+V+ AKY LGKLDQFH+LLDEMG++G +PD HTYN+
Sbjct: 265 YSLIEWVHEKMILEGYSPDVLTYNVVLRAKYMLGKLDQFHQLLDEMGKNGLTPDLHTYNL 324
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLHVLGKGDKPLAALNLLN+M +VG P+VLHFT L+DGL RAGNL+AC+YFFDEM KG
Sbjct: 325 LLHVLGKGDKPLAALNLLNYMSDVGCRPNVLHFTNLIDGLGRAGNLEACRYFFDEMMKKG 384
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVVCYTVMI SY+AAGE E+AQ FD M+ +GQLPNV+TYNSMI+G C G+FD+A
Sbjct: 385 CDPDVVCYTVMIASYVAAGEFEEAQRFFDDMLMRGQLPNVYTYNSMIQGLCAVGEFDKAF 444
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
TM+K+M+S GC PNF VY++LV LRNAGK +A+ VI++M +KG Y+HL+S+F ++RC
Sbjct: 445 TMLKDMDSHGCTPNFSVYSSLVRRLRNAGKDTQANNVIKYMTDKGHYLHLLSRFGGFRRC 504
>gi|358348674|ref|XP_003638369.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355504304|gb|AES85507.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 426 bits (1096), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/314 (65%), Positives = 246/314 (78%), Gaps = 16/314 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G+ TARTFNILI TCGE GLA+ +VERFIKSK FN+RPFK+SYNAILH+ L + Q
Sbjct: 187 MIGKGYKATARTFNILIRTCGEAGLAKTLVERFIKSKSFNYRPFKHSYNAILHSFLVLNQ 246
Query: 61 YKLIEWVYQQMS-DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YKLIEWVY+QM D G++ DILTYNIV+ AKYRLGK+DQ LL EM R+GFSPDFHTYN
Sbjct: 247 YKLIEWVYEQMLLDGGFSSDILTYNIVIYAKYRLGKVDQVLTLLGEMDRNGFSPDFHTYN 306
Query: 120 ILLHVLGKGD---------------KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
ILLH + KGD + AL LLN+M+E G +P+VLHFTTL+DG SRAG
Sbjct: 307 ILLHAISKGDIGKGDLDKEDLGKEKEQFKALKLLNYMRETGIEPTVLHFTTLIDGFSRAG 366
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
LDAC+YFF+EM GCMPDVV YTVMIT Y+ A ELEKAQ++F+ M++K +PNVFTYN
Sbjct: 367 KLDACQYFFNEMKKNGCMPDVVAYTVMITGYVVARELEKAQEMFEEMLSKELVPNVFTYN 426
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
SMIRG CMAGKFDEAC+M KEME +GC+PN +VY TLVS LRNAG++A+A EVI+ M E
Sbjct: 427 SMIRGLCMAGKFDEACSMFKEMERKGCSPNSVVYITLVSCLRNAGRVADAREVIKQMTET 486
Query: 285 GKYIHLVSKFKRYK 298
GKY HL+S+FK YK
Sbjct: 487 GKYAHLLSRFKGYK 500
>gi|224134841|ref|XP_002321918.1| predicted protein [Populus trichocarpa]
gi|222868914|gb|EEF06045.1| predicted protein [Populus trichocarpa]
Length = 159
Score = 263 bits (672), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 120/159 (75%), Positives = 136/159 (85%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
MKE DP+VLH+TTL+DGL RAGNL C+YFFDEM GC+PDVVCYTVMIT YI GE
Sbjct: 1 MKEASIDPTVLHYTTLIDGLGRAGNLLGCQYFFDEMIKAGCIPDVVCYTVMITGYIMNGE 60
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
LEKAQ++F+ MI GQLPNVFTYNSMIRG CMAGKF+EAC+M+KEMESRGCNPNF VY T
Sbjct: 61 LEKAQEMFEDMIVNGQLPNVFTYNSMIRGLCMAGKFEEACSMLKEMESRGCNPNFHVYRT 120
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
LV NLRNAGKL+EAHEVI+ M+EK +Y HLV+K KRYKR
Sbjct: 121 LVRNLRNAGKLSEAHEVIKQMIEKSQYSHLVTKIKRYKR 159
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 55/115 (47%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ + +M G PD++ Y +++ G+L++ + ++M +G P+ TYN ++
Sbjct: 30 QYFFDEMIKAGCIPDVVCYTVMITGYIMNGELEKAQEMFEDMIVNGQLPNVFTYNSMIRG 89
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L K A ++L M+ G +P+ + TL+ L AG L +M K
Sbjct: 90 LCMAGKFEEACSMLKEMESRGCNPNFHVYRTLVRNLRNAGKLSEAHEVIKQMIEK 144
>gi|13620171|emb|CAC36392.1| hypothetical protein [Capsella rubella]
Length = 150
Score = 247 bits (631), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 111/149 (74%), Positives = 131/149 (87%)
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+HFTTL+DGLSRAG L+AC+YF DEM GC PDVVCYTVMIT YI+ GELEKA+++F
Sbjct: 1 IHFTTLVDGLSRAGKLEACQYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKE 60
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M KGQLPNVFTYNS+IRGFCMAGKF EAC+++KEMESRGCNPNF+VY+TLV+NLRNAGK
Sbjct: 61 MTEKGQLPNVFTYNSLIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGK 120
Query: 271 LAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
L EAHEV++ MVEKG Y HL+SK K+Y+R
Sbjct: 121 LLEAHEVVKDMVEKGHYAHLLSKLKKYRR 149
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 64/131 (48%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
R GKL+ +DEM + G +PD Y +++ G + A + M E G P+V
Sbjct: 12 RAGKLEACQYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVF 71
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ +L+ G AG EM ++GC P+ V Y+ ++ + AG+L +A ++ M
Sbjct: 72 TYNSLIRGFCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKLLEAHEVVKDM 131
Query: 212 ITKGQLPNVFT 222
+ KG ++ +
Sbjct: 132 VEKGHYAHLLS 142
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ +M G PD++ Y +++ G+L++ + EM G P+ TYN L+
Sbjct: 20 QYFMDEMVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSLIRG 79
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
K A +LL M+ G +P+ + ++TL++ L AG L +M KG
Sbjct: 80 FCMAGKFKEACSLLKEMESRGCNPNFVVYSTLVNNLRNAGKLLEAHEVVKDMVEKG 135
>gi|15232242|ref|NP_191563.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
gi|7076757|emb|CAB75919.1| putative protein [Arabidopsis thaliana]
gi|332646484|gb|AEE80005.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
Length = 838
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 117/174 (67%), Gaps = 35/174 (20%)
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
GKG+KPLAAL LNHMKEVG DPSVLH
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLH--------------------------------- 726
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
YT +I Y+ +GEL+KA+++F M KGQLPNVFTYNSMIRG CMAG+F EAC ++KE
Sbjct: 727 --YTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 784
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
MESRGCNPNF+VY+TLV LR AGKL+EA +VI+ MV+KG Y+HLVSK +Y+R
Sbjct: 785 MESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVSKMMKYRR 838
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M + G P +L Y ++ G+LD+ + EM G P+ TYN ++ L
Sbjct: 714 HMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAG 773
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ A LL M+ G +P+ + ++TL+ L +AG L + EM KG
Sbjct: 774 EFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 173 bits (439), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 15/291 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
MI+ G T+ L+ C G+ V L RK+ ER +RP +YN I+H
Sbjct: 140 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER-------GYRPNAITYNNIMH 192
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAP-DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
L R+ ++++M + G P D+ TY+ ++ + + GK+D RL++ M G S
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS 252
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ TY+ LLH L K K A LL M G P+++ + T++DG + G +D +
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+EM + GC P+VV YTV++ ++ G+ E A L + M+ KG +PN+FTYNS++ FC
Sbjct: 313 LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 372
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ + AC ++ M +GC PN + YNT+++ L A K+ E ++ M+
Sbjct: 373 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS 423
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 154/290 (53%), Gaps = 7/290 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P + T+N +I + A +++E + + F P SYN +LH + +
Sbjct: 41 PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN---GFAPNVFSYNTVLHGFCKANRVEN 97
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
W+ +QM G PD+++Y V+ +L ++D+ R++D+M + G P+ TY L+
Sbjct: 98 ALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVD 157
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CM 182
+ A+ L+ M E G+ P+ + + +M GL LD+ F EM G C
Sbjct: 158 GFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCP 217
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDV Y+ ++ S + +G+++ A L + M++KG PNV TY+S++ G C AGK DEA +
Sbjct: 218 PDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL 277
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ M GC+PN + YNT++ G++ EA+ ++ MV+ G ++V+
Sbjct: 278 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 327
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 153/290 (52%), Gaps = 8/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ N TFN +I C V +A ++ +S P +YN+++H L
Sbjct: 421 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES---GCTPNLVTYNSLVHGLCK 477
Query: 58 IRQYKLIEWVYQQMS-DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R++ E++ ++M+ +G +PDI+TYN V+ + ++D+ ++L +M G +PD
Sbjct: 478 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 537
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+I++ L K A N+L M + GFDP + + TL+DG + GNLD +
Sbjct: 538 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 597
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+KG PDVV +++ I G L +A +L + M+ G +P+ TYN++++GFC A +
Sbjct: 598 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRT 657
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE-AHEVIRHMVEKG 285
++A + + M GC P+ Y TLV +L + + EV + MV+ G
Sbjct: 658 EDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTG 707
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 135/264 (51%), Gaps = 3/264 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A ++VE + P +Y+++LH L + + Q+M+ G +P+I
Sbjct: 234 GKVDDACRLVEAMVSK---GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 290
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ +LG++D+ + LL+EM G P+ TY +LL K K A+ L+
Sbjct: 291 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 350
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M E G+ P++ + +L+D + ++ M KGC+P+VV Y +I A +
Sbjct: 351 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 410
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ + L + M++ +P++ T+N++I C + D A + ++ GC PN + YN+
Sbjct: 411 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 470
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEK 284
LV L + + +A ++R M K
Sbjct: 471 LVHGLCKSRRFDQAEYLLREMTRK 494
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 7/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P ++ +I C +V A +V+++ I+ +P +Y ++
Sbjct: 105 MVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQR---GCQPNVITYGTLVDGFCR 161
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDFH 116
+ + ++M++ GY P+ +TYN +M KLD +L EM SG PD
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+ ++ L K K A L+ M G P+V+ +++L+ GL +AG LD M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P++V Y +I + G +++A L + M+ G PNV TY ++ FC GK
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++A +++ M +G PN YN+L+ ++ A +++ M++KG ++VS
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 15/300 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G T+ +L+ C CG+ +GL +VE+ LF +YN++L
Sbjct: 316 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF-------TYNSLLD 368
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ + + M +G P++++YN V+ + K+ + LL++M + P
Sbjct: 369 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 428
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D T+N ++ + K + A L N ++E G P+++ + +L+ GL ++ D +Y
Sbjct: 429 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 488
Query: 174 DEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
EM K GC PD++ Y +I + +++A LF M++ G P+ TY+ +I C
Sbjct: 489 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 548
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEA +++ M G +P + Y TL+ G L +A E+++ ++ KG Y +V+
Sbjct: 549 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 608
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 7/148 (4%)
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+++ GL AG F EM+ K C PD V Y MI + L+ A L + M+
Sbjct: 15 SILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN 73
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G PNVF+YN+++ GFC A + + A ++++M RGC P+ + Y T+++ L ++ EA
Sbjct: 74 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEA 133
Query: 275 HEVIRHMVEKG------KYIHLVSKFKR 296
V+ M+++G Y LV F R
Sbjct: 134 CRVMDKMIQRGCQPNVITYGTLVDGFCR 161
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M KG + + S++RG C AG+ +A +EM S+ C P+ + YNT+++ L + +
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59
Query: 271 LAEAHEVIRHMVEKG 285
L +A ++ MV+ G
Sbjct: 60 LDDAIRLLEEMVDNG 74
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 162/317 (51%), Gaps = 36/317 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVV-------------------------ER 32
MIE GF TFN L+ C G V ARK++ ++
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 33 FIKSK-------LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
F+++K P +Y+A++H L + + E + ++M+ G PD++ Y+
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + GKL + + L EM + SPD TYN ++ L K K A +L+ M+E G
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297
Query: 146 -FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
P V+ ++T+++GL ++ L + D M GC PDVV YT +I G LE+A
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ L GM G PNV TY ++I G C A K DEA +M+EM + GC PN + YNT+V+
Sbjct: 358 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 417
Query: 265 LRNAGKLAEAHEVIRHM 281
L +G++ EA ++++ M
Sbjct: 418 LCVSGRIKEAQQLVQRM 434
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 159/289 (55%), Gaps = 13/289 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G A T++ LI C ++ A +++ R S P Y++I+HA
Sbjct: 188 MKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS---GCTPDVVVYSSIIHAF-- 242
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG-FSPD 114
+ KL+E Q+M + +PD++TYN V+ +LGK+ + +LD+M SG PD
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TY+ +++ L K D + A LL+ M + G +P V+ +TT++DGL + G L+ +Y
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M GC P+VV YT +I+ A ++++A+ + + M G PN+ TYN+M+ G C++G
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 422
Query: 235 KFDEACTMMKEMES--RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ EA +++ M+ C+P+ Y T+V+ L ++ + EA +++ M
Sbjct: 423 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 146/275 (53%), Gaps = 6/275 (2%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A +++E K F P ++ I+ A+ ++ + G
Sbjct: 1 CNAGDLHAALELLEEM---KSAGFAPDAFTHTPIITAMANAGD---LDGAMDHLRSMGCD 54
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+++TY ++ A R KL++ +LL+EM G P+ TYN+L+ L K AA ++
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M E GF P+V+ F +L+DG + GN+D + M KG P+VV Y+ +I
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ + +A+++ + M G P+ FTY+++I G C A K +EA M++ M GC P+ +V
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y++++ +GKL EA + ++ M ++ K +V+
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 269
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 128/252 (50%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y A++ A ++ + + ++M + G P+++TYN+++ A +L + +
Sbjct: 55 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 114
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ +M GF+P+ T+N L+ K A LL M G P+V+ ++ L+DGL +
Sbjct: 115 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 174
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ K +EM G PD Y+ +I A ++E+A+ + M G P+V
Sbjct: 175 SQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 234
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+S+I FC +GK EA ++EM + +P+ + YNT++ L GK+AEA ++ M
Sbjct: 235 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ 294
Query: 283 EKGKYIHLVSKF 294
E G + V +
Sbjct: 295 ESGDVLPDVVTY 306
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/317 (32%), Positives = 161/317 (50%), Gaps = 36/317 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVV-------------------------ER 32
MIE GF TFN L+ C G V ARK++ ++
Sbjct: 240 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299
Query: 33 FIKSKLF-------NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
F+++K P +Y+A++H L + + E + ++M+ G PD++ Y+
Sbjct: 300 FLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 359
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + GKL + + L EM + SPD TYN ++ L K K A +L M+E G
Sbjct: 360 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG 419
Query: 146 -FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
P V+ ++T+++GL ++ L + D M GC PDVV YT +I G LE+A
Sbjct: 420 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 479
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ L GM G PNV TY ++I G C A K DEA +M+EM + GC PN + YNT+V+
Sbjct: 480 EYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNG 539
Query: 265 LRNAGKLAEAHEVIRHM 281
L +G++ EA ++++ M
Sbjct: 540 LCVSGRIKEAQQLVQRM 556
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 154/284 (54%), Gaps = 9/284 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++NI+I C G++ A +++E K F P ++ I+ A+ ++
Sbjct: 114 SYNIVISGFCNAGDLHAALELLEEM---KSAGFAPDAFTHTPIITAMANAGD---LDGAM 167
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ G P+++TY ++ A R KL++ +LL+EM G P+ TYN+L+ L K
Sbjct: 168 DHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKL 227
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AA +++ M E GF P+V+ F +L+DG + GN+D + M KG P+VV Y
Sbjct: 228 SMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY 287
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I + + +A+++ + M T+G P+ FTY+++I G C A K +EA M++ M
Sbjct: 288 SALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAG 347
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
GC P+ +VY++++ +GKL EA + ++ M ++ K +V+
Sbjct: 348 SGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 391
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 158/289 (54%), Gaps = 13/289 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G A T++ LI C ++ A +++ R S P Y++I+HA
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGS---GCTPDVVVYSSIIHAF-- 364
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG-FSPD 114
+ KL+E Q+M + +PD++TYN V+ +LGK+ + +L++M SG PD
Sbjct: 365 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPD 424
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TY+ +++ L K D + A LL+ M + G +P V+ +TT++DGL + G L+ +Y
Sbjct: 425 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 484
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M GC P+VV YT +I+ A ++++A+ + + M G PN+ TYN+M+ G C++G
Sbjct: 485 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSG 544
Query: 235 KFDEACTMMKEMES--RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ EA +++ M+ C+P+ Y T+V+ L ++ + EA +++ M
Sbjct: 545 RIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 129/252 (51%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y A++ A ++ + + ++M + G P+++TYN+++ A +L + +
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ +M GF+P+ T+N L+ K A LL M G P+V+ ++ L+DGL +
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ K +EM +G PD Y+ +I A ++E+A+ + M G P+V
Sbjct: 297 SQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVV 356
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+S+I FC +GK EA ++EM + +P+ + YNT++ L GK+AEA ++ M
Sbjct: 357 YSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ 416
Query: 283 EKGKYIHLVSKF 294
E G + V +
Sbjct: 417 ESGDVLPDVVTY 428
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 113/257 (43%), Gaps = 46/257 (17%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF----SPDFHTYNILLH 123
+ S G++ ++N ++ R K HR ++ RS PD +YNI++
Sbjct: 65 WAPASIPGFSHTAFSWNSLLQVLVRCKK----HREAGDLFRSELLASCEPDVCSYNIVIS 120
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
AAL LL MK GF P T ++ ++ AG+LD D + + GC P
Sbjct: 121 GFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDP 177
Query: 184 DVVCYTVMITSYIAAGELEK-----------------------------------AQDLF 208
+VV YT +I ++ A +LE+ AQD+
Sbjct: 178 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 237
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
MI G PNV T+NS++ GFC G D+A ++ M ++G PN + Y+ L+ L +
Sbjct: 238 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 297
Query: 269 GKLAEAHEVIRHMVEKG 285
K EA EV+ M +G
Sbjct: 298 QKFLEAKEVLEEMKTRG 314
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 5/128 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C CG + A +++ K P +Y ++ L R+ E V ++M + G
Sbjct: 470 LCKCGRLEEAEYLLQGM---KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 526
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFHTYNILLHVLGKGDKPLAA 134
P+++TYN ++ G++ + +L+ M GR+ SPD TY +++ L D A
Sbjct: 527 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 586
Query: 135 LNLLNHMK 142
LL MK
Sbjct: 587 EQLLEQMK 594
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/286 (32%), Positives = 150/286 (52%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-R 59
M +NG RT+N LI T G+ G + F + + P +YN++++ L + R
Sbjct: 105 MRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGR 164
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
K +E + ++M G PD++TY+ ++ + G+ + +L EM R G PD T+
Sbjct: 165 SQKAME-LLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFT 223
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ LGK + AL LL+ MKE G P V+ + L+ G + G+L DEM
Sbjct: 224 ALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRN 283
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC PDVV Y+ +IT I A +L++A + M +G P+ TYN++I G AG ++A
Sbjct: 284 GCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDA 343
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+GCNP+ + Y+TL++ L A ++ A + M G
Sbjct: 344 GRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVG 389
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/285 (32%), Positives = 151/285 (52%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G P T++ LI G+ G K + F + K +P ++ A++ AL +
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G P ++TYN ++ ++G L + + LLDEM R+G PD TY+
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A +L M++ G P + + TL++GL +AG L+ FD M +KG
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDVV Y+ +IT+ A +E A LF+ M + G P++FTY S+I AG+ D+A
Sbjct: 355 CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD 414
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G +P+ + YN +++L G+ EA ++ M E G
Sbjct: 415 RLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 144/287 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI G+VG + + K +P +Y+ ++ L+ Q
Sbjct: 245 MKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V ++M EG PD +TYN ++ + G L+ RL D M G +PD TY+
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LGK + +A L M+ VG P + + +++ L +AG +D F EM KG
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y + S G ++A+ +F+ M G LP+V TY++++ G + D+AC
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDAC 484
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
++KE+ +GC + L ++ + L + G + EAHE+++ KG +
Sbjct: 485 GLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW 531
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 141/274 (51%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+++ LI + G G +E + + +P +YN ++ L Q+ + +M
Sbjct: 46 SYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEM 105
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G PD+ TYN ++ + G+L + L EM G PD TYN L++ LGK +
Sbjct: 106 RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRS 165
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ LL M+ G P V+ +++L+ GL + G F EM +G PD + +T +
Sbjct: 166 QKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTAL 225
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + AG ++ A +L D M +G P V TYN++I GF G EA ++ EM+ GC
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGC 285
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y+ L++ L A +L EA +V++ M ++G
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 139/282 (49%), Gaps = 1/282 (0%)
Query: 5 GFPT-TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
GFP+ T+N L+ + G + F + K + P SY+ ++++L +++
Sbjct: 3 GFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEA 62
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V +M +G P++ TYN ++ + G+ D+ RLL EM +G PD TYN L+
Sbjct: 63 ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLIS 122
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
LGK + A L M+E G P + +L+ GL + G +EM GC P
Sbjct: 123 TLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPP 182
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DV+ Y+ +IT GE KA LF M +G+ P+ T+ +++ AG+ D+A ++
Sbjct: 183 DVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ RG P + YN L++ G L EA+ ++ M G
Sbjct: 243 DEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNG 284
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 124/210 (59%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P+++TYN ++ A + G+ ++ L +E+ + ++PD +Y+ L++ LG+ K AAL
Sbjct: 6 SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
++ M+ G P++ + TL+D L +AG D EM + GC+PDV Y +I++
Sbjct: 66 VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AG L +A LF M +G +P+ FTYNS+I G G+ +A +++EME GC P+ +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
Y++L++ L G+ +A ++ + M +G+
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGR 215
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 146/303 (48%), Gaps = 6/303 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T+N LI G+ GL F + K P +Y+ ++ AL +
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAAR 374
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++++M G PD+ TY ++ + G++D RL EM G SPD TYN
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LG+G + A + MKE G P V + L+ GLS+ +D E+ +G
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C D + + + + G +++A +L +KG P +YN++I AG+ EA
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
+++++ +G P+ + Y++L+S L G++ A E++ M ++G Y +LV K
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Query: 295 KRY 297
+ +
Sbjct: 615 QDW 617
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 121/261 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++ LI G+ F + + +P +Y +I+ L Q + ++ +M
Sbjct: 361 TYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEM 420
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G +PD++TYN + + R G+ + ++ ++M SG PD TY+ LL L K +
Sbjct: 421 RGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEV 480
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A LL + E G L F ++ L+ GN+D +KG P Y +
Sbjct: 481 DDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNAL 540
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + AG + +A + + + +G P++ +Y+S+I G+ D A +++EM RG
Sbjct: 541 IDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGL 600
Query: 252 NPNFLVYNTLVSNLRNAGKLA 272
+ Y+ LV L++ G A
Sbjct: 601 KLSPRSYSNLVRKLQDWGARA 621
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 143/285 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+N+L+ +VG + F + K F+P +YN +L AL +
Sbjct: 161 MLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGR 220
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M+ +G +PD TY+ ++ + G++++ H++ EM G + D YN
Sbjct: 221 VGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNS 280
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L K L+ M GF P F T+MD L +A DA + F M G
Sbjct: 281 LLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESG 340
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD++ Y ++I SY G+ +A+ + + M+ G +P TYNS+I G+ DEA
Sbjct: 341 CKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EME+ GC P+ + YN L+ L G+ A + + M +KG
Sbjct: 401 AVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKG 445
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++ G +N+LI G G +E F + K+ P + +Y +++AL +
Sbjct: 91 LVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M + G P+I TYN++M A ++G+LD L EM R GF P TYNI
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L + AA L + M G P ++TL++GL ++G ++ F EM ++G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D+V Y ++ + AG +++ L M KG P+ F++N+++ A K D A
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M GC P+ + YN L+ + G A+A +++ MVE G
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAG 375
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 142/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P T LI G + + F +++ F P +++ ++ L+ +
Sbjct: 21 MVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGE 80
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E VY+++ +G D YN+++ R G+LD + EM G PD +TY
Sbjct: 81 FERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGF 140
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ LGK + A + + M E G P++ + LMD + G LD F EM +G
Sbjct: 141 LVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG 200
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P VV Y +++ + +AG + A+ LF M G P+ +TY++++ G +G+ +EA
Sbjct: 201 FQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAH 260
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM RG + + YN+L++ L AG + ++++ M KG
Sbjct: 261 KVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKG 305
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 12/305 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF + T+NIL+ C+ G VG ARK+ F K P +Y+ +++ L
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKL---FHKMTGDGCSPDSYTYSTLVNGLGK 252
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V+++M D G A D++ YN ++ + G +D+ +L+ EM R GF PD +
Sbjct: 253 SGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFS 312
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ LGK +KP AA + M E G P ++ + L+D +R G+ + +EM
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +P+ Y +I G++++A + + M T G P+V TYN ++ G+
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLV 291
A + ++M+ +G P+ L Y + L +L EA + + M V+K Y L+
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492
Query: 292 SKFKR 296
R
Sbjct: 493 RAAHR 497
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 2/201 (0%)
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
+V+ A + G LD LL EM G +T L+ G+G+K A +L N +
Sbjct: 2 LVVLASW--GILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESF 59
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
P+V FT L+D L +G + + + ++ KGC D Y V+I + +G+L+ A
Sbjct: 60 ACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSA 119
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++F M KG P+ +TY ++ AG+ EA + M RG PN YN L+
Sbjct: 120 MEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDA 179
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
R G+L A + M +G
Sbjct: 180 FRKVGQLDMALGLFAEMKRRG 200
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%), Gaps = 6/205 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF A +FN ++ G+ AR+V R ++S +P SYN ++ +
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVES---GCKPDLISYNILIDSYAR 357
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++M + G+ P+ TYN ++ G++D+ +L+EM +G PD T
Sbjct: 358 FGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVT 417
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ +LGK + A L MK+ G +P L + +DGL+ LD F +M
Sbjct: 418 YNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMK 477
Query: 178 NKGCMPDVVCYTVMITSYIAAGELE 202
GC D Y ++I + AG+ E
Sbjct: 478 AVGCPVDKAMYRILIRAAHRAGDTE 502
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
M+ + G L+ + L M+ +G+ T +I + K +A + + ES
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFA 60
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C+P + L+ L N+G+ A V + +V+KG
Sbjct: 61 CSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG 95
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 152/275 (55%), Gaps = 7/275 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF ILI C G++G A ++++ + + +N ++ L R+ ++
Sbjct: 879 TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVIL---HNVVIKGLCSARKLDSALELF 935
Query: 69 QQMSDEGYAP-DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++M + G P D+ TY+ ++ + + GK+D RL+++M G SP+ TY+ LLH L K
Sbjct: 936 KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCK 995
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A LL M G P+++ + T++DG + G +D + +EM + GC P+VV
Sbjct: 996 AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YTV++ ++ G+ E A L + M+ KG +PN+FTYNS++ FC + + AC ++ M
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 1115
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+GC PN + YNT+++ L A K+ E ++ M+
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 143/284 (50%), Gaps = 1/284 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
IE + T++ LI G E F + + + +IL L Q
Sbjct: 153 IEGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQC 212
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+++MS + PD +TYN ++ + +LD RLL+EM +GF+P+ +YN +
Sbjct: 213 SDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTV 271
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
LH K ++ AL LL M G P V+ +TT+++GL + +D D+M +GC
Sbjct: 272 LHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGC 331
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+V+ Y ++ + G+L+ A +L M +G PN TYN+++ FC + A
Sbjct: 332 QPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQ 391
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M GC P+ + Y+T++S AGKL EAH+++ M+ +G
Sbjct: 392 VLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRG 435
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 152/290 (52%), Gaps = 8/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ N TFN +I C V +A ++ +S P +YN+++H L
Sbjct: 1149 MLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES---GCTPNLVTYNSLVHGLCK 1205
Query: 58 IRQYKLIEWVYQQMS-DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R++ E++ ++M+ +G +PDI+TYN V+ + ++D+ ++L +M G +PD
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+I++ L K A N+L M + GFDP + + TL+DG + GNLD +
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+KG PDVV +++ I G L +A +L + M+ G +P+ TYN++++GFC A
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE-AHEVIRHMVEKG 285
++A + + M GC P+ Y TLV +L + + EV + MV+ G
Sbjct: 1386 EDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTG 1435
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 145/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G P A ++ +I C G++ A ++E+ I+ RP + ++ AL
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRR---GCRPDVACLSTLIDALCK 452
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + APD++ Y+I++ A + +L + LD M ++ PD T
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K + A L + M+ G P V+ ++ ++ + NLD+ + M
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C+PDVV Y+ +I AG ++KA D+F M+ G PN+ TYN++I G C K +
Sbjct: 573 EAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVE 632
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++ M + C P+ + Y L++ L NA +L EA V+R M +KG
Sbjct: 633 QAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKG 680
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 45/303 (14%)
Query: 28 KVVERFIKSK----LFNFRPFKNSY-------NAILHALLGIRQYKLIEWVYQQMSDEGY 76
KV++R I F + ++ Y N +L+ L+ QY +++ + +
Sbjct: 98 KVLQRLIDPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQW 157
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS------------------------ 112
D +TY+ ++ R GK+ + L DEM R G
Sbjct: 158 GGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVL 217
Query: 113 ----------PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
PD TYN +++ L K D+ A+ LL M + GF P+V + T++ G +
Sbjct: 218 HFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 277
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
A ++ + ++M +GC PDVV YT +I ++++A + D MI +G PNV T
Sbjct: 278 ANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +++ GFC G D A ++++M RG PN + YN ++ + AH+V++ M+
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397
Query: 283 EKG 285
+ G
Sbjct: 398 QTG 400
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 135/264 (51%), Gaps = 3/264 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A ++VE + P +Y+++LH L + + Q+M+ G +P+I
Sbjct: 962 GKVDDACRLVEDMVSK---GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNI 1018
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ +LG++D+ + LL+EM G P+ TY +LL K K A+ L+
Sbjct: 1019 VTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEV 1078
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M E G+ P++ + +L+D + ++ M KGC+P+VV Y +I A +
Sbjct: 1079 MVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK 1138
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ + L + M++ +P++ T+N++I C + D A + ++ GC PN + YN+
Sbjct: 1139 VHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNS 1198
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEK 284
LV L + + +A ++R M K
Sbjct: 1199 LVHGLCKSRRFDQAEYLLREMTRK 1222
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 151/303 (49%), Gaps = 10/303 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + LI C + A++++ I + P +Y+ ++HAL
Sbjct: 431 MIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIG---MDCAPDVVAYSILIHALCK 487
Query: 58 IRQYKLIE-WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
++ E W+ + + Y PD++TYN V+ + +++ L D M +G PD
Sbjct: 488 AKRLPEAESWLDVMVKNRCY-PDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVV 546
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+I++H K + +A +L MKE P V+ ++ L++GL +AG +D F EM
Sbjct: 547 TYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM 606
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P++V Y +I ++E+A ++ + M + P+ TY +I G C A +
Sbjct: 607 LGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRL 666
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM--VEKGKYIHLVSKF 294
+EA +++EM+ +GC P+ + Y TL+ L+ L ++++ M E+G++ ++
Sbjct: 667 EEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARL 726
Query: 295 KRY 297
R+
Sbjct: 727 HRF 729
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 14/299 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
MI+ G T+ L+ C G+ V L RK+ ER +RP +YN I+H
Sbjct: 326 MIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER-------GYRPNAITYNNIMH 378
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ V Q M G PD + Y+ ++ + GKL + H LL++M R G P
Sbjct: 379 VFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP 438
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D + L+ L K +A LL + P V+ ++ L+ L +A L + +
Sbjct: 439 DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWL 498
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M C PDVV Y ++ + + A LFD M G +P+V TY+ +I FC
Sbjct: 499 DVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKD 558
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D A M++ M+ C P+ + Y+ L++ L AG + +A +V + M+ G +LV+
Sbjct: 559 NNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVT 617
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 121/232 (52%), Gaps = 12/232 (5%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHRLLDEMGRSGFSPDFHTYNIL 121
+W Q EGY D T N ++ A RL + Q +R + SP+ T+ IL
Sbjct: 832 DWATSQ---EGYNHDTYTCNCLLQALLRLKRPKDALQVYR-----NKLCCSPNMFTFTIL 883
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG- 180
+H L + A LL M G +V+ ++ GL A LD+ F EM G
Sbjct: 884 IHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDV Y+ ++ S + +G+++ A L + M++KG PNV TY+S++ G C AGK DEA
Sbjct: 944 CPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEAT 1003
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++ M GC+PN + YNT++ G++ EA+ ++ MV+ G ++V+
Sbjct: 1004 ALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 1055
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NGF ++N ++ C V A ++E+ + P SY +++ L
Sbjct: 256 MVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTR---GCPPDVVSYTTVINGLCK 312
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q V +M G P+++TY ++ R+G LD L+ +M G+ P+ T
Sbjct: 313 LDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAIT 372
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++HV + + A +L M + G P ++++T++ G +AG L ++M
Sbjct: 373 YNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMI 432
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC PDV C + +I + A ++ AQ+L I P+V Y+ +I C A +
Sbjct: 433 RRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLP 492
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + + M C P+ + YN++V L + ++ +A + M G +V+
Sbjct: 493 EAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVT 547
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 147/300 (49%), Gaps = 15/300 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G T+ +L+ C CG+ +GL +VE+ LF +YN++L
Sbjct: 1044 MVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF-------TYNSLLD 1096
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ + + M +G P++++YN V+ + K+ + LL++M + P
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D T+N ++ + K + A L N ++E G P+++ + +L+ GL ++ D +Y
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216
Query: 174 DEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
EM K GC PD++ Y +I + +++A LF M++ G P+ TY+ +I C
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEA +++ M G +P + Y TL+ G L +A E+++ ++ KG Y +V+
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 122/251 (48%), Gaps = 1/251 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++ ++H L + ++M G +++ +N+V+ KLD L
Sbjct: 875 PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934
Query: 103 LDEMGRSGF-SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
EM SG PD TY+ ++ L K K A L+ M G P+V+ +++L+ GL
Sbjct: 935 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+AG LD M GC P++V Y +I + G +++A L + M+ G PNV
Sbjct: 995 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY ++ FC GK ++A +++ M +G PN YN+L+ ++ A +++ M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114
Query: 282 VEKGKYIHLVS 292
++KG ++VS
Sbjct: 1115 IQKGCVPNVVS 1125
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 132/347 (38%), Gaps = 70/347 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+N LI C +V A +++E K + P +Y +++ L
Sbjct: 606 MLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQ---SCTPDSITYTCLINGLCN 662
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM----------- 106
+ + V ++M D+G PD +TY ++ A + L+ +LL EM
Sbjct: 663 ASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQWNAN 722
Query: 107 ------------------------------------GRSGFSPDFHTYNILLHVLGKGDK 130
+ FSP H Y + V +G
Sbjct: 723 GARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVT-AVATQGGF 781
Query: 131 PLAALNLLN-----HMKEVGFDPSVLHFTTLMDG--LSRAGNLDACKYFFD-EMANKGCM 182
+ +LN E + TT + G L N DA FFD + +G
Sbjct: 782 HHKIVRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYN 841
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL---PNVFTYNSMIRGFCMAGKFDEA 239
D ++ + + L++ +D + + +L PN+FT+ +I G C AG A
Sbjct: 842 HDTYTCNCLLQALL---RLKRPKDAL--QVYRNKLCCSPNMFTFTILIHGLCRAGDIGTA 896
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
++KEM G N +++N ++ L +A KL A E+ + M E G
Sbjct: 897 YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS 943
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 27/258 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N L+ + L V+ F + P +Y ++ L+ +
Sbjct: 1360 MLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKS 1419
Query: 61 YK-LIEWVYQQMSDEGYA-----PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
YK L+ V + M D G+ L +I + A RLG ++D G+ G D
Sbjct: 1420 YKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLG-----CAIVDMFGKCGSPQD 1474
Query: 115 FHT------------YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++ +L V + A L M G +P + F +L+
Sbjct: 1475 ARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCH 1534
Query: 163 AGNLDACKYFFDEMA-NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
AG LDA F ++ + G P V ++ +I G + +A+DL GM K P+
Sbjct: 1535 AGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGMPCK---PSAA 1591
Query: 222 TYNSMIRGFCMAGKFDEA 239
T+N ++ + + G F+ A
Sbjct: 1592 TWNCLLSAYKICGDFERA 1609
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+ G T++++I C C + + ++ F + K P +Y +L +L+
Sbjct: 624 MVRKGCVADVSTYSLVINCLCKSDDV-DQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDE 682
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ ++ ++ + PD YNI++ + ++D+ +L+D M PD TY
Sbjct: 683 KIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYT 742
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL LGK + A N+ M E G +P V+ +T+LMD L + G L F MA K
Sbjct: 743 SLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
C+PDVV Y+ +I S G +E+A F+ I+KG PNV Y+S+I F G D A
Sbjct: 803 RCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRA 862
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM+ R C PN + YN L+S L AG+L A +++ M + G LV+
Sbjct: 863 LELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 137/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G + L+ T G +E F + K F P N YN +L L+
Sbjct: 208 MWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGF 267
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y V+ ++ PD T+ I + + R G+LD + EM +SG P HT+ +
Sbjct: 268 YHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTV 327
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A N MK + P+V+ +TTL++GL++AG L+ F EM
Sbjct: 328 LIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENN 387
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD + Y +I AGE + A LF M +G +PN+ TYN MI AG+ EA
Sbjct: 388 CSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAW 447
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +++ +G P+ YNTL+ L G++ + +I+ MVEKG
Sbjct: 448 QLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 31/316 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI++G TF +LI + G + + F K P +Y +++ L +
Sbjct: 313 MIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGR 372
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ +M + +PD + YN ++ + G+ D L EM G P+ TYNI
Sbjct: 373 LEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNI 432
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ VLGK + A L + +KE G P V + TL+D L + G +D EM KG
Sbjct: 433 MISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Query: 181 --CM----------------------PDV-------VCYTVMITSYIAAGELEKAQDLFD 209
C+ P + + Y +++++I G +++A L +
Sbjct: 493 GECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLE 552
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M +P V TY +++ G AG+ DEA ++++EME +GC P+ + Y++L+++
Sbjct: 553 VMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRD 612
Query: 270 KLAEAHEVIRHMVEKG 285
+ E+ + MV KG
Sbjct: 613 QEEESLSLFDEMVRKG 628
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 138/276 (50%), Gaps = 6/276 (2%)
Query: 12 TFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L+ G V A K++E K + P +Y ++ L + +
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECI---PTVVTYTTLVDGLGKAGRLDEAVSLL 586
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M +G P ++TY+ +M + Y+ + ++ L DEM R G D TY+++++ L K
Sbjct: 587 REMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKS 646
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D AL++ MKE G +P + ++ TL+ L + +D F+E+ +PD Y
Sbjct: 647 DDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVY 706
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+M+ + + +++A L D M + LP++FTY S++ G +G+ +EA M +M
Sbjct: 707 NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + Y +L+ L GKL+ A + R M +K
Sbjct: 767 EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKK 802
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEWVYQ 69
T+ L+ G+ G + F K P +Y +++ L G + LI +++
Sbjct: 740 TYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALI--IFR 797
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M+ + PD++TY+ ++ + + G++++ + + G +P+ Y+ L+ GK
Sbjct: 798 AMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKG 857
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
AL L M+ P+++ + L+ GL++AG L+ + +EM GC+PD+V Y
Sbjct: 858 MVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYN 917
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++I G +++A+ F M KG +P+V T+ S+I K EAC + ME
Sbjct: 918 ILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEE 977
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G NP+ + YN L+ L AGK+ EA + M KG
Sbjct: 978 GYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKG 1013
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 151/358 (42%), Gaps = 66/358 (18%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G RT+NI+I G+ G + + F K P +YN ++ L Q
Sbjct: 418 MKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQ 477
Query: 61 YKLIEWVYQQMSDEGYA------------------------PDI-------LTYNIVMCA 89
+ + ++M ++G P + +TYN +M A
Sbjct: 478 MDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSA 537
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
G +D+ +LL+ M + P TY L+ LGK + A++LL M++ G +PS
Sbjct: 538 FIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPS 597
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
V+ +++LM + + FDEM KGC+ DV Y+++I + ++++A D+F
Sbjct: 598 VVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657
Query: 210 GMITKGQ-----------------------------------LPNVFTYNSMIRGFCMAG 234
M +G +P+ F YN M+ G +
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ DEAC ++ M+++ P+ Y +L+ L +G+L EA + M E+G +V+
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVA 775
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 114/212 (53%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++++ +L + + + ++ +G P++ Y+ ++ + + G +D+ L
Sbjct: 806 PDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALEL 865
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+EM R P+ TYN LL L K + A LL M++VG P ++ + L+DG+ +
Sbjct: 866 FEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G +D + +F M KG +PDV+ +T +I S +L +A +LFD M +G P+V T
Sbjct: 926 MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
YN +I AGK EA + EM+ +GC P+
Sbjct: 986 YNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 2/278 (0%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T T+ L+ G+ G + V + + P +Y++++ + Q + ++
Sbjct: 562 TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLF 621
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G D+ TY++V+ + +DQ + M G P Y LL L K
Sbjct: 622 DEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKD 681
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVC 187
+K AL + N ++E P + +++GL ++ +D ACK D M N+ +PD+
Sbjct: 682 EKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACK-LVDSMKNQNILPDLFT 740
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT ++ +G LE+A ++F M +G P+V Y S++ GK A + + M
Sbjct: 741 YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C P+ + Y++L+ +L G++ EA+ + + KG
Sbjct: 801 KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKG 838
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
I G ++ LI + G+ G+ + +E F + + P +YN +L L +
Sbjct: 835 ISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRL 894
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ E + ++M G PD++TYNI++ ++G +D+ M G PD T+ L
Sbjct: 895 NVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSL 954
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ LGK DK L A L + M+E G++PSV+ + L+D L RAG + F EM KGC
Sbjct: 955 IESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGC 1014
Query: 182 MPDVVCYTVM 191
MPD + +M
Sbjct: 1015 MPDGITIGIM 1024
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 3/218 (1%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
W QQ +GY+ + TY +++ + D ++L M + G H LL
Sbjct: 171 WAGQQ---DGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTF 227
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
G + AL + N MK G +PS + +++ L + G + F ++ PD
Sbjct: 228 GSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDA 287
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ + + S+ +G L+ A + MI G P V T+ +I +G DEAC
Sbjct: 288 QTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNG 347
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
M++ C+PN + Y TLV+ L AG+L EA EV M E
Sbjct: 348 MKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKE 385
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++ LI + G+ G + F S P Y++++ + ++++M
Sbjct: 810 TYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM 869
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
P+I+TYN ++ + G+L+ +LL+EM + G PD TYNIL+ +GK
Sbjct: 870 QRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMV 929
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEMANKGCMPDVVCYTV 190
A + MKE G P V+ FT+L++ L + L+AC+ FD M +G P VV Y V
Sbjct: 930 DEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACE-LFDSMEEEGYNPSVVTYNV 988
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+I AG++ +A +F M KG +P+ T M R
Sbjct: 989 LIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKR 1026
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQ 69
T+NILI G++G+ + F + K P ++ +++ +L + KL+E ++
Sbjct: 915 TYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVD--KLLEACELFD 972
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M +EGY P ++TYN+++ R GK+ + + EM G PD T I+ +L +
Sbjct: 973 SMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVRE 1032
Query: 130 KPLAAL 135
+ AL
Sbjct: 1033 QQFHAL 1038
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 160/288 (55%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI +G ++NILI C G + + + E +++ P +YN ++ A
Sbjct: 194 MIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCL---PNVVTYNTVIGAYCK 250
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + + M EG P++LTYN+V+ R+G++++ +L EM R GF+PD T
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K AL L + M G P V+ +T+L++ + +AGNL+ FFD+M
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ V YT +I + G +++A ++D MI G P + TYN+++ G C++G+ +
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA +++ ME +G +P+ + Y+T+++ +L A ++ MVEKG
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKG 478
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 155/334 (46%), Gaps = 42/334 (12%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI-EW 66
+++ F++++ +C + K + +KL F P SYNAIL +++ R+ + E
Sbjct: 130 SSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEK 189
Query: 67 VYQQMSDEGYA-----------------------------------PDILTYNIVMCAKY 91
VY++M G + P+++TYN V+ A
Sbjct: 190 VYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYC 249
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
+L ++D+ +LL MG G P+ TYN++++ L + + +L M GF P +
Sbjct: 250 KLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGV 309
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ TL++G + GN EM G PDVV YT +I + AG L +A + FD M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+G PN TY S+I GF G DEA + EM G P + YN L++ +G++
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429
Query: 272 AEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
EA ++R M KG Y +++ F RY+
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 127/239 (53%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +++ L + + + V +M +G+APD +TYN ++ ++G Q L EM
Sbjct: 275 TYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM 334
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R+G PD TY L++ + K A+ + M G P+ + +T+L++G S+ G +
Sbjct: 335 LRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFM 394
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D +DEM G P +V Y ++ + +G +E+A L GM KG P+V +Y+++
Sbjct: 395 DEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTI 454
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GFC + D A M EM +G +P+ + Y++L+ L +L EA ++ + M+ K
Sbjct: 455 IAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 132/281 (46%), Gaps = 6/281 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF T+N L+ C G A + +++ L P +Y ++++ +
Sbjct: 299 MDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGL---PPDVVTYTSLINTMCK 355
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ QM G P+ +TY ++ + G +D+ +R+ DEM RSGF P T
Sbjct: 356 AGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVT 415
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL+ + A+ LL M+ G P V+ ++T++ G R LD EM
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + Y+ +I L +A DLF M+ K LP+ FTY S+I G+C G +
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
EA + EM +G P+ + YN L++ L + EA ++
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLL 576
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 135/284 (47%), Gaps = 22/284 (7%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
A ++ + I+S F P +YNA+L H + G + + + + M +G +PD+++Y
Sbjct: 397 AYRIWDEMIRS---GFPPTIVTYNALLNGHCVSGRMEEAI--GLLRGMEGKGLSPDVVSY 451
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
+ ++ R +LD+ ++ EM G SPD TY+ L+ L + + A +L M
Sbjct: 452 STIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN 511
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P +T+L++G + G+L+ DEM KG +PD V Y V+I +
Sbjct: 512 KSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTRE 571
Query: 204 AQDLFDGMITKGQLPNVFTYNS---------------MIRGFCMAGKFDEACTMMKEMES 248
A+ L + +PN TY++ +I+GFCM G +EA + + M
Sbjct: 572 AKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIK 631
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
R PN VYN ++ G + +AH++ + MV+ G H V+
Sbjct: 632 RNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVT 675
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 140/307 (45%), Gaps = 27/307 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI +GFP T T+N L+ C G + A ++ R ++ K P SY+ I+ G
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL-RGMEGK--GLSPDVVSYSTIIA---G 457
Query: 58 IRQYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+Y+ ++ +Q +M ++G +PD +TY+ ++ +L++ L EM PD
Sbjct: 458 FCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPD 517
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK---- 170
TY L++ K ALNL + M + GF P + + L++GL++ K
Sbjct: 518 EFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLL 577
Query: 171 -YFFDEMANKGCMPDVV---CYTVMITSYIA-------AGELEKAQDLFDGMITKGQLPN 219
F+DE G D + C + S +A G + +A +F+ MI + Q PN
Sbjct: 578 KLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPN 637
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
YN +I G C G +A + KEM G P+ + LV L + G + + VIR
Sbjct: 638 EAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIR 697
Query: 280 HMVEKGK 286
++ K
Sbjct: 698 DILRSCK 704
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 81/207 (39%), Gaps = 33/207 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ GF T+N+LI + R+ +K P +Y+ ++ + I
Sbjct: 544 MIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEF 603
Query: 61 YKLI---------------EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++ + V++ M P+ YN+++ R G + + H+L E
Sbjct: 604 KSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKE 663
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG-LSRA- 163
M GF P HT I+ V K L + + + V D +L L D LS+A
Sbjct: 664 MVDFGFIP--HTVTIIALV-----KALYSEGMDEQLNLVIRD--ILRSCKLSDAELSKAL 714
Query: 164 -------GNLDACKYFFDEMANKGCMP 183
GN+DA EMA G +P
Sbjct: 715 VQINHKEGNIDAVFNLLTEMAKDGFLP 741
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 156/305 (51%), Gaps = 12/305 (3%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVV--ERFIKSKLFNFRPFKNSYNAILHALLG 57
MI P +A FN LI C L V+ +R K F P +YN ++ L
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+Q + + +M++ G +PD++TY+ ++ +LGKLD+ LL+EM + G PD T
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+L+ L K K AL+ L MK G P ++ + TL+DGL +AG +D F +M
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C PDV YT++IT+ +G+ A +F M+ +G LP+ Y+S++ G G D
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
A ++K + C P+F+++ ++ L AGK +A EV+ M + G YI +V
Sbjct: 532 LALELLK---TSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVV 588
Query: 292 SKFKR 296
S ++
Sbjct: 589 SGLRK 593
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 123/232 (53%), Gaps = 4/232 (1%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+L +W+ +Q +GY + TYN + A + + +M R G+ PD TY+I+
Sbjct: 23 RLFDWLGRQ---KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIV 79
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG- 180
L L K + A LL ++E G +V+ ++ ++DG +A +D F M++ G
Sbjct: 80 LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGG 139
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PDVV + ++ + + +A LF+ M G PNV +Y++++ G C AG+ DEAC
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEAC 199
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + C P+ + Y + V+ L A ++AEA + R MV KG V+
Sbjct: 200 RLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 130/330 (39%), Gaps = 91/330 (27%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN L AL +L +QQM GY PD TY+IV+ + G+LD+ LL ++
Sbjct: 40 TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99
Query: 107 GRSGFS------------------------------------PDFHTYNILLHVLGKGDK 130
SG PD T+N LL L G++
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGER 159
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L +M + G +P+V+ ++TL+DGL +AG LD ++EM K C+PD+V YT
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTY-----------------NSMIRGFCMA 233
+T A + +A D M+TKG + + N MI C +
Sbjct: 220 FVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRS 279
Query: 234 GKFDEACTMMKEMESRG--------------------------------------CNPNF 255
G DEAC +EM SR C PN
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN +V NL A +L EA E++ M G
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYG 369
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 2/212 (0%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
Y +V LGK+ RL D +GR G+ TYN L L K + A M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ G+ P ++ ++ GL +AG LD K ++ G +V+ Y+V+I A +
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 202 EKAQDLFDGMITKGQ-LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A ++F M + G +P+V T+NS+++G C + EA + + M GC PN + Y+T
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L+ L AG+L EA + MVEK LV+
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVA 216
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 3/194 (1%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK-PLAAL--NLLNHMKEVGFDP 148
R G LD+ + +EM P +N L+H + K + P L + MKE P
Sbjct: 278 RSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPP 337
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ + ++D L +A LD + +EMAN G PDVV Y+ ++ G+L++A DL
Sbjct: 338 NLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M +G P+ FT S++ AGK D A + ++ M++RG P+ + YNTL+ L A
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKA 457
Query: 269 GKLAEAHEVIRHMV 282
G++ EA + MV
Sbjct: 458 GRIDEAITFLAKMV 471
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 40/245 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++ L+ C G++ A ++E K +F P + +IL+AL
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF---PDSFTDASILNALSK 421
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD++TYN ++ + G++D+ L +M + +PD +
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR--------------- 162
Y I++ L + + A + M + G P + + +L+DGL+R
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541
Query: 163 -----------------AGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
AG DAC+ + MA+ G D Y +++ G+++KA
Sbjct: 542 CKPDFVMHKMVLDGLCKAGKAEDACE-VVERMADAGFPADAFTYISVVSGLRKLGKVDKA 600
Query: 205 QDLFD 209
+ L D
Sbjct: 601 RQLVD 605
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 9/170 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L+ C G + A + + + +K P SY I+ AL Q ++
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKC---TPDVFSYTIIITALCRSGQAAGAHAIF 502
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+M G PD + Y+ ++ R G D LL S PDF + ++L L K
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKMVLDGLCKA 559
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
K A ++ M + GF + +++ GL + G +D + D+ +
Sbjct: 560 GKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASE 609
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 138/250 (55%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y +L +L ++++ V++ M+ +G +P++ +Y+I++ R K+D+ L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+EM G P+ TY LL L K K A++L + M G P + + L+DG S+
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G++ F+EM KGC+P V Y +++ + GE + Q LF M+ +G +PN+FT
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N+++ GFC G EA + EM S GC P+ + YNTL+ + + GK EA ++R M+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMI 289
Query: 283 EKGKYIHLVS 292
G +VS
Sbjct: 290 RSGVGPDIVS 299
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 123/246 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +L L + + Y M G P+ TY ++ + + + ++ + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SP+ +Y+IL+ L +G K A LLN M + G P+V+ + +L+ GL + G L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F M +GC PD V Y V+I + G++ +A LF+ M+ KG +P VFTYNS+
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ GF G+F ++ K+M +GC PN +N L+ G + EAH + M G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 287 YIHLVS 292
+VS
Sbjct: 259 PPDVVS 264
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P +N+LI G++G A ++ E ++ P +YN++L
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI---PTVFTYNSLLSGFSR 204
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ +++ M +G P+I T+N ++ ++G + + HRL EM G PD +
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + KP A LL M G P ++ + L+DG S++G LD F E+
Sbjct: 265 YNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD Y+ +I AG++ A +F MI G P+ ++ G C +
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E+C + + M C P YN L+ L A + + E+ + E+G
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+W Q+ Y L+YN ++ + G+ D + ++M +G P+ +TY LL
Sbjct: 5 QWAGSQVH---YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRS 61
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + + A ++ M G P+V ++ L+ GL R +D +EM + G P+
Sbjct: 62 LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y +++ G+L++A DLF M+ +G P+ YN +I GF G EA + +
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM +GC P YN+L+S G+ + + M+ +G
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 125/274 (45%), Gaps = 12/274 (4%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T T+N L+ GE G + + + ++ P ++N +L
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV---PNIFTFNNLLDGFCK 239
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ ++ +M G PD+++YN + MC+K GK + RLL EM RSG PD
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSK---GKPHEAQRLLREMIRSGVGPD 296
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+YNIL+ K A+ L + + G +P ++T++D L RAG + A F
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M G PD ++ L ++ +LF M+ +P + YN ++ C A
Sbjct: 357 DMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAK 416
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ D+ C + E+ RG +P+ + ++ LR +
Sbjct: 417 RSDDVCEIFHELTERGFSPDVEISKVILETLRRS 450
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TFN L+ C G++ A ++ F++ + P SYN ++ +
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL---FLEMRSLGCPPDVVSYNTLIRGMCS 274
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M G PDI++YNI++ + G LD +L E+ +SG PD +
Sbjct: 275 KGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS 334
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF---- 172
Y+ ++ L + K AA + M G P L+ GL R L ++C+ F
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Query: 173 ------------------------------FDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F E+ +G PDV V++ + + + +
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKD 454
Query: 203 KAQ 205
A+
Sbjct: 455 AAE 457
>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 755
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 146/296 (49%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G A +FN I C + G ++ +E + +P SYN+ + A Q+++
Sbjct: 385 GLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMA 444
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +QM +G P++++ NI + A G+ + LL +M G +P+ TYN +
Sbjct: 445 LELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKT 504
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GKG + AL+LL MKE+ P + + + + S+ G EM +G PD
Sbjct: 505 CGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPD 564
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ YT I +Y G+ E+A +L M TKG PNV TYNS+I+ G++++A ++K
Sbjct: 565 VISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLK 624
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
E++ P+ + YN +S G+ EA +++R M +G ++S + C
Sbjct: 625 ELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRAC 680
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 128/283 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G A T+N +I CG+ G ++ + + P SYN + A +
Sbjct: 241 MPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGR 300
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K V +QM +G PD+++Y+ + A G+ + LLDEM G +P+ +N
Sbjct: 301 WKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNS 360
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ GKG + A+ LL + +G P F + + +++G EM K
Sbjct: 361 AIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKR 420
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + Y I + G+ E A +L M TKG PNV + N IR G++ E
Sbjct: 421 LKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGL 480
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++++M ++G PN + YN+ + G+ +A +++ M E
Sbjct: 481 ELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKE 523
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 135/295 (45%), Gaps = 14/295 (4%)
Query: 13 FNILICTCGE-------VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
+N I CG V L R++ +R + P + SYN+ + A Q++ +
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADREVV-------PDEISYNSAIKACGRGGQWERVI 235
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ ++M G PD +TYN V+ + G+ + +L EM G +P+ +YN+ +
Sbjct: 236 GLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRAC 295
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
G+ + A+ +L M+ G P V+ + + G + DEMA +G P+
Sbjct: 296 GRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNT 355
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ + I + G+ EKA +L + G P+ ++NS I +G++ EA ++KE
Sbjct: 356 IHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKE 415
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
M ++ P+ + YN+ + G+ A E+ R M KG +++S + C
Sbjct: 416 MPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRAC 470
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 130/289 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++N I CG G +V+ + P +YN+++ Q+K V +M
Sbjct: 217 SYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEM 276
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
S +G P+ ++YN+ + A R G+ + +L +M G +PD +Y+ + G G +
Sbjct: 277 SAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQW 336
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+++LL+ M G P+ +HF + + + G + E+ G PD +
Sbjct: 337 ETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSA 396
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + +G ++A +L M K P+ +YNS I G+++ A + ++M ++G
Sbjct: 397 IAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGL 456
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
PN + N + G+ E E++R M +G ++++ K C
Sbjct: 457 TPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTC 505
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 125/270 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N I TCG+ G K ++ K K P +YN+ + A +
Sbjct: 486 MPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGR 545
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + ++M +G PD+++Y + A + G+ ++ LL +M G +P+ TYN
Sbjct: 546 WKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNS 605
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ G+G + AL+LL +KE P ++ + + + G + EM +G
Sbjct: 606 VIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEG 665
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ YT I + A GE EKA L + M G P +Y+ I G+ +EA
Sbjct: 666 LTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAV 725
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+++EM RG + + + +V L + K
Sbjct: 726 CLVREMAQRGLSHRNISNSLIVEALGDDAK 755
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 133/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G ++N+ I CG G ++ VE + + P SY+A + A G Q
Sbjct: 276 MSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQ 335
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M+ G AP+ + +N + A + G+ ++ LL E+ G +PD ++N
Sbjct: 336 WETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNS 395
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ K + AL LL M P + + + ++ + G + +M KG
Sbjct: 396 AIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKG 455
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V+ + I + G ++ +L M +G PNV TYNS I+ G++++A
Sbjct: 456 LTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKAL 515
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ +M+ P+ + YN+ ++ G+ EA ++R M +G ++S
Sbjct: 516 DLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVIS 567
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 126/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G + NI I CGE G ++ +E + P +YN+ + Q
Sbjct: 451 MPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQ 510
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M + PD +TYN + A + G+ + LL EM G +PD +Y
Sbjct: 511 WEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTA 570
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ GK + A+ LL M G P+V+ + +++ R G + E+
Sbjct: 571 AIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETA 630
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD++ Y + I++ G E+A DL M +G P+V +Y S IR G++++A
Sbjct: 631 VAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKAL 690
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ M + G +P Y+ + G+ EA ++R M ++G
Sbjct: 691 GLLNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRG 735
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 125/280 (44%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
FN I CG+ G K VE + P S+N+ + A ++K + ++M
Sbjct: 358 FNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMP 417
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ PD ++YN + A + G+ + L +M G +P+ + NI + G+ +
Sbjct: 418 AKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQ 477
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
L LL M G P+V+ + + + + G + +M PD + Y I
Sbjct: 478 EGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAI 537
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G ++A L M +G P+V +Y + I + G+++ A ++++M ++G
Sbjct: 538 AACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLT 597
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN + YN+++ G+ +A ++++ + E L+S
Sbjct: 598 PNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMS 637
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-GFDPSVLH 152
GK + +LDEM G H+Y + G+ + AL LL + E G P+V
Sbjct: 124 GKWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFC 182
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ + ++ + EMA++ +PD + Y I + G+ E+ L M
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMP 242
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ G P+ TYNS+I G G++ EA +++ EM ++G P + YN + +G+
Sbjct: 243 SVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWK 302
Query: 273 EAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
EA EV+R M +G ++S K C
Sbjct: 303 EAVEVLRQMESQGVTPDVISYDAAIKAC 330
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 148/283 (52%), Gaps = 7/283 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E F +++ILI C E+G A K+ ++ I N P +YNA L+ L+
Sbjct: 475 ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMID---LNCVPNVTTYNAFLNGLMRKG 531
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + VY++M G +PD++TY+ ++ K DQ H L + M G P+ TYN
Sbjct: 532 RIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYN 591
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LLH L K KP A L M E G DP + +TTL+ G G ++ FDEM +K
Sbjct: 592 CLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 651
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PDVV Y ++ + AG+ +A+ LF M+++ P+ ++N MI G A + D+A
Sbjct: 652 GHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDA 711
Query: 240 CTMMKEMES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + ME GC+P+ + YN+L+ L +L+EA +V + +
Sbjct: 712 VEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 754
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 38/322 (11%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
++ ++ +++LI E G K E ++ N +P + ++++ L +
Sbjct: 331 MQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRV 390
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS------------ 109
+ + M GY PD+ T+++++ + K+ + L M R
Sbjct: 391 DSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYN 450
Query: 110 --------------------------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
F PD +Y+IL+ K D+ A L M +
Sbjct: 451 SLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMID 510
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
+ P+V + ++GL R G + + ++EM GC PDV+ Y+ +I + A + ++
Sbjct: 511 LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQ 570
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A +LF+ MI++G PN TYN ++ G C K DEA + ++M RGC+P+ + Y TL+
Sbjct: 571 AHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLY 630
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
N GK+ +A EV MV KG
Sbjct: 631 GFCNVGKIEQAVEVFDEMVSKG 652
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 148/288 (51%), Gaps = 5/288 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G+ T ++LI C ++ A++ ++ + K+ + SYN++L++L
Sbjct: 400 MIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG-MDRKISSRSSSCFSYNSLLNSLCK 458
Query: 58 IRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
++ ++ M S+ + PD+++Y+I++ ++ +L + +L +M P+
Sbjct: 459 AKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVT 518
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ L + + A + M G P V+ ++TL+ G S A D F+ M
Sbjct: 519 TYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETM 578
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++GC P+ V Y ++ + ++A +LF M+ +G P+ TY +++ GFC GK
Sbjct: 579 ISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKI 638
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++A + EM S+G +P+ + YN L+ AGK EA ++ + MV +
Sbjct: 639 EQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSR 686
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 14/252 (5%)
Query: 32 RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKY 91
R+++++ F F +YN +L L+ R K V+++M +G P+ TY +++ +
Sbjct: 118 RWLQARNFKHDVF--TYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSC 175
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH--MKEVGFDPS 149
D+ R EM GF P Y + L K + K V +
Sbjct: 176 YERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVE-M 234
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+L L++ + + ++A K F M GC PD Y+ M+ ++ L++A LF
Sbjct: 235 MLKKALLVNFVIQDKAIEASK-LFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFL 293
Query: 210 GMITKGQLP-NVFTYNSMIRGFCMAGKFD---EACTMMKEMESRGCNPNFLVYNTLVSNL 265
M + + P N + + + G C +GK + EAC M+E S P VY+ L+ L
Sbjct: 294 EMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSS-QP---VYDMLIRLL 349
Query: 266 RNAGKLAEAHEV 277
+G++ +A E
Sbjct: 350 IESGRIDKAEEA 361
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 1/217 (0%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ + + D+ TYN ++ R L Q ++ ++M G P+ TY +L+
Sbjct: 117 FRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCY 176
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A+ M + GF PS + + + L G F K +++
Sbjct: 177 ERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMML 236
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
++ +++ + +A LF M+ G P+ Y+ M+ C DEA + EM
Sbjct: 237 KKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMA 296
Query: 248 SRGCNP-NFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
P N + + +S L +GK+ +A E R M E
Sbjct: 297 VESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQE 333
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 57/122 (46%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
FF + + DV Y ++ I +L++A +F+ M+ +G +PN FTY +++ C
Sbjct: 116 FFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSC 175
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
DEA EM +G P+ +Y + L+ GK E V +EK + ++
Sbjct: 176 YERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMM 235
Query: 292 SK 293
K
Sbjct: 236 LK 237
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G +N L+ G+ G A+++ + + + +P S+N ++ L
Sbjct: 648 MVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQC---KPDTVSHNIMIDGLSK 704
Query: 58 IRQYKLIEWVYQQM-SDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSP 113
++ V+++M D G +PD++TYN + +C + RL + ++ E+ R SP
Sbjct: 705 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS---EAMKVFKEIDRLKLSP 761
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGN 165
D H +N+LL + G + + E+ F DP F LM+ + AG+
Sbjct: 762 DPHAFNVLLEAIKCG---------IVYQFEIRFKDPPA--FNVLMEAMHAAGH 803
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL ++ F V + L+D L R +L F++M +G +P+ Y V++
Sbjct: 113 ALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQ 172
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM-KEMESRGCN 252
S ++A F M+ KG P+ Y + GK E + +++E R
Sbjct: 173 SSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKR-VA 231
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ L+ N K EA ++ R MV+ G
Sbjct: 232 VEMMLKKALLVNFVIQDKAIEASKLFRAMVKSG 264
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 146/285 (51%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ T+N ++ +G + + F + P +YN +L AL +
Sbjct: 175 MASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGK 234
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++ + +GY PD +TYN ++ R +D+ + +M SG +P+ TY+I
Sbjct: 235 TDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSI 294
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L + K A +L M ++G P V+ + L+DGL + +D F M + G
Sbjct: 295 VLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 354
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+V Y+V++ ++ A+ LFD MI + +P+V T+N ++ G C AGK DEA
Sbjct: 355 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 414
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M GC P+++ YNTL++ LR G+ +A + + M EKG
Sbjct: 415 DLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 135/246 (54%), Gaps = 5/246 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P + ++ +L + +Q KL + +++QM D G +PD + YNI++ + G++D+ +
Sbjct: 6 PNRYTFRVVLKSF--CKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
RL +EM G P +TYN LL+ K K A+ L M E GF+P V+ ++T++ GL
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 161 SRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ G + +A + F +M +GC + V Y +I +E+A L + M +KG +P+
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYN+++ G C GK EA M SRG +P+ + YN L+ L GK EA ++ +
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243
Query: 280 HMVEKG 285
++ KG
Sbjct: 244 DVIAKG 249
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 148/296 (50%), Gaps = 23/296 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA-----RKVVERFIKSKLFNFRPFKNSYNAIL 52
M E GF T++ +I C G+V A K++ER + +YNA++
Sbjct: 104 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTV-------AYNALI 156
Query: 53 HALLGI----RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+ L R YKL+E +M+ +GY PD +TYN ++ R+GK+ + + D M
Sbjct: 157 NGLCKDENIERAYKLLE----EMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPS 212
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G+SPD YN LL L K K A+ L + G+ P + + +++ GL+R N+D
Sbjct: 213 RGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 272
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ F +M GC P+ Y+++++ + A +++ A + + M G +P+V TYN ++
Sbjct: 273 AEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 332
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G C D+A + M GC P+ + Y+ +++ L K+ +A + M+E+
Sbjct: 333 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 152/331 (45%), Gaps = 42/331 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG +NILI G V A ++ E + L P +YN++L+A
Sbjct: 34 MLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGL---EPSIYTYNSLLNAFCK 90
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-----FHR----------- 101
+ K +++ M+++G+ PD++TY+ ++ + GK+ + FH+
Sbjct: 91 ETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTV 150
Query: 102 --------------------LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
LL+EM G+ PD TYN +L L + K A + M
Sbjct: 151 AYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSM 210
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G+ P V+ + L+D L + G D F ++ KG MPD V Y ++ +
Sbjct: 211 PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 270
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A+++F M+ G PN TY+ ++ G C A K D+A +++EM G P+ + YN L
Sbjct: 271 DEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNIL 330
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ L + +AHE+ MV+ G +VS
Sbjct: 331 LDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 361
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 111/210 (52%), Gaps = 1/210 (0%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P+ T+ +V+ + + GKL ++L ++M +G SPD YNIL+ K + A
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M VG +PS+ + +L++ + + F MA KG PDVV Y+ +I+
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 197 AAGELEKAQD-LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G++ +A + LF MI +G N YN++I G C + A +++EM S+G P+
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNT++S L GK++EA + M +G
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRG 214
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 10/226 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARK-----VVERFIKSKLFNFRPFKNSYNAILHAL 55
+I G+ T+N ++ +GLARK E F K P +Y+ +L
Sbjct: 245 VIAKGYMPDTVTYNSIL-----LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGH 299
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ V ++MS G PD++TYNI++ + +D+ H L M +G +PD
Sbjct: 300 CRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 359
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+Y+++L+ L K +K A L + M E P V+ F LMDGL +AG LD K D+
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQ 419
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
M GC PD V Y ++ G +A L M KG L + F
Sbjct: 420 MTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + V++ S+ G+L LF+ M+ G P+ YN +I G+ G+ DEA
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM S G P+ YN+L++ K+ EA E+ + M EKG
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG 108
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 156/305 (51%), Gaps = 12/305 (3%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVV--ERFIKSKLFNFRPFKNSYNAILHALLG 57
MI P +A FN LI C L V+ +R K F P +YN ++ L
Sbjct: 292 MISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCK 351
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+Q + + +M++ G +PD++TY+ ++ +LGKLD+ LL+EM + G PD T
Sbjct: 352 AKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+L+ L K K AL+ L MK G P ++ + TL+DGL +AG +D F +M
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMV 471
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C PDV YT++IT+ +G+ A +F M+ +G LP+ Y+S++ G G D
Sbjct: 472 AAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLED 531
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
A ++K + C P+F+++ +V L AGK +A EV+ M + G YI++V
Sbjct: 532 LALELLK---TSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVV 588
Query: 292 SKFKR 296
++
Sbjct: 589 RGLRK 593
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 122/232 (52%), Gaps = 4/232 (1%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+L +W+ +Q +GY + TYN + A + + +M R G+ PD TY+I+
Sbjct: 23 RLFDWLGRQ---KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIV 79
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM-ANKG 180
L L K + A LL ++E G +V+ ++ ++DG +A +D F M A G
Sbjct: 80 LRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGG 139
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PDVV + ++ + + +A LF+ M G PNV +Y++++ G C AG+ DEAC
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEAC 199
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + C P+ + Y + V+ L A ++AEA + R MV KG V+
Sbjct: 200 RLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 130/330 (39%), Gaps = 91/330 (27%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN L AL +L +QQM GY PD TY+IV+ + G+LD+ LL ++
Sbjct: 40 TYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQL 99
Query: 107 GRSGFS------------------------------------PDFHTYNILLHVLGKGDK 130
SG PD T+N LL L G++
Sbjct: 100 RESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGER 159
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L +M + G +P+V+ ++TL+DGL +AG LD ++EM K C+PD+V YT
Sbjct: 160 MSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTS 219
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTY-----------------NSMIRGFCMA 233
+T A + +A D M+TKG + + N MI C +
Sbjct: 220 FVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRS 279
Query: 234 GKFDEACTMMKEMESRG--------------------------------------CNPNF 255
G DEAC +EM SR C PN
Sbjct: 280 GMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN +V NL A +L EA E++ M G
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYG 369
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 104/212 (49%), Gaps = 2/212 (0%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
Y +V LGK+ RL D +GR G+ TYN L L K + A M
Sbjct: 5 YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ G+ P ++ ++ GL +AG LD K ++ G +V+ Y+V+I A +
Sbjct: 65 QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124
Query: 202 EKAQDLFDGMITKGQ-LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A ++F M G +P+V T+NS+++G C + EA + + M GC PN + Y+T
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L+ L AG+L EA + MVEK LV+
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVA 216
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 146/347 (42%), Gaps = 58/347 (16%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALLGIRQY 61
E+G T++++I C + +E F S P ++N++L L +
Sbjct: 101 ESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERM 160
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+++ M+ G P++++Y+ ++ + G+LD+ RL +EM PD Y
Sbjct: 161 SEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSF 220
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT-----------------LMDGLSRAG 164
+ L K ++ A + M G + F+T +++ L R+G
Sbjct: 221 VTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG 280
Query: 165 NLD-ACKYFFDEMANKG--------------------------------------CMPDV 185
LD ACK F +EM ++ C P++
Sbjct: 281 MLDEACKTF-EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNL 339
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y +M+ + A +L++AQ+L + M G P+V TY++++ G C GK D AC +++E
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEE 399
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M G P+ ++++ L AGK+ A + M +G LV+
Sbjct: 400 MSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVT 446
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 100/245 (40%), Gaps = 40/245 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++ L+ C G++ A ++E K +F P + +IL+AL
Sbjct: 365 MANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVF---PDSFTDASILNALSK 421
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD++TYN ++ + G++D+ L +M + +PD +
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR--------------- 162
Y I++ L + + A + M + G P + + +L+DGL+R
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541
Query: 163 -----------------AGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
AG DAC+ + MA+ G D Y ++ G+++KA
Sbjct: 542 CKPDFVMHKMVVDGLCKAGKAEDACE-VVERMADAGFPADAFTYINVVRGLRKLGKVDKA 600
Query: 205 QDLFD 209
+ L D
Sbjct: 601 RQLVD 605
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L+ C G + A + + + +K P SY I+ AL Q ++
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKC---TPDVFSYTIIITALCRSGQAAGAHAIF 502
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+M G PD + Y+ ++ R G D LL S PDF + +++ L K
Sbjct: 503 QEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLK---TSLCKPDFVMHKMVVDGLCKA 559
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
K A ++ M + GF + ++ GL + G +D + D+ +
Sbjct: 560 GKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASE 609
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 144/279 (51%), Gaps = 1/279 (0%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ-YKLIEW 66
+++ F++++ +C V L K + +K + F P SYNAIL A++ +Q K+ E
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M + G +P++ TYNI++ G L+ EM R+G P+ TYN ++
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A LL M G +P+++ + +++GL R G + +EM+ + +PD V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I Y G +A L M+ G PNV TY ++I C AG + A + +M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG +PN Y TL+ G L +A+++++ MVE G
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 152/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+NILI CT G + + ++ P +YN I+ A
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCL---PNVVTYNTIIDAYCK 250
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+R+ + + M+ +G P++++YN+V+ R G++ + +L+EM + + PD T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ AL L M + G P+V+ +TTL++ + +AGNL+ F D+M
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P+ YT +I + G L++A + M+ G P + TYN++I G C+ G+ +
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++EM RG P+ + Y+T++S +L +A ++ MV KG
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 21/303 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG T+ LI + + G + +E + + P +Y ++ G Q
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID---GFSQ 390
Query: 61 YKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ YQ +M + G+ P I+TYN ++ LG+++ LL EM GF PD +
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ ++ + + A L M G P V +++L+ GL + L F EM
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD V YT +I +Y G+L+KA L D MI KG P++ TYN +I GF +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRN---------------AGKLAEAHEVIRHMV 282
EA ++ ++ PN + YNTL+ N N G + EA V+ M+
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630
Query: 283 EKG 285
+KG
Sbjct: 631 QKG 633
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 19/309 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
M + G RT+ LI + G ++ + + F P +YNA++ H +LG
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG- 427
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + Q+M + G+ PD+++Y+ ++ R +L++ +L EM G SPD TY
Sbjct: 428 -RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L+ L K + +L M +G P + +T+L++ G+LD DEM
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI----------- 227
KG PD+V Y V+I + ++A+ L ++ + +PN TYN++I
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606
Query: 228 ----RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+GFCM G +EA +++ M +G N VYN ++ G + +A+ + + M+
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666
Query: 284 KGKYIHLVS 292
G H V+
Sbjct: 667 SGFAPHSVT 675
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 17/199 (8%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL-------- 52
MI+ GF T+N+LI + ++ +K P + +YN ++
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603
Query: 53 -HALLGIRQYKL------IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
AL ++ + + + V + M +GY + YN+++ ++G +++ + L E
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH-MKEVGFDPSVLHFTTLMDGLSRAG 164
M SGF+P T L L K + LL++ +K + L L+ S+ G
Sbjct: 664 MLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALA-KVLIGINSKEG 722
Query: 165 NLDACKYFFDEMANKGCMP 183
N+DA +MA G +P
Sbjct: 723 NMDAVFNVLKDMALSGLLP 741
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 138/250 (55%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y +L +L ++++ V++ M+ +G +P++ +Y+I++ R K+D+ L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+EM G P+ TY LL L K K A++L + M G P + + L+DG S+
Sbjct: 110 LNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSK 169
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G++ F+EM KGC+P V Y +++ + GE + Q LF M+ +G +PN+FT
Sbjct: 170 KGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFT 229
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N+++ GFC G EA + EM S GC P+ + YNTL+ + + GK EA ++R M+
Sbjct: 230 FNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMI 289
Query: 283 EKGKYIHLVS 292
G +VS
Sbjct: 290 RSGVGPDIVS 299
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 123/246 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +L L + + Y M G P+ TY ++ + + + ++ + M
Sbjct: 19 SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SP+ +Y+IL+ L +G K A LLN M + G P+V+ + +L+ GL + G L
Sbjct: 79 AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F M +GC PD V Y V+I + G++ +A LF+ M+ KG +P VFTYNS+
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ GF G+F ++ K+M +GC PN +N L+ G + EAH + M G
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258
Query: 287 YIHLVS 292
+VS
Sbjct: 259 PPDVVS 264
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P +N+LI G++G A ++ E ++ P +YN++L
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI---PTVFTYNSLLSGFSR 204
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ +++ M +G P+I T+N ++ ++G + + HRL EM G PD +
Sbjct: 205 KGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVS 264
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + KP A LL M G P ++ + L+DG S++G LD F E+
Sbjct: 265 YNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIP 324
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD Y+ +I AG++ A +F MI G P+ ++ G C +
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E+C + + M C P YN L+ L A + + E+ + E+G
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERG 432
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 107/221 (48%), Gaps = 3/221 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+W Q+ Y L+YN ++ + G+ D + ++M +G P+ +TY LL
Sbjct: 5 QWAGSQVH---YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRS 61
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + + A ++ M G P+V ++ L+ GL R +D +EM + G P+
Sbjct: 62 LCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPN 121
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y +++ G+L++A DLF M+ +G P+ YN +I GF G EA + +
Sbjct: 122 VVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFE 181
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM +GC P YN+L+S G+ + + M+ +G
Sbjct: 182 EMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG 222
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 122/271 (45%), Gaps = 6/271 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T T+N L+ GE G + + + ++ P ++N +L
Sbjct: 183 MLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCV---PNIFTFNNLLDGFCK 239
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M G PD+++YN +M GK + RLL EM RSG PD +
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ K A+ L + + G +P ++T++D L RAG + A F +M
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD ++ L ++ +LF M+ +P + YN ++ C A + D
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSD 419
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ C + E+ RG +P+ + ++ LR +
Sbjct: 420 DVCEIFHELTERGFSPDVEISKVILETLRRS 450
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TFN L+ C G++ A ++ F++ + P SYN ++ +
Sbjct: 218 MLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL---FLEMRSLGCPPDVVSYNTLMRGMCS 274
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M G PDI++YNI++ + G LD +L E+ +SG PD +
Sbjct: 275 KGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFS 334
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF---- 172
Y+ ++ L + K AA + M G P L+ GL R L ++C+ F
Sbjct: 335 YSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Query: 173 ------------------------------FDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F E+ +G PDV V++ + + + E
Sbjct: 395 KFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKE 454
Query: 203 KAQ 205
A+
Sbjct: 455 AAE 457
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 149/295 (50%), Gaps = 7/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN--SYNAILHALLGI 58
M++ G A T+NILI G+ G + + KS R F N +YN++L +L
Sbjct: 196 MVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKS-----RSFTNEVTYNSLLSSLGRK 250
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + ++ QM +G + LTY I++ G+++ +L EM + D T
Sbjct: 251 GDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTI 310
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N +L L K + AA L MK G + + + L++GL RAG LDA EM
Sbjct: 311 NNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEE 370
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC P+++ Y +I+SY L A LF M +G PNV +Y+S+I GF AG+ D
Sbjct: 371 NGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDA 430
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
A ++ +EM++ GC PN + YN L+ L AG+ A E +R M + G + V+K
Sbjct: 431 AISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTK 485
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 140/324 (43%), Gaps = 32/324 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ F TFNILI + + + F N P +Y ++ +L I +
Sbjct: 91 MLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGR 150
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +++ M+ +G P++ TY+ VM A G++D+ + +M + G PD TYNI
Sbjct: 151 IDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNI 210
Query: 121 LLHVLGKGDKPLAA--------------------------------LNLLNHMKEVGFDP 148
L+ GK + A + L MK G
Sbjct: 211 LIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVS 270
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ L + L++ L AG ++ + EM + D+V ++ AG +E A +LF
Sbjct: 271 NELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELF 330
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M KG + TYN +I G AGK D A ++ EME GC PN + YNTL+S+
Sbjct: 331 QDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKW 390
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
L+ A + M E+G ++VS
Sbjct: 391 SNLSAATRLFLEMKERGVAPNVVS 414
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T T+N L+ + G G + ++E F + K + +Y ++ L + + + +
Sbjct: 235 TNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQL 294
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y +M D DI+T N V+ + G+++ L +M G + D TYNIL++ LG+
Sbjct: 295 YLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGR 354
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K AA LL M+E G P+++ + TL+ + NL A F EM +G P+VV
Sbjct: 355 AGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVS 414
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ +I + AG + A LF M +G PN TYN +I AG+F A ++EM
Sbjct: 415 YSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMR 474
Query: 248 SRGCNPNFLVYNTLV 262
GC + + LV
Sbjct: 475 DAGCQMGKVTKSLLV 489
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 7/273 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEWVYQQ 70
FN LI GE + K ++ RP +Y++++ + G Q L+ +Y+Q
Sbjct: 33 FNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSMIQVFMKGGDVQNGLL--MYKQ 90
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M + PD T+NI++ + + ++++ + +M + SPD +TY IL+ LG +
Sbjct: 91 MLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSLGTIGR 150
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A + L M G P++ + ++M AG +D F +M KG PD V Y +
Sbjct: 151 IDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNI 210
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I ++ G+LE+A FD + N TYNS++ G + +M+++G
Sbjct: 211 LIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKG 267
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N L Y L+ L AG++ + ++ MV+
Sbjct: 268 LVSNELTYAILIERLGWAGRVEDVWQLYLEMVD 300
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 3/249 (1%)
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+L L R+Y ++ + + M + D +N ++ +++ + L + G
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
P +TY+ ++ V KG L + M + F P F L+D L++A ++
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEAC 120
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F +M PDV YT++I S G ++ LF+ M +G PN+FTY+S++ F
Sbjct: 121 NVFGDMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAF 180
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI---RHMVEKGKY 287
AG+ DEAC + ++M +G P+ + YN L+ G+L A + + R + Y
Sbjct: 181 GSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTY 240
Query: 288 IHLVSKFKR 296
L+S R
Sbjct: 241 NSLLSSLGR 249
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 144/279 (51%), Gaps = 1/279 (0%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ-YKLIEW 66
+++ F++++ +C V L K + +K + F P SYNAIL A++ +Q K+ E
Sbjct: 130 SSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEG 189
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M + G +P++ TYNI++ G L+ EM R+G P+ TYN ++
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A LL M G +P+++ + +++GL R G + +EM+ + +PD V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I Y G +A L M+ G PNV TY ++I C AG + A + +M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG +PN Y TL+ G L +A+++++ MVE G
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENG 408
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 152/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+NILI CT G + + ++ P +YN I+ A
Sbjct: 194 MVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCL---PNVVTYNTIIDAYCK 250
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+R+ + + M+ +G P++++YN+V+ R G++ + +L+EM + + PD T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ AL L M + G P+V+ +TTL++ + +AGNL+ F D+M
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P+ YT +I + G L++A + M+ G P + TYN++I G C+ G+ +
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME 430
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++EM RG P+ + Y+T++S +L +A ++ MV KG
Sbjct: 431 DASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 140/303 (46%), Gaps = 21/303 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG T+ LI + + G + +E + + P +Y ++ G Q
Sbjct: 334 MVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLID---GFSQ 390
Query: 61 YKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ YQ +M + G+ P I+TYN ++ LG+++ LL EM GF PD +
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ ++ + + A L M G P V +++L+ GL + L F EM
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD V YT +I +Y G+L+KA L D MI KG P++ TYN +I GF +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRN---------------AGKLAEAHEVIRHMV 282
EA ++ ++ PN + YNTL+ N N G + EA V+ M+
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630
Query: 283 EKG 285
+KG
Sbjct: 631 QKG 633
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 19/309 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
M + G RT+ LI + G ++ + + F P +YNA++ H +LG
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILG- 427
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + Q+M + G+ PD+++Y+ ++ R +L++ +L EM G SPD TY
Sbjct: 428 -RMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L+ L K + +L M +G P + +T+L++ G+LD DEM
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI----------- 227
KG PD+V Y V+I + ++A+ L ++ + +PN TYN++I
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSA 606
Query: 228 ----RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+GFCM G +EA +++ M +G N VYN ++ G + +A+ + + M+
Sbjct: 607 LALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLH 666
Query: 284 KGKYIHLVS 292
G H V+
Sbjct: 667 SGFAPHSVT 675
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 85/199 (42%), Gaps = 17/199 (8%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL-------- 52
MI+ GF T+N+LI + ++ +K P + +YN ++
Sbjct: 544 MIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEF 603
Query: 53 -HALLGIRQYKL------IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
AL ++ + + + V + M +GY + YN+++ ++G +++ + L E
Sbjct: 604 KSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKE 663
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH-MKEVGFDPSVLHFTTLMDGLSRAG 164
M SGF+P T L L K + LL++ +K + L L+ S+ G
Sbjct: 664 MLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAALA-KVLIGINSKEG 722
Query: 165 NLDACKYFFDEMANKGCMP 183
N+DA +MA G +P
Sbjct: 723 NMDAVFNVLKDMALSGLLP 741
>gi|422293946|gb|EKU21246.1| hypothetical protein NGA_2092600 [Nannochloropsis gaditana CCMP526]
Length = 659
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 139/291 (47%), Gaps = 1/291 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
++GF ++N I CG G+ + E + + + RP SYN ++ A Q+K
Sbjct: 289 DHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWK 348
Query: 63 L-IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+E + + G PD+++YN M + G+ ++ LL E G PD +YN +
Sbjct: 349 AALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTV 408
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H G+ + L AL+L M+EVG P + F T M +RA A EM +
Sbjct: 409 MHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSI 468
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+V YT+ + + AGE E+A +L + M +G NV TY + + C G D
Sbjct: 469 APNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLV 528
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++EM+ +G PN + Y + + GK A V+ MV++G + VS
Sbjct: 529 LLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVS 579
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 134/274 (48%), Gaps = 1/274 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F + I CG+ R+ + + + RP S+N + AL QY L ++ ++
Sbjct: 229 FTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELFTEIE 288
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D G+AP++++YN + A R G +D+ H LL EM PD +YN ++ K ++
Sbjct: 289 DHGFAPNLVSYNTAIHACGRAGMVDRAHELLREMQGLSVRPDSVSYNTVMAAFAKKNQWK 348
Query: 133 AALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AAL LL MKE G DP ++ + T M ++AG + E +G PDVV Y +
Sbjct: 349 AALELLAEMKEAPGVDPDLISYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTV 408
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + AGE +A DLF M G P+ ++N+ + A K+ A +++EME+R
Sbjct: 409 MHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSI 468
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN Y V AG+ A E++ M +G
Sbjct: 469 APNVKSYTIAVDACGRAGEWERALELMEEMEVRG 502
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 102/223 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++N + C + G + E ++ +P SYN ++HA +Y ++ M
Sbjct: 369 SYNTAMHVCAKAGRWERATELLTEALGQGLQPDVVSYNTVMHACGRAGEYLQALDLFGMM 428
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G APD +++N M A R K ++L EM +P+ +Y I + G+ +
Sbjct: 429 EEVGVAPDRVSFNTAMHACNRALKWQAALQILREMEARSIAPNVKSYTIAVDACGRAGEW 488
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L+ M+ G +V +T MD R G +D +EM KG P+VV YT+
Sbjct: 489 ERALELMEEMEVRGVPANVHTYTAAMDACCRGGAVDRVLVLLEEMDGKGVEPNVVSYTIA 548
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+ + G+ ++A + + M+ +G + +Y + + AG
Sbjct: 549 MDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTALSTAGRAG 591
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 89/191 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++N ++ CG G + ++ F + P + S+N +HA +++ + ++M
Sbjct: 404 SYNTVMHACGRAGEYLQALDLFGMMEEVGVAPDRVSFNTAMHACNRALKWQAALQILREM 463
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
AP++ +Y I + A R G+ ++ L++EM G + HTY + +G
Sbjct: 464 EARSIAPNVKSYTIAVDACGRAGEWERALELMEEMEVRGVPANVHTYTAAMDACCRGGAV 523
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L LL M G +P+V+ +T MD ++R G D ++M +G D V Y
Sbjct: 524 DRVLVLLEEMDGKGVEPNVVSYTIAMDAMNRVGKWDRASAVLEQMVQRGLRLDSVSYRTA 583
Query: 192 ITSYIAAGELE 202
+++ AG+ E
Sbjct: 584 LSTAGRAGDEE 594
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%)
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV +T+ I + A +A + M +G P++ ++N+ + AG++D A +
Sbjct: 225 DVVGFTMAIKACGQARRWREALGVLREMQARGLRPDLVSFNTAMDALGKAGQYDLALELF 284
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
E+E G PN + YNT + AG + AHE++R M
Sbjct: 285 TEIEDHGFAPNLVSYNTAIHACGRAGMVDRAHELLREM 322
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 4/285 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G+ + T++++I + ++ K K+K+ F+P + Y + A +
Sbjct: 151 MLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGR 210
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +++ + +PD + YN ++ R D L EM +PD TYNI
Sbjct: 211 LKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNI 266
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A +L+ M + G P + F ++MDGL +AG + MA +
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P Y +I+ +++A+DL D ++ G +P+V TY+ + G C G+ DEA
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM +GC PN + YNTL+ L A K +A+E++ +V G
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSG 431
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 140/285 (49%), Gaps = 13/285 (4%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G + +++ ER + +F +YN ++ L + + +M D G PD
Sbjct: 244 GALEFLKEMNERKVAPDVF-------TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDT 296
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+T+N +M + GK ++ H LL M P TYN L+ L K A +L++
Sbjct: 297 VTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDE 356
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
GF P V+ ++ L DGL + G +D EM+ KGC P++V Y +I A +
Sbjct: 357 FVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASK 416
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
EKA +L + +++ G +P+V TY ++ G C G+ D+A M++ M RGC P+ + Y
Sbjct: 417 TEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 476
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
L+ L G++ EAH + + MV K Y+ LV+ + + R
Sbjct: 477 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSR 521
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 160/340 (47%), Gaps = 44/340 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E + T+N LI C V A+ +V+ F+ S F P +Y+ + L
Sbjct: 322 MAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS---GFVPDVVTYSILADGLCK 378
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++MS +G P+++TYN ++ + K ++ + LL+ + SGF PD T
Sbjct: 379 RGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVT 438
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I++ L K + AL ++ M + G PSV+ +T LM+GL R G +D + F EM
Sbjct: 439 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 498
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG--------------------------- 210
+K C D + Y ++ Y + ++AQ + DG
Sbjct: 499 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 558
Query: 211 -----MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
M +G +PN+ TYN ++ G C GK DEA ++ M S GC P+ + YN ++ L
Sbjct: 559 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 618
Query: 266 RNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A K EA +V+ M++ G Y L+++F + +R
Sbjct: 619 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 6/270 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NILI C + A +++ + P ++N+I+ L +++ +
Sbjct: 263 TYNILIDGLCKASKTDKASEMLHEMVDR---GVTPDTVTFNSIMDGLCKAGKFERAHSLL 319
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M++ P TYN ++ + +D+ L+DE SGF PD TY+IL L K
Sbjct: 320 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKR 379
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L+ M G P+++ + TL+DGL +A + + + + G +PDVV Y
Sbjct: 380 GRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTY 439
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+KA + +GM+ +G P+V TY +++ G C G+ DEA + KEM S
Sbjct: 440 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 499
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ C + L Y +LV+ + + EA +V+
Sbjct: 500 KDCTADALAYVSLVNGYCKSSRTKEAQKVV 529
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 9/297 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ +GF T+ I++ C G + A K+VE +K P +Y A++ L
Sbjct: 427 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR---GCTPSVITYTALMEGLCR 483
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M + D L Y ++ + + + +++D G G +P
Sbjct: 484 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--GIRG-TPYIDV 540
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + N+ M G P++ + +MDGL + G +D F + M
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC+PDVV Y ++I A + ++A+ + D MI G P+ TYN+++ FC +FD
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 660
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+A ++K M G +P+ + YNTL+S L +L +A+E++ M+ G + + +
Sbjct: 661 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 717
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 11/265 (4%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN ++ L + + M G PD+++YNI++ ++ K + ++
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 630
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LD+M ++G PD TYN L+ K ++ A+ +L +M + G DP + + TL+ GLS+
Sbjct: 631 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 690
Query: 163 AGNLDACKYFFDEMANKGCMPDV-VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
L EM GC+ Y +I G L++A L D M G N
Sbjct: 691 TNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 750
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN I C G+ DEA +++ EM++ + + Y T++ L A +L A ++ R M
Sbjct: 751 TYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREM 807
Query: 282 VE-KGKYIH------LVSKFKRYKR 299
V KG I L+ F + KR
Sbjct: 808 VAVKGLCITSHTFNLLIDAFTKTKR 832
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 8/269 (2%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
AR+V+++ I++ + P +YN ++ ++ + + M G PD +TYN
Sbjct: 627 ARQVLDQMIQAGI---PPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSG-FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ + +L + L+ EM R+G TYN ++ L K AL L++HM
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G + + + + +D L + G LD EM + D V YT +I A +L++A
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRA 800
Query: 205 QDLFDGMIT-KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
L M+ KG T+N +I F + DEA T++ M RGC+P+ + YN +++
Sbjct: 801 SKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVIT 860
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L K+ +A E+ M +G VS
Sbjct: 861 CLCKLDKVDKAWELFDEMAVRGIVASSVS 889
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 11/287 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G P A T+N L+ C A +++ IK+ P +YN ++ L
Sbjct: 634 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA---GVDPDNVTYNTLISGLSQ 690
Query: 58 I-RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R E +++ + + TYN ++ + G L Q L+D M G +
Sbjct: 691 TNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 750
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYNI + L K + A +LL+ M + + S +TT++ GL +A LD EM
Sbjct: 751 TYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVS---YTTVIIGLCKAEQLDRASKLAREM 807
Query: 177 -ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
A KG + ++I ++ L++A L M+ +G P+V TYN +I C K
Sbjct: 808 VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDK 867
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
D+A + EM RG + + Y L+ L G+ EA +V+ M
Sbjct: 868 VDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMA 914
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 73/197 (37%), Gaps = 31/197 (15%)
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ VL + P A+ + GF S + L G+ D F+ M +
Sbjct: 95 VVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA 154
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF--- 236
G PD Y ++I S +++KA + D +G P V Y + R FC G+
Sbjct: 155 GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA 214
Query: 237 ----------------------------DEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
D A +KEM R P+ YN L+ L A
Sbjct: 215 LEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKA 274
Query: 269 GKLAEAHEVIRHMVEKG 285
K +A E++ MV++G
Sbjct: 275 SKTDKASEMLHEMVDRG 291
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 10/188 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+NI I C G + A ++ S++ R + SY ++ L
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLL-----SEMDTLRD-EVSYTTVIIGLCK 793
Query: 58 IRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
Q + ++M + +G T+N+++ A + +LD+ LL M + G SP
Sbjct: 794 AEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVI 853
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN+++ L K DK A L + M G S + +T L+ GL G +EM
Sbjct: 854 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Query: 177 ANKGCMPD 184
A+ C D
Sbjct: 914 ASSDCEID 921
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 7/274 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+++ILI C E+G A K+ ++ I N P +YNA L+ L+ + + VY
Sbjct: 159 SYSILIDGFCKIDELGRAEKLYKQMID---LNCVPNVTTYNAFLNGLMRKGRIADAQGVY 215
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G +PD++TY+ ++ K DQ H L + M G P+ TYN LLH L K
Sbjct: 216 EEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKE 275
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
KP A L M E G DP + +TTL+ G G ++ FDEM +KG PDVV Y
Sbjct: 276 SKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAY 335
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + AG+ +A+ LF M+++ P+ ++N MI G A + D+A + + ME
Sbjct: 336 NCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395
Query: 249 -RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GC+P+ + YN+L+ L +L+EA +V + +
Sbjct: 396 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEI 429
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 136/272 (50%), Gaps = 6/272 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD--E 74
+C G V A ++E IK + P +++ +++ L + + + Q M+
Sbjct: 59 LCKAGRVDSALSLLETMIKR---GYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTIS 115
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDKPLA 133
A +YN ++ + + K+ Q + M PD +Y+IL+ K D+
Sbjct: 116 TRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGR 175
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L M ++ P+V + ++GL R G + + ++EM + GC PDV+ Y+ +I
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIH 235
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ A + ++A +LF+ MI++G PN TYN ++ G C K DEA + ++M RGC+P
Sbjct: 236 GFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDP 295
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + Y TL+ N GK+ +A EV MV KG
Sbjct: 296 DKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKG 327
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 148/291 (50%), Gaps = 11/291 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVE---RFIKSKLFNFRPFKNSYNAILHA 54
MI+ G+ T ++LI C ++ A++ ++ R I ++ + SYN++L++
Sbjct: 75 MIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF----SYNSLLNS 130
Query: 55 LLGIRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L ++ ++ M S+ PD+++Y+I++ ++ +L + +L +M P
Sbjct: 131 LCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 190
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TYN L+ L + + A + M G P V+ ++TL+ G S A D F
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ M ++GC P+ V Y ++ + ++A +LF M+ +G P+ TY +++ GFC
Sbjct: 251 EAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNV 310
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GK ++A + EM S+G +P+ + YN L+ AGK EA ++ + MV +
Sbjct: 311 GKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSR 361
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 38/169 (22%)
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM--- 211
+++ L +AG +D+ + M +G PD+ ++++I A ++++AQ+ GM
Sbjct: 54 SVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT 113
Query: 212 -----------------------------------ITKGQLPNVFTYNSMIRGFCMAGKF 236
+ +P+V +Y+ +I GFC +
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + K+M C PN YN ++ L G++A+A V M+ G
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG 222
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 1/166 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+ L+ VG + VE F + P +YN +L +
Sbjct: 288 MVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGK 347
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYN 119
++Q M PD +++NI++ + +LD + + M + G SPD TYN
Sbjct: 348 PGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYN 407
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
L+ L + A+ + + + P F L++ + AG+
Sbjct: 408 SLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 14/140 (10%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G +N L+ G+ G AR++ + + + +P S+N ++ L
Sbjct: 323 MVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSREC---KPDTVSHNIMIDGLSK 379
Query: 58 IRQYKLIEWVYQQM-SDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSP 113
++ V+++M D G +PD++TYN + +C + RL + ++ E+ R SP
Sbjct: 380 AKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS---EAMKVFKEIDRLKLSP 436
Query: 114 DFHTYNILLHVL-GKGDKPL 132
D H +N+LL + G KP
Sbjct: 437 DPHAFNVLLEAMYAAGHKPF 456
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T +S+I+ C AG+ D A ++++ M RG P+ ++ L++ L A K+ EA E ++ M
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 154/298 (51%), Gaps = 10/298 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C + AR V+ +++ +F P +YN ++ AL + +
Sbjct: 77 GCRPNAFTYNALVDGLCKQDRLDAARAVIA---EARKRDFAPDVVTYNTLMAALFQLGRV 133
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM++EGY P ++++N ++ R +L + +EM F P+ TY+++
Sbjct: 134 DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVV 193
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K D+ A LL+ M G P ++ +T L+ G S AG LD+ M ++GC
Sbjct: 194 IDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGC 253
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+PDVV YTV+I G ++ A ++F ++ PNV TY+++I G+C A + DE
Sbjct: 254 IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGK 313
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
+M+EM C PN + YNT++ L + EA+ + R M E G ++ ++ KR
Sbjct: 314 VMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG-FVPDARTYRGLKR 367
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 141/265 (53%), Gaps = 2/265 (0%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A + + + + RP +YNA++ L + V + +
Sbjct: 56 LCKLGRVDAAFDLFRKMVAAG--GCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDF 113
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APD++TYN +M A ++LG++D+ +M G+ P ++N ++ L + + AL
Sbjct: 114 APDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALE 173
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ N M + F P+++ ++ ++DGL ++ LD + D M ++GC PD+V YT ++ +
Sbjct: 174 VFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 233
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AAG L+ A L M+++G +P+V TY +I C G+ D+A + +E+ + C+PN +
Sbjct: 234 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVV 293
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y+ L+ A ++ E +V+R M
Sbjct: 294 TYSALIGGYCRASRVDEGGKVMREM 318
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 149/284 (52%), Gaps = 8/284 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIR 59
G RT +I++ C CG V A +E F S +L + +P SY +++ L +
Sbjct: 4 EGMQCNDRTTSIILQGLCRCGRVAQA---LEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 60 QYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ ++++M + G P+ TYN ++ + +LD ++ E + F+PD TY
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L + + AL M E G+ P+++ F ++ GL RA L F+EM +
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ P++V Y+V+I + +L++AQ L D M+++G P++ Y ++ GF AG+ D
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
A +++ M S+GC P+ + Y ++ L G++ +AHE+ R +V
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 284
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
F T+N L+ ++G + + F + + P S+NAI+ L R+
Sbjct: 113 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADAL 172
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V+ +M D + P+++TY++V+ + +LD+ +LLD M G PD Y L+
Sbjct: 173 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF 232
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ +AL LL M G P V+ +T ++D L + G +D F E+ C P+V
Sbjct: 233 SAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNV 292
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y+ +I Y A +++ + M + PNV TYN+MI G M + +EA M +E
Sbjct: 293 VTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFRE 349
Query: 246 MESRGCNPNFLVYNTLVSNLR 266
M G P+ Y L LR
Sbjct: 350 MSECGFVPDARTYRGLKRALR 370
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 2/189 (1%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAG 164
M G + T +I+L L + + AL + E+ P V+ +TTL++GL + G
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 165 NLDACKYFFDEM-ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
+DA F +M A GC P+ Y ++ L+ A+ + + P+V TY
Sbjct: 61 RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N+++ G+ DEA +M G P + +N +++ L A +LA+A EV M++
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180
Query: 284 KGKYIHLVS 292
+ + +LV+
Sbjct: 181 RDFHPNLVT 189
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ ++I C G V A ++ + +K P +Y+A++ G
Sbjct: 248 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC---SPNVVTYSALIG---G 301
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + M + P+++TYN ++ + + ++ + + EM GF PD T
Sbjct: 302 YCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 361
Query: 118 YNILLHVLGKGDKP 131
Y L L D P
Sbjct: 362 YRGLKRALRMIDHP 375
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 154/298 (51%), Gaps = 10/298 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C + AR V+ +++ +F P +YN ++ AL + +
Sbjct: 127 GCRPNAFTYNALVDGLCKQDRLDAARAVI---TEARKRDFAPDVVTYNTLMAALFQLGRV 183
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM++EGY P ++++N ++ R +L + +EM F P+ TY+++
Sbjct: 184 DEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVV 243
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K D+ A LL+ M G P ++ +T L+ G S AG LD+ M ++GC
Sbjct: 244 IDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGC 303
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+PDVV YTV+I G ++ A ++F ++ PNV TY+++I G+C A + DE
Sbjct: 304 IPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGK 363
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
+M+EM C PN + YNT++ L + EA+ + R M E G ++ ++ KR
Sbjct: 364 VMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG-FVPDARTYRGLKR 417
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 141/265 (53%), Gaps = 2/265 (0%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A + + + + RP +YNA++ L + V + +
Sbjct: 106 LCKLGRVDAAFDLFRKMVAAG--GCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDF 163
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APD++TYN +M A ++LG++D+ +M G+ P ++N ++ L + + AL
Sbjct: 164 APDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALE 223
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ N M + F P+++ ++ ++DGL ++ LD + D M ++GC PD+V YT ++ +
Sbjct: 224 VFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 283
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AAG L+ A L M+++G +P+V TY +I C G+ D+A + +E+ + C+PN +
Sbjct: 284 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVV 343
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y+ L+ A ++ E +V+R M
Sbjct: 344 TYSALIGGYCRASRVDEGGKVMREM 368
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 149/283 (52%), Gaps = 8/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIRQ 60
G RT +I++ C CG V A +E F S +L + +P SY +++ L + +
Sbjct: 55 GMQCNDRTTSIILQGLCRCGRVAQA---LEHFDASLELAHAQPDVVSYTTLINGLCKLGR 111
Query: 61 YKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++++M + G P+ TYN ++ + +LD ++ E + F+PD TYN
Sbjct: 112 VDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYN 171
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L + + AL M E G+ P+++ F ++ GL RA L F+EM ++
Sbjct: 172 TLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDR 231
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P++V Y+V+I + +L++AQ L D M+++G P++ Y ++ GF AG+ D A
Sbjct: 232 DFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSA 291
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+++ M S+GC P+ + Y ++ L G++ +AHE+ R +V
Sbjct: 292 LGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELV 334
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
F T+N L+ ++G + + F + + P S+NAI+ L R+
Sbjct: 163 FAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADAL 222
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V+ +M D + P+++TY++V+ + +LD+ +LLD M G PD Y L+
Sbjct: 223 EVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGF 282
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ +AL LL M G P V+ +T ++D L + G +D F E+ C P+V
Sbjct: 283 SAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNV 342
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y+ +I Y A +++ + M + PNV TYN+MI G M + +EA M +E
Sbjct: 343 VTYSALIGGYCRASRVDEGGKVMREMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFRE 399
Query: 246 MESRGCNPNFLVYNTLVSNLR 266
M G P+ Y L LR
Sbjct: 400 MSECGFVPDARTYRGLKRALR 420
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN+++ LD LL EM G + T +I+L L + + AL +
Sbjct: 26 VTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDA 85
Query: 141 MKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEM-ANKGCMPDVVCYTVMITSYIAA 198
E+ P V+ +TTL++GL + G +DA F +M A GC P+ Y ++
Sbjct: 86 SLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQ 145
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
L+ A+ + + P+V TYN+++ G+ DEA +M G P + +
Sbjct: 146 DRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSF 205
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N +++ L A +LA+A EV M+++ + +LV+
Sbjct: 206 NAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ ++I C G V A ++ + +K P +Y+A++ G
Sbjct: 298 MVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKC---SPNVVTYSALIG---G 351
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + M + P+++TYN ++ + + ++ + + EM GF PD T
Sbjct: 352 YCRASRVDEGGKVMREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 411
Query: 118 YNILLHVLGKGDKP 131
Y L L D+P
Sbjct: 412 YRGLKRALRMIDQP 425
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 148/278 (53%), Gaps = 11/278 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI C G A + E + N +P ++ A++ L Q + +
Sbjct: 569 TFNILIAGACKAGNFEQASALFEEMVAK---NLQPDVMTFGALIDGLCKAGQVEAARDIL 625
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M + G P+++TYN ++ + G++++ + L+EM SG PD TY L++ L +
Sbjct: 626 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 685
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL L++ +K G+DP + + L+DGL ++G + +EM KG PDVV Y
Sbjct: 686 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTY 745
Query: 189 TVMITSYIAAGELEKAQDLFDGM---ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+I S AG+LE+A+ L M +++ +PNV TY+ +I G C G+ DEA +++E
Sbjct: 746 NTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQE 805
Query: 246 MESRGCN--PNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
M + C+ PN + YN+ + L +AEA E++R +
Sbjct: 806 MMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSL 843
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 146/291 (50%), Gaps = 10/291 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T T+N +I C E+G ++ E ++ P +YN ++ +L
Sbjct: 207 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER---GHHPDVVTYNTLIDSLCK 263
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS--PDF 115
+ ++ MS P+++TY++++ ++G++D+ L+ EM R P+
Sbjct: 264 AGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNI 323
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKE--VGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN L L K A L+ +++ + P + F+TL+DGL + G +D F
Sbjct: 324 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVF 383
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M G +P+V+ Y ++ A ++E+A + + M+ KG P+V TY+ ++ FC A
Sbjct: 384 DDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 443
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ DEA ++ M SRGC PN + +N+++ L + + EA ++ M K
Sbjct: 444 SRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALK 494
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 135/267 (50%), Gaps = 6/267 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A +V R ++ +L P K ++N ++ ++ ++++M + PD+
Sbjct: 546 GDVSRALQVYNRMLELELV---PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+T+ ++ + G+++ +LD MG G P+ TYN L+H L K + A L
Sbjct: 603 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P + + +L+ L RA D E+ + G PD V Y +++ +G+
Sbjct: 663 MVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQ 722
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME---SRGCNPNFLV 257
E+A + + M+ KG P+V TYN++I C AG +EA + +M SR C PN +
Sbjct: 723 TEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVT 782
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEK 284
Y+ L++ L G++ EA E+I+ M+ K
Sbjct: 783 YSVLINGLCKVGRIDEARELIQEMMRK 809
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 141/290 (48%), Gaps = 13/290 (4%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ T+NIL+ G+ A V+E + P +YN ++ +L
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGK---GHHPDVVTYNTLIDSLCKAGDL 758
Query: 62 KLIEWVYQQMSDEGY---APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS--PDFH 116
+ ++ MS P+++TY++++ ++G++D+ L+ EM R P+
Sbjct: 759 EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII 818
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKE--VGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN L L K A L+ +++ + P + F+TL+DGL + G D FD
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M G +P+VV Y V++ ++E+A + + M+ KG P+V TY+ ++ FC A
Sbjct: 879 DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 938
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
DEA ++ M SRGC PN + +N+++ L + + EA ++ M K
Sbjct: 939 HVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLK 988
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 144/333 (43%), Gaps = 48/333 (14%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T+N L+ C G + A + +E + S P +Y ++++AL +
Sbjct: 632 GVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV---PDSITYGSLVYALCRASRT 688
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ G+ PD +TYNI++ ++ G+ +Q +L+EM G PD TYN L
Sbjct: 689 DDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTL 748
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFD---PSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L K A L M P+V+ ++ L++GL + G +D + EM
Sbjct: 749 IDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMR 808
Query: 179 KGC---------------------------------------MPDVVCYTVMITSYIAAG 199
K C PD V ++ +I G
Sbjct: 809 KSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 868
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+ ++A ++FD MI G +PNV TYN ++ G C K + A M++ M +G P+ + Y+
Sbjct: 869 QTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS 928
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
LV A + EA E++ M +G ++V+
Sbjct: 929 VLVDAFCKASHVDEALELLHGMASRGCTPNVVT 961
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 145/289 (50%), Gaps = 13/289 (4%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+NI++ C GE A ++ + P +YN I++ L + +++
Sbjct: 183 YNIVLQSLCRAGETARALEIFRGEMARD--GVAPTIVTYNTIINGLCKSNELGAGMELFE 240
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ + G+ PD++TYN ++ + + G L++ RL +M P+ TY++L++ L K
Sbjct: 241 ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVG 300
Query: 130 KPLAALNLLNHMKEVGFD--PSVLHFTTLMDGLSRAG-NLDACKYFFDEMANKGCM---P 183
+ A L+ M D P+++ + + +DGL + +AC+ G + P
Sbjct: 301 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM--RSLRDGSLRVSP 358
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D V ++ +I G++++A +FD MI G +PNV TYN+++ G C A K + A M+
Sbjct: 359 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 418
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M +G P+ + Y+ LV A ++ EA E++ M +G ++V+
Sbjct: 419 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 467
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 121/250 (48%), Gaps = 4/250 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P K +Y ++ L + E + M D PD +N + +LG + + ++
Sbjct: 499 PDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQV 554
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M PD T+NIL+ K A L M P V+ F L+DGL +
Sbjct: 555 YNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCK 614
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG ++A + D M N G P+VV Y ++ +G +E+A + M++ G +P+ T
Sbjct: 615 AGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSIT 674
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S++ C A + D+A ++ E++S G +P+ + YN LV L +G+ +A V+ MV
Sbjct: 675 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMV 734
Query: 283 EKGKYIHLVS 292
KG + +V+
Sbjct: 735 GKGHHPDVVT 744
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 32/293 (10%)
Query: 32 RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKY 91
R ++ P +++ ++ L Q V+ M GY P+++TYN ++
Sbjct: 347 RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLC 406
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
+ K+++ H +++ M G +PD TY++L+ K + AL LL+ M G P+V+
Sbjct: 407 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVV 466
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
F +++DGL ++ FD+MA K G +PD + Y +I G +A+ L D
Sbjct: 467 TFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDA 526
Query: 211 MITKGQ-------------------------------LPNVFTYNSMIRGFCMAGKFDEA 239
M +P+ T+N +I G C AG F++A
Sbjct: 527 MPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQA 586
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM ++ P+ + + L+ L AG++ A +++ M G ++V+
Sbjct: 587 SALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 639
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ LI C CG+ A V + I + P +YN +++ L + + +
Sbjct: 856 TFSTLIDGLCKCGQTDEACNVFDDMIAG---GYVPNVVTYNVLMNGLCKTDKMERAHAMI 912
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M D+G PD++TY++++ A + +D+ LL M G +P+ T+N ++ L K
Sbjct: 913 ESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 972
Query: 129 DKPLAALNLLNHMK-EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D+ A + + M + G P + + TL+DGL R G + D M + PD
Sbjct: 973 DQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYA 1028
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ I G++ +A M+ +P+ T+N +I G C AG F++A + +EM
Sbjct: 1029 FNCCINGLSKLGDVSRA---LHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 1085
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++ P+ + + L+ L AG++ +++
Sbjct: 1086 AKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Query: 150 VLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
V + ++ L RAG A + F EMA G P +V Y +I + EL +LF
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELF 239
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ ++ +G P+V TYN++I C AG +EA + +M SR C PN + Y+ L++ L
Sbjct: 240 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKV 299
Query: 269 GKLAEAHEVIRHMVEK 284
G++ EA E+I+ M K
Sbjct: 300 GRIDEARELIQEMTRK 315
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI-TSYIAAGELEK 203
GF ++ F ++ L ++G+ F C P+ Y+ ++ +Y A G++E+
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVER 165
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK-EMESRGCNPNFLVYNTLV 262
F + +V YN +++ C AG+ A + + EM G P + YNT++
Sbjct: 166 TLGFF--RRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTII 223
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ L + +L E+ +VE+G + +V+
Sbjct: 224 NGLCKSNELGAGMELFEELVERGHHPDVVT 253
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 158/331 (47%), Gaps = 42/331 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G+ T+N L+ C GE+ A K+ + +K F P +YNA+++
Sbjct: 36 MIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKR---GFVPDVVTYNALINGFCK 92
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG---------- 107
+ + + Q+M E PD++TYN ++ + G++D+ L+ + G
Sbjct: 93 ADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYST 152
Query: 108 -----------------------RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
+ G+ P+ TYNIL+ L K D+ A L + + +
Sbjct: 153 LISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKH 212
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G +P + +T +DGL +AG ++ +M KGC+PDVV + +I +++A
Sbjct: 213 GLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEA 272
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ L GM KG PN ++N++I G C AGK+ +A T KEM RG P + YN LV
Sbjct: 273 EVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDG 332
Query: 265 L---RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L R G++ EA + M+EKG+ +V+
Sbjct: 333 LCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 4/289 (1%)
Query: 1 MIENGFPTTARTFNILICT-CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+++ GF T++ LI C E+ + ++ F + P +YN ++ LL
Sbjct: 138 IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKED 197
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ ++ + G PD +TY + + + G+++ +L +M G PD ++N
Sbjct: 198 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 257
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ L K + A LL+ M+ G P+ + F TL+ G RAG F EM +
Sbjct: 258 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 317
Query: 180 GCMPDVVCYTVMITSYIAA---GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P VV Y +++ A G +++A LFD MI KG++P+V TY+++I G AGK
Sbjct: 318 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 377
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D+A ++ ME++GC PN YN+L+S L K+ EA E+ MVEKG
Sbjct: 378 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKG 426
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 138/279 (49%), Gaps = 35/279 (12%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P + +YNA+L L + + +Y++M GY+PD++TYN ++ ++G+LD+
Sbjct: 6 FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL 65
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM------------------- 141
++ D + GF PD TYN L++ K DK A +L M
Sbjct: 66 KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125
Query: 142 -------------KEVGFDPSVLHFTTLMDGLSRA--GNLDACKYFFDEMANKGCMPDVV 186
+ GF P+V+ ++TL+ GL R G +A K F + +G P+V
Sbjct: 126 CKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALK-LFGSVLKQGYEPEVP 184
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I + + +A +LF G++ G P+ TY I G C AG+ ++A M+K+M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +GC P+ + +N +++ L ++ EA ++ M KG
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 130/266 (48%), Gaps = 3/266 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++ G+ T+NILI + + E F P +Y + L +
Sbjct: 174 VLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M ++G PD++++N V+ + ++D+ LL M G SP+ ++N
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA---GNLDACKYFFDEMA 177
L+ + K A+ M + G P+V+ + L+DGL +A G + FD M
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG +PDVV Y+ +I AG+L+ A+ L M KG +PNV+TYNS+I G C K D
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVD 413
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVS 263
EA + M +GC P+ + Y T++S
Sbjct: 414 EALELFVAMVEKGCVPDTITYGTIIS 439
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M + GF P+ TYN LL L G + A L M + G+ P V+ + TL+ G + G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD FD +G +PDVV Y +I + A +L++AQ + M+++ +P+V TYNS
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEK 284
++ G C G+ DEA ++ + +G +PN + Y+TL+S L R ++EA ++ ++++
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 285 G 285
G
Sbjct: 178 G 178
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G+ P+ +TYN ++ G++ L + M ++G+SPD TYN LLH K +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AL + + + GF P V+ + L++G +A LD + M ++ +PDVV Y
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK-FDEACTMMKEMESR 249
++ G +++A+ L ++ KG PNV TY+++I G C + EA + + +
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P YN L+ L ++ EA E+ +V+ G
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG 213
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQF 99
P S+N ++ ++K +++M G P ++TYNI+ +C + G++ +
Sbjct: 286 PNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEA 345
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L D M G PD TY+ L+ LGK K A LL M+ G P+V + +L+ G
Sbjct: 346 ITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISG 405
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L +D F M KGC+PD + Y +I++
Sbjct: 406 LCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E T+ LI C + ARK++E+ +S L P +YNA+L+ L
Sbjct: 153 MLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGL---TPDTVAYNALLNGLCK 209
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + + ++M + G PD +YN V+ GK ++ ++L++M PD T
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K K A LL M P+V+ +TTL+ G SRA L ++M
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMF 329
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD+V Y ++ AG+LE+A +L + M+ K P+V TY+ ++ G C GK D
Sbjct: 330 KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVD 389
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+A +++ M RGC PN + +NT++ AGK+ E H+V+ M E
Sbjct: 390 DARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 152/294 (51%), Gaps = 6/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G +N L+ C ++ K++E +++ P SYN ++ L
Sbjct: 188 MKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEA---GREPDTFSYNTVVACLCE 244
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+Y+ + ++M ++ PD++TYN +M ++ K+D+ RLL++M +P T
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVIT 304
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + D+ A ++ M + G P ++ + L+DGL +AG L+ + M
Sbjct: 305 YTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMV 364
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K C PDVV Y++++ G+++ A+ L + M+ +G PN+ T+N+MI GFC AGK D
Sbjct: 365 EKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVD 424
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
E +++ M+ C P+ + Y+TL+ A ++ +A ++ +K Y ++
Sbjct: 425 EGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSML 478
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 143/279 (51%), Gaps = 6/279 (2%)
Query: 9 TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
TA T+ ILI C C + A ++++ I+ + P YN ++ L + +
Sbjct: 91 TAFTYCILIHGLCQCQRIDEAYQLLDEMIQK---DCHPDAAVYNCLIAGLCKMGKIDAAR 147
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V + M + PD++TY ++ + LD+ +L+++M SG +PD YN LL+ L
Sbjct: 148 NVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGL 207
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ++ LL M E G +P + T++ L +G + ++M K C PDV
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDV 267
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++ + ++++A+ L + M+ + P V TY ++I GF A + +A +M++
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMED 327
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M G +P+ + YN L+ L AGKL EAHE++ MVEK
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEK 366
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ A +N LI C G++ AR V++ ++ P +Y +++
Sbjct: 118 MIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCV---PDVITYTSLIVGCCQ 174
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++M + G PD + YN ++ + +L++ +LL+EM +G PD +
Sbjct: 175 TNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFS 234
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L + K A +L M E P V+ + +LMDG + +D + ++M
Sbjct: 235 YNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMV 294
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C P V+ YT +I + A L A + + M G P++ TYN ++ G C AGK +
Sbjct: 295 GRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLE 354
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA +++ M + C P+ + Y+ LV+ L GK+ +A ++ M+E+G +LV+
Sbjct: 355 EAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVT 409
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 39/297 (13%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG------- 94
+P ++Y A++ K++ + +M ++PD++T+N ++ A ++G
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 95 --------------------------KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++D+ ++LLDEM + PD YN L+ L K
Sbjct: 81 HFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKM 140
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K AA N+L M E P V+ +T+L+ G + LD + ++M G PD V Y
Sbjct: 141 GKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAY 200
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ +LE+ L + M+ G+ P+ F+YN+++ C +GK++EA ++++M
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ C P+ + YN+L+ K+ EA ++ MV + Y L+ F R R
Sbjct: 261 KKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADR 317
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 35/317 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N L+ C G++ A +++E ++ + P +Y+ +++ L
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEK---DCAPDVVTYSILVNGLCK 384
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-------- 109
+ + + + M + G P+++T+N ++ + GK+D+ H++L+ M
Sbjct: 385 LGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVT 444
Query: 110 ---------------------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
G SPD +Y+ +L L K A +++ M + G P
Sbjct: 445 YSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPP 504
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ H+ ++ GL D M+ +GC P++ Y+++I +E A ++
Sbjct: 505 TSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVL 564
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
D M+ KG +P+V TY S+I GFC K D A K M GC P+ L YN L+S +
Sbjct: 565 DVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQS 624
Query: 269 GKLAEAHEVIRHMVEKG 285
G + +A EV++ M+EKG
Sbjct: 625 GNVEKAIEVMQLMLEKG 641
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 128/268 (47%), Gaps = 12/268 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G TFN +I C G+V KV+E K + P +Y+ ++
Sbjct: 398 MLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELM---KEVSCTPDVVTYSTLIDG--- 451
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y + + G +PD +Y+ ++ GK+++ ++D M + G P
Sbjct: 452 ---YCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSH 508
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ L ++ AL +L M E G +P++ ++ L++GL + ++ D M
Sbjct: 509 YALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVML 568
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC+PDV YT +I + +++ A F M G P+ YN +I GFC +G +
Sbjct: 569 EKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVE 628
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
+A +M+ M +GCNP+ Y +L+ +L
Sbjct: 629 KAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 33/146 (22%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
FF E + P Y +IT + AG + ++ + M+ + P+V T+N++++ +C
Sbjct: 11 FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70
Query: 232 MAG---------------------------------KFDEACTMMKEMESRGCNPNFLVY 258
G + DEA ++ EM + C+P+ VY
Sbjct: 71 QIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEK 284
N L++ L GK+ A V++ M+E+
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLER 156
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 71/161 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T+ + ++I +V + ++ P +Y+ +++ L ++
Sbjct: 497 MTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKR 556
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V M ++G PD+ TY ++ ++ K+D ++ M SG PD YNI
Sbjct: 557 VEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNI 616
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ + A+ ++ M E G +P + +LM L+
Sbjct: 617 LISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLT 657
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 147/284 (51%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G P T F +I GEVG+ + ++ F + F + P +N +L L+ +
Sbjct: 159 MRKDGCPYTPGLFVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKC 218
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +++++ + G +P+ TYNI++ A KL + L ++M + G PD TY+I
Sbjct: 219 LETALSLFKKLHEFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSI 278
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + AL +L+ M G+ P L + TL++ L R NL +M G
Sbjct: 279 LMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMG 338
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDV+ Y +IT + G A + M G LPN +Y +++ G C GKFDEA
Sbjct: 339 CNPDVINYNTVITGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAK 398
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++EM S G P+ +Y+ L++ L N GK+ EA EV+ M ++
Sbjct: 399 DFVEEMISNGFIPHISIYHLLITGLCNEGKVGEACEVLVMMTKQ 442
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 143/284 (50%), Gaps = 3/284 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G+ A+ FN+L+ E + F K F P +YN ++ A +
Sbjct: 194 MLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNILIRAHCHSDK 253
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++ +M +G PD+ TY+I+M R ++ +LDEM G+ PD TYN
Sbjct: 254 LSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKGYVPDALTYNT 313
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEMANK 179
LL+ L + A LL+ MK +G +P V+++ T++ G R G LDAC+ D M
Sbjct: 314 LLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDACQILRD-MPEN 372
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC+P+ + Y ++ G+ ++A+D + MI+ G +P++ Y+ +I G C GK EA
Sbjct: 373 GCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYHLLITGLCNEGKVGEA 432
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
C ++ M + P+ ++ L+ + + EA E++ + E
Sbjct: 433 CEVLVMMTKQTLAPHESTWSVLLMRICEDSQ-TEARELVDKLSE 475
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 136/291 (46%), Gaps = 6/291 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLAR--KVVERFIKSKLFNFRPFKNSYNAILHALLG-IR 59
+ GF + T++ LIC ++G AR K +E I+ + P+ + + G +
Sbjct: 126 QPGFKHSYSTYHTLIC---KLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVG 182
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ QM + GY P +N+++ L+ L ++ G SP+ TYN
Sbjct: 183 MPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYN 242
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
IL+ DK A L N M + G P V ++ LM GL R + DEM NK
Sbjct: 243 ILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNK 302
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +PD + Y ++ S L +A L M G P+V YN++I GFC G+ +A
Sbjct: 303 GYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREGRALDA 362
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
C ++++M GC PN L Y TLV+ L N GK EA + + M+ G H+
Sbjct: 363 CQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHI 413
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 66/179 (36%), Gaps = 35/179 (19%)
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC------------------MP 183
++ GF S + TL+ L RA + +M GC MP
Sbjct: 125 RQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDIIEIYGEVGMP 184
Query: 184 DVVC-----------------YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + V++ I LE A LF + G PN TYN +
Sbjct: 185 NEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLHEFGISPNTRTYNIL 244
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
IR C + K A + +M +GC P+ Y+ L+ L ++ A V+ M+ KG
Sbjct: 245 IRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLDEMLNKG 303
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 151/322 (46%), Gaps = 41/322 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N+LI C +V A +++ +S L P +Y+ ++H
Sbjct: 33 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLA---PNVVTYSTVIHGFCR 89
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++QM + G P+++TYN ++ R G +D+ + LLDEM G PD +
Sbjct: 90 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 149
Query: 118 YNILLHVLGK----------------GDKPL-------------------AALNLLNHMK 142
Y+ L+ L K GD P A L M+
Sbjct: 150 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMR 209
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E +P V+ FT LMDGL + L + + M ++ C P+V+ Y+ +I G++
Sbjct: 210 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 269
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
AQ++F MI +G PNV TYNS+I GFCM D A +M+EM + GC P+ + YNTL+
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 329
Query: 263 SNLRNAGKLAEAHEVIRHMVEK 284
L G+ EA+ + M K
Sbjct: 330 DGLCKTGRAPEANRLFGDMKAK 351
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 136/260 (52%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
F K K P + +YN +++ + + + ++M + G AP+++TY+ V+ R
Sbjct: 30 FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCR 89
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
K+D ++L +M +G P+ TYN LL L + A LL+ M+E G P
Sbjct: 90 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 149
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ TLM GL + G +D F++ +N C PDVV Y+ +I G L++A LF+ M
Sbjct: 150 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMR 209
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
P+V T+ +++ G C + EA +++ ME R C PN + Y++L+ L G++
Sbjct: 210 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 269
Query: 273 EAHEVIRHMVEKGKYIHLVS 292
+A EV + M+ +G ++V+
Sbjct: 270 DAQEVFKRMIVRGIEPNVVT 289
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M EN TF L +C + A++V+E N P +Y++++ L
Sbjct: 208 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR---NCTPNVITYSSLIDGLCK 264
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + V+++M G P+++TYN ++ +D L++EM +G PD T
Sbjct: 265 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 324
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K + A L MK +P V+ ++ L+ G + +D + FD+M
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ +PDVV ++ ++ Y AG ++ A+ L + M+ P+V+TY S++ GFC G+
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 444
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++K M RGC PN + Y L+ AGK A++++ MV G ++++
Sbjct: 445 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVIT 499
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 146/292 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ENG T+N L+ GL + E + + +P K SY+ ++ L +
Sbjct: 103 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 162
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V++ S+ PD++ Y+ ++ + G+LD+ +L ++M + PD T+
Sbjct: 163 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTA 222
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L KGD+ A +L M++ P+V+ +++L+DGL + G + + F M +G
Sbjct: 223 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 282
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y +I + ++ A L + M G LP++ TYN++I G C G+ EA
Sbjct: 283 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 342
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +M+++ CNP+ + Y+ L+ ++ A + M+++ +V+
Sbjct: 343 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 394
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V A++V +R I + P +YN+++H + ++M+ G
Sbjct: 262 LCKTGQVRDAQEVFKRMI---VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 318
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PDI+TYN ++ + G+ + +RL +M +PD TY+ L+ K ++ A
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 378
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M + P V+ F+TL++G AG +D + +EM C PDV YT ++ +
Sbjct: 379 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 438
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G + +A+ + M +G PNV TY ++I FC AGK A +++EM G PN +
Sbjct: 439 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVI 498
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y +L+ G L EA +++ +
Sbjct: 499 TYRSLIGGFCGTGDLEEARKMLERL 523
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 111/205 (54%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
+++T+ I++ + +L + +M + G P+ TYN+L++ K K A LL
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
MKE G P+V+ ++T++ G R +D F +M GCMP++V Y +++
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G +++A +L D M +G P+ F+Y++++ G C GK D A + ++ + C P+ + Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVE 283
+TL++ L G+L EA ++ M E
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRE 210
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 5/274 (1%)
Query: 12 TFNILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
T+N LI + G A + F +K+K N P +Y+ ++ + + + ++
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCN--PDVITYSCLIGGFCKLERIDMARTLFD 381
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M + PD++T++ ++ G +D RLL+EM S SPD +TY L+ K
Sbjct: 382 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ + A +L M + G P+V+ +T L+D RAG +EM G P+V+ Y
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I + G+LE+A+ + + + ++F Y M+ G C G+ A +++ ++
Sbjct: 502 SLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 561
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
G P +Y L+ L +L +A EV+ M
Sbjct: 562 SGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 595
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 78/139 (56%)
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
+ +V+ +T ++DGL +A L +F +M KG +P+ Y V+I + ++ +A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
L M G PNV TY+++I GFC K D A + ++M GC PN + YNTL+S L
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLC 123
Query: 267 NAGKLAEAHEVIRHMVEKG 285
G + EA+E++ M E+G
Sbjct: 124 RNGLMDEAYELLDEMRERG 142
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ L+ C G V A +++E + S + P +Y +++ + + V
Sbjct: 394 TFSTLVEGYCNAGLVDDAERLLEEMVAS---DCSPDVYTYTSLVDGFCKVGRMVEARRVL 450
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VLGK 127
++M+ G P+++TY ++ A R GK ++LL+EM +G P+ TY L+ G
Sbjct: 451 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGT 510
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
GD A L ++ + + +MDGL R G + A + + G P
Sbjct: 511 GDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 570
Query: 188 YTVMITSYIAAGELEKAQDLFDGM-ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I EL KA ++ + M +++ PN Y ++I+ G+ +EA + E+
Sbjct: 571 YVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 630
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C +V+ +T+MI A L +A F M KG +PN +TYN +I GFC K A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++KEM+ G PN + Y+T++ K+ A+++ R MVE G +LV+
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 114
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 151/322 (46%), Gaps = 41/322 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N+LI C +V A +++ +S L P +Y+ ++H
Sbjct: 152 MKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGL---APNVVTYSTVIHGFCR 208
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++QM + G P+++TYN ++ R G +D+ + LLDEM G PD +
Sbjct: 209 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 268
Query: 118 YNILLHVLGK----------------GDKPL-------------------AALNLLNHMK 142
Y+ L+ L K GD P A L M+
Sbjct: 269 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E +P V+ FT LMDGL + L + + M ++ C P+V+ Y+ +I G++
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
AQ++F MI +G PNV TYNS+I GFCM D A +M+EM + GC P+ + YNTL+
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448
Query: 263 SNLRNAGKLAEAHEVIRHMVEK 284
L G+ EA+ + M K
Sbjct: 449 DGLCKTGRAPEANRLFGDMKAK 470
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 137/260 (52%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
F K K P + +YN +++ + + + ++M + G AP+++TY+ V+ R
Sbjct: 149 FAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCR 208
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
K+D ++L +M +G P+ TYN LL L + A LL+ M+E G P
Sbjct: 209 QTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFS 268
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ TLM GL + G +D F++ +N C PDVV Y+ +I AG L++A LF+ M
Sbjct: 269 YDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMR 328
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
P+V T+ +++ G C + EA +++ ME R C PN + Y++L+ L G++
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388
Query: 273 EAHEVIRHMVEKGKYIHLVS 292
+A EV + M+ +G ++V+
Sbjct: 389 DAQEVFKRMIVRGIEPNVVT 408
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M EN TF L +C + A++V+E N P +Y++++ L
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR---NCTPNVITYSSLIDGLCK 383
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + V+++M G P+++TYN ++ +D L++EM +G PD T
Sbjct: 384 TGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIIT 443
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K + A L MK +P V+ ++ L+ G + +D + FD+M
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 503
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ +PDVV ++ ++ Y AG ++ A+ L + M+ P+V+TY S++ GFC G+
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 563
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++K M RGC PN + Y L+ AGK A+ ++ MV G ++++
Sbjct: 564 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVIT 618
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 124/239 (51%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN + ALL R+ + + G P++ TY +V+ + G LD+ LL+EM
Sbjct: 26 TYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEM 85
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
SG PD YN ++H L K AL+ M+ + +V+ +T ++DGL +A L
Sbjct: 86 RESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKANRL 142
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+F +M KG +P+ Y V+I + ++ +A L M G PNV TY+++
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GFC K D A + ++M GC PN + YNTL+S L G + EA+E++ M E+G
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERG 261
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 146/292 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ENG T+N L+ GL + E + + +P K SY+ ++ L +
Sbjct: 222 MVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGK 281
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V++ S+ PD++ Y+ ++ + G+LD+ +L ++M + PD T+
Sbjct: 282 IDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTA 341
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L KGD+ A +L M++ P+V+ +++L+DGL + G + + F M +G
Sbjct: 342 LMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRG 401
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y +I + ++ A L + M G LP++ TYN++I G C G+ EA
Sbjct: 402 IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEAN 461
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +M+++ CNP+ + Y+ L+ ++ A + M+++ +V+
Sbjct: 462 RLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVT 513
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V A++V +R I + P +YN+++H + ++M+ G
Sbjct: 381 LCKTGQVRDAQEVFKRMI---VRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PDI+TYN ++ + G+ + +RL +M +PD TY+ L+ K ++ A
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M + P V+ F+TL++G AG +D + +EM C PDV YT ++ +
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G + +A+ + M +G PNV TY ++I FC AGK A +++EM G PN +
Sbjct: 558 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVI 617
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y +L+ G L EA +++ +
Sbjct: 618 TYRSLIGGFCGTGDLEEARKILERL 642
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 13/290 (4%)
Query: 1 MIENGFPT----TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
+++NG+P T+ ++I C G++ A +++E +S P YN ++H
Sbjct: 46 ILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPV---PDAAIYNFVIH 102
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL R ++ M E +++T+ I++ + +L + +M + G P
Sbjct: 103 ALCKARNTAKALDYFRSMECE---KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVP 159
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TYN+L++ K K A LL MKE G P+V+ ++T++ G R +D F
Sbjct: 160 NEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 219
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M GCMP++V Y +++ G +++A +L D M +G P+ F+Y++++ G C
Sbjct: 220 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 279
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
GK D A + ++ + C P+ + Y+TL++ L AG+L EA ++ M E
Sbjct: 280 GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRE 329
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 129/274 (47%), Gaps = 5/274 (1%)
Query: 12 TFNILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
T+N LI + G A + F +K+K N P +Y+ ++ + + + ++
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCN--PDVITYSCLIGGFCKLERIDMARTLFD 500
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M + PD++T++ ++ G +D RLL+EM S SPD +TY L+ K
Sbjct: 501 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ + A +L M + G P+V+ +T L+D RAG +EM G P+V+ Y
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I + G+LE+A+ + + + ++F Y M+ G C G+ A +++ ++
Sbjct: 621 SLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQ 680
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
G P +Y L+ L +L +A EV+ M
Sbjct: 681 SGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMT 714
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 111/231 (48%), Gaps = 6/231 (2%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ W +Q +G+ ++ TYN + A R ++D+ +L G +P+ TY ++
Sbjct: 9 RFFHWASKQ---QGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVV 65
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A LL M+E G P + ++ L +A N +F M C
Sbjct: 66 IQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---C 122
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+V+ +T+MI A L +A F M KG +PN +TYN +I GFC K A
Sbjct: 123 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 182
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++KEM+ G PN + Y+T++ K+ A+++ R MVE G +LV+
Sbjct: 183 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT 233
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 8/240 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ L+ C G V A +++E + S + P +Y +++ + + V
Sbjct: 513 TFSTLVEGYCNAGLVDDAERLLEEMVAS---DCSPDVYTYTSLVDGFCKVGRMVEARRVL 569
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VLGK 127
++M+ G P+++TY ++ A R GK +RLL+EM +G P+ TY L+ G
Sbjct: 570 KRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGT 629
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
GD A L ++ + + +MDGL R G + A + + G P
Sbjct: 630 GDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDI 689
Query: 188 YTVMITSYIAAGELEKAQDLFDGM-ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I EL KA ++ + M +++ PN Y ++I+ G+ +EA + E+
Sbjct: 690 YVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADEL 749
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%)
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A ++F +G +V Y + + + A +++ + G PNVFTY +I
Sbjct: 7 ALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVI 66
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+G C +G D+AC +++EM G P+ +YN ++ L A A+A + R M
Sbjct: 67 QGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM 120
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/288 (32%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G ++N LI C G +A V F K + +P +YN I+ +L
Sbjct: 189 MVRSGHEPDVISYNTLINGLCNSGNTNMA---VHVFKKMEQNGCKPNVVTYNTIIDSLCK 245
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R +M G PD +TYN ++ LG+L++ RL M ++G PD T
Sbjct: 246 DRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVT 305
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI++ L K A + L+ M + G P V+ +TT++ GL G L+ F +M
Sbjct: 306 YNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKME 365
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PDVV Y +I S + A + M+ +G PN TY++++ GFC G+ D
Sbjct: 366 QKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLD 425
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + KEM R PN L ++ LV L G ++EA V M EKG
Sbjct: 426 EATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 148/287 (51%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P A T+N ++ C G++ A ++ +R ++ +P +YN I+ +L
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQN---GCKPDVVTYNIIIDSLYK 315
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R +M D+G PD++TY ++ LG+L++ RL +M + G PD
Sbjct: 316 DRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVA 375
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K A+ L+ M + G P+ + ++T++ G G LD F EM
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMV 435
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ MP+ + +++++ G + +A+ +F+ M KG PN++TYN+++ G+C+ K +
Sbjct: 436 GRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMN 495
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA + + M +GC P+ YN L++ N+ ++ +A ++ M K
Sbjct: 496 EARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVK 542
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T + NILI C V A V + K +P ++ +++ + +
Sbjct: 123 GVTHTVYSLNILINCLCRLNHVDFAVSVWGKMFK---LGIQPDVITFTTLINGVCNEGKI 179
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K+ +Y +M G+ PD+++YN ++ G + + +M ++G P+ TYN +
Sbjct: 180 KVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTI 239
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A++ L+ M G P + + +++ GL G L+ F M GC
Sbjct: 240 IDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGC 299
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDVV Y ++I S + A D M+ +G P+V TY +++ G C G+ +EA
Sbjct: 300 KPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIR 359
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K+ME +GC P+ + YNT++ +L + +A E + MV++G
Sbjct: 360 LFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRG 403
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 125/253 (49%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
F + N RP + L ++ ++QY + ++ QM G + + NI++ R
Sbjct: 81 FYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCR 140
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
L +D + +M + G PD T+ L++ + K A+ L N M G +P V+
Sbjct: 141 LNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVIS 200
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ TL++GL +GN + + F +M GC P+VV Y +I S + A D M+
Sbjct: 201 YNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G P+ TYNS++ G C G+ +EA + K ME GC P+ + YN ++ +L +
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320
Query: 273 EAHEVIRHMVEKG 285
+A + + MV++G
Sbjct: 321 DAADFLSEMVDQG 333
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G P T+ ++ +G + + F K + +P +YN I+ +L R
Sbjct: 329 MVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRL 388
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+M D G P+ +TY+ ++ LG+LD+ +L EM P+ T++I
Sbjct: 389 VNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSI 448
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A + M E G +P++ + LM+G ++ + F+ M KG
Sbjct: 449 LVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKG 508
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+ Y ++I Y + ++KA+ L M K PN TYN++++G C G+ +A
Sbjct: 509 CAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQ 568
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ K+M S G P + Y+ L++ L G L EA ++ + M EK
Sbjct: 569 ELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 135/282 (47%), Gaps = 6/282 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P A T++ ++ C G++ A ++ + + N P +++ ++ L
Sbjct: 399 MVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR---NVMPNTLTFSILVDGLCQ 455
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
WV++ M+++G P+I TYN +M K+++ ++ + M G +PD H+
Sbjct: 456 EGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHS 515
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL++ + A LL M P+ + + T+M GL G L + F +M
Sbjct: 516 YNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMC 575
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +P ++ Y++++ G L++A LF M K P++ Y +I G + GK +
Sbjct: 576 SSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLE 635
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
A + ++ + G P YN ++ L G EA+E+ R
Sbjct: 636 VAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL M + PS++ F + +++ Y ++M G V ++I
Sbjct: 77 ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILIN 136
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
++ A ++ M G P+V T+ ++I G C GK A + EM G P
Sbjct: 137 CLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEP 196
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YNTL++ L N+G A V + M + G
Sbjct: 197 DVISYNTLINGLCNSGNTNMAVHVFKKMEQNG 228
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DA F+ MA P +V + + S + L + M G V++ N +
Sbjct: 76 DALASFY-RMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNIL 134
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C D A ++ +M G P+ + + TL++ + N GK+ A E+ MV G
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194
Query: 287 YIHLVS 292
++S
Sbjct: 195 EPDVIS 200
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 30/318 (9%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G + F +I + G + + ++ F + + F +P YN IL ALL ++++I
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMI 165
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y M +G P++ TYNI++ A + ++D H+LL EM G PD +Y L+
Sbjct: 166 NPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISS 225
Query: 125 LGKGDK---------------PL---------------AALNLLNHMKEVGFDPSVLHFT 154
L K K P+ A LL+ M G DP+V+ +T
Sbjct: 226 LCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
T+++ LS AGN++ +M +GC P++ +T +I + G +A D +D MI +
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +PNV YN+++ G C +A ++ +ME GC PN Y+ L+ AG L A
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Query: 275 HEVIRHMVEKGKYIHLVS 292
EV M+ G + ++V+
Sbjct: 406 SEVWNWMITHGCHPNVVA 423
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SY I++AL +L V +M G +P++ T+ ++ + G + D M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G P+ YN L+H L A+++ N M+ G P+V ++ L+DG ++AG+L
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D ++ M GC P+VV YT M+ +A L + M + PN T+N+
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I+G C +G+ D A + +M + GC PN YN L+ +L + EA +++ M +G
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522
Query: 287 YIHLVS 292
++LV+
Sbjct: 523 ELNLVT 528
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YNA++H L R V+ QM G P++ TY+ ++ + G LD +
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M G P+ Y ++ VL + A L+ +M+ P+ + F T + GL
Sbjct: 409 WNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCG 468
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+G +D FD+M N GC P+ Y ++ S + +A L M +G N+ T
Sbjct: 469 SGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVT 528
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+C AG EA ++ +M RG P+ + N ++ GK+ A +++ +
Sbjct: 529 YNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL- 587
Query: 283 EKGKY 287
GK+
Sbjct: 588 SAGKW 592
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 6/265 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG RT++ LI G++ A +V I P +Y ++ L
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMIT---HGCHPNVVAYTCMVDVLCRNSM 436
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M E P+ +T+N + G++D ++ D+MG SG P+ TYN
Sbjct: 437 FNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNE 496
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L K + A L+ M+ G + +++ + T++ G AG L +M +G
Sbjct: 497 LLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRG 556
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + ++I +Y G++ A L D + P++ Y S+I G C +EA
Sbjct: 557 TKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAI 616
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
++ M S G +PN +N LV +L
Sbjct: 617 VYLRRMLSEGISPNVATWNVLVRHL 641
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY +++ L + LL MK G S F +++ RAG+ + F M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ P V Y ++ + + + ++ M G PNVFTYN +++ C +
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
D A ++ EM S+GC+P+ + Y TL+S+L GK+ EA E+
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG--CMPDVVCYTVMITSYIAAGELE 202
F + L + +++ L+ +D +Y +M +G C D+ + +I SY AG E
Sbjct: 71 SFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDL--FISVIGSYRRAGSSE 128
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A F M P V YN ++ +F + M+ G PN YN L+
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L ++ AH+++ M KG
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKG 211
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 153/318 (48%), Gaps = 30/318 (9%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G + F +I + G + + ++ F + + F +P YN IL ALL ++++I
Sbjct: 106 GISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMI 165
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y M +G P++ TYNI++ A + ++D H+LL EM G PD +Y L+
Sbjct: 166 NPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISS 225
Query: 125 LGKGDK---------------PL---------------AALNLLNHMKEVGFDPSVLHFT 154
L K K P+ A LL+ M G DP+V+ +T
Sbjct: 226 LCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYT 285
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
T+++ LS AGN++ +M +GC P++ +T +I + G +A D +D MI +
Sbjct: 286 TIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE 345
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +PNV YN+++ G C +A ++ +ME GC PN Y+ L+ AG L A
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGA 405
Query: 275 HEVIRHMVEKGKYIHLVS 292
EV M+ G + ++V+
Sbjct: 406 SEVWNWMITHGCHPNVVA 423
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SY I++AL +L V +M G +P++ T+ ++ + G + D M
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRM 342
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G P+ YN L+H L A+++ N M+ G P+V ++ L+DG ++AG+L
Sbjct: 343 IREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDL 402
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D ++ M GC P+VV YT M+ +A L + M + PN T+N+
Sbjct: 403 DGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF 462
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I+G C +G+ D A + +M + GC PN YN L+ +L + EA +++ M +G
Sbjct: 463 IKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGI 522
Query: 287 YIHLVS 292
++LV+
Sbjct: 523 ELNLVT 528
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 1/245 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YNA++H L R V+ QM G P++ TY+ ++ + G LD +
Sbjct: 349 PNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEV 408
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M G P+ Y ++ VL + A L+ +M+ P+ + F T + GL
Sbjct: 409 WNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCG 468
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+G +D FD+M N GC P+ Y ++ S + +A L M +G N+ T
Sbjct: 469 SGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVT 528
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+C AG EA ++ +M RG P+ + N ++ GK+ A +++ +
Sbjct: 529 YNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL- 587
Query: 283 EKGKY 287
GK+
Sbjct: 588 SAGKW 592
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 115/262 (43%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG RT++ LI + G E + P +Y ++ L +
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + M E P+ +T+N + G++D ++ D+MG SG P+ TYN LL
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K + A L+ M+ G + +++ + T++ G AG L +M +G P
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D + ++I +Y G++ A L D + P++ Y S+I G C +EA +
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYL 619
Query: 244 KEMESRGCNPNFLVYNTLVSNL 265
+ M S G +PN +N LV +L
Sbjct: 620 RRMLSEGISPNVATWNVLVRHL 641
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY +++ L + LL MK G S F +++ RAG+ + F M
Sbjct: 78 TYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM 137
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ P V Y ++ + + + ++ M G PNVFTYN +++ C +
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
D A ++ EM S+GC+P+ + Y TL+S+L GK+ EA E+
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL 238
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+EN P T TFN I C G V A KV ++ S F P +YN +L +LL
Sbjct: 449 VENCPPNTV-TFNTFIKGLCGSGRVDWAIKVFDQMGNSGCF---PNTTTYNELLDSLLKD 504
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R++ + + M G +++TYN ++ G L + LL +M G PD T
Sbjct: 505 RRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITV 564
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI++ K K A+ L++ + + P ++ +T+L+ G+ ++ + M +
Sbjct: 565 NIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLS 624
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+G P+V + V++ + A D ++ G
Sbjct: 625 EGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSG 661
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 4/143 (2%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG--CMPDVVCYTVMITSYIAAGELE 202
F + L + +++ L+ +D +Y +M +G C D+ + +I SY AG E
Sbjct: 71 SFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDL--FISVIGSYRRAGSSE 128
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A F M P V YN ++ +F + M+ G PN YN L+
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L ++ AH+++ M KG
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSKG 211
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 130/243 (53%), Gaps = 3/243 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y I+ L + K + +M D+G +P+I TYN+++ KLD+ ++
Sbjct: 78 PTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKM 137
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+EM G+ PD TYN + L K D+ A L M P V+ +TT+++GL +
Sbjct: 138 LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCK 194
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+G+LD+ D+M N+GC PDVV Y+ +I + GE+E+A L D M+ G PN+
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS++ G +A M+ EME RG P+ + YN + L A ++ +A V MV
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314
Query: 283 EKG 285
E+G
Sbjct: 315 ERG 317
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T+N I C C V ARK + R P SY +++ L
Sbjct: 141 MAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM------PVTPDVVSYTTVINGLCK 194
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ QM++ G PD++TY+ ++ + G++++ LLD M + G P+
Sbjct: 195 SGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 254
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL L + A ++L M+ GF P V+ + +DGL +A + K FD M
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC P+ Y++++ EL+ A L + K Q+ ++ Y ++ G C G+FD
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374
Query: 238 EACTMM-KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EAC + K ++ + C P+ YN ++ + ++ +A ++ + M+E+
Sbjct: 375 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER 422
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 8/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++ LI C GEV A +++ +K RP +YN++L AL
Sbjct: 208 MTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK---LGCRPNMVAYNSLLGALHR 264
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + +M G+ PD+++YN + + ++ + + D M G +P+ +
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEM 176
Y++L+ L K + A+ L+ +E +L +T L+DGL + G D AC F +
Sbjct: 325 YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVL 384
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
K C PDV Y VM+ S+ +++KA + M+ + NV T+N ++ G C+ +
Sbjct: 385 DEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLER-NCCNVVTWNILVHGLCVDDRL 443
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A TM+ M G P+F+ Y TLV + GK A A E+ V+ G +V+
Sbjct: 444 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVT 499
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 32/283 (11%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P ++ +L L Q + + +M + G PD YN ++ + Q +
Sbjct: 7 QPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L EM ++ P TY ++ L K + A+ LL+ M++ G P++ + +++GL
Sbjct: 67 FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126
Query: 162 RAGNLDACKYFFDEMANKG--------------------------------CMPDVVCYT 189
LD K +EMA +G PDVV YT
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYT 186
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I +G+L+ A + D M +G P+V TY+S+I GFC G+ + A ++ M
Sbjct: 187 TVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 246
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
GC PN + YN+L+ L G + +A +++ M +G +VS
Sbjct: 247 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 289
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 143/287 (49%), Gaps = 9/287 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N+++ C ++ A+K++E F P +YN+ + G
Sbjct: 106 MRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF---PDVVTYNSFIK---G 159
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ + ++ PD+++Y V+ + G LD R+LD+M G +PD T
Sbjct: 160 LCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVT 219
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ KG + A+ LL+ M ++G P+++ + +L+ L R G++ + EM
Sbjct: 220 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 279
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PDVV Y I A ++KA+ +FD M+ +G PN +Y+ ++ C + D
Sbjct: 280 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELD 339
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+A T++++ + + L+Y L+ L G+ EA + ++++
Sbjct: 340 DAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE 386
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 3/215 (1%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D+ PD T+ I++ R +L++ +LL M G PD YN L+ K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M + P+V+ +T ++DGL +AG DEM +KGC P++ Y V
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ +L++A+ + + M +G P+V TYNS I+G C + DEA + M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPV-- 178
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y T+++ L +G L A ++ M +G
Sbjct: 179 -TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRG 212
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 134/299 (44%), Gaps = 24/299 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
M+E G A ++++L+ C E+ A +VE+ K ++ + Y +L L
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL----LYTVLLDGLC 368
Query: 57 GIRQYKLIEWVYQQMSDEGYA-PDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFS 112
++ ++ ++ DE PD+ YN+++ C + ++ K Q H+ + E
Sbjct: 369 KGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN----C 424
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
+ T+NIL+H L D+ A +L M + GF P + + TL+D + + G A
Sbjct: 425 CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALEL 484
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F+E GC+PDVV Y+ +IT + E+A LF + +V +N+MI G+
Sbjct: 485 FEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAE 537
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVS-NLRNAGKLAEAHEVIRHMVEKGKYIHL 290
G D + E+ PN + +S L A L +A + V+ G + L
Sbjct: 538 NGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDL 596
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 8/194 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++H L + E + M DEG+ PD +TY ++ A + GK L +E
Sbjct: 429 TWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA 488
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G PD TY+ L+ L + A L + V + ++ G + G+
Sbjct: 489 VKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILGYAENGSG 541
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE-LEKAQDLFDGMITKGQLPNVFTYNS 225
D F E+ P+ + I+ + E L KA+ LFD + G P++F N+
Sbjct: 542 DLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANT 601
Query: 226 MIRGFCMAGKFDEA 239
+I F G +EA
Sbjct: 602 LIDVFAKCGDLEEA 615
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 152/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI + TF+ILI C G+V A+ V+ +K N + +YN+++
Sbjct: 259 MISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKK---NVKLDVVTYNSLMDGYCL 315
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++Q + ++ M+ G PD+ +Y+I++ ++ +D+ +L +EM P+ T
Sbjct: 316 VKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVT 375
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K + AL L++ M + G +++ + +++D + + ++D ++
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIK 435
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD+ YTV+I G L+ AQ +F+ ++ KG PN++TY S+I GFC G FD
Sbjct: 436 EKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFD 495
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E M+ +M+ GC PN + Y L+ +L + +A +++R M+ +G
Sbjct: 496 EGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ LI C GE A +++ R + KL RP Y+ I+ ++
Sbjct: 154 VVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRR-VDGKLV--RPNVVMYSTIIDSMCK 210
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M + +PD++TY+ ++ +GKL L + M +P+ +T
Sbjct: 211 DKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYT 270
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++IL+ K K A N+L M + V+ + +LMDG ++ K F+ MA
Sbjct: 271 FSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMA 330
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PDV Y++MI + +++A LF+ M K PNV TYNS++ G C +G+
Sbjct: 331 QRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTS 390
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EM RG N + YN+++ + + +A ++ + EKG
Sbjct: 391 CALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKG 438
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+ A TF ILI C GEV A ++ + F+ + SY +++ L
Sbjct: 119 ILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQ---GFQLDQVSYGTLINGLCR 175
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + K + +++ + P+++ Y+ ++ + + ++ L EM SPD T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A++L N M +P+V F+ L+DG + G + K M
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K DVV Y ++ Y ++ KA+ LF+ M +G P+V++Y+ MI GFC D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + +EM + PN + YN+LV L +G+ + A E++ M ++G+ ++++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIIT 410
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + IL +LL +QY+ + QQM G PD +T N++M +LG + +
Sbjct: 56 PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++ + G+ PD T+ IL+ L + AL + + GF + + TL++GL R
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G A + K P+VV Y+ +I S + A DL+ M++K P+V T
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+S+I GFC+ GK A + M S NPN ++ L+ GK+ EA V+ M+
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 283 EKGKYIHLVS 292
+K + +V+
Sbjct: 296 KKNVKLDVVT 305
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 118/222 (53%), Gaps = 6/222 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V+ ++ +GY PD +T+ I+ +C K + K FH D++ GF D +Y L++
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFH---DKVVAQGFQLDQVSYGTLIN 171
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + + AA+ LL + P+V+ ++T++D + + ++ + EM +K P
Sbjct: 172 GLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISP 231
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV Y+ +I+ + G+L+ A DLF+ MI+ PNV+T++ +I GFC GK EA ++
Sbjct: 232 DVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVL 291
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M + + + YN+L+ ++ +A + M ++G
Sbjct: 292 AVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRG 333
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G +++I+I C V A K+ E ++F P +YN+++ L
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIF---PNVVTYNSLVDGLCK 385
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M D G +I+TYN ++ A + +D+ LL ++ G PD T
Sbjct: 386 SGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT 445
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L++ L K + A + + G+ P++ +T+L++G G D +M
Sbjct: 446 YTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ GC+P+ + Y ++I S E +KA+ L MI +G L
Sbjct: 506 DNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGLL 545
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ G A TFN LI +VG + VE F + +P +Y I++ L I +
Sbjct: 156 MIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++++M + G P+++TYNI++ + + +++ + M SPD TYN
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNS 275
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A LLN M + P++ F L+D + + G + + F M G
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y+ ++ Y E+ +A+ LFD MITKG P+ F+YN +I+G+C A + DEA
Sbjct: 336 VEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAK 395
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G P+ + YNTL+ L G+L EA ++ ++M G
Sbjct: 396 QLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNG 440
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+NILI + + L + ++ F K P +YN+++ L R+
Sbjct: 226 MEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + +M+ P+I T+N+++ A + GK+ + + M G PD TY+
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + + A L + M G P + L+ G +A +D K F+EM ++G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V Y +I G L +AQDLF M + G LP++FTY+ ++ GFC G +A
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M+S P+ +YN L+ + G L +A ++ + +G
Sbjct: 466 RLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 125/240 (52%), Gaps = 1/240 (0%)
Query: 47 SYNAILHALLGIRQY-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+ +L A++ + QY + + +QM G +PDI T +I++ L ++D + +
Sbjct: 96 QFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSK 155
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M + G PD T+N L++ L K K A+ + + G P+V +TT+++GL + G
Sbjct: 156 MIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGE 215
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
A F +M GC P+VV Y ++I S + +A D+F M K P++FTYNS
Sbjct: 216 TTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNS 275
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I+G C ++ EA ++ EM S PN +N LV + GK++EA V + M E G
Sbjct: 276 LIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMG 335
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN+L IC G+V A+ V + + P +Y+++++ + ++
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTE---MGVEPDVVTYSSLMYGYSLRMEIVEARKLF 363
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M +G PD +YNI++ + ++D+ +L +EM G +PD YN L+H L +
Sbjct: 364 DAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQL 423
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A +L +M G P + ++ L+DG + G L F M + PD+ Y
Sbjct: 424 GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMY 483
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I + G L+ A+ LF + +G LPNV Y ++I C G DEA + ME
Sbjct: 484 NILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEG 543
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ YN ++ + A ++I M ++G
Sbjct: 544 DGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 123/263 (46%), Gaps = 3/263 (1%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
V LA V + IK +P ++N +++ L + ++ + G P + T
Sbjct: 146 VDLAFSVFSKMIK---LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYT 202
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
Y ++ ++G+ L +M +G P+ TYNIL+ L K AL++ ++MK
Sbjct: 203 YTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMK 262
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
P + + +L+ GL +EM + MP++ + V++ + G++
Sbjct: 263 AKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVS 322
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+AQ +F M G P+V TY+S++ G+ + + EA + M ++GC P+ YN L+
Sbjct: 323 EAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILI 382
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EA ++ M+ +G
Sbjct: 383 KGYCKAKRIDEAKQLFNEMIHQG 405
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 70/171 (40%), Gaps = 36/171 (21%)
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE-------LEKAQDL--- 207
D S N+D F+ M ++ +P ++ +T ++++ + G+ L K +L
Sbjct: 67 DDASSFRNIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGL 126
Query: 208 --------------------------FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
F MI G P+ T+N++I G C GKF +A
Sbjct: 127 SPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVE 186
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ E+ GC P Y T+++ L G+ A + + M E G ++V+
Sbjct: 187 FFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVT 237
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 138/264 (52%), Gaps = 6/264 (2%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
+ G A K + +K+ P +Y I+ L + + + +M D+G +P+I
Sbjct: 92 DFGQAFKFLAEMVKNHCL---PTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIY 148
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
TYN+++ KLD+ ++L+EM G+ PD TYN + L K D+ A L M
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 208
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
P V+ +TT+++GL ++G+LD+ D M+N+GC PDVV Y+ +I + GE+
Sbjct: 209 P---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEV 265
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E+A L D M+ G PN+ YNS++ G +A M+ EME RG P+ + YN
Sbjct: 266 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC 325
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ L A ++ +A V MVE+G
Sbjct: 326 IDGLCKAERVKKAKAVFDRMVERG 349
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 117/239 (48%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +L L ++ V+Q+M D+ PD T+ I++ R +L++ +LL M
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD YN L+ K A L M + P+V+ +T ++DGL +A
Sbjct: 69 KEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERT 128
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DEM +KGC P++ Y V++ +L++A+ + + M +G P+V TYNS
Sbjct: 129 RDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSF 188
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I+G C + DEA + M P+ + Y T+++ L +G L A ++ HM +G
Sbjct: 189 IKGLCKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRG 244
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 141/334 (42%), Gaps = 56/334 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T+N I C C V ARK + R P SY +++ L
Sbjct: 173 MAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM------PVTPDVVSYTTVINGLCK 226
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTY---------------------------------- 83
+ MS+ G PD++TY
Sbjct: 227 SGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVA 286
Query: 84 -NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
N ++ A +RLG + + +L EM R GF+PD +YN + L K ++ A + + M
Sbjct: 287 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 346
Query: 143 EVGFDPS----------VLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVM 191
E G P+ +L +T L+DGL + G D AC F + K C PDV Y VM
Sbjct: 347 ERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVM 406
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ S+ +++KA + M+ K NV T+N ++ G C+ + +A TM+ M G
Sbjct: 407 LDSHCKRRQIDKALQIHKQMLEK-NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 465
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+F+ Y TLV + GK A A E+ V+ G
Sbjct: 466 IPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 32/283 (11%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P ++ +L L Q + + +M + G PD YN ++ + Q +
Sbjct: 39 QPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 98
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L EM ++ P TY ++ L K ++ A+ LL+ M++ G P++ + +++GL
Sbjct: 99 FLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 158
Query: 162 RAGNLDACKYFFDEMANKG--------------------------------CMPDVVCYT 189
LD K +EMA +G PDVV YT
Sbjct: 159 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYT 218
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I +G+L+ A + D M +G P+V TY+S+I GFC G+ + A ++ M
Sbjct: 219 TVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 278
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
GC PN + YN+L+ L G + +A +++ M +G +VS
Sbjct: 279 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVS 321
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 100/207 (48%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
GY ++ TYN ++ R + D+ + EM PD T+ ILL L + ++ A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
LL MKE+G P + L+ G S+A + F EM C+P VV YT ++
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
A A L D M KG PN++TYN ++ G C K DEA M++EM RG P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ YN+ + L ++ EA + + M
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM 208
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
G+ + TYN LL L + + A + M + P F L+ GL R+ L+
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ M GC+PD Y +I+ Y A + +A M+ LP V TY +++ G
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
C A + +A ++ EM +GC+PN YN +V L KL EA +++ M +G +
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 290 LVS 292
+V+
Sbjct: 182 VVT 184
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M GF ++N I C V A+ V +R ++ P +SY+ ++ +L
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVER---GCTPNASSYSMLIVDILL 366
Query: 57 ----------GIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLL 103
G R + + + ++ PD+ YN+++ C + ++ K Q H+ +
Sbjct: 367 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 426
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
E + T+NIL+H L D+ A +L M + GF P + + TL+D + +
Sbjct: 427 LEKN----CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 482
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
G A F+E GC+PDVV Y+ +IT + E+A LF ++ + +P+
Sbjct: 483 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPD 538
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 18/268 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +N L+ +G K + ++ + F P SYNA + L +
Sbjct: 275 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 334
Query: 61 YKLIEWVYQQMSDEGYAP----------DILTYNIVMCAKYRLGKLDQ----FHRLLDEM 106
K + V+ +M + G P DIL Y +++ + G+ D+ F ++LDE
Sbjct: 335 VKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDE- 393
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
PD YN++L K + AL + M E +V+ + L+ GL L
Sbjct: 394 --KICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRL 450
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ M ++G +PD V Y ++ + G+ A +LF+ + G +P+V TY+++
Sbjct: 451 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 510
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPN 254
I G +EA + ++ R P+
Sbjct: 511 ITGLVHENMAEEAYLLFTKLVERRWVPD 538
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 134/239 (56%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ILH L + + K + QM G PD+++Y++++ ++ +L + +L++E+
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEEL 313
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G P+ +TYN ++ L K + + A +L MK P + +TTL+ G ++GN+
Sbjct: 314 QRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNV 373
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
FDEM K +PD V YT MI AG++ +A+ LF M++KG P+ TY ++
Sbjct: 374 SVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL 433
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+C AG+ EA ++ +M +G PN + Y LV L G++ A+E++ M EKG
Sbjct: 434 IDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C ++G K++E + L +P + +YN+I+ L + E V + M ++
Sbjct: 298 CQVEQLGKVLKLMEELQRKGL---KPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIF 354
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y ++ + G + ++L DEM R PDF TY ++H L + K + A L
Sbjct: 355 PDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKL 414
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G P + +T L+DG +AG + ++M KG P+VV YT ++
Sbjct: 415 FSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCK 474
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GE++ A +L M KG PNV TYN++I G C G ++A +M+EM+ G P+ +
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ G++A+AHE++R M++KG
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 140/289 (48%), Gaps = 9/289 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V ARK+ + L +P + +Y A++ + K ++ QM ++G
Sbjct: 402 LCQAGKVVEARKLFSEMLSKGL---KPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL 458
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+++TY ++ + G++D + LL EM G P+ TYN L++ L K A+
Sbjct: 459 TPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVK 518
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M GF P + +TT+MD + G + M +KG P +V + V++ +
Sbjct: 519 LMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFC 578
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G LE + L M+ KG +PN T+NS+++ +C+ + K M ++G P+
Sbjct: 579 MSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTN 638
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
YN L+ A + EA + + MVEKG Y L+ F + K+
Sbjct: 639 TYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKK 687
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ LI C GE+ A + + ++ L P +Y A++ L
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGL---TPNVVTYTALVDGLCK 474
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +MS++G P++ TYN ++ ++G ++Q +L++EM +GF PD T
Sbjct: 475 CGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTIT 534
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ K + A LL M + G P+++ F LM+G +G L+ + M
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWML 594
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG MP+ + ++ Y + +++ GM +G +P+ TYN +I+G C A
Sbjct: 595 DKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMK 654
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + KEM +G + YN+L+ K EA ++ M G
Sbjct: 655 EAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHG 702
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+ L+ C CGEV +A +++ + L +P +YNA+++ L
Sbjct: 453 MVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGL---QPNVCTYNALINGLCK 509
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M G+ PD +TY +M A ++G++ + H LL M G P T
Sbjct: 510 VGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVT 569
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N+L++ L+ M + G P+ F +LM N+ A + M
Sbjct: 570 FNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMH 629
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +PD Y ++I + A +++A L M+ KG +YNS+I+GF KF+
Sbjct: 630 AQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFE 689
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA + +EM + G +Y+ V G E+ +EK
Sbjct: 690 EARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLELCDEAIEK 736
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 35/227 (15%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG- 159
R+ E G + +YNI+LH+L + K A +LL M+ G P V+ ++ ++DG
Sbjct: 238 RVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGY 297
Query: 160 ----------------------------------LSRAGNLDACKYFFDEMANKGCMPDV 185
L + G + + M N+ PD
Sbjct: 298 CQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDN 357
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V YT +I+ + +G + LFD M K +P+ TY SMI G C AGK EA + E
Sbjct: 358 VVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSE 417
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M S+G P+ + Y L+ AG++ EA + MVEKG ++V+
Sbjct: 418 MLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 98/213 (46%), Gaps = 3/213 (1%)
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG-DKP 131
D G P L +++ G L + +L D++ G + N+ L L D
Sbjct: 176 DWGAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGI 233
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + EVG + + + ++ L + G + +M +G +PDVV Y+V+
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ Y +L K L + + KG PN +TYNS+I C G+ EA +++ M+++
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRI 353
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ +VY TL+S +G ++ +++ M K
Sbjct: 354 FPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRK 386
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 134/240 (55%), Gaps = 1/240 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N ++ + ++ + + Q+M+ G D++TYN +M + G+L + +L
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M SG +PD Y+ ++ L K K L A +L M++ DP+V+ + T++DGL +
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 163 AGNLDACKYFFDEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+G +D ++MA+ GC +VV Y+ ++ G ++A+ + + M G P+V
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+S++ G C AGK +EA ++EM GC PN + Y +LV L + G+LAEA ++ M
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 151/314 (48%), Gaps = 18/314 (5%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T TFN LI C + +A ++++ S + +YN ++ L
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS---GVKADVVTYNTLMDGLCK 199
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E + ++M G APD++ Y+ + + GK+ H++L++M S P+ T
Sbjct: 200 AGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVT 259
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
YN +L L K K AL ++ M G +V+ ++T++DGL + G + + M
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
A GC PDVV Y+ ++ AG++E+A + M +G PN TY S++ G C G+
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 237 DEACTMMKEMESRG-----CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------ 285
EA M++EM S G C P+ YN L+ L AG++ +A + + M +G
Sbjct: 380 AEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439
Query: 286 KYIHLVSKFKRYKR 299
Y +V R R
Sbjct: 440 SYSTIVEGLARSGR 453
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 143/333 (42%), Gaps = 44/333 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P + TFN L+ G G +++E + +P SYN +L L
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR---DIQPNVVSYNGLLEGLCK 57
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDE---------- 105
+ ++ E + + M G PD++TY+ ++ + GK+++ LL E
Sbjct: 58 LERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117
Query: 106 -------------------------MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
M R+G P T+N L+ + A +LL
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G V+ + TLMDGL +AG L + + M GC PDVV Y+ + +G+
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPNFLVYN 259
+ A + + M PNV TYN+++ G C +GK D A MM++M S GC N + Y+
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
T+V L G+ EA V+ M G +V+
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVT 330
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 148/290 (51%), Gaps = 12/290 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+N L +C G + A +++ER K P +Y++ ++ L
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLCK 234
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFH 116
+ V +QM D + P+++TYN ++ + GK+D ++++M S G +
Sbjct: 235 SGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y+ ++ L K + A +++ M G P V+ +++L++GL +AG ++ EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-----PNVFTYNSMIRGFC 231
A +GC P+ V Y ++ + G L +A+ + + M + G P+V TYN++I G C
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLC 414
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
AG+ D+A + M S+GC+P+ + Y+T+V L +G+ +A ++ +
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 63/147 (42%), Gaps = 5/147 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T++ L+ + G + VE + + +P +Y +++H L +
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378
Query: 61 YKLIEWVYQQMSDEGYA-----PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
E + ++MS G P + TYN ++ + G++D + M G PD
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMK 142
+Y+ ++ L + + L A +L+ ++
Sbjct: 439 VSYSTIVEGLARSGRALQAEMILSEVR 465
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 133/240 (55%), Gaps = 1/240 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N ++ + ++ + + Q M+ G D++TYN +M + G+L + +L
Sbjct: 150 PTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQL 209
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M SG +PD Y+ ++ L K K L A +L M++ DP+V+ + T++DGL +
Sbjct: 210 LERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269
Query: 163 AGNLDACKYFFDEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+G +D ++MA+ GC +VV Y+ ++ G ++A+ + + M G P+V
Sbjct: 270 SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVV 329
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+S++ G C AGK +EA ++EM GC PN + Y +LV L + G+LAEA ++ M
Sbjct: 330 TYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 150/314 (47%), Gaps = 18/314 (5%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T TFN LI C + +A +++ S + +YN ++ L
Sbjct: 143 MIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS---GVKADVVTYNTLMDGLCK 199
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E + ++M G APD++ Y+ + + GK+ H++L++M S P+ T
Sbjct: 200 AGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVT 259
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
YN +L L K K AL ++ M G +V+ ++T++DGL + G + + M
Sbjct: 260 YNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAM 319
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
A GC PDVV Y+ ++ AG++E+A + M +G PN TY S++ G C G+
Sbjct: 320 ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRL 379
Query: 237 DEACTMMKEMESRG-----CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------ 285
EA M++EM S G C P+ YN L+ L AG++ +A + + M +G
Sbjct: 380 AEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGV 439
Query: 286 KYIHLVSKFKRYKR 299
Y +V R R
Sbjct: 440 SYSTIVEGLARSGR 453
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 142/333 (42%), Gaps = 44/333 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P + TFN L+ G G +++E +P SYN +L L
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR---GIQPNVVSYNGLLEGLCK 57
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDE---------- 105
+ ++ E + + M G PD++TY+ ++ + GK+++ LL E
Sbjct: 58 LERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117
Query: 106 -------------------------MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
M R+G P T+N L+ + A +LL
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G V+ + TLMDGL +AG L + + M GC PDVV Y+ + +G+
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPNFLVYN 259
+ A + + M PNV TYN+++ G C +GK D A MM++M S GC N + Y+
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
T+V L G+ EA V+ M G +V+
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVT 330
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 145/283 (51%), Gaps = 12/283 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+N L +C G + A +++ER K P +Y++ ++ L
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLCK 234
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFH 116
+ V +QM D + P+++TYN ++ + GK+D ++++M S G +
Sbjct: 235 SGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVV 294
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y+ ++ L K + A +++ M G P V+ +++L++GL +AG ++ EM
Sbjct: 295 GYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREM 354
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-----PNVFTYNSMIRGFC 231
A +GC P+ V Y ++ + G L +A+ + + M + G P+V TYN++I G C
Sbjct: 355 AMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLC 414
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
AG+ D+A + M S+GC+P+ + Y+T+V L +G+ +A
Sbjct: 415 KAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 151/285 (52%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G T TFN LI +VG + VE F ++P ++Y I++ L I +
Sbjct: 183 IIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGE 242
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++++M + G PD++TY+ ++ + + ++++ + M G SP+ TYN
Sbjct: 243 TVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A +LN M + P+++ F+ L++ + GN+ + M G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y+ ++ Y E+ +A+ LFD MITKG P+VF+YN +I G+C A + EA
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAK 422
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G P+ + YNTL+ L G+L EAH++ ++M+ G
Sbjct: 423 QLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNG 467
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+ G+ T+ +I C GE GL RK+ E +P +Y+ I+
Sbjct: 218 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEA-------GCQPDVVTYSTIID 270
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L R+ ++ M +G +P+I TYN ++ + + +L+EM P
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMP 330
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+++L+++ K A +L M E+G +P+V+ +++LM+G S + + F
Sbjct: 331 NIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLF 390
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M KGC PDV Y ++I Y A + +A+ LF+ MI +G P++ +YN++I G C
Sbjct: 391 DVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQL 450
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G+ EA + K M + G P+ Y+ L+ G LA+A + R M
Sbjct: 451 GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 498
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 134/252 (53%), Gaps = 1/252 (0%)
Query: 42 RPFKNSYNAILHALLGIRQY-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
RP +N +L A++ +R Y + + +QM G +PD T ++++ ++L ++D
Sbjct: 118 RPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGF 177
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L ++ + G T+N L++ L K K A+ L + M G+ P V +TT+++GL
Sbjct: 178 SVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGL 237
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G A F +M GC PDVV Y+ +I S + +A D+F M KG PN+
Sbjct: 238 CKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNI 297
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
FTYNS+I+G C ++ EA M+ EM S PN + ++ L++ G + EA V++
Sbjct: 298 FTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKT 357
Query: 281 MVEKGKYIHLVS 292
M E G ++V+
Sbjct: 358 MTEMGVEPNVVT 369
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + M++ G P+++TY+ +M ++ + +L D M G PD +YNIL++
Sbjct: 354 VLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYC 413
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A L N M G P ++ + TL+DGL + G L F M G +PD+
Sbjct: 414 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLC 473
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++++ + G L KA LF M + PN+ YN +I C + EA + E+
Sbjct: 474 TYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 533
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN +Y T+++ L G L EA E R+M E G
Sbjct: 534 FVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDG 572
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 135/286 (47%), Gaps = 24/286 (8%)
Query: 12 TFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
TF++LI C G V G+ + + E ++ + + N Y+ Q +++
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSL---------QAEVV 384
Query: 65 EW--VYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
E ++ M +G PD+ +YNI++ C R+G+ Q L +EM G +PD +YN
Sbjct: 385 EARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQ---LFNEMIHQGLTPDIVSYN 441
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L + + A +L +M G P + ++ L+DG + G L F M +
Sbjct: 442 TLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQST 501
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P++V Y ++I + + L++A+ LF + +G PNV Y ++I G C G DEA
Sbjct: 502 YLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEA 561
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ME GC PN YN ++ + A ++I M EKG
Sbjct: 562 LEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKG 607
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 102/225 (45%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++NILI C +G A+++ I L P SYN ++ L
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL---TPDIVSYNTLIDGLCQ 449
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +++ M G PD+ TY+I++ + G L + RL M + P+
Sbjct: 450 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 509
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ + K A L + + G P+V +TT+++GL + G LD F M
Sbjct: 510 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 569
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GC P+ Y V+I ++ + +A L M KG + +V T
Sbjct: 570 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 151/289 (52%), Gaps = 7/289 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P TA TF LI C G++G A + ++ + F+P +Y ++H L + +
Sbjct: 142 PDTA-TFTTLIRGLCVEGKIGEALHLFDKMVGE---GFQPNGVTYGTLIHGLCKVGNSRA 197
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + M + P+++TYN ++ ++ ++++ + EM G SP+ TYN ++H
Sbjct: 198 AIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIH 257
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K + L+N M + P+V+ FTTL+D L + G + D M +G P
Sbjct: 258 GLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV YT ++ + E+++A +FD M+ KG PNV +Y+++I G+C + D+A +
Sbjct: 318 DVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLF 377
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+EM R PN + YNTL+ L + G+L +A + MV G+ LV+
Sbjct: 378 EEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVT 426
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF-NFRPFKNSYNAILHALLGIR 59
M+ GF T+ LI +VG +R + R ++S + N P +YN I+ L R
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAI-RLLRSMVQKNCEPNVITYNTIIDCLFKDR 228
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q ++ +M +G +P++ TYN ++ + + L++EM S P+ +
Sbjct: 229 QVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFT 288
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K A ++++ M + G +P V+ +T LMDG +D FD M K
Sbjct: 289 TLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P+V+ Y+ +I Y ++KA LF+ M + +PN+ TYN++I G C G+ +A
Sbjct: 349 GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDA 408
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM + G P+ + Y L+ L L +A +++
Sbjct: 409 IALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK 448
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 121/243 (49%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + IL ++ ++ Y + + +QM G D+ T IV+ + L ++D +
Sbjct: 72 PSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSV 131
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M GF P+ + + TL+ GL +
Sbjct: 132 LAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCK 191
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M K C P+V+ Y +I ++ +A ++F MI KG PNV T
Sbjct: 192 VGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVST 251
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I G C ++ T+M EM PN +++ TLV L G + AH+V+ M+
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311
Query: 283 EKG 285
++G
Sbjct: 312 QRG 314
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 131/269 (48%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V +A VV+ I+ + P +Y A++ + + V+ M +G
Sbjct: 294 LCKEGMVTIAHDVVDVMIQRGV---EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP++++Y+ ++ ++ ++D+ L +EM + P+ TYN L+H L + A+
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P ++ + L+D L + +LD + PD+ Y ++I
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMC 470
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
GELE A DLF + +KG P+V+TY MI G C+ G EA + +EM + GC+P+
Sbjct: 471 RVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDC 530
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN + + A ++++ M+ +G
Sbjct: 531 TYNLITRGFLRNNETLSAIQLLQEMLGRG 559
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 132/286 (46%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ L+ C E+ A KV + ++ P SY+ +++
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK---GCAPNVISYSTLINGYCK 366
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ +++++M P+I+TYN ++ +G+L L EM SG PD T
Sbjct: 367 IQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVT 426
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ +L ++ P + + ++DG+ R G L+A F ++
Sbjct: 427 YRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLS 486
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PDV YT+MI G L +A LF M T G P+ TYN + RGF +
Sbjct: 487 SKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETL 546
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A +++EM RG + + +V L + G +++ V+
Sbjct: 547 SAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 35/245 (14%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ PD T+ ++ GK+ + L D+M GF P+ TY L+H L K AA
Sbjct: 139 GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAA 198
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-------------- 180
+ LL M + +P+V+ + T++D L + ++ F EM KG
Sbjct: 199 IRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHG 258
Query: 181 ---------------------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
MP+VV +T ++ + G + A D+ D MI +G P+
Sbjct: 259 LCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPD 318
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY +++ G C+ + DEA + M +GC PN + Y+TL++ ++ +A +
Sbjct: 319 VVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFE 378
Query: 280 HMVEK 284
M ++
Sbjct: 379 EMCQR 383
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 3/156 (1%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D+ L++ N + HM+ PSV+ F ++ ++ + +M + G DV
Sbjct: 56 DEALSSFNRMLHMQP---PPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I S+ ++ + + G P+ T+ ++IRG C+ GK EA + +M
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G PN + Y TL+ L G A ++R MV+K
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQK 208
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 51/121 (42%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D F+ M + P VV + ++TS L M + G +V+T
Sbjct: 54 TIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLA 113
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I FC + D +++ ++ G P+ + TL+ L GK+ EA + MV +
Sbjct: 114 IVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGE 173
Query: 285 G 285
G
Sbjct: 174 G 174
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 149/311 (47%), Gaps = 30/311 (9%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G + F +I T VGLA + ++ F + + F +P YN +L A+L ++++I
Sbjct: 109 GISCSEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMI 168
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E +Y M +G P++ TYNI++ A + ++D +LL EM G PD +Y ++
Sbjct: 169 EPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISS 228
Query: 125 LGKGDKPLAALN------------------------------LLNHMKEVGFDPSVLHFT 154
+ K K A LL M E G DP+V+ ++
Sbjct: 229 MSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYS 288
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
T++ LS GN++ + +M +GC P+V +T ++ Y G + +A ++++ M +
Sbjct: 289 TVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEE 348
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G PNV YN++I G C GK EA ++ +ME GC+PN Y L+ AG L A
Sbjct: 349 GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGA 408
Query: 275 HEVIRHMVEKG 285
E+ M+ G
Sbjct: 409 SEIWNKMMTNG 419
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 132/246 (53%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++ +L GI +L V+ +M G +P++ T+ +M + G++ + + + M
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
GF P+ YN L+H L K A+++ + M+ G P+V + L+DG ++AG+L
Sbjct: 346 AEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+++M GC+P+VV YT M+ + +A L + M T PN T+N+
Sbjct: 406 VGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTF 465
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I+G C +G+ + A + +ME GC+PN YN ++ L ++ EA E++ M EKG
Sbjct: 466 IKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGM 525
Query: 287 YIHLVS 292
++LV+
Sbjct: 526 ELNLVT 531
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 137/287 (47%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T++ +I + +G + + K + P ++ +++ +
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYF--MR 332
Query: 61 YKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+++E ++ +M++EG+ P+++ YN ++ GK+ + + +M R+G SP+ TY
Sbjct: 333 GRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTY 392
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A + N M G P+V+ +T++++ L R+ ++M+
Sbjct: 393 GALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMST 452
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
C P+ V + I +G +E A +LF M G PN+ TYN ++ G + E
Sbjct: 453 DNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKE 512
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EME +G N + YNT+ N GK EA +++ M+ G
Sbjct: 513 ALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 121/254 (47%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +YN ++H L + V +M G +P++ TY ++ + G L
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGAS 409
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+ ++M +G P+ Y +++VL + A +L+ M P+ + F T + GL
Sbjct: 410 EIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGL 469
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+G ++ F +M GC P++ Y ++ + +++A +L M KG N+
Sbjct: 470 CCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNL 529
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN++ GFC GKF+EA ++ +M G P+ + YNTL GK+ A +++
Sbjct: 530 VTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDK 589
Query: 281 MVEKGKYIHLVSKF 294
+ GK++ V+ +
Sbjct: 590 LSAGGKWVPEVAAY 603
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 1/181 (0%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY I++ LG+ LL MK G S F +++ R G + F +
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P V Y ++ + ++ + + ++ M G+ PNV+TYN +++ C +
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV-IRHMVEKGKYIHLVSKFK 295
D AC ++ EM ++GC P+ + Y T++S++ GK+ EA E+ IR Y L++ F
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFC 260
Query: 296 R 296
R
Sbjct: 261 R 261
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 126/281 (44%), Gaps = 10/281 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLF-NFRPFKNSYNAILHALL 56
M NG T+ LI G++ A ++ + + + N + + N + + +
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + LIE +MS + P+ +T+N + G+++ L +M + G SP+
Sbjct: 440 FSQAWSLIE----KMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIK 495
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN +L L K ++ AL L+ M+E G + +++ + T+ G G + +M
Sbjct: 496 TYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKM 555
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ-LPNVFTYNSMIRGFCMAGK 235
G PD + Y + +Y G+++ A L D + G+ +P V Y S++ G C
Sbjct: 556 LVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIG 615
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA-GKLAEAH 275
+EA + +M + G N +N LV L N+ G L H
Sbjct: 616 VEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIH 656
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 98/220 (44%), Gaps = 9/220 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + P TFN I C G V A + F + + + P +YN +L LL
Sbjct: 450 MSTDNCPPNTVTFNTFIKGLCCSGRVECA---INLFCQMEQYGCSPNIKTYNEVLDGLLK 506
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + +M ++G +++TYN + +GK ++ +LL +M G PD T
Sbjct: 507 ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAIT 566
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
YN L + K A+ LL+ + G + P V +T+L+ G+ ++ + D+M
Sbjct: 567 YNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKM 626
Query: 177 ANKGCMPDVVCYTVMITS-YIAAGELEKAQDLFDGMITKG 215
N+G + + ++ + + G L + D ++T G
Sbjct: 627 LNEGICLNAATWNALVRGLFNSLGHLGPIH-ILDDILTSG 665
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG--CMPDVVCYTVMITSYIAAGELE 202
F + L + +++ L R ++D +Y +M +G C D+ + +I +Y G E
Sbjct: 74 AFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDL--FINVINTYRRVGLAE 131
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A +F + G P V YN ++ +F + M+ G PN YN L+
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L ++ A +++ M KG +VS
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVS 221
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 6/259 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ L + + +M D G PD +T+N +M + GK ++ H LL M
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVM 71
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
P TYN L+ L K A L++ GF P V+ ++ L DGL + G +
Sbjct: 72 AERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRI 131
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D EM+ GC P++V Y +I A + EKA +L + +++ G +P+V TY +
Sbjct: 132 DEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTII 191
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG- 285
+ G C G+ D+A M++ M RGC P+ + Y L+ L G++ EAH + + MV K
Sbjct: 192 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDC 251
Query: 286 -----KYIHLVSKFKRYKR 299
Y+ LV+ + + R
Sbjct: 252 TADALAYVSLVNGYCKSSR 270
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/340 (28%), Positives = 159/340 (46%), Gaps = 44/340 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E + T+N LI C V A+ +V+ F+ S F P +Y+ + L
Sbjct: 71 MAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS---GFVPDVVTYSILADGLCK 127
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++MS G P+++TYN ++ + K ++ + LL+ + SGF PD T
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I++ L K + AL ++ M + G PSV+ +T LM+GL R G +D + F EM
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG--------------------------- 210
+K C D + Y ++ Y + ++AQ + DG
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIP 307
Query: 211 -----MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
M +G +PN+ TYN ++ G C GK DEA ++ M S GC P+ + YN ++ L
Sbjct: 308 NVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGL 367
Query: 266 RNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A K EA +V+ M++ G Y L+++F + +R
Sbjct: 368 FKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 6/270 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NILI C + A +++ + P ++N+I+ L +++ +
Sbjct: 12 TYNILIDGLCKASKTDKASEMLHEMVDR---GVTPDTVTFNSIMDGLCKAGKFERAHSLL 68
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M++ P TYN ++ + +D+ L+DE SGF PD TY+IL L K
Sbjct: 69 AVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKR 128
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L+ M G P+++ + TL+DGL +A + + + + G +PDVV Y
Sbjct: 129 GRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTY 188
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+KA + +GM+ +G P+V TY +++ G C G+ DEA + KEM S
Sbjct: 189 TIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVS 248
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ C + L Y +LV+ + + EA +V+
Sbjct: 249 KDCTADALAYVSLVNGYCKSSRTKEAQKVV 278
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 144/297 (48%), Gaps = 9/297 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ +GF T+ I++ C G + A K+VE +K P +Y A++ L
Sbjct: 176 LVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR---GCTPSVITYTALMEGLCR 232
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M + D L Y ++ + + + +++D G G +P
Sbjct: 233 TGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD--GIRG-TPYIDV 289
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + N+ M G P++ + +MDGL + G +D F + M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC+PDVV Y ++I A + ++A+ + D MI G P+ TYN+++ FC +FD
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFD 409
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+A ++K M G +P+ + YNTL+S L +L +A+E++ M+ G + + +
Sbjct: 410 DAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTY 466
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 124/265 (46%), Gaps = 11/265 (4%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN ++ L + + M G PD+++YNI++ ++ K + ++
Sbjct: 320 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQV 379
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LD+M ++G PD TYN L+ K ++ A+ +L +M + G DP + + TL+ GLS+
Sbjct: 380 LDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 439
Query: 163 AGNLDACKYFFDEMANKGCMPDV-VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
L EM GC+ Y +I G L++A L D M G N
Sbjct: 440 TNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 499
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN I C G+ DEA +++ EM++ + + Y T++ L A +L A ++ R M
Sbjct: 500 TYNIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREM 556
Query: 282 VE-KGKYIH------LVSKFKRYKR 299
V KG I L+ F + KR
Sbjct: 557 VAVKGLCITSHTFNLLIDAFTKTKR 581
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 126/269 (46%), Gaps = 8/269 (2%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
AR+V+++ I++ P +YN ++ ++ + + M G PD +TYN
Sbjct: 376 ARQVLDQMIQA---GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 432
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSG-FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ + +L + L+ EM R+G TYN ++ L K AL L++HM
Sbjct: 433 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 492
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G + + + + +D L + G LD EM + D V YT +I A +L++A
Sbjct: 493 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDT---LRDEVSYTTVIIGLCKAEQLDRA 549
Query: 205 QDLFDGMIT-KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
L M+ KG T+N +I F + DEA T+++ M RGC+P+ + YN +++
Sbjct: 550 SKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVIT 609
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L K+ +A E+ M +G VS
Sbjct: 610 CLCKLDKVDKAWELFDEMAVRGIVASSVS 638
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 136/327 (41%), Gaps = 40/327 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G P A T+N L+ C A +++ IK+ P +YN ++ L
Sbjct: 383 MIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA---GVDPDNVTYNTLISGLSQ 439
Query: 58 I-RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R E +++ + + TYN ++ + G L Q L+D M G +
Sbjct: 440 TNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 499
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMK----EVGFDPSVL--------------------- 151
TYNI + L K + A +LL+ M EV + ++
Sbjct: 500 TYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV 559
Query: 152 --------HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
F L+D ++ LD + M +GC P V+ Y ++IT +++K
Sbjct: 560 KGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDK 619
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A +LFD M +G + + +Y +I G C G+ EA +++EM S C + L L
Sbjct: 620 AWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYL 679
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHL 290
LR G+ EA E++R M K + L
Sbjct: 680 ALRGQGRGEEAAELLRRMTTKMDSLSL 706
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M E P V + L+DGL +A D EM ++G PD V + ++ AG+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA--------------------------- 233
E+A L M + P+ TYN++I G C
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 234 --------GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ DEA ++KEM GC PN + YNTL+ L A K +A+E++ +V G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 819
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 9/302 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQ 60
E+GF ++ LI G R+ V F K + +P +YN IL+ +G
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K+ V ++M +G APD TYN ++ R + ++ +EM +GFS D TYN
Sbjct: 261 NKITSLV-EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V GK +P A+ +LN M GF PS++ + +L+ +R G LD ++MA KG
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV YT +++ + AG++E A +F+ M G PN+ T+N+ I+ + GKF E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMM 439
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKF 294
+ E+ G +P+ + +NTL++ G +E V + M E+ + L+S +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 295 KR 296
R
Sbjct: 500 SR 501
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G A T+N LI C L ++ + F + K F K +YNA+L +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V +M G++P I+TYN ++ A R G LD+ L ++M G PD TY
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + K +A+++ M+ G P++ F + G FDE+ G
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V + ++ + G + +F M G +P T+N++I + G F++A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
T+ + M G P+ YNT+++ L G ++ +V+ M E G+
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGR 554
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 45/302 (14%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF TFN LI CG A V R + + + P ++YN +L AL
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV---TPDLSTYNTVLAALAR 536
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYN--------------------------------- 84
++ E V +M D P+ LTY
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 85 ----IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+++C+K L L + R E+ GFSPD T N ++ + G+ A +L++
Sbjct: 597 LKTLVLVCSKCDL--LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY 654
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
MKE GF PS+ + +LM SR+ + + E+ KG PD++ Y +I +Y
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A +F M G +P+V TYN+ I + F+EA +++ M GC PN YN+
Sbjct: 715 MRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 261 LV 262
+V
Sbjct: 775 IV 776
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V F + K F P + ++N ++ A ++ VY++M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK- 130
D G PD+ TYN V+ A R G +Q ++L EM P+ TY LLH G +
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 131 ----------------PLAAL-----------NLL-------NHMKEVGFDPSVLHFTTL 156
P A L +LL + +KE GF P + ++
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ R + D M +G P + Y ++ + + + K++++ ++ KG
Sbjct: 636 VSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ +YN++I +C + +A + EM + G P+ + YNT + + EA
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 277 VIRHMVEKG 285
V+R+M++ G
Sbjct: 756 VVRYMIKHG 764
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 127/277 (45%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ ++ ++ + L F P +YN+++ A
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ QM+++G PD+ TY ++ R GK++ + +EM +G P+ T+N + +
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
G K + + + + G P ++ + TL+ + G F EM G +P+
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ +I++Y G E+A ++ M+ G P++ TYN+++ G ++++ ++
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EME C PN L Y +L+ N ++ H + +
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 120/263 (45%), Gaps = 3/263 (1%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR-QYKLIEWVYQQMSDEGYAPDILTY 83
LA + + F+K K + NS AI+ ++LG + ++ + ++G++ D+ +Y
Sbjct: 153 LALRAFDWFMKQKDYQSM-LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSY 211
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL-NLLNHMK 142
++ A G+ + + +M G P TYN++L+V GK P + +L+ MK
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + TL+ R F+EM G D V Y ++ Y + +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A + + M+ G P++ TYNS+I + G DEA + +M +G P+ Y TL+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
S AGK+ A + M G
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAG 414
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 120/285 (42%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NGF + T+N LI G+ + +E + +P +Y +L +
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++++M + G P+I T+N + GK + ++ DE+ G SPD T+N
Sbjct: 400 VESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 459
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V G+ + MK GF P F TL+ SR G+ + + M + G
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAG 519
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ Y ++ + G E+++ + M PN TY S++ + +
Sbjct: 520 VTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +E+ S P ++ TLV L EA + E+G
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + ++ + G++PDI T N ++ R + + + +LD M GF+P TYN L+++
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYM 673
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + +L + G P ++ + T++ R + F EM N G +PD
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPD 733
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ Y I SY A E+A + MI G PN TYNS++ G+C + DEA ++
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Query: 245 EMESRGCNPN 254
++ R +P+
Sbjct: 794 DL--RNLDPH 801
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN I G G ++++ F + + P ++N +L + V+++M
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG--- 128
G+ P+ T+N ++ A R G +Q + M +G +PD TYN +L L +G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 129 ---DKPLAA----------------LNLLNHMKEVGF-------------DPSVLHFTTL 156
+K LA L+ + KE+G +P + TL
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTL 600
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ S+ L + F E+ +G PD+ M++ Y + KA + D M +G
Sbjct: 601 VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGF 660
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ TYNS++ + F ++ +++E+ ++G P+ + YNT++ ++ +A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 277 VIRHMVEKG 285
+ M G
Sbjct: 721 IFSEMRNSG 729
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I++ +LGK + +A N+ N ++E GF V +T+L+ + +G F +M
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 180 GCMPDVVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMI----RG----- 229
GC P ++ Y V++ + G K L + M + G P+ +TYN++I RG
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQE 297
Query: 230 --------------------------FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
+ + + EA ++ EM G +P+ + YN+L+S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 264 NLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
G L EA E+ M EKG Y L+S F+R
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFER 396
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+F + + M D ++I+ G + A ++F+G+ G +V++Y S+I F
Sbjct: 160 WFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+G++ EA + K+ME GC P + YN +++ GK+ I +VEK K
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVF---GKMGTPWNKITSLVEKMK 271
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 145/287 (50%), Gaps = 11/287 (3%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
++G T+N+LI C GE+ A +V++R N P +YN IL L
Sbjct: 120 QSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM------NVAPDVVTYNTILRTLCDSG 173
Query: 60 QYK-LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K +E + +Q+ E Y PD++TY I++ A + + Q +LLDEM G PD TY
Sbjct: 174 KLKQAMEVLDRQLQKECY-PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY 232
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+L++ + K + A+ LN+M G P+V+ ++ + G + +M
Sbjct: 233 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLR 292
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KGC P VV + ++I G L +A D+ + M G PN +YN ++ GFC K D
Sbjct: 293 KGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR 352
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + M SRGC P+ + YNTL++ L GK+ A E++ + KG
Sbjct: 353 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 150/294 (51%), Gaps = 12/294 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N ++ C G++ A +V++R ++ + + P +Y ++ A +
Sbjct: 161 TYNTILRTLCDSGKLKQAMEVLDRQLQKECY---PDVITYTILIEATCKESGVGQAMKLL 217
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G PD++TYN+++ + G+LD+ + L+ M G P+ T+NI+L +
Sbjct: 218 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCST 277
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + A LL+ M G PSV+ F L++ L R G L ++M GC P+ + Y
Sbjct: 278 GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 337
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + ++++A + D M+++G P++ TYN+++ C GK D A ++ ++ S
Sbjct: 338 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 397
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
+GC+P + YNT++ L GK A +++ M KG Y LVS R
Sbjct: 398 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+++ I + K WV + + G PD++TYN+++ + G++D ++LD M
Sbjct: 96 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM-- 153
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+PD TYN +L L K A+ +L+ + P V+ +T L++ + +
Sbjct: 154 -NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 212
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
DEM NKG PDVV Y V+I G L++A + M + G PNV T+N ++R
Sbjct: 213 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 272
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
C G++ +A ++ +M +GC+P+ + +N L++ L G L A +++ M
Sbjct: 273 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 6/275 (2%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G+ A V+E +S P +YN ++ G + I+ Q + A
Sbjct: 103 CRIGKTKKATWVMEILEQSGAV---PDVITYNVLIS---GYCKSGEIDNALQVLDRMNVA 156
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++TYN ++ GKL Q +LD + PD TY IL+ K A+ L
Sbjct: 157 PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKL 216
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M+ G P V+ + L++G+ + G LD F + M + GC P+V+ + +++ S +
Sbjct: 217 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCS 276
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G A+ L M+ KG P+V T+N +I C G A ++++M GC PN L
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L+ K+ A E + MV +G Y +V+
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 371
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N+LI + G + ++ + +P ++N IL ++ +
Sbjct: 220 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 279
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + M +G +P ++T+NI++ R G L + +L++M G +P+ +YN
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH K K A+ L+ M G P ++ + TL+ L + G +D +++++KG
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I G+ E+A L D M KG P++ TY+S++ G GK DEA
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++E G PN + YN+++ L + + A + + +M+ K
Sbjct: 460 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 3/217 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PDI+ ++ R+GK + +++ + +SG PD TYN+L+ K
Sbjct: 81 ESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKS 140
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL +L+ M P V+ + T++ L +G L D K C PDV+ Y
Sbjct: 141 GEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITY 197
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + + +A L D M KG P+V TYN +I G C G+ DEA + M S
Sbjct: 198 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 257
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + +N ++ ++ + G+ +A +++ M+ KG
Sbjct: 258 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 294
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + TFNILI GL + ++ K + P SYN +LH ++
Sbjct: 290 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 349
Query: 61 Y-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ IE++ M G PDI+TYN ++ A + GK+D +L+++ G SP TYN
Sbjct: 350 MDRAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYN 408
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K K A+ LL+ M+ G P ++ +++L+ GLSR G +D FF ++
Sbjct: 409 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 468
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ + Y ++ + + ++A D MI+K P TY +I G G EA
Sbjct: 469 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 528
Query: 240 CTMMKEMESRG 250
++ E+ SRG
Sbjct: 529 LDLLNELCSRG 539
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M G P+ L+YN ++ + K+D+ LD M G PD TYN LL L
Sbjct: 321 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 380
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A+ +LN + G P ++ + T++DGLS+ G + DEM KG PD++
Sbjct: 381 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 440
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +++ G++++A F + G PN TYNS++ G C + + D A + M
Sbjct: 441 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 500
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S+ C P Y L+ + G EA +++ + +G
Sbjct: 501 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G P ++ T+L+ G R G + + + G +PDV+ Y V+I+ Y
Sbjct: 80 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 139
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+GE++ A + D M P+V TYN+++R C +GK +A ++ + C P+ +
Sbjct: 140 SGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 196
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y L+ + +A +++ M KG +V+
Sbjct: 197 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 231
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G L+ F + M +G +PD++ T +I + G+ +KA + + + G +P+
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TYN +I G+C +G+ D A ++ M P+ + YNT++ L ++GKL +A EV+
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 280 HMVEKGKYIHLVS 292
++K Y +++
Sbjct: 184 RQLQKECYPDVIT 196
>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 819
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 154/302 (50%), Gaps = 9/302 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQ 60
E+GF ++ LI G R+ V F K + +P +YN IL+ +G
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPW 260
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K+ V ++M +G APD TYN ++ R + ++ +EM +GFS D TYN
Sbjct: 261 NKITSLV-EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNA 319
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V GK +P A+ +LN M+ GF PS++ + +L+ +R G LD ++MA KG
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV YT +++ + AG++E A ++F+ M G PN+ T+N+ I+ + GKF +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMM 439
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKF 294
+ E+ G +P+ + +NTL++ G +E V + M E+ + L+S +
Sbjct: 440 KIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 295 KR 296
R
Sbjct: 500 SR 501
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G A T+N LI C L ++ + F + K F K +YNA+L +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHR 329
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V +M G++P I+TYN ++ A R G LD+ L ++M G PD TY
Sbjct: 330 PKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + K +A+N+ M+ G P++ F + G FDE+ G
Sbjct: 390 LLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCG 449
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V + ++ + G + +F M G +P T+N++I + G F++A
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
T+ + M G P+ YNT+++ L G ++ +V+ M E G+
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGR 554
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V F + K F P + ++N ++ A ++ VY++M
Sbjct: 456 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM 515
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK- 130
D G PD+ TYN V+ A R G +Q ++L EM P+ TY LLH G +
Sbjct: 516 LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEI 575
Query: 131 ----------------PLAAL-----------NLL-------NHMKEVGFDPSVLHFTTL 156
P A L +LL + +KE GF P + ++
Sbjct: 576 GLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSM 635
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ R + D M +G P + Y ++ + + + K++++ ++ KG
Sbjct: 636 VSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGI 695
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ +YN++I +C + +A + EM G P+ + YNT + + EA
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 277 VIRHMVEKG 285
V+R+M++ G
Sbjct: 756 VVRYMIKHG 764
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 129/302 (42%), Gaps = 45/302 (14%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF TFN LI CG A V R + + + P ++YN +L AL
Sbjct: 480 MKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV---TPDLSTYNTVLAALAR 536
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYN--------------------------------- 84
++ E V +M D P+ LTY
Sbjct: 537 GGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVL 596
Query: 85 ----IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+++C+K L L + R E+ GFSPD T N ++ + G+ A +L++
Sbjct: 597 LKTLVLVCSKCDL--LPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDY 654
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
MKE GF PS+ + +LM SR+ + + E+ KG PD++ Y +I +Y
Sbjct: 655 MKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTR 714
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A +F M G +P+V TYN+ I + F+EA +++ M GC PN YN+
Sbjct: 715 MRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNS 774
Query: 261 LV 262
+V
Sbjct: 775 IV 776
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 129/277 (46%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ ++ ++ + +L F P +YN+++ A
Sbjct: 309 GFSHDKVTYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ QM+++G PD+ TY ++ R GK++ + +EM +G P+ T+N + +
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKM 428
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
G K + + + + + G P ++ + TL+ + G F EM G +P+
Sbjct: 429 YGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ +I++Y G E+A ++ M+ G P++ TYN+++ G ++++ ++
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EME C PN L Y +L+ N ++ H + +
Sbjct: 549 EMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEV 585
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 3/263 (1%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR-QYKLIEWVYQQMSDEGYAPDILTY 83
LA + F+K K + NS AI+ ++LG + ++ + ++G++ D+ +Y
Sbjct: 153 LALCAFDWFMKQKDYQSM-LDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSY 211
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL-NLLNHMK 142
++ A G+ + + +M G P TYN++L+V GK P + +L+ MK
Sbjct: 212 TSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMK 271
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + TL+ R F+EM G D V Y ++ Y + +
Sbjct: 272 SDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPK 331
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A + + M G P++ TYNS+I + G DEA + +M +G P+ Y TL+
Sbjct: 332 EAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
S AGK+ A + M G
Sbjct: 392 SGFERAGKVESAMNIFEEMRNAG 414
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 117/282 (41%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NGF + T+N LI G+ + +E + +P +Y +L + +
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++++M + G P+I T+N + GK ++ DE+ G SPD T+N LL
Sbjct: 403 AMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
V G+ + MK GF P F TL+ SR G+ + + M + G P
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D+ Y ++ + G E+++ + M PN TY S++ + + ++
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+E+ S P ++ TLV L EA + E+G
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERG 624
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + ++ + G++PDI T N ++ R + + + +LD M GF+P TYN L+++
Sbjct: 614 ERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYM 673
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + +L + G P ++ + T++ R + F EM + G +PD
Sbjct: 674 HSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRDSGIVPD 733
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ Y I SY A E+A + MI G PN TYNS++ G+C + DEA ++
Sbjct: 734 VITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Query: 245 EMESRGCNPN 254
++ R +P+
Sbjct: 794 DL--RNLDPH 801
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN I G G +++ F + + P ++N +L + V+++M
Sbjct: 421 TFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG--- 128
G+ P+ T+N ++ A R G +Q + M +G +PD TYN +L L +G
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMW 540
Query: 129 ---DKPLAA----------------LNLLNHMKEVGF-------------DPSVLHFTTL 156
+K LA L+ + KE+G +P + TL
Sbjct: 541 EQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTL 600
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ S+ L + F E+ +G PD+ M++ Y + KA ++ D M +G
Sbjct: 601 VLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGF 660
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ TYNS++ + F ++ +++E+ ++G P+ + YNT++ ++ +A
Sbjct: 661 TPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASR 720
Query: 277 VIRHMVEKG 285
+ M + G
Sbjct: 721 IFSEMRDSG 729
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 108/256 (42%), Gaps = 52/256 (20%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+++ +CA K + +LD I++ +LGK + +A NL N ++
Sbjct: 151 FDLALCAFDWFMKQKDYQSMLDN----------SVIAIVISMLGKEGRVSSAANLFNGLQ 200
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG-EL 201
E GF V +T+L+ + +G F +M +GC P ++ Y V++ + G
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPW 260
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMI----RG---------------------------- 229
K L + M + G P+ +TYN++I RG
Sbjct: 261 NKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNAL 320
Query: 230 ---FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG- 285
+ + + EA ++ EME G +P+ + YN+L+S G L EA E+ M EKG
Sbjct: 321 LDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT 380
Query: 286 -----KYIHLVSKFKR 296
Y L+S F+R
Sbjct: 381 KPDVFTYTTLLSGFER 396
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 159 GLSRAGNLDACKY-FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
G + +L C + +F + + M D ++I+ G + A +LF+G+ G
Sbjct: 146 GFHKKFDLALCAFDWFMKQKDYQSMLDNSVIAIVISMLGKEGRVSSAANLFNGLQEDGFS 205
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+V++Y S+I F +G++ EA + K+ME GC P + YN +++ GK+
Sbjct: 206 LDVYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVF---GKMGTPWNK 262
Query: 278 IRHMVEKGK 286
I +VEK K
Sbjct: 263 ITSLVEKMK 271
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 145/287 (50%), Gaps = 11/287 (3%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
++G T+N+LI C GE+ A +V++R N P +YN IL L
Sbjct: 177 QSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM------NVAPDVVTYNTILRTLCDSG 230
Query: 60 QYK-LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K +E + +Q+ E Y PD++TY I++ A + + Q +LLDEM G PD TY
Sbjct: 231 KLKQAMEVLDRQLQKECY-PDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTY 289
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+L++ + K + A+ LN+M G P+V+ ++ + G + +M
Sbjct: 290 NVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLR 349
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KGC P VV + ++I G L +A D+ + M G PN +YN ++ GFC K D
Sbjct: 350 KGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDR 409
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + M SRGC P+ + YNTL++ L GK+ A E++ + KG
Sbjct: 410 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 150/294 (51%), Gaps = 12/294 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N ++ C G++ A +V++R ++ + + P +Y ++ A +
Sbjct: 218 TYNTILRTLCDSGKLKQAMEVLDRQLQKECY---PDVITYTILIEATCKESGVGQAMKLL 274
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G PD++TYN+++ + G+LD+ + L+ M G P+ T+NI+L +
Sbjct: 275 DEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCST 334
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + A LL+ M G PSV+ F L++ L R G L ++M GC P+ + Y
Sbjct: 335 GRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSY 394
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + ++++A + D M+++G P++ TYN+++ C GK D A ++ ++ S
Sbjct: 395 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 454
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
+GC+P + YNT++ L GK A +++ M KG Y LVS R
Sbjct: 455 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 3/232 (1%)
Query: 50 AILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS 109
+++ I + K WV + + G PD++TYN+++ + G++D ++LD M
Sbjct: 154 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM--- 210
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
+PD TYN +L L K A+ +L+ + P V+ +T L++ + +
Sbjct: 211 NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 270
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
DEM NKG PDVV Y V+I G L++A + M + G PNV T+N ++R
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
C G++ +A ++ +M +GC+P+ + +N L++ L G L A +++ M
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I+ Q + APD++TYN ++ GKL Q +LD + PD TY IL+
Sbjct: 200 IDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIE 259
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K A+ LL+ M+ G P V+ + L++G+ + G LD F + M + GC P
Sbjct: 260 ATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP 319
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+V+ + +++ S + G A+ L M+ KG P+V T+N +I C G A ++
Sbjct: 320 NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDIL 379
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++M GC PN L YN L+ K+ A E + MV +G Y +V+
Sbjct: 380 EKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 428
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N+LI + G + ++ + +P ++N IL ++ +
Sbjct: 277 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 336
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + M +G +P ++T+NI++ R G L + +L++M G +P+ +YN
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH K K A+ L+ M G P ++ + TL+ L + G +D +++++KG
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I G+ E+A L D M KG P++ TY+S++ G GK DEA
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++E G PN + YN+++ L + + A + + +M+ K
Sbjct: 517 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 110/217 (50%), Gaps = 3/217 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PDI+ ++ R+GK + +++ + +SG PD TYN+L+ K
Sbjct: 138 ESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKS 197
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL +L+ M P V+ + T++ L +G L D K C PDV+ Y
Sbjct: 198 GEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITY 254
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + + +A L D M KG P+V TYN +I G C G+ DEA + M S
Sbjct: 255 TILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 314
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + +N ++ ++ + G+ +A +++ M+ KG
Sbjct: 315 YGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKG 351
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + TFNILI GL + ++ K + P SYN +LH ++
Sbjct: 347 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 406
Query: 61 Y-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ IE++ M G PDI+TYN ++ A + GK+D +L+++ G SP TYN
Sbjct: 407 MDRAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYN 465
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K K A+ LL+ M+ G P ++ +++L+ GLSR G +D FF ++
Sbjct: 466 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 525
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ + Y ++ + + ++A D MI+K P TY +I G G EA
Sbjct: 526 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 585
Query: 240 CTMMKEMESRG 250
++ E+ SRG
Sbjct: 586 LDLLNELCSRG 596
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M G P+ L+YN ++ + K+D+ LD M G PD TYN LL L
Sbjct: 378 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 437
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A+ +LN + G P ++ + T++DGLS+ G + DEM KG PD++
Sbjct: 438 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 497
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +++ G++++A F + G PN TYNS++ G C + + D A + M
Sbjct: 498 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 557
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S+ C P Y L+ + G EA +++ + +G
Sbjct: 558 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 3/155 (1%)
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G P ++ T+L+ G R G + + + G +PDV+ Y V+I+ Y
Sbjct: 137 LESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCK 196
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+GE++ A + D M P+V TYN+++R C +GK +A ++ + C P+ +
Sbjct: 197 SGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVIT 253
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y L+ + +A +++ M KG +V+
Sbjct: 254 YTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVT 288
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G L+ F + M +G +PD++ T +I + G+ +KA + + + G +P+
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TYN +I G+C +G+ D A ++ M P+ + YNT++ L ++GKL +A EV+
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 280 HMVEKGKYIHLVS 292
++K Y +++
Sbjct: 241 RQLQKECYPDVIT 253
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 146/284 (51%), Gaps = 5/284 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+ ++ C G+ A ++ + ++ +P Y+AI+ L
Sbjct: 203 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM--EEVSRIKPNVVIYSAIIDGLWK 260
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M ++G +P++ TYN ++ G+ + RLL EM SPD T
Sbjct: 261 DGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVT 320
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+++L++ L K K A L N M G P+ + + +++DG S+ LDA + F MA
Sbjct: 321 FSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PDV+ ++++I Y A ++ L M +G + N TY ++I GFC G +
Sbjct: 381 TKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLN 440
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A +++EM S G PN + NTL+ L N GKL +A E+ + M
Sbjct: 441 AALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 132/284 (46%), Gaps = 11/284 (3%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P +F ILI C+C ++ A + F K F P +++ +LH L +
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFA---LSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVS 163
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ Q+ P+++ + +M R G++ + LLD M G P+ TY ++
Sbjct: 164 EALHFFHQIC----KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 219
Query: 123 HVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K ++ALNLL M+EV P+V+ ++ ++DGL + G + F EM KG
Sbjct: 220 DGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGI 279
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++ Y MI + ++G +AQ L M + P+V T++ +I GKF EA
Sbjct: 280 SPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEE 339
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM RG PN + YN+++ +L A + M KG
Sbjct: 340 LYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG 383
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +++ ++ + + ++M + +PD++T+++++ A + GK + L +EM
Sbjct: 285 TYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEM 344
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ TYN ++ K ++ AA + M G P V+ F+ L+DG A +
Sbjct: 345 LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRV 404
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D EM+ +G + + + YT +I + G L A DL MI+ G PNV T N++
Sbjct: 405 DDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTL 464
Query: 227 IRGFCMAGKFDEACTMMKEMESR-----------GCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ G C GK +A M K M+ P+ YN L+ L N GK +EA
Sbjct: 465 LDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAE 524
Query: 276 EVIRHMVEKG 285
E+ M +G
Sbjct: 525 ELYEEMPHRG 534
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 46/338 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E TF++LI + G + E + + P +YN+++ +
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ M+ +G +PD++T++I++ ++D +LL EM R G + TY
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+H + AAL+LL M G P+V+ TL+DGL G L DA + F
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488
Query: 173 --------------------------------------FDEMANKGCMPDVVCYTVMITS 194
++EM ++G +PD + Y +I
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
L++A +FD M +KG P+V T+ ++I G+C G+ + + EM RG N
Sbjct: 549 LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVAN 608
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ Y TL+ G + A ++ + M+ G Y ++
Sbjct: 609 AITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTIT 646
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 107/243 (44%), Gaps = 11/243 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++H + + Q+M G P+++T N ++ GKL + M
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 107 GRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+S PD TYNIL+ L K A L M G P + + +
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++DGL + LD FD M +KG PDVV +T +I Y G + ++F M +G
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ N TY ++I GFC G + A + +EM S G P+ + +++ L + +L A
Sbjct: 605 IVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAV 664
Query: 276 EVI 278
+ +
Sbjct: 665 QCL 667
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 11/215 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-------FN-FRPFKNSYN 49
MI +G T N L+ C G++ A ++ + KSK+ FN P +YN
Sbjct: 449 MISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYN 508
Query: 50 AILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS 109
++ L+ ++ E +Y++M G PD +TYN V+ + +LD+ ++ D MG
Sbjct: 509 ILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSK 568
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
GFSPD T+ L++ K + L + M G + + + TL+ G + GN++
Sbjct: 569 GFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGA 628
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
F EM + G PD + M+T + EL++A
Sbjct: 629 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/293 (32%), Positives = 147/293 (50%), Gaps = 2/293 (0%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+I+ GF A TF+ LI C E AR +E F + ++P ++YN I+ I
Sbjct: 145 IIKLGFEPDAVTFSSLINGLCFEDKFAR-AMEFFDEMVASGYQPNLHTYNTIIKGFCKIG 203
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + ++M G PDI+ YN ++ + + + + E+ G PD TY+
Sbjct: 204 KTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYS 263
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
IL+H L D+ A L N M + P V+ F L+D L + G L + M K
Sbjct: 264 ILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEK 323
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ Y ++ Y ++ +A+ +FD MITKG +PNV +YN +I G+C A + DEA
Sbjct: 324 GVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEA 383
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM RG PN YNTL+S L AG+ EA E+ + M +G LV+
Sbjct: 384 RELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVT 436
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 151/295 (51%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G+ T+N +I C G+ +A ++++ K+ RP YN I+ L
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKA---GGRPDIVIYNTIIDGLCK 236
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ ++ +G PD+ TY+I+M + ++ L +EM PD T
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ L K A ++ M E G +P+ + +LM+G + + FD M
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGCMP+VV Y ++I Y A +++A++LFD M +G +PN F YN++I G C AG+
Sbjct: 357 TKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHC 416
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + K+M+++GC+P+ + L+ +L G L A + R M + +LV+
Sbjct: 417 EARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVT 471
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 137/276 (49%), Gaps = 6/276 (2%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
FNILI V A V+ + IK F P +++++++ L ++ +
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIK---LGFEPDAVTFSSLINGLCFEDKFARAMEFFD 178
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M GY P++ TYN ++ ++GK LL +M ++G PD YN ++ L K
Sbjct: 179 EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDR 238
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
AL++ + +K G P V ++ LM GL + + F+EM + MPDVV +
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFN 298
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ G L +AQ + MI KG PN TYNS++ G+C+ K EA + M ++
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + YN L++ A ++ EA E+ M +G
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRG 394
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 123/245 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N +++ +++ V ++ G+ PD +T++ ++ K + DEM
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG+ P+ HTYN ++ K K A+ LL M + G P ++ + T++DGL + +
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
F E+ KG PDV Y++++ + + E+A LF+ M++ +P+V T+N ++
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
C G EA ++K M +G PN+ YN+L++ K+ EA V M+ KG
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 288 IHLVS 292
++VS
Sbjct: 362 PNVVS 366
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 128/260 (49%), Gaps = 8/260 (3%)
Query: 34 IKSKLFNFR--------PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
I+ LF+F P ++ +L AL+ I+ Y + + +++ D+ +NI
Sbjct: 65 IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ RL ++D +L ++ + GF PD T++ L++ L DK A+ + M G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ P++ + T++ G + G +M G PD+V Y +I + +A
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D+F + KG P+VFTY+ ++ G C + + +EA + EM S P+ + +N LV L
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G L+EA +I+ M+EKG
Sbjct: 305 CKEGMLSEAQGIIKIMIEKG 324
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 121/247 (48%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L + ++ F + K RP +Y+ ++H L Q + ++ +M PD++T+N
Sbjct: 239 LVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFN 298
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
I++ + G L + ++ M G P++ TYN L++ +K A + + M
Sbjct: 299 ILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITK 358
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P+V+ + L++G +A +D + FDEM+ +G +P+ Y +I+ AG +A
Sbjct: 359 GCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEA 418
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++LF M +G P++ T ++ C G D A + + M+ PN + Y+ L+
Sbjct: 419 RELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRA 478
Query: 265 LRNAGKL 271
+ +GK+
Sbjct: 479 MYKSGKI 485
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 144/285 (50%), Gaps = 10/285 (3%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P + ++ ILI G++ A K+ +R + S P +YN ++H + Y
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDS---GITPSAVTYNVVIHGM--CLAYT 235
Query: 63 LIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L E + ++ M +G P T+NI++ A + GKLD+ RLL M G PD TY+
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A +LL M + P+V+ TL+ GL +AG + + D M + G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y ++ + AG+ E+A++L M+ +G PNV TY +++ G C A + EAC
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M+S GC PN Y L+ +AG++ ++ MV G
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 150/285 (52%), Gaps = 4/285 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G +A T+N++I + +E F + RP + ++N ++ A ++
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDA--HCKR 268
Query: 61 YKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
KL E + ++M+D+G+ PD++TY+ ++ + ++D LL++M + P T
Sbjct: 269 GKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQ 328
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+H L K + A +L+ M G P V+ + TL+ G RAG + + +M
Sbjct: 329 NTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVA 388
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G P+VV YT +++ A L +A +F M + G PN+FTY ++I GFC AG+ D
Sbjct: 389 RGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDG 448
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ EM G +P+ +VY TL + L +G+ A A E++R E
Sbjct: 449 GLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G R+ N +I + + + F + + + P SY ++ L +
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 65 EWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++Q+M D G P +TYN+V MC Y LD+ L M G P T+NIL
Sbjct: 205 YKLFQRMLDSGITPSAVTYNVVIHGMCLAY---TLDEALELFKSMRSKGCRPSRFTFNIL 261
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K K A LL M + G P V+ ++TL+ GL +D ++ ++M + C
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV +I AG +++A+++ D M++ GQ P+V TYN+++ G C AG+ + A
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M +RG PN + Y LVS L A +L EA V M G
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 141/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E + ++ ILI G++ AR + ++ + S P +Y +++H L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS---GVTPSTVAYTSLIHGLCM 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M+ G P +TYN+++ A + G L++ L+ +M G PD T
Sbjct: 58 ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K + AL L N M+ +G P+ T++ GL + +D F EM
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD Y ++I AG+L +A LF M+ G P+ TYN +I G C+A D
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLD 237
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + K M S+GC P+ +N L+ GKL EA +++ M + G +V+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVT 292
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 140/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G P + T+N++I + G+ + + K P +YN ++ L +
Sbjct: 71 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 130
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G P+ ++N ++ + K+DQ ++ EM PD +Y I
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGI 190
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A L M + G PS + + ++ G+ A LD F M +KG
Sbjct: 191 LIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P + ++I ++ G+L++A L M G +P+V TY+++I G C + D+A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++M R C P + NTL+ L AG++ EA EV+ MV G+ +V+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI C G++ A ++++R P +Y+ ++ L I + +
Sbjct: 257 TFNILIDAHCKRGKLDEAFRLLKRMTDD---GHVPDVVTYSTLISGLCSIARVDDARHLL 313
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M P ++T N ++ + G++ + +LD M SG SPD TYN L+H +
Sbjct: 314 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LL+ M G P+V+ +T L+ GL +A L F +M + GC P++ Y
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I + +AG+++ LF M+ G P+ Y ++ C +G+ A +++E
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
Query: 249 --RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
R VY V L AGK+ A +R MV G+
Sbjct: 494 SLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQ 533
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 43/286 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G T++ LI C+ V AR ++E +K + +P + N ++H L
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC---KPTVVTQNTLIHGLCK 337
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K V M G +PD++TYN ++ R G+ ++ LL +M G +P+ T
Sbjct: 338 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K ++ A + MK G P++ +T L+ G AG +D F EM
Sbjct: 398 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Query: 178 NKGCMPDVVCYTVM-------------------------------------ITSYIAAGE 200
G PD V Y + + + AG+
Sbjct: 458 CAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGK 517
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+E A M+ GQLP S++ G C +G+ EA +++E+
Sbjct: 518 MEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E TFNIL+ + G+ A+ V E I+ + P N+YNA++
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGV---EPNVNTYNALMDGYCS 234
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + ++ M +G AP + +YNI++ + G++D+ LL EM +PD T
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ + +P A LL M+ G P ++ ++ ++DGL + G+LD M
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P++ YT++I G+LE A++LF + KG P+V TY MI G G +
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC + ++M GC PN YN ++ G + A +I MV +G
Sbjct: 415 EACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 140/284 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G+ T++ +I ++G ++ K + +P Y+ I+ +L +
Sbjct: 73 MVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKL 132
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+M + G +P+++TY+ ++ LG+ ++ L +M PD T+NI
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K L A + M E G +P+V + LMDG +D + F+ M KG
Sbjct: 193 LVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKG 252
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P V Y ++I + +G +++A+ L M K P+ TY+++++GFC G+ +A
Sbjct: 253 CAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQ 312
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+++EM S G P+ + Y+ ++ L G L EA E+++ M E
Sbjct: 313 KLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQES 356
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 133/260 (51%), Gaps = 3/260 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A K+ + +K + P +Y+ I++ L + + + ++M ++G P+++ Y+
Sbjct: 66 AVKLFDEMVK---MGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYST 122
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ + + + + L EM G SP+ TY+ +LH + A +L M E
Sbjct: 123 IIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN 182
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P + F L+DGLS+ G + + F+ M KG P+V Y ++ Y + ++++AQ
Sbjct: 183 VMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQ 242
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF+ M+ KG P+V +YN +I+G C +G+ DEA ++ EM + P+ + Y+TL+
Sbjct: 243 KLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGF 302
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+ +A +++ M G
Sbjct: 303 CQDGRPQDAQKLLEEMRSYG 322
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 4/211 (1%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFH---RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
PD+ T I++ + D FH +L M + G P+ T++ LL+ L K + A
Sbjct: 8 PDVYTLTILINC-FCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L + M ++G++P V+ ++T+++GL + G+ +M KGC P+VV Y+ +I S
Sbjct: 67 VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ +A + M+ +G PNV TY+S++ GFC G+ +EA ++ K+M R P+
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +N LV L G + EA V M+EKG
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEKG 217
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + A ++++ +SK+ P Y ++ + + + ++ + +G
Sbjct: 337 LCKQGHLDEAFELLKAMQESKI---EPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGI 393
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD++TY +++ + G ++ L +M G P+ TYN+++ + A
Sbjct: 394 QPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGR 453
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M GF F L D SR
Sbjct: 454 LIEEMVGRGFSADSSTFQMLSDLESR 479
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ A K+++ ++ +P + +YN+I+ L I + E V ++M +
Sbjct: 304 CHLGELKKALKLMDDM---QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y ++ ++LG + ++ DEM SPD+ TY L+ G+G K + NL
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G P + +TTL+D +AG + +EM G P++V Y +I
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GEL+ A +L D M KG NV YNSM+ G C AG ++A +MKEME G +P+ +
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ G + +AH++++ M+++G
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 128/240 (53%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
SYN I+++L + + K + QM PD+++Y+ V+ LG+L + +L+D+
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M G P+ +TYN ++ +L K K A +L M P + +TTL+ G + G+
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ +FDEM +K PD + YT +I + G++ + Q+LF MI++G P+ TY +
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I +C AG+ A ++ EM G PN + Y L+ L G+L A+E++ M +KG
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFN---ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N +L+C G+ A KV+ + K+ P Y ++H +
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII---PDNVVYTTLIHGFFKLGHV 379
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M + +PD +TY ++ + GK+ + L EM G PD TY L
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ V K + + A +L N M ++G P+++ + L+DGL + G LD DEM KG
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+V Y M+ AG +E+A L M G P+ TY ++I +C G D+A
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM RG P + +N L++ G L + ++ M+EKG
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 117/228 (51%), Gaps = 1/228 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M G P+I+TY ++ + G+LD + LLDEM + G + YN +++ +
Sbjct: 455 LHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L+ M+ G DP + +TT++D R G++D EM ++G P VV
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ V++ + G LE L M+ KG +P+ TYN++++ C+ + + K M
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
++G P+ YN L+ A L EA + + M+EKG Y+ V+ +
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKG-YVPTVTSY 681
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G ++NI+I + +G ++ ++ + P SY+ ++ + + K
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ M +G P+ TYN ++ ++GK + ++L EM PD Y L+
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H K A + M P + +TTL+ G + G + + F EM ++G
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD V YT +I Y AGE+ A L + M+ G PN+ TY ++I G C G+ D A +
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G N +YN++V+ + AG + +A ++++ M G
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 135/294 (45%), Gaps = 20/294 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
M++ G T+ LI C GE+ A ++++ K L N + + N I A
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ KL+ ++M G PD +TY V+ A RLG +D+ H+LL EM G P
Sbjct: 519 IEQAIKLM----KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574
Query: 117 TYNILLH------VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
T+N+L++ +L GD+ LL M E G P + + TLM +++
Sbjct: 575 TFNVLMNGFCMLGMLEDGDR------LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+ M N+G PD Y ++I + A L++A L+ MI KG +P V +YN++I+ F
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
KF EA + +EM G + +YN V G + + +EK
Sbjct: 689 YKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 5/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P F ++ G + ARK++++ + + +S NA L + + IE
Sbjct: 190 PIAFDIFFQVLVEIGHLSEARKLLDKLLS---YGLVVTVDSCNAFLSRIAN--NSEGIEM 244
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + G + + +YNI++ + RLGK+ + HRLL +M +PD +Y+ ++
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL L++ M+ G P+ + +++ L + G + EM ++ +PD V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I + G + A FD M++K P+ TY ++I+GF GK E + EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
SRG P+ + Y TL+ AG++ A + MV+ G ++V+
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/319 (29%), Positives = 147/319 (46%), Gaps = 36/319 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALLGIR 59
M ENG T T+N LI G G + V+ + S+ N +P +YN ++ A +
Sbjct: 109 MQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKK 168
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ V +M G PD++TYN + A + G LDQ ++ EM +G P+ T
Sbjct: 169 RITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCG 228
Query: 120 ILLHVLGKGDKPLAAL-----------------------------------NLLNHMKEV 144
I++ K + AL +LN M+E
Sbjct: 229 IIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEF 288
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P V+ F+T+M+ S AG ++ C+ FD+M G PD Y+++ Y+ A E EKA
Sbjct: 289 GVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKA 348
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++L MI G PNV + ++I G+C AGK D A + +M RG +PN + TL+
Sbjct: 349 EELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWG 408
Query: 265 LRNAGKLAEAHEVIRHMVE 283
A + +A E+++ M E
Sbjct: 409 FAEARQPWKAEEILQIMTE 427
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 5/254 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG RT I++ + G R+ + + K P +N+++ + I
Sbjct: 215 MQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMD 274
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ V M + G PD++T++ +M A G +++ + D+M ++G PD H Y+I
Sbjct: 275 RDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSI 334
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + +P A LL M + GF P+V+ FTT++ G AG +D FD+M +G
Sbjct: 335 LAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRG 394
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++ + +I + A + KA+++ M P T + + G EA
Sbjct: 395 ISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEAN 454
Query: 241 TMM-----KEMESR 249
++ KEM +R
Sbjct: 455 RLLGTRNRKEMTNR 468
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 101/222 (45%), Gaps = 1/222 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P SY +L AL +++ I + Q+ + G PD + +N V+ A G ++
Sbjct: 45 KPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAME 104
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGL 160
+M +G P TYN L+ G KP ++ LL M + G P++ + L+
Sbjct: 105 TFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAW 164
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ +M G PDVV Y + T+Y G L++A+ + M G PN
Sbjct: 165 CNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNE 224
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
T ++ G+C G+ EA M+ G +PN +++N+L+
Sbjct: 225 RTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLI 266
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 1/193 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK + + + G P +Y LL L + + ++++ ++E G +P + F
Sbjct: 27 GKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFF 86
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+++ S +GN+++ F +M G P Y +I Y AG+ E++ L + M
Sbjct: 87 NAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQ 146
Query: 214 KGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G + PN+ TYN ++R +C + EA ++ +M + G P+ + YNT+ + G L
Sbjct: 147 EGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALD 206
Query: 273 EAHEVIRHMVEKG 285
+A VI M G
Sbjct: 207 QAEGVILEMQNNG 219
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 110/228 (48%), Gaps = 1/228 (0%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E ++ + + G+ P +++Y ++ A + D + ++ ++ +G +PD +N +++
Sbjct: 33 ESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINA 92
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-P 183
+ +A+ M+E G P+ + TL+ G AG + + M+ +G + P
Sbjct: 93 FSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKP 152
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
++ Y V++ ++ + +A ++ MI G P+V TYN++ + G D+A ++
Sbjct: 153 NLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVI 212
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
EM++ G PN ++S G++ EA M E G + +LV
Sbjct: 213 LEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLV 260
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 87/173 (50%), Gaps = 1/173 (0%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + KP A ++ + E G PS++ +TTL+ L+ D+ ++ G
Sbjct: 19 LMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENG 78
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + + +I ++ +G +E A + F M G P TYN++I+G+ +AGK +E+
Sbjct: 79 MNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESV 138
Query: 241 TMMKEMESRG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++ M G PN YN LV N ++ EA V+ M+ G +V+
Sbjct: 139 KLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVT 191
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 58/137 (42%)
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V T LM+ L G + F + G P ++ YT ++ + + +
Sbjct: 12 TVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSII 71
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ G P+ +N++I F +G + A +M+ G P YNTL+ A
Sbjct: 72 SQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIA 131
Query: 269 GKLAEAHEVIRHMVEKG 285
GK E+ +++ M ++G
Sbjct: 132 GKPEESVKLLELMSQEG 148
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ A K+++ ++ +P + +YN+I+ L I + E V ++M +
Sbjct: 304 CHLGELKKALKLMDDM---QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII 360
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y ++ ++LG + ++ DEM SPD+ TY L+ G+G K + NL
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNL 420
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G P + +TTL+D +AG + +EM G P++V Y +I
Sbjct: 421 FHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCK 480
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GEL+ A +L D M KG NV YNSM+ G C AG ++A +MKEME G +P+ +
Sbjct: 481 HGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAIT 540
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ G + +AH++++ M+++G
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRG 568
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 128/240 (53%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
SYN I+++L + + K + QM PD+++Y+ V+ LG+L + +L+D+
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M G P+ +TYN ++ +L K K A +L M P + +TTL+ G + G+
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ +FDEM +K PD + YT +I + G++ + Q+LF MI++G P+ TY +
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I +C AG+ A ++ EM G PN + Y L+ L G+L A+E++ M +KG
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFN---ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N +L+C G+ A KV+ + K+ P Y ++H +
Sbjct: 323 GLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKII---PDNVVYTTLIHGFFKLGHV 379
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M + +PD +TY ++ + GK+ + L EM G PD TY L
Sbjct: 380 RTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTL 439
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ V K + + A +L N M ++G P+++ + L+DGL + G LD DEM KG
Sbjct: 440 IDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGL 499
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+V Y M+ AG +E+A L M G P+ TY ++I +C G D+A
Sbjct: 500 QLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHK 559
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM RG P + +N L++ G L + ++ M+EKG
Sbjct: 560 LLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKG 603
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%), Gaps = 6/239 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M G P+I+TY ++ + G+LD + LLDEM + G + YN +++ +
Sbjct: 455 LHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGIC 514
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L+ M+ G DP + +TT++D R G++D EM ++G P VV
Sbjct: 515 KAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ V++ + G LE L M+ KG +P+ TYN++++ C+ + + K M
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
++G P+ YN L+ A L EA + + M+EKG Y L+ +F + K+
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKK 693
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G ++NI+I + +G ++ ++ + P SY+ ++ + + K
Sbjct: 251 EYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELK 310
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ M +G P+ TYN ++ ++GK + ++L EM PD Y L+
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLI 370
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H K A + M P + +TTL+ G + G + + F EM ++G
Sbjct: 371 HGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD V YT +I Y AGE+ A L + M+ G PN+ TY ++I G C G+ D A +
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G N +YN++V+ + AG + +A ++++ M G
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAG 533
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 5/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P F ++ G + ARK++++ + + +S NA L + + IE
Sbjct: 190 PIAFDIFFQVLVEIGHLSEARKLLDKLLS---YGLVVTVDSCNAFLSRIAN--NSEGIEM 244
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + G + + +YNI++ + RLGK+ + HRLL +M +PD +Y+ ++
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL L++ M+ G P+ + +++ L + G + EM ++ +PD V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I + G + A FD M++K P+ TY ++I+GF GK E + EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
SRG P+ + Y TL+ AG++ A + MV+ G ++V+
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVT 470
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 20/294 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
M++ G T+ LI C GE+ A ++++ K L N + + N I A
Sbjct: 459 MVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGN 518
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ KL+ ++M G PD +TY V+ A RLG +D+ H+LL EM G P
Sbjct: 519 IEQAIKLM----KEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVV 574
Query: 117 TYNILLH------VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
T+N+L++ +L GD+ LL M E G P + + TLM +++
Sbjct: 575 TFNVLMNGFCMLGMLEDGDR------LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTT 628
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+ M N+G PD Y ++I + A L++A L+ MI KG +P V +YN++I+ F
Sbjct: 629 KIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRF 688
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
K EA + +EM G + +YN V G + + +EK
Sbjct: 689 YKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
>gi|302754000|ref|XP_002960424.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
gi|300171363|gb|EFJ37963.1| hypothetical protein SELMODRAFT_74408 [Selaginella moellendorffii]
Length = 321
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 142/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T TF IL+ C + A ++VE + F P +N I+ AL
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMAERGCF---PNALVFNGIMDALCK 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G +P I+TYNI++ + KL + +L EM G P+ T
Sbjct: 58 EGRSAEAYGYIETMRSMGVSPTIVTYNILIDGFCKEEKLHRALEILQEMTGRGHEPNHVT 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LH L K K AL L M E V +TTL+DGL +AG L DEM
Sbjct: 118 YNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N GC+P CY +++ + +A LF M G LP+ T+ M+ G+C + D
Sbjct: 178 NSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRID 237
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++++M+S G P ++YNTL+ L AG+++EA+ +++ M+ +G
Sbjct: 238 DALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG 285
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 96/223 (43%), Gaps = 2/223 (0%)
Query: 5 GFPTTARTFNILICT-CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
G T T+NILI C E L R +E + P +YN LH L +
Sbjct: 75 GVSPTIVTYNILIDGFCKEEKLHR-ALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDD 133
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+++ M+++ D+ Y ++ + GKL + + LLDEM SG P YN +L
Sbjct: 134 ALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILS 193
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L KG + A L M G P L F ++ G R +D +M + G P
Sbjct: 194 WLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAP 253
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
V Y +I + AG + +A L MI++G PN TY M
Sbjct: 254 REVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 147/285 (51%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P++ T N+L+ + G +V+ + FRP + ++N++++ L I
Sbjct: 272 MVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGH 331
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + M EG+ PDI TYN ++ +LG++++ +L++M FSP+ TYN
Sbjct: 332 VKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNT 391
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K ++ A L + G P V F +L+ GL N F+EM KG
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG 451
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD Y ++I S + G LE+A L M + G NV TYN++I GFC + +EA
Sbjct: 452 CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EME +G + N + YNTL+ L ++ EA +++ M+ +G
Sbjct: 512 EIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEG 556
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 148/293 (50%), Gaps = 16/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF T+N LI C GEV A +++ + I L +F P +YN ++ L
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI---LRDFSPNTVTYNTLISTLCK 398
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYN-----IVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
Q + + + ++ +G PD+ T+N + + +RL L +EM G
Sbjct: 399 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA-----MELFEEMKTKGCH 453
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
PD TYN+L+ L + AL+LL M+ G +V+ + TL+DG + ++ +
Sbjct: 454 PDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEI 513
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
FDEM +G +VV Y +I +E+A L D M+ +G P+ FTYNS++ FC
Sbjct: 514 FDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCR 573
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG +A +++ M S GC P+ + Y TL+ L AG++ A ++R + KG
Sbjct: 574 AGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 126/239 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +L+ L+ + KL+E V +M G PD+ T+NI++ A R ++ +++EM
Sbjct: 178 TYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G G SPD T+ L+ + AL + M G S + L+ G + G +
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRI 297
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F DEM+N+G PD + ++ G ++ A ++ D M+ +G P++FTYNS+
Sbjct: 298 EEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSL 357
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G C G+ +EA ++ +M R +PN + YNTL+S L ++ EA E+ R + KG
Sbjct: 358 IFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 149/305 (48%), Gaps = 6/305 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G TFNILI R + + + P + ++ ++ +
Sbjct: 202 MVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGN 261
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +QM G +T N+++ + G++++ +DEM GF PD T+N
Sbjct: 262 MNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNS 321
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + AL +L+ M + GFDP + + +L+ GL + G ++ ++M +
Sbjct: 322 LVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD 381
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y +I++ ++E+A +L + +KG LP+V T+NS+I+G C+ A
Sbjct: 382 FSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAM 441
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
+ +EM+++GC+P+ YN L+ +L + G+L EA +++ M G Y L+ F
Sbjct: 442 ELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGF 501
Query: 295 KRYKR 299
+ KR
Sbjct: 502 CKNKR 506
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 98/217 (45%), Gaps = 1/217 (0%)
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V M +E G D TYN ++ KL + M G PD T+NIL+ L
Sbjct: 162 VVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKAL 221
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + A+ ++ M G P FTTLM G GN++ ++M GC
Sbjct: 222 CRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSN 281
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V V++ Y G +E+ D M +G P+ FT+NS++ G C G A ++
Sbjct: 282 VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDV 341
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
M G +P+ YN+L+ L G++ EA E++ M+
Sbjct: 342 MLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMI 378
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 135/323 (41%), Gaps = 40/323 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
MI F T+N LI T + + E R + SK P ++N+++ L
Sbjct: 377 MILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSK--GILPDVCTFNSLIQGLCLT 434
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++L ++++M +G PD TYN+++ + G+L++ LL EM SG S + TY
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS----------------- 161
N L+ K + A + + M+ G +V+ + TL+DGL
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLM 554
Query: 162 ------------------RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
RAG++ M + GC PD V Y +I AG +E
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVEL 614
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A L + KG + TYN +I+ + EA + +EM +G P+ + Y +
Sbjct: 615 ASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFR 674
Query: 264 NL-RNAGKLAEAHEVIRHMVEKG 285
L G + EA + + M +KG
Sbjct: 675 GLCSGGGPIGEAVDFLVEMTDKG 697
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 36/221 (16%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ ++ + E ++ +M +G + +++TYN ++ + ++++ +L+D+M
Sbjct: 493 TYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TYN LL + A +++ M G +P + + TL+ GLS+AG +
Sbjct: 553 LMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRV 612
Query: 167 DACKYF-----------------------------------FDEMANKGCMPDVVCYTVM 191
+ F EM KG PD V Y V+
Sbjct: 613 ELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672
Query: 192 ITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+ G + +A D M KG LP+ ++ + G C
Sbjct: 673 FRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLC 713
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 142/309 (45%), Gaps = 30/309 (9%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + F +I L + ++ F + + F P YN +L ALL +K+I
Sbjct: 106 PCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINA 165
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD------------ 114
+Y M EG P++ TYN+++ A + GK+D +LL EM G PD
Sbjct: 166 LYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMC 225
Query: 115 ------------------FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
YN L+H + K + A +L+N M + G DP+V+ ++T+
Sbjct: 226 KLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTV 285
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ LS GN++ F M +GC P+V +T +I + G + A L++ MI +G
Sbjct: 286 ISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGV 345
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
PNV YN++I G C G DEA ++ +ME PN Y+T++ +G L A E
Sbjct: 346 SPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACE 405
Query: 277 VIRHMVEKG 285
M+ G
Sbjct: 406 TWNKMINCG 414
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 142/303 (46%), Gaps = 43/303 (14%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V AR++ +F P YNA++H + ++K + +M D G
Sbjct: 224 MCKLGDVDKARELAMKF--------EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGV 275
Query: 77 APDILTYNIVMCAKYRLGKLD--------QFHR--------------------------- 101
P++++Y+ V+ +G ++ F R
Sbjct: 276 DPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVG 335
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L + M R G SP+ YN L+H L A+++ N M++ P+V ++T++ G +
Sbjct: 336 LWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFA 395
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
++G+L + +++M N GC P+VV YT M+ ++A DL D MI+ G P V
Sbjct: 396 KSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVI 455
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+N+ I+G C AG+ + A ++ +ME C PN YN L+ L A EA +IR +
Sbjct: 456 TFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIREL 515
Query: 282 VEK 284
E+
Sbjct: 516 EER 518
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 130/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +++ +I ++G + F + + RP ++ +++ +
Sbjct: 270 MVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGR 329
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M EG +P+++ YN ++ G +D+ + ++M + P+ TY+
Sbjct: 330 VGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYST 389
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K ++A N M G P+V+ +T ++D L + D D M + G
Sbjct: 390 IIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDG 449
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P V+ + I AG +E A ++ D M LPN+ TYN ++ G A F EAC
Sbjct: 450 CPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREAC 509
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++E+E R + + YNT++ G + +++ M+ G
Sbjct: 510 GLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG 554
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 92/206 (44%), Gaps = 30/206 (14%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY ++ LG+ ++ LL MK S F ++ R+ + F +
Sbjct: 76 TYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRI 135
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P V Y +++ + ++ + L++ M ++G PNVFTYN +++ C GK
Sbjct: 136 REFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKV 195
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG--------------------------- 269
D AC ++ EM ++GC+P+ + Y T++S++ G
Sbjct: 196 DGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVC 255
Query: 270 ---KLAEAHEVIRHMVEKGKYIHLVS 292
+ EA +++ MV++G +++S
Sbjct: 256 KECRFKEAFDLMNEMVDRGVDPNVIS 281
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/296 (19%), Positives = 123/296 (41%), Gaps = 7/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G +N LI C+ G + A V + K + RP +Y+ I++
Sbjct: 340 MIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSI---RPNVTTYSTIIYGFAK 396
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M + G P+++ Y ++ ++ DQ L+D M G P T
Sbjct: 397 SGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVIT 456
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N + L + + A+N+L+ M++ P++ + L+DGL RA E+
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELE 516
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ D V Y ++ + G ++ L M+ G + T N+ + +C GK
Sbjct: 517 ERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVK 576
Query: 238 EACTMMKEMES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ + + + + + + ++ + N EA + M+++G + ++ +
Sbjct: 577 TAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIAT 632
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 5/168 (2%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEM--A 177
++ VL + +++L + G F + L + T++D L R +D Y +M
Sbjct: 44 VVKVLRQEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N C ++ + +I Y + E+ +F + G P+V YN ++ F
Sbjct: 104 NVPCSQEL--FQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFK 161
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S G PN YN L+ L GK+ A +++ M KG
Sbjct: 162 MINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKG 209
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 142/268 (52%), Gaps = 4/268 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C V AR+++E+ + P +Y I+ L ++ ++M+ G
Sbjct: 90 LCKLNRVEEARELIEKMARYA----PPDALTYGPIVERLCKTKRIDDALATVEEMATRGI 145
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD YN V+ + K+++ L ++M + +P+ TYN L++ L K + A
Sbjct: 146 KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYE 205
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M G+ P+ + + TL+DG + +L A K FD+M C+P+VV YT +I
Sbjct: 206 LFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLS 265
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G+++ A ++ DGM+ KG PNV TY+ +I GFC + DEA ++++M ++G P +
Sbjct: 266 KSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVV 325
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
YN L+++L A KL +A ++ R M ++
Sbjct: 326 TYNILLNSLCRADKLEDAFKLFRGMAQR 353
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G A +N ++ C +V AR + E+ +K ++ P +YN +++ L
Sbjct: 140 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI---NPNVVTYNTLINGLCK 196
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++++M+ +GY P ++YN ++ + L + D+M RS P+ T
Sbjct: 197 AWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVT 256
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K K AA +L+ M + G P+V ++ L+DG + +D ++M
Sbjct: 257 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 316
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P VV Y +++ S A +LE A LF GM + P V TYN+++R C + D
Sbjct: 317 TQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 376
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + EM ++GC P+ + Y+TL L AGK+ EA E++ M
Sbjct: 377 GAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 29 VVERFIKSKLFN-------------FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
+VER K+K + +P YN +L L + + ++++M +
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
P+++TYN ++ + +++ + L EM G+ P +YN L+ K +AA
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++ + M P+V+ +TTL+DGLS++G + A D M KG P+V Y+ +I +
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+++A L + M+T+G P V TYN ++ C A K ++A + + M R C+P
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNTL+ L + +L AH + M+ KG
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKG 389
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 114/277 (41%), Gaps = 34/277 (12%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N + + + ++ VYQ M + GY Y I++ ++G D+ ++L
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 103 LDEMGRSGFS----------------------------------PDFHTYNILLHVLGKG 128
L M F PD TY ++ L K
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERLCKT 127
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL + M G P + ++ GL + ++ + F++M + P+VV Y
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTY 187
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I A +E A +LF M KG +P +YN++I GFC A + +M
Sbjct: 188 NTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVR 247
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PN + Y TL+ L +GK+ A EV+ MV+KG
Sbjct: 248 SNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKG 284
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ T+N LI + E F + + P + SYN ++ +
Sbjct: 175 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 234
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ +M P+++TY ++ + GK+ +LD M + G +P+ TY+
Sbjct: 235 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 294
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + A LL M G P+V+ + L++ L RA L+ F MA +
Sbjct: 295 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P VV Y ++ + +L+ A L+ MI KG P+ TY+++ G AGK EA
Sbjct: 355 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 414
Query: 241 TMMKEMESRGCNP 253
+M++M+ NP
Sbjct: 415 ELMEKMKLTKRNP 427
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
MA + +P + + + AG LE+ ++++ GM+ G Y +I C G
Sbjct: 1 MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
FDEA ++ M + + Y+T+++ L ++ EA E+I M
Sbjct: 61 FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM 106
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 144/278 (51%), Gaps = 11/278 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK-LIEWV 67
T+N+LI C GE+ A +V+ER + P +YN IL +L + K +E +
Sbjct: 178 TYNVLIGGYCKSGEIDKALEVLERM------SVAPDVVTYNTILRSLCDSGKLKEAMEVL 231
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+Q+ E Y PD++TY I++ A + Q +LLDEM + G PD TYN+L++ + K
Sbjct: 232 DRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 290
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A+ LN+M G P+V+ ++ + G + +M KGC P VV
Sbjct: 291 EGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVT 350
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++I L +A D+ + M G +PN +YN ++ GFC K D A ++ M
Sbjct: 351 FNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 410
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SRGC P+ + YNTL++ L GK+ A E++ + KG
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 144/277 (51%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N ++ C G++ A +V++R ++ + + P +Y ++ A +
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQRECY---PDVITYTILIEATCNDSGVGQAMKLL 266
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G PD++TYN+++ + G+LD+ + L+ M G P+ T+NI+L +
Sbjct: 267 DEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCST 326
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + A LL+ M G PSV+ F L++ L R L ++M GC+P+ + Y
Sbjct: 327 GRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSY 386
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + ++++A + + M+++G P++ TYN+++ C GK D A ++ ++ S
Sbjct: 387 NPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSS 446
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC+P + YNT++ L GK A E++ M KG
Sbjct: 447 KGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKG 483
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 145/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N+LI + G + ++ + +P ++N IL ++ +
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + M +G +P ++T+NI+ +C K LG+ +L++M + G P+ +
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAID---VLEKMPKHGCVPNSLS 385
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LLH + K A+ L M G P ++ + TL+ L + G +DA ++++
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC P ++ Y +I G+ E A +L + M KG P++ TY++++RG GK D
Sbjct: 446 SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +ME P+ + YN ++ L A + + A + + +MVEKG
Sbjct: 506 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 553
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M +G PD++ ++ R GK + R+++ + SG PD TYN+L+ K
Sbjct: 130 ERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKS 189
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL +L M P V+ + T++ L +G L D + C PDV+ Y
Sbjct: 190 GEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITY 246
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + + +A L D M KG P+V TYN +I G C G+ DEA + M S
Sbjct: 247 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS 306
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + +N ++ ++ + G+ +A ++ M+ KG
Sbjct: 307 YGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKG 343
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 122/257 (47%), Gaps = 6/257 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T NI++ C+ G A +++ ++ P ++N +++ L R V
Sbjct: 315 THNIILRSMCSTGRWMDAERLLSDMLRK---GCSPSVVTFNILINFLCRKRLLGRAIDVL 371
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G P+ L+YN ++ + K+D+ L+ M G PD TYN LL L K
Sbjct: 372 EKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKD 431
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K AA+ +LN + G P ++ + T++DGL++ G + +EM KG PD++ Y
Sbjct: 432 GKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITY 491
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ ++ G++++A +F M P+ TYN+++ G C A + A + M
Sbjct: 492 STLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVE 551
Query: 249 RGCNPNFLVYNTLVSNL 265
+GC P Y L+ +
Sbjct: 552 KGCKPTEATYTILIEGI 568
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI L L + + L L M G P V+ T+L+ G R+G + + N
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G +PDV+ Y V+I Y +GE++KA ++ + M P+V TYN+++R C +GK E
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKE 226
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ R C P+ + Y L+ N + +A +++ M +KG
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 273
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 11/176 (6%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T N L+V+G P+ +N + S +H L+ R G L+ F + M
Sbjct: 81 TPNGDLNVIGMESSPIG----VNGSRSFEEFASNIHLRKLV----RNGELEEGLKFLERM 132
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G +PDV+ T +I + +G+ +KA + + + G +P+V TYN +I G+C +G+
Sbjct: 133 IYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEI 192
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D+A +++ M P+ + YNT++ +L ++GKL EA EV+ +++ Y +++
Sbjct: 193 DKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVIT 245
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 140/277 (50%), Gaps = 5/277 (1%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ LI C G + A KV + + P YNA++ + + +
Sbjct: 185 TYATLISGWCKIGRMEDAVKVFDEMLTKG--EVAPSAVMYNALIGGYCDVGKLDVALQYR 242
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G A + TYN++M A + + + +L+EM ++GFSPD TYNIL++ K
Sbjct: 243 EDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKE 302
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL + M + G + + +T+L+ SR G + F+ KG PDVV Y
Sbjct: 303 GNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMY 362
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I S+ G++E+A ++ M K P+ TYN+++RGFC+ G+ DEA T++ EM
Sbjct: 363 NALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTK 422
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG P+ + YNTL+S G + +A V M++KG
Sbjct: 423 RGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKG 459
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 129/268 (48%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T T+N+L+ A V+E K+ F P +YN +++
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKN---GFSPDVFTYNILINGYCK 301
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K V+++MS +G +TY ++ R G++ + RL + + G PD
Sbjct: 302 EGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVM 361
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ G A ++ M++ P + + TLM G G LD + DEM
Sbjct: 362 YNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMT 421
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD+V Y +I+ Y G+++ A + D M+ KG P + TYN++I+G C + D
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGD 481
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
+A +MKEM ++G P+ Y +L+ L
Sbjct: 482 DAENLMKEMVAKGITPDDSTYISLIEGL 509
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 6/171 (3%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+NI+L L KP+ AL LL M P+ + + T++ G G + A EM
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 177 ANKGCM-PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAG 234
+G + PD Y +I+ + G +E A +FD M+TKG++ P+ YN++I G+C G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K D A ++M RG YN L+ L + ++A+ V+ M + G
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNG 284
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 6/163 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++ G +N LI CT G++ A +++ K ++ P +YN ++ +
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRI---PPDDMTYNTLMRGFCLL 407
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + +M+ G PD+++YN ++ G + R+ DEM GF+P TY
Sbjct: 408 GRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTY 467
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
N L+ L K + A NL+ M G P + +L++GL+
Sbjct: 468 NALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLT 510
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ +M+ A G+ +A +L M PN TYN++I GFC G+ A +M+EM
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREMR 174
Query: 248 SR-GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
R G P+ Y TL+S G++ +A +V M+ KG+
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGE 214
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 143/285 (50%), Gaps = 10/285 (3%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P + ++ ILI G++ A K+ R + S P +YN ++H + Y
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDS---GITPSAVTYNVVIHGM--CLAYT 235
Query: 63 LIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L E + ++ M +G P T+NI++ A + GK+D+ RLL M G PD TY+
Sbjct: 236 LDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYST 295
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A +LL M + P+V+ TL+ GL +AG + + D M + G
Sbjct: 296 LISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSG 355
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y ++ + AG+ E+A++L M+ +G PNV TY +++ G C A + EAC
Sbjct: 356 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 415
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M+S GC PN Y L+ +AG++ ++ MV G
Sbjct: 416 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 460
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 146/283 (51%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G +A T+N++I + +E F + RP + ++N ++ A +
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M+D+G+ PD++TY+ ++ + ++D LL++M + P T N
Sbjct: 271 MDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 330
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H L K + A +L+ M G P V+ + TL+ G RAG + + +M +G
Sbjct: 331 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 390
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV YT +++ A L +A +F M + G PN+FTY ++I GFC AG+ D
Sbjct: 391 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 450
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ EM G +P+ +VY TL + L +G+ A A E++R E
Sbjct: 451 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G R+ N +I + + + F + + + P SY ++ L +
Sbjct: 145 GCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEA 204
Query: 65 EWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M D G P +TYN+V MC Y LD+ L M G P T+NIL
Sbjct: 205 YKLFRRMLDSGITPSAVTYNVVIHGMCLAY---TLDEALELFKSMRSKGCRPSRFTFNIL 261
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K K A LL M + G P V+ ++TL+ GL +D ++ ++M + C
Sbjct: 262 IDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV +I AG +++A+++ D M++ GQ P+V TYN+++ G C AG+ + A
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M +RG PN + Y LVS L A +L EA V M G
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 141/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E + ++ ILI G++ AR + ++ + S P +Y +++H L
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHS---GVTPSTVAYTSLIHGLCM 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M+ G P +TYN+++ A + G L++ L+ +M G PD T
Sbjct: 58 ANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K + AL L N M+ +G P+ T++ GL + +D F EM
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PD Y ++I AG+L +A LF M+ G P+ TYN +I G C+A D
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + K M S+GC P+ +N L+ GK+ EA +++ M + G +V+
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVT 292
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 140/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G P + T+N++I + G+ + + K P +YN ++ L +
Sbjct: 71 MNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGR 130
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G P+ ++N ++ + K+DQ ++ EM PD +Y I
Sbjct: 131 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGI 190
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A L M + G PS + + ++ G+ A LD F M +KG
Sbjct: 191 LIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG 250
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P + ++I ++ G++++A L M G +P+V TY+++I G C + D+A
Sbjct: 251 CRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDAR 310
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++M R C P + NTL+ L AG++ EA EV+ MV G+ +V+
Sbjct: 311 HLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 362
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 132/280 (47%), Gaps = 8/280 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI C G++ A ++++R P +Y+ ++ L I + +
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDD---GHVPDVVTYSTLISGLCSIARVDDARHLL 313
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M P ++T N ++ + G++ + +LD M SG SPD TYN L+H +
Sbjct: 314 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 373
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LL+ M G P+V+ +T L+ GL +A L F +M + GC P++ Y
Sbjct: 374 GQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTY 433
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I + +AG+++ LF M+ G P+ Y ++ C +G+ A +++E
Sbjct: 434 TALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRE 493
Query: 249 --RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
R VY V L +AGK+ A +R MV G+
Sbjct: 494 SLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQ 533
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 43/286 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G T++ LI C+ V AR ++E +K + +P + N ++H L
Sbjct: 281 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC---KPTVVTQNTLIHGLCK 337
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K V M G +PD++TYN ++ R G+ ++ LL +M G +P+ T
Sbjct: 338 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 397
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K ++ A + MK G P++ +T L+ G AG +D F EM
Sbjct: 398 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457
Query: 178 NKGCMPDVVCYTVM-------------------------------------ITSYIAAGE 200
G PD V Y + + + AG+
Sbjct: 458 CAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGK 517
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+E A M+ GQLP S++ G C +G+ EA +++E+
Sbjct: 518 MEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 563
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 143/278 (51%), Gaps = 11/278 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK-LIEWV 67
T+N+LI C GE+ A +V+ER + P +YN IL +L + K +E +
Sbjct: 179 TYNVLIGGYCKSGEIDKALQVLERM------SVAPDVVTYNTILRSLCDSGKLKEAMEVL 232
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+QM E Y PD++TY I++ A + Q +LLDEM + G PD TYN+L++ + K
Sbjct: 233 DRQMQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICK 291
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A+ LN+M G P+V+ ++ + G + +M KGC P VV
Sbjct: 292 EGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVT 351
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++I L +A D+ + M G +PN +YN ++ GFC K D A ++ M
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SRGC P+ + YNTL++ L GK A E++ + KG
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N+LI + G + ++ L+ +P ++N IL ++ +
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + M +G +P ++T+NI+ +C K LG+ +L++M + G P+ +
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAID---VLEKMPKHGCMPNSLS 386
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LLH + K A+ L M G P ++ + TL+ L + G DA ++++
Sbjct: 387 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLS 446
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC P ++ Y +I G+ E A +L + M KG P++ TY++++RG GK D
Sbjct: 447 SKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVD 506
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +ME P+ + YN ++ L A + + A + + +MVEKG
Sbjct: 507 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKG 554
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I+ Q + APD++TYN ++ + GKL + +LD + PD TY IL+
Sbjct: 193 IDKALQVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIE 252
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
A+ LL+ M++ G P V+ + L++G+ + G LD F + M GC P
Sbjct: 253 ATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQP 312
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+V+ + +++ S + G A+ L M+ KG P+V T+N +I C A ++
Sbjct: 313 NVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVL 372
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++M GC PN L YN L+ K+ A E + MV +G Y +V+
Sbjct: 373 EKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVT 421
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M +G PD++ ++ R GK + R+++ + SG PD TYN+L+ K
Sbjct: 131 ERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKS 190
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL +L M P V+ + T++ L +G L D + C PDV+ Y
Sbjct: 191 GEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITY 247
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + + +A L D M KG P+V TYN +I G C G+ DEA + M
Sbjct: 248 TILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPL 307
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + +N ++ ++ + G+ +A ++ M+ KG
Sbjct: 308 YGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKG 344
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 82/167 (49%), Gaps = 3/167 (1%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI L L + + L L M G P V+ T+L+ G R+G + + N
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G +PDV+ Y V+I Y +GE++KA + + M P+V TYN+++R C +GK E
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKE 227
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ R C P+ + Y L+ N + +A +++ M +KG
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG 274
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G L+ F + M +G +PDV+ T +I + +G+ KA + + + G +P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TYN +I G+C +G+ D+A +++ M P+ + YNT++ +L ++GKL EA EV+
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233
Query: 280 HMVEKGKYIHLVS 292
+++ Y +++
Sbjct: 234 RQMQRECYPDVIT 246
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 134/274 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F++L E+GL + E F + + F P S N +LH L +L+ + M
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G AP + TYN+++ + G L+ RL +M G SPD TYN L+ GK
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+L N MK+VG P ++ + L++ + + +F EM N G P+VV Y+ +
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I ++ G ++ A LF M G LPN FTY S+I C AG EA ++ +M G
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y L+ L AG++ EA EV R M++ G
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 136/277 (49%), Gaps = 6/277 (2%)
Query: 10 ARTFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
AR+ N L+ + G L RK I + + P +YN ++ L +
Sbjct: 254 ARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGI---APSVFTYNVMIDYLCKEGDLENSRR 310
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ QM + G +PD++TYN ++ ++G L++ L +EM G PD TYN L++
Sbjct: 311 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC 370
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +K A + MK G P+V+ ++TL+D + G + F +M G +P+
Sbjct: 371 KFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEF 430
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I + AG L +A L + M+ G N+ TY +++ G C AG+ EA + + M
Sbjct: 431 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 490
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
G +PN VY LV A ++ +A ++++ M E
Sbjct: 491 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + T+N++I C G++ +R++ F++ + P +YN+++
Sbjct: 280 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL---FVQMREMGLSPDVVTYNSLIDGYGK 336
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ +M D G PDI+TYN ++ + K+ + EM +G P+ T
Sbjct: 337 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 396
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A+ L M+ G P+ +T+L+D +AGNL ++M
Sbjct: 397 YSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 456
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G ++V YT ++ AG + +A+++F M+ G PN Y +++ G+ A + +
Sbjct: 457 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 516
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++K+M P+ ++Y +++ + KL E ++ M +G
Sbjct: 517 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 564
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 137/292 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI G+VG +V F + K P +YN +++ +
Sbjct: 315 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 374
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G P+++TY+ ++ A + G + +L +M R+G P+ TY
Sbjct: 375 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS 434
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K A LLN M + G +++ +T L+DGL +AG + + F M G
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ YT ++ YI A +E A + M P++ Y S+I G C K +E
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++EM+SRG + N ++ T++ AGK ++A + M + G +V+
Sbjct: 555 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT 606
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ L+ C G + A +V +K + P + Y A++H +
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI---SPNQQVYTALVHGYIK 511
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +QM++ PD++ Y ++ KL++ +L+EM G S +
Sbjct: 512 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 571
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ K K ALN M++VG + +++ + L+DGL +AG ++ +F M
Sbjct: 572 STTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRML 631
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P+V YT +I +E A+ LFD M +G P++ + ++I G G
Sbjct: 632 SLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 691
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ M + VY +LVS G+L +A + M+EKG
Sbjct: 692 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 35/211 (16%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T T+ +LI + G+ V+ F + +P Y +++ L
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ +M G PDI + ++ + G L + L+ M D H Y
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY-- 712
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
T+L+ G S+ G L + FF+EM KG
Sbjct: 713 ---------------------------------TSLVSGFSQCGELHQARKFFNEMIEKG 739
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+P+ V ++ Y G+L++A +L + M
Sbjct: 740 ILPEEVLCICLLREYYKRGQLDEAIELKNEM 770
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 142/278 (51%), Gaps = 11/278 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK-LIEWV 67
T+N+LI C GE+G A ++++R + P +YN IL L + K +E +
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRM------SVSPDVVTYNTILRTLCDSGKLKEAMEVL 235
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+QM E Y PD++TY I++ A + + Q +LLDEM G PD TYN+L++ + K
Sbjct: 236 DRQMQRECY-PDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A+ LNHM G P+V+ ++ + G + F EM KGC P VV
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++I G + +A D+ + M G PN +YN ++ C K + A + M
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SRGC P+ + YNTL++ L GK+ A E++ + KG
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N+LI + G + + + +P ++N IL ++ +
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E +M +G +P ++T+NI++ R G + + +L++M + G +P+ +YN
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH L K K A+ L+ M G P ++ + TL+ L + G +D +++ +KG
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKG 452
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I G+ + A L D M KG P++ TY++++ G GK DEA
Sbjct: 453 CSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAI 512
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++E G PN + YN+++ L A + A + + +MV +G
Sbjct: 513 AFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARG 557
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 131/276 (47%), Gaps = 6/276 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+ A +V+E S P +YN ++ G + I Q +
Sbjct: 155 LCKTGKTWKATRVMEILEDSGAV---PDVITYNVLIS---GYCKTGEIGSALQLLDRMSV 208
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD++TYN ++ GKL + +LD + PD TY IL+ K A+
Sbjct: 209 SPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMK 268
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL+ M++ G P V+ + L++G+ + G LD F + M + GC P+V+ + +++ S
Sbjct: 269 LLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMC 328
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+ G A+ MI KG P+V T+N +I C G A ++++M GC PN L
Sbjct: 329 STGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSL 388
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L+ L K+ A E + MV +G Y +V+
Sbjct: 389 SYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVT 424
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++M G P+ L+YN ++ A + K+++ LD M G PD TYN LL L
Sbjct: 374 VLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALC 433
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A+ +LN + G P ++ + T++DGLS+ G D DEM KG PD++
Sbjct: 434 KDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDII 493
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ ++ G++++A F + G PN TYNS++ G C A + A + M
Sbjct: 494 TYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYM 553
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+RGC P Y L+ L G EA E++ + +G
Sbjct: 554 VARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 109/217 (50%), Gaps = 3/217 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PDI+ ++ + GK + R+++ + SG PD TYN+L+ K
Sbjct: 134 EDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKT 193
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +AL LL+ M P V+ + T++ L +G L D + C PDV+ Y
Sbjct: 194 GEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITY 250
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + + +A L D M KG P+V TYN +I G C G+ DEA + M S
Sbjct: 251 TILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS 310
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + +N ++ ++ + G+ +A + + M+ KG
Sbjct: 311 YGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKG 347
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 111/253 (43%), Gaps = 41/253 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + TFNILI C G +G A V+E+ + P SYN +LHAL
Sbjct: 343 MIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQ---HGCTPNSLSYNPLLHALCK 399
Query: 58 IRQY-KLIEW----------------------------------VYQQMSDEGYAPDILT 82
++ + IE+ + Q+ +G +P ++T
Sbjct: 400 DKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLIT 459
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN V+ ++GK D +LLDEM G PD TY+ L+ L + K A+ + ++
Sbjct: 460 YNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E+G P+ + + ++M GL +A F M +GC P Y ++I G +
Sbjct: 520 EMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAK 579
Query: 203 KAQDLFDGMITKG 215
+A +L + + ++G
Sbjct: 580 EALELLNELCSRG 592
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G L+ F ++M +G +PD++ T +I G+ KA + + + G +P+
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TYN +I G+C G+ A ++ M +P+ + YNT++ L ++GKL EA EV+
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 280 HMVEKGKYIHLVS 292
+++ Y +++
Sbjct: 237 RQMQRECYPDVIT 249
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 145/292 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G T TF LI +VG + +E F RP +Y I++ L I +
Sbjct: 159 IIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGE 218
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M + G P+++TY+ ++ + + ++++ + M G SPD TYN
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNS 278
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A LLN M+ + P ++ F L+D + + G + + M G
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y+ ++ Y E+ +A+ LFD MITKG P+VF+YN +I G+C + DEA
Sbjct: 339 VEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAK 398
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM +G PN + YNTL+ L G L EA + ++M G +L +
Sbjct: 399 QLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFT 450
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 140/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T++ +I + + + ++ F K+ P +YN+++ L Q
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQ 288
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + +M PDI+T+N+++ + GK+ + +L M G PD TY+
Sbjct: 289 WKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSS 348
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + + A L + M G P V + L++G + +D K F+EM ++G
Sbjct: 349 LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG 408
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y +I G L +A++LF M T G LPN+FTY+ ++ GFC G F +A
Sbjct: 409 LTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAF 468
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M+S PN ++YN L+ + +G L +A ++ + KG
Sbjct: 469 RLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKG 513
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 1/240 (0%)
Query: 47 SYNAILHALLGIRQY-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+ +L A++ + QY + + +QM G +P+I T +I++ L ++D +L +
Sbjct: 99 QFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAK 158
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ + G P T+ L++ L K K A+ L + M G P V +TT+++GL + G
Sbjct: 159 IIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGE 218
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
A +M GC P+VV Y+ +I S+ + +A D+F M KG P++FTYNS
Sbjct: 219 TAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNS 278
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I+G C ++ EA ++ EM S P+ + +N LV + GK++EA V++ M E G
Sbjct: 279 LIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMG 338
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN+L IC G+V A+ V++ + P +Y+++++ + ++
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTE---MGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M +G PD+ +YNI++ ++ ++D+ +L +EM G +P+ +YN L+H L +
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A NL +M G P++ ++ L+DG + G F M + P++V Y
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I + +G L A+ LF + KG PN Y ++I G C G DEA + ME
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + YN ++ + + A ++I M +KG
Sbjct: 547 DGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKG 583
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 119/247 (48%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
N P ++N ++ + + + V + M++ G PD++TY+ +M ++ +
Sbjct: 302 LNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+L D M G PD +YNIL++ K + A L N M G P+ + + TL+
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL + G+L + F M G +P++ Y++++ + G KA LF M + P
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N+ YN +I C +G +A + E+ +G PN +Y T+++ L G L EA E
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541
Query: 279 RHMVEKG 285
R+M E G
Sbjct: 542 RNMEEDG 548
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 100/225 (44%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++NILI C + A+++ I L P SYN ++H L
Sbjct: 369 MITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGL---TPNNVSYNTLIHGLCQ 425
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M G P++ TY+I++ + G + RL M + P+
Sbjct: 426 LGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVM 485
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ + K A L + + G P+ +TT+++GL + G LD F M
Sbjct: 486 YNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNME 545
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GC PD + Y V+I ++ + +A L M KG + +V T
Sbjct: 546 EDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 151/300 (50%), Gaps = 15/300 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARK-VVERFIKSKLFNFRPFKNSYNAILHALL 56
M+ T+N L+ C G V AR +V++ F P +Y+ ++ L
Sbjct: 181 MVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK-------GFSPNVITYSTLISGLC 233
Query: 57 -GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+R+ + + ++M G PDI++YN ++ R + + +L + R G+ P+
Sbjct: 234 RELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEV 293
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYNIL+ L K D+ A L + + + G +P + +T +DGL +AG ++ +
Sbjct: 294 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 353
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M KGC+PDVV + +I +++A+ L GM KG PN ++N++I G C AGK
Sbjct: 354 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 413
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNL---RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +A T KEM RG P + YN LV L R G++ EA + M+EKG+ +V+
Sbjct: 414 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 473
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/296 (32%), Positives = 150/296 (50%), Gaps = 19/296 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARK--VVERFIKSKLFN------FRPFKNSYNAIL 52
M+ NG ++N LI GLAR+ V E KLF + P +YN ++
Sbjct: 249 MVLNGCKPDIVSYNALIH-----GLAREQGVSEAL---KLFGSVLRQGYEPEVPTYNILI 300
Query: 53 HALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
LL + ++ + G PD +TY + + + G+++ +L +M G
Sbjct: 301 DGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV 360
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
PD ++N +++ L K + A LL+ M+ G P+ + F TL+ G RAG
Sbjct: 361 PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTT 420
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAA---GELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
F EM +G P VV Y +++ A G +++A LFD MI KG++P+V TY+++I G
Sbjct: 421 FKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDG 480
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AGK D+A ++ ME++GC PN YN+L+S L K+ EA E+ MVEKG
Sbjct: 481 LGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKG 536
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 150/321 (46%), Gaps = 39/321 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G+ T+N L+ C G++ A K+ + +K F P +YNA+++
Sbjct: 111 MIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKR---GFVPDVVTYNALINGFCK 167
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYR---------------------- 92
+ + + Q+M E PD++TYN + +C R
Sbjct: 168 ADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYST 227
Query: 93 --------LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
L +L+ +LL++M +G PD +YN L+H L + AL L +
Sbjct: 228 LISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G++P V + L+DGL + ++ F + G PD + YTV I AG +E A
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ M KG +P+V ++N++I G C + DEA ++ ME++GC+PN + +NTL+
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
AGK +A + M+++G
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRG 428
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G+ T+NILI + + E F P +Y + L +
Sbjct: 284 VLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 343
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M ++G PD++++N V+ + ++D+ LL M G SP+ ++N
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 403
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA---GNLDACKYFFDEMA 177
L+ + K A+ M + G P+V+ + L+DGL +A G + FD M
Sbjct: 404 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG +PDVV Y+ +I AG+L+ A+ L M KG +PNV+TYNS+I G C K D
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
EA + M +GC P+ + Y T++S L
Sbjct: 524 EALELFVAMVEKGCVPDTITYGTIISAL 551
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 125/230 (54%), Gaps = 10/230 (4%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y+PD T I++ + + GK+++ HR ++++ G D T+NI + L + + A
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQ 70
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+ + M++ GF P+ + + L+ GL G + + ++ M G PDVV Y ++ +
Sbjct: 71 TVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 130
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G+L++A +FDG + +G +P+V TYN++I GFC A K DEA +++ M S P+
Sbjct: 131 CKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDV 190
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ YN+LV+ L G++ EA +I V+KG Y L+S R R
Sbjct: 191 VTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELR 237
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 139/285 (48%), Gaps = 9/285 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++++G A T+ + I C G V A +++ + P S+NA+++ L
Sbjct: 319 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCV---PDVVSHNAVINGLCK 375
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E + M +G +P+ +++N ++C + R GK + EM + G P T
Sbjct: 376 EKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVT 435
Query: 118 YNILLHVLGKGDKP---LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
YNIL+ L K + A+ L + M E G P V+ ++ L+DGL +AG LD +
Sbjct: 436 YNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLG 495
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M KGC+P+V Y +I+ ++++A +LF M+ KG +P+ TY ++I C
Sbjct: 496 AMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQE 555
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
D+A + G P +Y +L+ L ++ EA ++++
Sbjct: 556 MVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 141/284 (49%), Gaps = 11/284 (3%)
Query: 6 FPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
+ A T IL+ + G++ A + VE+ + L + +++N + L +
Sbjct: 12 YSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDI----STFNIYISGLCRASRIG 67
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V+ M G+ P+ +TYN ++ G++ L + M ++G+SPD TYN LL
Sbjct: 68 DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLL 127
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H K K AL + + + GF P V+ + L++G +A LD + M ++ +
Sbjct: 128 HGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLV 187
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA-GKFDEACT 241
PDVV Y ++ G +++A+ L ++ KG PNV TY+++I G C + + A
Sbjct: 188 PDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQ 244
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++M GC P+ + YN L+ L ++EA ++ ++ +G
Sbjct: 245 LLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQG 288
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 138/271 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++NG T+ LI G+ + + + F + L Y A++ LL +
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
VY+ M+ +G PD++T + ++ + G++ R+ M G +P+ Y+
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H L K K AL +L MK+ P + + L+DGL ++G+++A + FFDEM G
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDV Y ++++ + AG + A +FD M + PNV TY ++I G C + +A
Sbjct: 406 CKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKAS 465
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ M+ RGC P+ VY++LV L +GKL
Sbjct: 466 LYFQHMKERGCPPDSFVYSSLVDGLCKSGKL 496
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 138/289 (47%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL----L 56
+ NG T T+N L+ ++G + ++ K P +Y +++ L
Sbjct: 191 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 250
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
YKL +++M+ G D + Y ++ + GK+ Q + M G PD
Sbjct: 251 SFEAYKL----FKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVV 306
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T + ++ L K + AA+ + M+ G P+ + ++ L+ GL +A +D +M
Sbjct: 307 TLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
C PD + Y ++I +G++E A+ FD M+ G P+V+TYN ++ GFC AG
Sbjct: 367 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNT 426
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D AC + +M S C+PN + Y TL+S L +L +A +HM E+G
Sbjct: 427 DAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERG 475
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 145/288 (50%), Gaps = 9/288 (3%)
Query: 1 MIENGFPTT----ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
+++N TT T+N+LI C E A V+ + + P ++N +LH
Sbjct: 81 LLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEED--YGVAPSLKTHNLVLH 138
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L + ++ + G DI TY ++ + K+ L++++ +G +P
Sbjct: 139 GLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTP 198
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN LL+ L K + A++LL + + G P V+ +T+L+DGL + F
Sbjct: 199 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 258
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EMA +G + D VCYT +I + AG++ +A ++ M ++G +P+V T ++MI G C A
Sbjct: 259 KEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 318
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G+ A + K ME+RG PN +VY+ L+ L A K+ A E++ M
Sbjct: 319 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 366
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y AI+ L ++ + + ++++ G P I TYN ++ ++G+L++ LL +
Sbjct: 166 HTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 225
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ +G +PD TY L+ LGK + A L M G + +T L+ GL +AG
Sbjct: 226 IVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGK 285
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ + M ++GC+PDVV + MI AG + A +F M +G PN Y++
Sbjct: 286 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 345
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G C A K D A M+ +M+ C P+ + YN L+ L +G + A M+E G
Sbjct: 346 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 405
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 5/255 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G +G A ++ F + P + Y+A++H L R+ + QM
Sbjct: 315 LCKAGRIGAAVRI---FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 371
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD +TYNI++ + G ++ DEM +G PD +TYNIL+ K AA
Sbjct: 372 TPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACG 431
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ + M P+V+ + TL+ GL + L +F M +GC PD Y+ ++
Sbjct: 432 VFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLC 491
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G+LE LFD M G + N T +I C A + DEA ++ + G P+
Sbjct: 492 KSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPY 549
Query: 257 VYNTLVSNLRNAGKL 271
YN+++S L + K+
Sbjct: 550 AYNSIISTLIKSAKV 564
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 116/248 (46%), Gaps = 3/248 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDE--GYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
S +A++ ++ L ++Q +S G+ + T N ++ R + + LL
Sbjct: 24 STDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLK 83
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE-VGFDPSVLHFTTLMDGLSRA 163
+ F PD T+N+L+ +P A ++ M+E G PS+ ++ GL ++
Sbjct: 84 NELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKS 143
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + A F+ GC D+ YT ++ +++ A L + + G P + TY
Sbjct: 144 GKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATY 203
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N+++ G C G+ +EA +++++ GC P+ + Y +L+ L + EA+++ + M
Sbjct: 204 NALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMAL 263
Query: 284 KGKYIHLV 291
+G + V
Sbjct: 264 RGLVLDTV 271
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 148/288 (51%), Gaps = 3/288 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI + G + V K + + +P YN I+++L +
Sbjct: 154 VVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL 213
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
VY +M +G +PD++TY ++ +GK+ + LL+EM +PD +T+++
Sbjct: 214 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSV 273
Query: 121 LLHVLGK-GDKPLA--ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ LGK G K + A++L MK P ++ + +L+DGL + +L+ EM
Sbjct: 274 LIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMK 333
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDV YT+++ G LE A++ F ++ KG NV+ YN MI G C AG F
Sbjct: 334 EHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFG 393
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +ME +GC PN + + T++ L + +A +++R M+ +G
Sbjct: 394 EAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARG 441
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 9/293 (3%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T +ILI C + LA V +K F P + N ++ L +
Sbjct: 87 NGITPDLCTLSILINCFCHQAHITLAFSVFANILKR---GFHPDAITLNTLIKGLCFRGE 143
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + Q+ +G+ D ++Y ++ + G+ RLL ++ PD YN
Sbjct: 144 IKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNT 203
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K A ++ + M G P V+ +TTL+ G G + +EM K
Sbjct: 204 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN 263
Query: 181 CMPDVVCYTVMITSYIAAGE---LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDV ++V+I + G+ +++A LF+ M K +P++ TYNS+I G C +
Sbjct: 264 INPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLE 323
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
A ++KEM+ G P+ Y L+ L G+L A E +H++ KG ++++
Sbjct: 324 RAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNV 376
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P +N ++ + + + L + +G +PD T +IL++ A ++
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
++ + GF P + TL+ GL G + YF D++ +G D V Y +I
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
AGE + L + P+V YN++I C +AC + EM +G +P+ +
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHM 281
Y TL+ GK+ EA ++ M
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEM 259
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 3/220 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G T+ LI +G ++ + KL N P +++ ++ AL +
Sbjct: 224 MIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGK 283
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K+++ ++++M + PDI+TYN ++ + L++ LL EM G PD ++
Sbjct: 284 KKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYS 343
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L KG + A H+ G +V + +++GL +AG +M
Sbjct: 344 YTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKME 403
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
KGCMP+ + + +I + E +KA+ + MI +G L
Sbjct: 404 GKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGLL 443
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 78/173 (45%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P +N +L L K + ++L + G P + + L++ ++
Sbjct: 56 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F + +G PD + +I GE++K D ++ +G + +Y ++I G C
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG+ +++++E P+ ++YNT++++L L +A +V M+ KG
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 228
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 143/292 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E GF A ++N LI + G ++ +E + + +P +++A++ A R
Sbjct: 185 MREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRN 244
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + ++M G P+I TY I + R GK+D+ +R++ M G PD TY +
Sbjct: 245 IKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTV 304
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A+ L MK P + + TL+D S G+LD + + EM G
Sbjct: 305 LIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADG 364
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV +T+++ + AG + +A DL D M +G LPN+ TYN++I G A + D+A
Sbjct: 365 YAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDAL 424
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ MES G P Y L+ +G +A E M +G ++V+
Sbjct: 425 DLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVA 476
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 153/289 (52%), Gaps = 12/289 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVER---FIKSKLFNFRPFKNSYNAILHA 54
M ++G T+ +LI CT ARK+ + F K K + +P K +Y +L
Sbjct: 290 MDDDGCGPDVVTYTVLIDALCT------ARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDK 343
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+E ++ +M +GYAPD++T+ I++ A + G++++ LLD M + G P+
Sbjct: 344 FSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPN 403
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
HTYN L+ L + ++ AL+L ++M+ +G +P+ + L+D ++G+ F+
Sbjct: 404 LHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFE 463
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M +G P++V + S G L +A+ +F+ + + G P+ TYN M++ + G
Sbjct: 464 KMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVG 523
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ DEA ++ EM C P+ +V N+L+ L AG++ EA ++ M E
Sbjct: 524 QVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 140/270 (51%), Gaps = 2/270 (0%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C + +AR V +F K +P YN ++ L + ++ ++++M G
Sbjct: 763 VLCKHKKTSVARNVFVKFTKE--LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG 820
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
APD TYN ++ A + GK+++ L DEM G P+ TYN+++ L K ++ A+
Sbjct: 821 CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAM 880
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+L ++ F P+ F L+DGL ++G LD FD M + GC P+ Y +++ Y
Sbjct: 881 DLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGY 940
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G ++ A + F M+ +G P++ +Y ++ C+AG+ D+A ++++ G +P+
Sbjct: 941 GKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDL 1000
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN +++ L + + EA + M +G
Sbjct: 1001 VAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 124/254 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N++I + K ++ + +F P ++ ++ LL +
Sbjct: 851 MLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGR 910
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M G P+ YNI++ +LG +D M + G PD +Y I
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTI 970
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +L + AL+ +K+ G DP ++ + +++GL R+ + F EM N+G
Sbjct: 971 LVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRG 1030
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD+ Y +I + G +E+A +++ + G PNVFTYN++IRG+ ++G + A
Sbjct: 1031 IVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAY 1090
Query: 241 TMMKEMESRGCNPN 254
+ K+M GC+PN
Sbjct: 1091 GIYKKMMVGGCDPN 1104
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 133/273 (48%), Gaps = 1/273 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA T+ +LI G+ G K +E F K K P + NA L++L + +
Sbjct: 434 GVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEA 493
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ ++ G APD +TYN++M ++G++D+ +LL EM + PD N L+
Sbjct: 494 KAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDT 553
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + A + M+E+ P+V+ + L+ GL + G + F+ M GC P+
Sbjct: 554 LYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPN 613
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + ++ E++ A +F M T P+V T+N++I GF + A +
Sbjct: 614 TITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFH 673
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+M+ + P+ + TL+ + +G++ +A +
Sbjct: 674 QMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRI 705
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI G+ G ++ + + + +P +YN ++ L+ + +Y +
Sbjct: 827 TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++P T+ ++ + G+LD H + D M G P+ YNIL++ GK
Sbjct: 887 VSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV 946
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A M + G P + +T L+D L AG +D ++F+++ G PD+V Y +M
Sbjct: 947 DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + E+A LF M +G +P+++TYNS+I + G +EA + +E++ G
Sbjct: 1007 INGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGL 1066
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YN L+ +G A+ + + M+ G
Sbjct: 1067 KPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGG 1100
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 110/237 (46%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L L R+ + + +V+ M + ++ TY I+ + + G L Q L++M
Sbjct: 128 NHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMRE 187
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+GF + ++YN L+H L + AL + M G PS+ F+ LM + N+
Sbjct: 188 AGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKT 247
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+EM + G P++ YT+ I G++++A + M G P+V TY +I
Sbjct: 248 VMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLID 307
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C A K D+A + +M+S P+ + Y TL+ + G L + ++ M G
Sbjct: 308 ALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADG 364
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 136/319 (42%), Gaps = 38/319 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E T T+NIL+ G+ G +K V+ F P ++N +L L +
Sbjct: 570 MEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDE 629
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L ++ +M+ PD+LT+N ++ + ++ L +M + PD T
Sbjct: 630 VDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCT 688
Query: 121 LLHVLGKGDKPLAALNLL-NHMKEVGFDPSVLHFTTLMDG-LSRAGNLDA---------- 168
LL + K + A + + +VG + + +M G L+ AG A
Sbjct: 689 LLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCR 748
Query: 169 ----------------CKYFFDEMANK---------GCMPDVVCYTVMITSYIAAGELEK 203
CK+ +A G P + Y ++I ++ +E
Sbjct: 749 AICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEV 808
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A +LF+ M + G P+ FTYNS+I +GK +E + EM +RGC PN + YN ++S
Sbjct: 809 AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVIS 868
Query: 264 NLRNAGKLAEAHEVIRHMV 282
NL + +L +A ++ ++V
Sbjct: 869 NLVKSNRLDKAMDLYYNLV 887
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 101/226 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ F T TF LI + G E F + RP YN +++ +
Sbjct: 886 LVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGH 945
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++M EG PD+ +Y I++ G++D +++ ++G PD YN+
Sbjct: 946 VDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNL 1005
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ LG+ + AL+L + M+ G P + + +L+ L G ++ ++E+ G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
P+V Y +I Y +G E A ++ M+ G PN T+ +
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+G + T+N+++ +VG + ++ + P N+++ L + +
Sbjct: 503 SGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEE 562
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ +M + AP ++TYNI++ + G++ + +L + M G SP+ T+N LL
Sbjct: 563 AWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLD 622
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K D+ AL + M + P VL F T++ G + + + F +M K P
Sbjct: 623 CLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRP 681
Query: 184 DVVCYTVMITSYIAAGELEKA 204
D V ++ I +G++E A
Sbjct: 682 DHVTLCTLLPGVIKSGQIEDA 702
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 143/272 (52%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +LI G E F+K K + +P + +Y +L I+ + +M
Sbjct: 299 TYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEM 358
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+GY PD++T+ I++ A ++GK+D+ LD M + G +P+ HTYN L+ L + ++
Sbjct: 359 EADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRL 418
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L N M+ +G + + + +D ++G F++M G +P++V
Sbjct: 419 DEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNAS 478
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ S G LE+A++ F+G+ G P+ TYN ++R + AG+ D+A ++ EME GC
Sbjct: 479 LYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGC 538
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+P ++ N+L+ L A ++ EA ++ + M E
Sbjct: 539 DPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 144/269 (53%), Gaps = 2/269 (0%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+ A V + KS F P +YN+++ LL R ++ ++ +M + G
Sbjct: 762 LCKHGKAVDAYNVFLKLTKS--FCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGC 819
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD+ TYN+ + A + GK+ + L +EM G P+ T+NI++ L K + A++
Sbjct: 820 TPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAID 879
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + F P+ + L+DGL + G L+ K FF+EM + GCMP+ Y +++ +
Sbjct: 880 LYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFG 939
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G++E A +LF M+ +G P++ +Y+ M+ CM GK D+A +E++ G +P+ +
Sbjct: 940 KQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLV 999
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN +++ L + ++ EA + M +G
Sbjct: 1000 CYNLMINGLGRSQRVEEALSLFDEMRNRG 1028
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF ++ LI + G R+ ++ + + +P +Y+A++ AL R + +
Sbjct: 187 GFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETV 246
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ Q+M G P+I T+ I + R GK+D+ + +L M +G PD TY +L+
Sbjct: 247 MGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDA 306
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K A L MK P + + TL+D S G+LDA K F+ EM G +PD
Sbjct: 307 LCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPD 366
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV +T++I + G++++A D M +G PN+ TYN++I G + DEA +
Sbjct: 367 VVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFN 426
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
MES G Y + +G+ +A + M G ++V+
Sbjct: 427 SMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVA 474
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 140/275 (50%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KLIEWVYQQ 70
T+N+ + G+ G +++ + + + +P ++N ++ L+ K I+ Y
Sbjct: 825 TYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL 884
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
MS + ++P TY ++ +LG+L++ + +EM G P+ YNIL++ GK
Sbjct: 885 MSGD-FSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD 943
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M + G P + ++ ++D L G +D ++F+E+ G PD+VCY +
Sbjct: 944 VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI + +E+A LFD M +G P+++TYN++I +AG +EA M +E++ +G
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YN L+ +G A+ V + M+ G
Sbjct: 1064 LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGG 1098
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 128/254 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T NI+I + K ++ + +F P +Y ++ LL + +
Sbjct: 849 MLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGR 908
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +++M D G P+ YNI+M + G ++ L M + G PD +Y+I
Sbjct: 909 LEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSI 968
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K AL+ +K G DP ++ + +++GL R+ ++ FDEM N+G
Sbjct: 969 MVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG 1028
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ Y +I + AG +E+A +++ + KG PNVFTYN++IRG M+G D A
Sbjct: 1029 ITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAY 1088
Query: 241 TMMKEMESRGCNPN 254
+ K+M GC PN
Sbjct: 1089 AVYKKMMVGGCRPN 1102
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 129/288 (44%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF-------IKSKLFNFRPFKNSYNAILH 53
M + G T+N LIC + + +E F +++ + + F + Y
Sbjct: 393 MKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGE 452
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ I+ +++M G P+I+ N + + G+L++ + + + G +P
Sbjct: 453 SGKAIK-------TFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAP 505
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TYNIL+ GK + A+ LL+ M+E G DP V+ +L+D L +A +D F
Sbjct: 506 DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMF 565
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M P VV Y ++ G +++A LF GMI PN ++N+++ C
Sbjct: 566 QRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKN 625
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G+ D A M+ M C P+ L YNT++ L ++ A + M
Sbjct: 626 GEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 132/278 (47%), Gaps = 1/278 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TTA T+ + I G+ G + K ++ F K K P + NA L++L + +
Sbjct: 432 GLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEA 491
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ + + G APD +TYNI+M + G++D +LL EM +G P+ N L+
Sbjct: 492 KEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDT 551
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K D+ A + MKE+ P+V+ + TL+ GL + G + F M C P+
Sbjct: 552 LYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPN 611
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + ++ GE++ A + M P+V TYN++I G + + A +
Sbjct: 612 TISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFH 671
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+M+ + P+++ TL+ + G++ +A V + V
Sbjct: 672 QMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFV 708
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 101/212 (47%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M +G AP++ TYN ++C RL +LD+ L + M G +TY + + GK +
Sbjct: 393 MKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGE 452
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+ MK G P+++ + L+ G L+ K FF+ + G PD + Y +
Sbjct: 453 SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNI 512
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ Y AG ++ A L M G P V NS+I A + DEA M + M+
Sbjct: 513 LMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMK 572
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
P + YNTL++ L G++ EA + + M+
Sbjct: 573 LAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G+ TF ILI +VG + K P ++YN ++ LL + +
Sbjct: 358 MEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNR 417
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M G TY + + + G+ + + ++M +G P+ N
Sbjct: 418 LDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNA 477
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A N +K+ G P + + LM +AG +D EM G
Sbjct: 478 SLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENG 537
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+VV +I + A +++A +F M P V TYN+++ G G+ EA
Sbjct: 538 CDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEAT 597
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ K M + C PN + +NTL+ L G++ A +++ M E
Sbjct: 598 ALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTE 640
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L L R+ + + V+ M + I TY + Y G L + L++M +
Sbjct: 126 NYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPVALEKMRK 185
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
GF + ++Y L+H+L K AL + M G PS+ ++ LM L + +++
Sbjct: 186 VGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIET 245
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
EM + G P++ +T+ I AG++++A + M G P+V TY +I
Sbjct: 246 VMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLID 305
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
C AGK + A + +M++ P+ + Y TL+ + G L E M G
Sbjct: 306 ALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLP 365
Query: 289 HLVS 292
+V+
Sbjct: 366 DVVT 369
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 107/226 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ F T T+ LI ++G + + F + + P YN +++
Sbjct: 884 LMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGD 943
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++++M EG PD+ +Y+I++ +GK+D +E+ SG PD YN+
Sbjct: 944 VETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNL 1003
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ LG+ + AL+L + M+ G P + + L+ L AG ++ ++E+ KG
Sbjct: 1004 MINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKG 1063
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
P+V Y +I + +G ++A ++ M+ G PN T+ +
Sbjct: 1064 LEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
>gi|302767746|ref|XP_002967293.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
gi|300165284|gb|EFJ31892.1| hypothetical protein SELMODRAFT_87828 [Selaginella moellendorffii]
Length = 321
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 142/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T TF IL+ C + A ++VE + F P +N I+ AL
Sbjct: 1 MAEKGCIPTVVTFGILVDGLCKANRLTDAFELVEVMGERGCF---PNALVFNGIMDALCK 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G +P I+TYN+++ + KL + +L EM G P+ T
Sbjct: 58 EGRSAEAYGFIETMRSMGVSPTIVTYNLLIDGFCKEEKLHRALEILQEMTGRGHEPNHVT 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LH L K K AL L M E V +TTL+DGL +AG L DEM
Sbjct: 118 YNTFLHGLCKYGKVDDALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEME 177
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N GC+P CY +++ + +A LF M G LP+ T+ M+ G+C + D
Sbjct: 178 NSGCVPKPGCYNAILSWLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRID 237
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++++M+S G P ++YNTL+ L AG+++EA+ +++ M+ +G
Sbjct: 238 DALLLLQQMKSAGLAPREVIYNTLIDALNRAGRVSEAYRLLQEMISRG 285
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 96/223 (43%), Gaps = 2/223 (0%)
Query: 5 GFPTTARTFNILICT-CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
G T T+N+LI C E L R +E + P +YN LH L +
Sbjct: 75 GVSPTIVTYNLLIDGFCKEEKLHR-ALEILQEMTGRGHEPNHVTYNTFLHGLCKYGKVDD 133
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+++ M+++ D+ Y ++ + GKL + + LLDEM SG P YN +L
Sbjct: 134 ALALFRAMTEKKIRLDVYGYTTLIDGLCQAGKLAEAYSLLDEMENSGCVPKPGCYNAILS 193
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L KG + A L M G P L F ++ G R +D +M + G P
Sbjct: 194 WLCKGSRINEAHKLFKRMTGSGILPDWLTFGMMVFGYCRGHRIDDALLLLQQMKSAGLAP 253
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
V Y +I + AG + +A L MI++G PN TY M
Sbjct: 254 REVIYNTLIDALNRAGRVSEAYRLLQEMISRGLSPNSRTYALM 296
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 132/263 (50%), Gaps = 5/263 (1%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
VG A + ++ F + F +P YN +L ALL ++++I +Y M +G P++ T
Sbjct: 122 VGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFT 181
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YNI++ A + ++D H+L EM G PD TY ++ L K K A L
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-- 239
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F PSV + L+DG+ + G ++ EM + G P+VV Y+ +I S +G +E
Sbjct: 240 ---FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A LF M +G N+ T+ +I+G M GK EA + K M GC PN + YNTL+
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L + G L EA +V M G
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSG 379
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 144/288 (50%), Gaps = 11/288 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P A T+ ++ C G++ AR++ RF +P YNA++ +
Sbjct: 205 MSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF--------KPSVPVYNALIDGMCK 256
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + +M D G P++++Y+ ++ + G ++ L +M G + HT
Sbjct: 257 EGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K AL+L M + G +P+V+ + TL+ GL G+L+ D+M
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQ 376
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC+P+V Y+++I + +G+L A + ++ MI+ G PNV TY M+ C FD
Sbjct: 377 RSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFD 436
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++++M GC PN + +NT + L G++ A +++ M G
Sbjct: 437 QANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M++NG +++ +I C G V LA ++ R + + F P I
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL------IKG 323
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ + Y+ ++ +++ M +G P+++ YN ++ G L++ ++ D+M RSG P
Sbjct: 324 CFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+IL+ K + A N M G P+V+ +T ++D L + D
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M +GC P+ + + I G +E A L + M G LPN+ TYN ++
Sbjct: 443 EKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K++EA + +E+E+R PN + YNT++ AG + EA ++ + +G
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRG 554
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 6/290 (2%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
F + +N LI C G + +A K++ + + + P SY+ I+++L +
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV---DPNVVSYSCIINSLCVSGNVE 296
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L ++ QM G +I T+ ++ + GKL + L M + G P+ YN L+
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H L AL + + M+ G P+V ++ L+DG +++G+L ++ M + GC
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCR 416
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+VV YT M+ ++A L + M +G PN T+N+ I+G C G+ + A +
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKL 476
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ M+ GC PN YN L+ L K EA + + + + +LV+
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 18/272 (6%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR----------QYKLIEWVYQQMSDE 74
L R +R + S L F NS NA H R + +++++ QQM +
Sbjct: 45 LKRLKTDRNLSSVLGFFSAIANS-NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G + ++ R+G +Q ++ +G G P YN LL L +K
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMI 163
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L +MK+ G P+V + L+ L + +DA F EM+NKGC PD V YT M++S
Sbjct: 164 NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Query: 195 YIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
AG+++ A++L G+ P+V YN++I G C G+ + A ++ EM G +P
Sbjct: 224 LCKAGKIDDAREL------AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y+ ++++L +G + A + M +G
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P +YN ++H L + V QM G P++ TY+I++ + G L
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ M G P+ TY ++ VL K A +L+ M G P+ + F T + GL
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLC 465
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G ++ + M GC+P++ Y ++ + + E+A LF + + PN+
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN+++ GF AG EA + + RG P+ + YNT++ GK+ A +++ +
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T++ILI + G E + + RP +Y ++ L
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M+ EG P+ +T+N + G+++ +LL+ M G P+ TYN
Sbjct: 435 FDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L + +K A L ++ P+++ + T++ G SRAG + F + +G
Sbjct: 495 LLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRG 554
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT-KGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD + Y MI +Y G+++ A L + + + K P++ TY S+I G C +EA
Sbjct: 555 TAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEA 614
Query: 240 CTMMKEMESRGCNPNFLVYNTLV 262
+ + ++G PNF +N LV
Sbjct: 615 MAFLDKAINQGICPNFATWNALV 637
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 131/289 (45%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G +N LI C+ G + A +V ++ +S P +Y+ ++
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL---PNVTTYSILIDGFAK 396
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M G P+++TY ++ + DQ + L+++M G +P+ T
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTIT 456
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N + L + A+ LL M+ G P++ + L+D L R + F E+
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P++V Y ++ + AG + +A LF + +G P+ TYN+MI +C GK
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576
Query: 238 EACTMMKEMES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++ + S + +P+ + Y +L+ N + EA + + +G
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 147 bits (371), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 132/263 (50%), Gaps = 5/263 (1%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
VG A + ++ F + F +P YN +L ALL ++++I +Y M +G P++ T
Sbjct: 122 VGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFT 181
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YNI++ A + ++D H+L EM G PD TY ++ L K K A L
Sbjct: 182 YNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGR-- 239
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F PSV + L+DG+ + G ++ EM + G P+VV Y+ +I S +G +E
Sbjct: 240 ---FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A LF M +G N+ T+ +I+G M GK EA + K M GC PN + YNTL+
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L + G L EA +V M G
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSG 379
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 144/288 (50%), Gaps = 11/288 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P A T+ ++ C G++ AR++ RF +P YNA++ +
Sbjct: 205 MSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF--------KPSVPVYNALIDGMCK 256
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + +M D G P++++Y+ ++ + G ++ L +M G + HT
Sbjct: 257 EGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K AL+L M + G +P+V+ + TL+ GL G+L+ D+M
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQ 376
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC+P+V Y+++I + +G+L A + ++ MI+ G PNV TY M+ C FD
Sbjct: 377 RSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFD 436
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++++M GC PN + +NT + L G++ A +++ M G
Sbjct: 437 QANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHG 484
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 6/290 (2%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
F + +N LI C G + +A K++ + + + P SY+ I+++L +
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGV---DPNVVSYSCIINSLCVSGNVE 296
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L ++ QM G +I T+ ++ + GKL + L M + G P+ YN L+
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H L AL + + M+ G P+V ++ L+DG +++G+L ++ M + GC
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCR 416
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+VV YT M+ ++A L + M +G PN T+N+ I+G C G+ + A +
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKL 476
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ M+ GC PN YN L+ L K EA + + + + +LV+
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M++NG +++ +I C G V LA ++ R + + F P I
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPL------IKG 323
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ + Y+ ++ +++ M +G P+++ YN ++ G L++ ++ D+M RSG P
Sbjct: 324 CFMRGKLYEALD-LWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+IL+ K + A N M G P+V+ +T ++D L + D
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M +GC P+ + + I G +E A L + M G LPN+ TYN ++
Sbjct: 443 EKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K++EA + +E+E+R PN + YNT++ AG + EA ++ + +G
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRG 554
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 18/272 (6%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR----------QYKLIEWVYQQMSDE 74
L R +R + S L F NS NA H R + +++++ QQM +
Sbjct: 45 LKRLKTDRNLSSVLGFFSAIANS-NAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G + ++ R+G +Q ++ +G G P YN LL L +K
Sbjct: 104 GINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMI 163
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L +MK+ G P+V + L+ L + +DA F EM+NKGC PD V YT M++S
Sbjct: 164 NPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSS 223
Query: 195 YIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
AG+++ A++L G+ P+V YN++I G C G+ + A ++ EM G +P
Sbjct: 224 LCKAGKIDDAREL------AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDP 277
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y+ ++++L +G + A + M +G
Sbjct: 278 NVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 109/240 (45%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P +YN ++H L + V QM G P++ TY+I++ + G L
Sbjct: 346 EPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASE 405
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ M G P+ TY ++ VL K A +L+ M G P+ + F T + GL
Sbjct: 406 TWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLC 465
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G ++ + M GC+P++ Y ++ + + E+A LF + + PN+
Sbjct: 466 GNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLV 525
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN+++ GF AG EA + + RG P+ + YNT++ GK+ A +++ +
Sbjct: 526 TYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERV 585
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T++ILI + G E + + RP +Y ++ L
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M+ EG P+ +T+N + G+++ +LL+ M G P+ TYN
Sbjct: 435 FDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L + +K A L ++ P+++ + T++ G SRAG + F + +G
Sbjct: 495 LLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRG 554
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT-KGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD + Y MI +Y G+++ A L + + + K P++ TY S+I G C +EA
Sbjct: 555 TAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEA 614
Query: 240 CTMMKEMESRGCNPNFLVYNTLV 262
+ + ++G PNF +N LV
Sbjct: 615 MAFLDKAINQGICPNFATWNALV 637
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 131/289 (45%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G +N LI C+ G + A +V ++ +S P +Y+ ++
Sbjct: 340 MIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCL---PNVTTYSILIDGFAK 396
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M G P+++TY ++ + DQ + L+++M G +P+ T
Sbjct: 397 SGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMT 456
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N + L + A+ LL M+ G P++ + L+D L R + F E+
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P++V Y ++ + AG + +A LF + +G P+ TYN+MI +C GK
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576
Query: 238 EACTMMKEMES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++ + S + +P+ + Y +L+ N + EA + + +G
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQG 625
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 39/311 (12%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ +L+ C GE+ A ++ + P + YN +HAL + V
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQP--GMAPTPSMYNFFVHALCKSGKVPEAMEVV 77
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF----------------- 111
+ M D PD++T+N ++ + G+LD+ ++LDEM RSGF
Sbjct: 78 KNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSA 137
Query: 112 ---------------SPDFHTYNILLHVLGKGDKPLAALNLLNHMKE-VGFDPSVLHFTT 155
+PD TYN ++H K + A L MK+ G P ++
Sbjct: 138 GRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 156 LMDGLSRAGNLDACKYFFDEM-ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L++GL ++ NL EM K C VV + ++ Y A +L++A++L M+
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+V TY+++I G C G D+ ++++M SRGC P+ + Y LV+ L AGK+ EA
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317
Query: 275 HEVIRHMVEKG 285
+++ M+E G
Sbjct: 318 CRLVKRMLEDG 328
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 15/288 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C G + A++V++ +S F +YN +++ L + V
Sbjct: 91 TFNTLIAGLCKAGRLDEAQQVLDEMERS---GFAANLVTYNTLINGLSSAGRSGEAVLVM 147
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG-RSGFSPDFHTYNILLHVLGK 127
Q M+ PD TYN ++ + G++D+ + L+EM R+G SPD TY+IL++ L K
Sbjct: 148 QGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 128 GDKPLAALNLLNHMKEVGFD---PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
A LL M +G SV+ F TL+DG +A +LD + M GC PD
Sbjct: 205 SSNLRKADELLQEM--IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPD 262
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ +I G+++K L + M+++G P+V TY ++ G C AGK EAC ++K
Sbjct: 263 VVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVK 322
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M GC PN + Y+ + L KL A++++ + +KG+ +V+
Sbjct: 323 RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVA 370
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 17/274 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +GF T+N LI + G G A V++ + P +YNAI+H
Sbjct: 115 MERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT------PDTQTYNAIIHGFCK 168
Query: 58 I----RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFS 112
R Y +E + Q+ G +PD TY+I++ + L + LL EM GR
Sbjct: 169 SGEIDRAYGFLEEMKQR---AGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC 225
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
+N L+ K A LL+ M E G P V+ ++T++DGL R G++D
Sbjct: 226 ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
++M ++GC PDVV YTV++T AG++ +A L M+ G PN TY+ + G C
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
K D A ++ + +G + + + TL+ +++
Sbjct: 346 IDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVK 379
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 5/218 (2%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNL 137
D TY +++ A G+L LL EM + G +P YN +H L K K A+ +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ +MK+ P V+ F TL+ GL +AG LD + DEM G ++V Y +I +
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPNFL 256
AG +A + GM T P+ TYN++I GFC +G+ D A ++EM+ R GC+P+
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
Y+ L++ L + L +A E+++ M+ + V F
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAF 231
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 15/296 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T T+N +I C ++G ++ E ++ P +YN ++ +L
Sbjct: 28 MARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER---GHHPDVVTYNTLIDSLCK 84
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS--PDF 115
+ ++ MS G P+++TY++++ ++G++D+ L+ EM R P+
Sbjct: 85 AGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNI 144
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKE--VGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN L L K A L+ +++ + P + F+TL+DGL + G +D F
Sbjct: 145 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVF 204
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M G +P+V+ Y ++ A ++E+A + + M+ KG P+V TY+ ++ FC A
Sbjct: 205 DDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 264
Query: 234 GKFDEACTMMKEMESRGCNPNFLV-----YNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ DEA ++ M SRGC PN LV +N L++ AG +A + MV K
Sbjct: 265 SRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 320
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 46/266 (17%)
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLL-DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
+ YNIV+ + R G + + EM R G +P TYN +++ L K + A + L
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ E G P V+ + TL+D L +AG+L+ + +M+++GC+P+VV Y+V+I
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 199 GELEKAQDLFDGMITKG--QLPNVFTYNS------------------------------- 225
G +++A++L M K LPN+ TYNS
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 226 ------MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+I G C G+ DEAC++ +M + G PN + YN LV+ L A K+ AH +I
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240
Query: 280 HMVEKG------KYIHLVSKFKRYKR 299
MV+KG Y LV F + R
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASR 266
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 143/317 (45%), Gaps = 46/317 (14%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ LI C CG++ A V + I + P +YNA+++ L + + +
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAG---GYVPNVITYNALVNGLCKADKMERAHAMI 239
Query: 69 QQMSDEGYAPDILTY----------------------------------------NIVMC 88
+ M D+G PD++TY NI++
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIA 299
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+ G +Q L +EM PD T+ L+ L K + AA ++L+ M +G P
Sbjct: 300 GACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPP 359
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V+ + L+ GL ++G ++ F +EM + GC+PD + Y ++ + A + A L
Sbjct: 360 NVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLV 419
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ + G P+ TYN ++ G +GK ++A T+++EM +G P+ + S L +
Sbjct: 420 SELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRS 479
Query: 269 GKLAEAHEVIRHMVEKG 285
G LA E++R ++ KG
Sbjct: 480 GNLAGTMELLRVVLAKG 496
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 129/249 (51%), Gaps = 8/249 (3%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN I++ L +++++ + G+ PD++TYN ++ + + G L++ RL
Sbjct: 35 PTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRL 94
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD--PSVLHFTTLMDGL 160
+M G P+ TY++L++ L K + A L+ M D P+++ + + +DGL
Sbjct: 95 HGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGL 154
Query: 161 SRAG-NLDACKYFFDEMANKGCM---PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ +AC+ G + PD V ++ +I G++++A +FD MI G
Sbjct: 155 CKQSMTAEACELM--RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGY 212
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
+PNV TYN+++ G C A K + A M++ M +G P+ + Y+ LV A ++ EA E
Sbjct: 213 VPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALE 272
Query: 277 VIRHMVEKG 285
++ M +G
Sbjct: 273 LLHGMASRG 281
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 118/239 (49%), Gaps = 6/239 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI C G A + E + N +P ++ A++ L Q + +
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAK---NLQPDVMTFGALIDGLCKAGQVEAARDIL 349
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M + G P+++TYN ++ + G++++ + L+EM SG PD TY L++ L +
Sbjct: 350 DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 409
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL L++ +K G+DP + + L+DGL ++G + +EM KG PD +
Sbjct: 410 SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 469
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ +G L +L ++ KG LP+ T +S++ C +GK D+ M+KE E
Sbjct: 470 AACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 113/238 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P K ++N ++ ++ ++++M + PD++T+ ++ + G+++ +
Sbjct: 289 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDI 348
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LD MG G P+ TYN L+H L K + A L M G P + + +L+ L R
Sbjct: 349 LDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR 408
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
A D E+ + G PD V Y +++ +G+ E+A + + M+ KG P+ FT
Sbjct: 409 ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 468
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+ + G +G +++ + ++G P+ ++++ + +GKL + +I+
Sbjct: 469 FAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 39/311 (12%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ +L+ C GE+ A ++ + P + YN +HAL + V
Sbjct: 20 TYFVLVRAHCLAGELQAAMDLLREMEQQP--GMAPTPSMYNFFVHALCKSGKVPEAMEVV 77
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF----------------- 111
+ M D PD++T+N ++ + G+LD+ ++LDEM RSGF
Sbjct: 78 KNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSA 137
Query: 112 ---------------SPDFHTYNILLHVLGKGDKPLAALNLLNHMKE-VGFDPSVLHFTT 155
+PD TYN ++H K + A L MK+ G P ++
Sbjct: 138 GRSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI 197
Query: 156 LMDGLSRAGNLDACKYFFDEM-ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L++GL ++ NL EM K C VV + ++ Y A +L++A++L M+
Sbjct: 198 LINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEH 257
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+V TY+++I G C G D+ ++++M SRGC P+ + Y LV+ L AGK+ EA
Sbjct: 258 GCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEA 317
Query: 275 HEVIRHMVEKG 285
+++ M+E G
Sbjct: 318 CRLVKRMLEDG 328
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 149/288 (51%), Gaps = 15/288 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C G + A++V++ +S F +YN +++ L + V
Sbjct: 91 TFNTLIAGLCKAGRLDEAQQVLDEMERS---GFAANLVTYNTLINGLSSAGRSGEAVLVM 147
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG-RSGFSPDFHTYNILLHVLGK 127
Q M+ PD TYN ++ + G++D+ + L+EM R+G SPD TY+IL++ L K
Sbjct: 148 QGMT---TTPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCK 204
Query: 128 GDKPLAALNLLNHMKEVGFD---PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
A LL M +G SV+ F TL+DG +A +LD + M GC PD
Sbjct: 205 SSNLRKADELLQEM--IGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPD 262
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ +I G+++K L + M+++G P+V TY ++ G C AGK EAC ++K
Sbjct: 263 VVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVK 322
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M GC PN + Y+ + L KL A++++ + +KG+ +V+
Sbjct: 323 RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVA 370
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 113/218 (51%), Gaps = 5/218 (2%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNL 137
D TY +++ A G+L LL EM + G +P YN +H L K K A+ +
Sbjct: 17 DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ +MK+ P V+ F TL+ GL +AG LD + DEM G ++V Y +I +
Sbjct: 77 VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPNFL 256
AG +A + GM T P+ TYN++I GFC +G+ D A ++EM+ R GC+P+
Sbjct: 137 AGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
Y+ L++ L + L +A E+++ M+ + V F
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAF 231
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 17/274 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +GF T+N LI + G G A V++ + P +YNAI+H
Sbjct: 115 MERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT------PDTQTYNAIIHGFCK 168
Query: 58 I----RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFS 112
R Y +E + Q+ G +PD TY+I++ + L + LL EM GR
Sbjct: 169 SGEIDRAYGFLEEMKQR---AGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCC 225
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
+N L+ K A LL+ M E G P V+ ++T++DGL R G++D
Sbjct: 226 ASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFAL 285
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
++M ++GC PDVV YTV++T AG++ +A L M+ G PN TY+ + G C
Sbjct: 286 LEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCK 345
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
K D A ++ + +G + + + L+ +++
Sbjct: 346 IDKLDMANDLLTSIRDKGRITDVVAFEALLLSVK 379
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TFNIL+ C G++ + V + +K + +P +YN+++
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI---KPNFVTYNSLMDGYCL 342
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + ++ M+ G PDI +Y+I++ ++ K D+ L EM R PD T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L K + AL L++ M + G P++ + +++D L + +D ++
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLK 462
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P++ Y+++I +G+LE A+ +F+G++ KG NV TY MI+GFC+ G F+
Sbjct: 463 DKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFN 522
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ +ME GC P+ Y ++ +L + A +++R M+ +G
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 136/269 (50%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GE A +++R + L +P YN I+ ++ ++ ++ +M +G
Sbjct: 200 LCKVGETRAALDLLQR-VDGNLV--QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGI 256
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD++TY+ ++ LGKL+ L ++M PD +T+NIL++ K K
Sbjct: 257 SPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ + M + G P+ + + +LMDG ++ K F+ MA G PD+ Y++MI +
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+ ++A +LF M K +P+V TY+S+I G +G+ A ++ +M RG P
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIR 436
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN+++ L ++ +A ++ + +KG
Sbjct: 437 TYNSILDALCKIHQVDKAIALLTKLKDKG 465
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 134/273 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N +I + +V L + + F + P +Y+A++ + + ++ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
E PD+ T+NI++ A + GK+ + + D M + G P+F TYN L+ +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A ++ N M + G +P + ++ +++G + D F EM K +PDVV Y+ +I
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+G + A L D M +G P + TYNS++ C + D+A ++ +++ +G
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN Y+ L+ L +GKL +A +V ++ KG
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKG 500
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G T++ LI +G ++ F K L N +P ++N +++A +
Sbjct: 251 MISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V+ M +G P+ +TYN +M + ++++ + + M + G +PD +Y+I
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K K A+NL M P V+ +++L+DGLS++G + D+M ++G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P + Y ++ + +++KA L + KG PN++TY+ +I+G C +GK ++A
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + +G N N Y ++ G EA ++ M + G
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 114/219 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ ++ GY PD +T+ ++ G++ Q D++ GF D +Y L+H L
Sbjct: 142 VFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLC 201
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + AAL+LL + P+V+ + T++D + + ++ F EM +KG PDVV
Sbjct: 202 KVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVV 261
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I+ + G+L A DLF+ MI + P+V+T+N ++ FC GK E T+ M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PNF+ YN+L+ ++ +A + M + G
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGG 360
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 124/256 (48%), Gaps = 6/256 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N L+ C EV A+ + + + P SY+ +++
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV---NPDIQSYSIMINGFCK 377
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I+++ ++++M + PD++TY+ ++ + G++ +L+D+M G P T
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRT 437
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +L L K + A+ LL +K+ G P++ ++ L+ GL ++G L+ + F+ +
Sbjct: 438 YNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLL 497
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG +V YT+MI + G +A L M G +P+ TY +I + D
Sbjct: 498 VKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEND 557
Query: 238 EACTMMKEMESRGCNP 253
A +++EM +RG P
Sbjct: 558 MAEKLLREMIARGVRP 573
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 88/187 (47%), Gaps = 4/187 (2%)
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
F+RLL R +P +N +L L K L L M+ G P++++ L++
Sbjct: 73 FNRLL----RRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+ G + F ++ G +PD + +T +I G++++A D ++ G
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHF 188
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ +Y ++I G C G+ A +++ ++ PN ++YNT++ ++ + EA ++
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 279 RHMVEKG 285
M+ KG
Sbjct: 249 SEMISKG 255
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 145/285 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI + G + V K + + +P Y I+H L ++
Sbjct: 189 VVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKR 248
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y +M +G +P++ TYN ++ +G L + LL+EM +PD +T+NI
Sbjct: 249 VGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 308
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LGK K A++L MK P+++ +T+L+DGL + +L+ +M +G
Sbjct: 309 LIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 368
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV YT+++ + G LE A+ F ++ KG NV TYN MI G C AG F +
Sbjct: 369 IQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 428
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +ME +GC P+ + + T++ L + +A + +R M+ +G
Sbjct: 429 DLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
V F + L P ++ IL +L+ + Y + +++Q G P++ T NI++
Sbjct: 78 VASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINC 137
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
L + + + + G+ PD T N L+ L + AL + + GF
Sbjct: 138 FCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLD 197
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + TL++GL +AG A ++ PDVV YT +I + A DL+
Sbjct: 198 QVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYS 257
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
MI KG PNVFTYN++I GFC+ G EA +++ EM+ + NP+ +N L+ L G
Sbjct: 258 EMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEG 317
Query: 270 KLAEAHEVIRHMVEKGKYIHLVS 292
K+ EA + M K + ++V+
Sbjct: 318 KIDEAISLFEEMKHKNMFPNIVT 340
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 132/291 (45%), Gaps = 6/291 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
NG T NILI C + A V +K + P + N ++ L
Sbjct: 121 SNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKR---GYHPDAITLNTLIKGLCFCG 177
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ K + + ++ +G+ D ++Y ++ + G+ RLL ++ PD Y
Sbjct: 178 EIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYT 237
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++H L K + A +L + M G P+V + TL+ G GNL +EM K
Sbjct: 238 TIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLK 297
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PDV + ++I + G++++A LF+ M K PN+ TY S+I G C + A
Sbjct: 298 NINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERA 357
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ K+M+ +G P+ Y L+ L G+L A + +H++ KG ++++
Sbjct: 358 IALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNV 408
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 9/172 (5%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ N M + P HF ++ L + + F + + G P++ ++I
Sbjct: 77 AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ + A +F ++ +G P+ T N++I+G C G+ A ++ ++G
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196
Query: 254 NFLVYNTLVSNLRNAGKLA---------EAHEVIRHMVEKGKYIHLVSKFKR 296
+ + Y TL++ L AG+ E H V +V IH + K KR
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKR 248
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E GF T+ ++ C G LA RK+ ER IK+ + Y+ ++
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ-------YSIVID 253
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L + ++ +M +G D++TY+ ++ GK D ++L EM P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D T++ L+ V K K L A L N M G P + + +L+DG + L F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC PD+V Y+++I SY A ++ LF + +KG +PN TYN+++ GFC +
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GK + A + +EM SRG P+ + Y L+ L + G+L +A E+ M
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A +++R ++ + F+P + +Y +L+ L L ++++M +
Sbjct: 185 LCLKGRVSEALVLIDRMVE---YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 241
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
++ Y+IV+ + + G D L +EM G D TY+ L+ L K
Sbjct: 242 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 301
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+L M P V+ F+ L+D + G L K ++EM +G PD + Y +I +
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
L +A +FD M++KG P++ TY+ +I +C A + D+ + +E+ S+G PN +
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTLV +GKL A E+ + MV +G
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
N P +++A++ +++ KL+E +Y +M G APD +TYN ++ + L
Sbjct: 310 NIIPDVVTFSALIDVF--VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+ +++ D M G PD TY+IL++ K + + L + G P+ + + TL+
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
G ++G L+A K F EM ++G P VV Y +++ GEL KA ++F+ M
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ YN +I G C A K D+A ++ + +G P+ + YN ++ L G L+EA +
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 278 IRHMVEKG 285
R M E G
Sbjct: 548 FRKMKEDG 555
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 35/243 (14%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++T + ++ G++ + L+D M GF PD TY +L+ L K AL+L
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG----------------- 180
M+E SV+ ++ ++D L + G+ D F+EM KG
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 181 ------------------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+PDVV ++ +I ++ G+L +A++L++ MIT+G P+ T
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I GFC EA M M S+GC P+ + Y+ L+++ A ++ + + R +
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 283 EKG 285
KG
Sbjct: 413 SKG 415
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+++ ++ M +G PDI+TY+I++ + + ++D RL
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
E+ G P+ TYN L+ + K AA L M G PSV+ + L+DGL
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L+ F++M + Y ++I A +++ A LF + KG P+V T
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
YN MI G C G EA + ++M+ GC P+ YN L+ L + E+I M
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
GY PD +T++ ++ G++ + L+D M PD T + L++ L + A
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L L++ M E GF P + + +++ L ++GN F +M + VV Y+++I S
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G + A LF+ M KG +V TY+S+I G C GK+D+ M++EM R P+
Sbjct: 255 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 314
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ L+ GKL EA E+ M+ +G
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 3/261 (1%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
+V A + E I+S+ P +N + A+ +QY L+ + M G D+
Sbjct: 50 KVNDAIDLFESMIQSRPL---PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
T I++ R KL +L + G+ PD T++ L++ + A+ L++ M
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
E+ P ++ +TL++GL G + D M G PD V Y ++ +G
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
A DLF M + +V Y+ +I C G FD+A ++ EME +G + + Y++L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286
Query: 262 VSNLRNAGKLAEAHEVIRHMV 282
+ L N GK + +++R M+
Sbjct: 287 IGGLCNDGKWDDGAKMLREMI 307
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++++S +G P+ +TYN ++ + GKL+ L EM G P TY ILL L
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL + M++ + + ++ G+ A +D F +++KG PDVV
Sbjct: 467 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 526
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y VMI G L +A LF M G P+ FTYN +IR + +++EM
Sbjct: 527 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 586
Query: 247 ESRG 250
+ G
Sbjct: 587 KVCG 590
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P + T+ IL+ C GE+ A ++ E+ KS++ YN I+H +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM---TLGIGIYNIIIHGMCN 502
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +SD+G PD++TYN+++ + G L + L +M G +PD T
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 562
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
YNIL+ G ++++ L+ MK GF ++D LS
Sbjct: 563 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 606
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L M + P+ + F L ++R D F M G D+ T+MI
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y +L A + G P+ T+++++ GFC+ G+ EA ++ M P
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +TL++ L G+++EA +I MVE G
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 41/210 (19%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N L+ C G++ A+++ + + P +Y +L L +
Sbjct: 415 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR---GVPPSVVTYGILLDGLCDNGEL 471
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M I YNI++ K+D L + G PD TYN++
Sbjct: 472 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 531
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K G+L F +M GC
Sbjct: 532 IGGLCK-----------------------------------KGSLSEADMLFRKMKEDGC 556
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
PD Y ++I +++ L + +L + M
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEM 586
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T T N+LI C G V A +++ I F P + +YN ++ L
Sbjct: 150 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD---GFEPDQITYNTFVNGLCQ 206
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
V M EG+ PD+ TYNIV+ + G+L++ +L++M G PD T
Sbjct: 207 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 266
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L G++ AL+L + G P V F L++ L + G+ F+EM
Sbjct: 267 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 326
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N GC PD V Y +I + + G+L KA DL M + G + TYN++I G C + +
Sbjct: 327 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 386
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M+ +G + N + +NTL+ L K+ +A E+I M+ +G
Sbjct: 387 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I +GF T+N + C VG A KV++ ++ P +YN +++ L
Sbjct: 186 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKN 242
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q + + + QM D G PDI T+N ++ A +L++ L ++ G SPD +T+
Sbjct: 243 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 302
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P AL L MK G P + + TL+D L G L +M +
Sbjct: 303 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 362
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC + Y +I +E+A+++FD M +G N T+N++I G C K D+
Sbjct: 363 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 422
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ +M S G PN + YN+++++ G + +A +++ M G + +V+
Sbjct: 423 AFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 476
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD--- 97
+P ++N ++ AL Q + + ++MS G APD T+ +M G ++
Sbjct: 85 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 144
Query: 98 --------------------------QFHRLLDEMG------RSGFSPDFHTYNILLHVL 125
+ R+ D +G GF PD TYN ++ L
Sbjct: 145 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 204
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ D AL +++ M + G DP V + +++ L + G L+ K ++M ++GC+PD+
Sbjct: 205 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 264
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ +I + LE+A DL + KG P+V+T+N +I C G A + +E
Sbjct: 265 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 324
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M++ GC P+ + YNTL+ NL + GKL +A ++++ M G
Sbjct: 325 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+NI++ C C G++ A+ ++ + + P ++N ++ AL
Sbjct: 220 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL---PDITTFNTLIAALCT 276
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Q++ +G +PD+ T+NI++ A ++G RL +EM SG +PD T
Sbjct: 277 GNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 336
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K AL+LL M+ G S + + T++DGL + ++ + FD+M
Sbjct: 337 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 396
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + + + +I +++ A +L + MI++G PN TYNS++ +C G
Sbjct: 397 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 456
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++ M + G + + Y TL++ L AG+ A +V+R M KG
Sbjct: 457 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 2/249 (0%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
LF + YN +L+ L+ + KL+E VY +M G PD++T+N +M A R ++
Sbjct: 47 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 106
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+L+EM G +PD T+ L+ + AAL + M E+G + + L+
Sbjct: 107 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 158 DGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+G + G + DA Y E+A+ G PD + Y + + A + D M+ +G
Sbjct: 167 NGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 225
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+VFTYN ++ C G+ +EA ++ +M RGC P+ +NTL++ L +L EA +
Sbjct: 226 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 285
Query: 277 VIRHMVEKG 285
+ R + KG
Sbjct: 286 LARQVTVKG 294
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 14/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G TFN LI CT + LAR+V + + ++ F N +++
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF-------NILIN 307
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL + L ++++M + G PD +TYN ++ LGKL + LL +M +G
Sbjct: 308 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 367
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN ++ L K + A + + M G + + F TL+DGL + +D
Sbjct: 368 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 427
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M ++G P+ + Y ++T Y G+++KA D+ + M G +V TY ++I G C A
Sbjct: 428 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 487
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G+ A +++ M +G P YN ++ +L + +A + R M E G+
Sbjct: 488 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 540
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFNILI C G+ LA ++ E S P + +YN ++ L + +
Sbjct: 294 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS---GCTPDEVTYNTLIDNLCSLGKL 350
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M G +TYN ++ + ++++ + D+M G S + T+N L
Sbjct: 351 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 410
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A L+N M G P+ + + +++ + G++ + M G
Sbjct: 411 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 470
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
DVV Y +I AG + A + GM KG P YN +++ +A +
Sbjct: 471 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 530
Query: 242 MMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
+ +EM G P+ L Y + L R G + EA + + MV+KG +I S F+
Sbjct: 531 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG-FIPEFSSFR 584
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIRQYKLIEWV 67
T+N LI C+ G++G A +++ + P +YN I+ L + + E V
Sbjct: 336 TYNTLIDNLCSLGKLGKALDLLKDMESTGC----PRSTITYNTIIDGLCKKMRIEEAEEV 391
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN-ILLHVLG 126
+ QM +G + + +T+N ++ + K+D L+++M G P+ TYN IL H
Sbjct: 392 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 451
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+GD AA ++L M GF+ V+ + TL++GL +AG M KG P
Sbjct: 452 QGDIKKAA-DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 510
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG-KFDEACTMMKE 245
Y ++ S + A LF M G+ P+ TY + RG C G EA M E
Sbjct: 511 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 570
Query: 246 MESRGCNPNFLVYNTLVSNLRNAG 269
M +G P F + L L N G
Sbjct: 571 MVDKGFIPEFSSFRMLAEGLLNLG 594
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 144/288 (50%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E GF T+ ++ C G LA RK+ ER IK+ + Y+ ++
Sbjct: 230 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ-------YSIVID 282
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L + ++ +M +G D++TY+ ++ GK D ++L EM P
Sbjct: 283 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 342
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D T++ L+ V K K L A L N M G P + + +L+DG + L F
Sbjct: 343 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 402
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC PD+V Y+++I SY A ++ LF + +KG +PN TYN+++ GFC +
Sbjct: 403 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 462
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GK + A + +EM SRG P+ + Y L+ L + G+L +A E+ M
Sbjct: 463 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 510
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A +++R ++ + F+P + +Y +L+ L L ++++M +
Sbjct: 214 LCLKGRVSEALVLIDRMVE---YGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNI 270
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
++ Y+IV+ + + G D L +EM G D TY+ L+ L K
Sbjct: 271 KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAK 330
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+L M P V+ F+ L+D + G L K ++EM +G PD + Y +I +
Sbjct: 331 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 390
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
L +A +FD M++KG P++ TY+ +I +C A + D+ + +E+ S+G PN +
Sbjct: 391 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI 450
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTLV +GKL A E+ + MV +G
Sbjct: 451 TYNTLVLGFCQSGKLNAAKELFQEMVSRG 479
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
N P +++A++ +++ KL+E +Y +M G APD +TYN ++ + L
Sbjct: 339 NIIPDVVTFSALIDVF--VKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 396
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+ +++ D M G PD TY+IL++ K + + L + G P+ + + TL+
Sbjct: 397 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 456
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
G ++G L+A K F EM ++G P VV Y +++ GEL KA ++F+ M
Sbjct: 457 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 516
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ YN +I G C A K D+A ++ + +G P+ + YN ++ L G L+EA +
Sbjct: 517 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 576
Query: 278 IRHMVEKG 285
R M E G
Sbjct: 577 FRKMKEDG 584
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 35/243 (14%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++T + ++ G++ + L+D M GF PD TY +L+ L K AL+L
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG----------------- 180
M+E SV+ ++ ++D L + G+ D F+EM KG
Sbjct: 262 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 321
Query: 181 ------------------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+PDVV ++ +I ++ G+L +A++L++ MIT+G P+ T
Sbjct: 322 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 381
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I GFC EA M M S+GC P+ + Y+ L+++ A ++ + + R +
Sbjct: 382 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 441
Query: 283 EKG 285
KG
Sbjct: 442 SKG 444
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 110/239 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+++ ++ M +G PDI+TY+I++ + + ++D RL
Sbjct: 377 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 436
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
E+ G P+ TYN L+ + K AA L M G PSV+ + L+DGL
Sbjct: 437 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 496
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L+ F++M + Y ++I A +++ A LF + KG P+V T
Sbjct: 497 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 556
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
YN MI G C G EA + ++M+ GC P+ YN L+ L + E+I M
Sbjct: 557 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 107/211 (50%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
GY PD +T++ ++ G++ + L+D M PD T + L++ L + A
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L L++ M E GF P + + +++ L ++GN F +M + VV Y+++I S
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G + A LF+ M KG +V TY+S+I G C GK+D+ M++EM R P+
Sbjct: 284 LCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD 343
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ L+ GKL EA E+ M+ +G
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRG 374
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%), Gaps = 3/261 (1%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
+V A + E I+S+ P +N + A+ +QY L+ + M G D+
Sbjct: 79 KVNDAIDLFESMIQSRPL---PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 135
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
T I++ R KL +L + G+ PD T++ L++ + A+ L++ M
Sbjct: 136 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 195
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
E+ P ++ +TL++GL G + D M G PD V Y ++ +G
Sbjct: 196 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 255
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
A DLF M + +V Y+ +I C G FD+A ++ EME +G + + Y++L
Sbjct: 256 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 315
Query: 262 VSNLRNAGKLAEAHEVIRHMV 282
+ L N GK + +++R M+
Sbjct: 316 IGGLCNDGKWDDGAKMLREMI 336
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 87/184 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++++S +G P+ +TYN ++ + GKL+ L EM G P TY ILL L
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 495
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL + M++ + + ++ G+ A +D F +++KG PDVV
Sbjct: 496 DNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVV 555
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y VMI G L +A LF M G P+ FTYN +IR + +++EM
Sbjct: 556 TYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEM 615
Query: 247 ESRG 250
+ G
Sbjct: 616 KVCG 619
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P + T+ IL+ C GE+ A ++ E+ KS++ YN I+H +
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM---TLGIGIYNIIIHGMCN 531
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +SD+G PD++TYN+++ + G L + L +M G +PD T
Sbjct: 532 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFT 591
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
YNIL+ G ++++ L+ MK GF ++D LS
Sbjct: 592 YNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLS 635
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L M + P+ + F L ++R D F M G D+ T+MI
Sbjct: 83 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 142
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y +L A + G P+ T+++++ GFC+ G+ EA ++ M P
Sbjct: 143 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 202
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +TL++ L G+++EA +I MVE G
Sbjct: 203 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 234
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 74/210 (35%), Gaps = 41/210 (19%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N L+ C G++ A+++ + + + P +Y +L L +
Sbjct: 444 GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGV---PPSVVTYGILLDGLCDNGEL 500
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M I YNI++ K+D L + G PD TYN++
Sbjct: 501 NKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVM 560
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K G+L F +M GC
Sbjct: 561 IGGLCK-----------------------------------KGSLSEADMLFRKMKEDGC 585
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
PD Y ++I +++ L + +L + M
Sbjct: 586 TPDDFTYNILIRAHLGGSGLISSVELIEEM 615
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 145/298 (48%), Gaps = 13/298 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHA 54
M E G A+T+ ILI C + GLA K+ E+ K +F +Y I+ +
Sbjct: 103 MTEKGLFGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVF-------TYGMIIDS 155
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L ++ +M G PD++ Y+ +M R G+L + EM G S D
Sbjct: 156 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 215
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TYN L+H L + LN M + GF P FT L+DGL + G + + +
Sbjct: 216 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 275
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M +KG PD++ Y ++ G+LE A LF+ + +G NVF+YN +I G+C
Sbjct: 276 LMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 335
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
K DEA + +EM +G P+ + YNTL+ L +G++ A ++ M G+++ L +
Sbjct: 336 KIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 393
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 144/285 (50%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
M++ GF A TF ILI C G+VG A++++E K K P +YN +++ L
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK----EPDILTYNTLMNGLC 297
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ Q + +++ ++D G ++ +YNI++ + K+D+ RL +EM G P
Sbjct: 298 LVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTV 357
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ L + + A L M+ G + + L+DGL + G+L+ F +
Sbjct: 358 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSI 417
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
P++ +++++ AG+LE+A FD + G P+ YN +I G C G
Sbjct: 418 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 477
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EA ++ +ME +GC P+ + +N ++ NL ++ EA +++ M
Sbjct: 478 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 522
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 7/229 (3%)
Query: 67 VYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ +M+++G D TY I+ +C + G + H E + D TY +++
Sbjct: 99 LFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKLH----EKMKGNCKGDVFTYGMIID 154
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K AL++ + M G P V+ +++LMDGL R G L FF EM +G
Sbjct: 155 SLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISA 214
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DV Y +I AG ++ + M+ +G P+ FT+ +I G C GK EA ++
Sbjct: 215 DVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 274
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M +G P+ L YNTL++ L G+L +A ++ + ++G +++ S
Sbjct: 275 ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFS 323
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 73/175 (41%), Gaps = 34/175 (19%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------------------------ 180
GF+P + TTL+ G+ + FDEM KG
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 181 ----------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
C DV Y ++I S G +A D+F MI G LP+V Y+S++ G
Sbjct: 132 IKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C G+ EA KEME RG + + YN+L+ L AG E + MV++G
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 246
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 51/141 (36%), Gaps = 34/141 (24%)
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA----- 233
+G PD V T ++ + A LFD M KG + TY +I G C A
Sbjct: 71 RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130
Query: 234 -----------------------------GKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
G EA M EM G P+ +VY++L+
Sbjct: 131 AIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+L EA E + M +G
Sbjct: 191 LCRFGRLKEALEFFKEMEGRG 211
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 144/290 (49%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TA T+N LI C G++ A + ++ + P ++YN ++HAL
Sbjct: 332 MKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAIL---PTVSTYNLLIHALFL 388
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + M D G PD +TYNI++ R G + L DEM G P T
Sbjct: 389 EGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVT 448
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++VL K ++ AA +L + G P ++ F L+DG GNLD EM
Sbjct: 449 YTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMD 508
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ +PD V Y ++ G++E+A++L M +G P+ +YN++I G+ G +
Sbjct: 509 KRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDIN 568
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEKG 285
+A T+ EM S G NP L YN L+ L G LAE E+++ MV KG
Sbjct: 569 DAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAE--ELLKEMVSKG 616
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N +I C+ G V AR V++ +K++ P +Y +++ + +
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLD-IMKNR--GVEPDSYTYGSLISGMCKGGKL 322
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + ++M + G P +TYN ++ G L + DEM R P TYN+L
Sbjct: 323 EEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLL 382
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L K A ++ M + G P + + L++G R GN DEM +KG
Sbjct: 383 IHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGI 442
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P +V YT +I ++ A DLF+ +I +G P++ +N++I G C G D A
Sbjct: 443 QPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFA 502
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+ R P+ + YNTL+ GK+ EA E+++ M +G
Sbjct: 503 LLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRG 546
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 136/291 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TFN ++ ++ V + + + ++N +++ L +
Sbjct: 192 MKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGK 251
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + M + G P+++TYN V+ G+++ +LD M G PD +TY
Sbjct: 252 LKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGS 311
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + KG K A +L MKE+G P+ + + TL+DG G+L + DEM +
Sbjct: 312 LISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRA 371
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P V Y ++I + G++++A + M G +P+ TYN +I G+C G +A
Sbjct: 372 ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAF 431
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ EM S+G P + Y +L+ L ++ A ++ ++ +G L+
Sbjct: 432 NLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 129/280 (46%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F++LI C E+ E F K P ++NA+L L + Q + + +Y +M
Sbjct: 169 FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF 228
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ T+NI++ + GKL + + M G P+ TYN ++H +
Sbjct: 229 RLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVE 288
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A +L+ MK G +P + +L+ G+ + G L+ ++M G +P V Y +I
Sbjct: 289 GARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLI 348
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
Y G+L KA D M+ + LP V TYN +I + GK DEA M+K+M G
Sbjct: 349 DGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIV 408
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + YN L++ G +A + M+ KG LV+
Sbjct: 409 PDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVT 448
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 9/242 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G + T+NILI C CG A + + I +P +Y ++++ L
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISK---GIQPTLVTYTSLIYVLSK 458
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + +++++ EG +PD++ +N ++ G LD+ LL EM + PD T
Sbjct: 459 RNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVT 518
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + K A LL MK G P + + TL+ G S+ G+++ DEM
Sbjct: 519 YNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML 578
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P ++ Y +I + + A++L M++KG P+ TY S+I G GK D
Sbjct: 579 SIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVD 635
Query: 238 EA 239
++
Sbjct: 636 DS 637
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 97/205 (47%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ +++++ A L + D D M G P T+N +L + K ++ L
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M + +V F +++ L + G L K F M N G P+VV Y +I Y + G
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+E A+ + D M +G P+ +TY S+I G C GK +EA ++++M+ G P + YNT
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ N G L +A MV +
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRA 371
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 120/224 (53%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y A++ LL + VY+ M+ +G PD++T + ++ + G++ R+ M
Sbjct: 142 YTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSME 201
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G +P+ Y+ L+H L K K AL +L MK+ P + + L+DGL ++G++
Sbjct: 202 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVA 261
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + FFDEM GC PDV Y ++I+ + AG + A +FD M + PNV TY ++I
Sbjct: 262 AARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLI 321
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G C + +A + M+ RGC P+ VY++LV L +GKL
Sbjct: 322 SGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKL 365
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+ NG T T+N L+ ++G + ++ K P +Y +++ L ++
Sbjct: 60 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKR 119
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++++M+ G A D + Y ++ + GK+ Q + M G PD T +
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + AA+ + M+ G P+ + ++ L+ GL +A +D +M
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD + Y ++I +G++ A+ FD M+ G P+V+TYN +I GFC AG D AC
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M S C+PN + Y TL+S L +L +A +HM E+G
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERG 344
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 120/240 (50%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y I+ L ++ + + ++++ G P I TYN ++ ++G+L++ LL +
Sbjct: 35 HTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 94
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ +G +PD TY L+ LGK + A L M G + +T L+ GL +AG
Sbjct: 95 IVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGK 154
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ + M ++GC+PDVV + MI AG + A +F M +G PN Y++
Sbjct: 155 IPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSA 214
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G C A K D A M+ +M+ C P+ + YN L+ L +G +A A M+E G
Sbjct: 215 LIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAG 274
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 127/233 (54%), Gaps = 4/233 (1%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N ++ A + I+ + L Q+ + G DI TY ++ + K+ + L++++
Sbjct: 7 NGLVKAGMLIQAHSLA----QETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITA 62
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+G +P TYN LL+ L K + A++LL + + G P V+ +T+L+DGL +
Sbjct: 63 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFE 122
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
F EMA++G D VCYT +I + AG++ +A ++ M ++G +P+V T ++MI
Sbjct: 123 AYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMID 182
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G C AG+ A + K ME+RG PN +VY+ L+ L A K+ A E++ M
Sbjct: 183 GLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 235
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 5/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G +G A ++ F + P + Y+A++H L R+ + QM
Sbjct: 184 LCKAGRIGAAVRI---FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD +TYNI++ + G + DEM +G PD +TYNIL+ K AA
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ + M P+V+ + TL+ GL + L ++ M +GC PD Y+ ++
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G+LE LFD M G + N T +I C A + DEA ++ + G P+
Sbjct: 361 KSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPY 418
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
YN+++S L +GK+ E V + M
Sbjct: 419 AYNSIISALIKSGKVNEGQAVYQEM 443
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T++IL++ L K + A +L G + +TT++D L++ + +++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P + Y ++ G LE+A DL ++ G P+V TY S+I G +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + KEM SRG + + Y L+ L AGK+ +A V + M +G
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 169
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 146/268 (54%), Gaps = 3/268 (1%)
Query: 17 ICTCGEVGLARKVVERFIK-SKLF--NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
+C G + +A K+ + + S L+ NF+P SY+ I+ AL R+ ++++M
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
+G P +++Y ++ GK ++ RL +EM G P+ T+N+L+ VL K K +
Sbjct: 271 QGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 330
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +LL M + G P++L + +L++G G+L++ + F M +KGC PDV+CYTV+I
Sbjct: 331 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 390
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y ++E+A L++GM+ G+ P+V TY +++ G GK +A + M+ G
Sbjct: 391 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG 450
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ +Y ++ L G L EA E+ +
Sbjct: 451 DLYIYGIFLNGLCKNGCLFEAMELFNKL 478
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 135/259 (52%), Gaps = 6/259 (2%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +S+ +L L I+ Y + ++Y QM G +PD T NI++ + ++ +
Sbjct: 91 NPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEG 150
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
++ + R G+ PD TY L+ L + A L M+++G P+ + + TLM G
Sbjct: 151 LAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKG 210
Query: 160 LSRAGNLDACKYFFDEMANKGCM------PDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L R GN+ EM N + P V+ Y+++I + ++A+DLF+ M
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G P V +Y S+I GFC GK++EA + EM ++G PN + +N L+ L GK+ E
Sbjct: 271 QGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 330
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A +++ M+++G +L++
Sbjct: 331 AKDLLEVMIQRGIVPNLLT 349
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 140/292 (47%), Gaps = 12/292 (4%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G T NIL+ C VG V+ ++ + P +Y ++ L +
Sbjct: 125 SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR---GYIPDIVTYTTLIKGLCMEHR 181
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG------FSPD 114
++ +M G P+ +TY +M R G + +L EM F P
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+Y+I++ L K + A +L MK G P+V+ +T+L+ G G + K F+
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFN 301
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM N+G P+VV + V+I G++ +A+DL + MI +G +PN+ TYNS+I GFC+ G
Sbjct: 302 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 361
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ A + M S+GC P+ + Y L++ K+ EA ++ M++ GK
Sbjct: 362 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 413
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TFN+LI C G+V A+ ++E I+ + P +YN+++
Sbjct: 303 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV---PNLLTYNSLIEGFCL 359
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M +G PD++ Y +++ + K+++ +L + M + G PD T
Sbjct: 360 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LL L +G K A L MK G + + ++GL + G L F+++
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ D+ C+ +I AG+LE A +LF+ + + P+V TYN MI FC G+
Sbjct: 480 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 539
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+A + ++ME GC P+ + Y TL+ + KL + E++ MV++
Sbjct: 540 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 586
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
DI +N ++ + GKL+ L +++ + PD TYNI++H +G + + A L
Sbjct: 486 DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 545
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
M++ G P + + TL+ G + L+ M + DV
Sbjct: 546 QKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
FN LI C G++ A ++ E+ + +L +P +YN ++H Q ++Q
Sbjct: 490 FNCLIDGLCKAGKLETAWELFEKLPQEEL---QPDVVTYNIMIHEFCRGGQVVKANILFQ 546
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+M G PD +TY ++ + KL++ LL M + S D NIL H
Sbjct: 547 KMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV---NILRH 597
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T T N+LI C G V A +++ I F P + +YN ++ L
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD---GFEPDQITYNTFVNGLCQ 298
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
V M EG+ PD+ TYNIV+ + G+L++ +L++M G PD T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L G++ AL+L + G P V F L++ L + G+ F+EM
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N GC PD V Y +I + + G+L KA DL M + G + TYN++I G C + +
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M+ +G + N + +NTL+ L K+ +A E+I M+ +G
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I +GF T+N + C VG A KV++ ++ P +YN +++ L
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKN 334
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q + + + QM D G PDI T+N ++ A +L++ L ++ G SPD +T+
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 394
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P AL L MK G P + + TL+D L G L +M +
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 454
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC + Y +I +E+A+++FD M +G N T+N++I G C K D+
Sbjct: 455 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 514
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ +M S G PN + YN+++++ G + +A +++ M G + +V+
Sbjct: 515 AFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD--- 97
+P ++N ++ AL Q + + ++MS G APD T+ +M G ++
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 98 --------------------------QFHRLLDEMG------RSGFSPDFHTYNILLHVL 125
+ R+ D +G GF PD TYN ++ L
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ D AL +++ M + G DP V + +++ L + G L+ K ++M ++GC+PD+
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ +I + LE+A DL + KG P+V+T+N +I C G A + +E
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M++ GC P+ + YNTL+ NL + GKL +A ++++ M G
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+NI++ C C G++ A+ ++ + + P ++N ++ AL
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL---PDITTFNTLIAALCT 368
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Q++ +G +PD+ T+NI++ A ++G RL +EM SG +PD T
Sbjct: 369 GNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 428
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K AL+LL M+ G S + + T++DGL + ++ + FD+M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + + + +I +++ A +L + MI++G PN TYNS++ +C G
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++ M + G + + Y TL++ L AG+ A +V+R M KG
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 2/249 (0%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
LF + YN +L+ L+ + KL+E VY +M G PD++T+N +M A R ++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+L+EM G +PD T+ L+ + AAL + M E+G + + L+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 158 DGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+G + G + DA Y E+A+ G PD + Y + + A + D M+ +G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+VFTYN ++ C G+ +EA ++ +M RGC P+ +NTL++ L +L EA +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 277 VIRHMVEKG 285
+ R + KG
Sbjct: 378 LARQVTVKG 386
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 14/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G TFN LI CT + LAR+V + + ++ F N +++
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF-------NILIN 399
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL + L ++++M + G PD +TYN ++ LGKL + LL +M +G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN ++ L K + A + + M G + + F TL+DGL + +D
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M ++G P+ + Y ++T Y G+++KA D+ + M G +V TY ++I G C A
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G+ A +++ M +G P YN ++ +L + +A + R M E G+
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFNILI C G+ LA ++ E S P + +YN ++ L + +
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS---GCTPDEVTYNTLIDNLCSLGKL 442
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M G +TYN ++ + ++++ + D+M G S + T+N L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A L+N M G P+ + + +++ + G++ + M G
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
DVV Y +I AG + A + GM KG P YN +++ +A +
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 242 MMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
+ +EM G P+ L Y + L R G + EA + + MV+KG +I S F+
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG-FIPEFSSFR 676
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIRQYKLIEWV 67
T+N LI C+ G++G A +++ + P +YN I+ L + + E V
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGC----PRSTITYNTIIDGLCKKMRIEEAEEV 483
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN-ILLHVLG 126
+ QM +G + + +T+N ++ + K+D L+++M G P+ TYN IL H
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+GD AA ++L M GF+ V+ + TL++GL +AG M KG P
Sbjct: 544 QGDIKKAA-DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG-KFDEACTMMKE 245
Y ++ S + A LF M G+ P+ TY + RG C G EA M E
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 662
Query: 246 MESRGCNPNFLVYNTLVSNLRNAG 269
M +G P F + L L N G
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 133/274 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F++L E+GL + E F + + F P S N +LH L +L+ + M
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G AP + TYN+++ + G L+ RL +M G SPD TYN L+ GK
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+L N MK+VG P ++ + L++ + + +F EM N G P+VV Y+ +
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I ++ G ++ A L M G LPN FTY S+I C AG EA ++ +M G
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y L+ L AG++ EA EV R M++ G
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 10 ARTFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
AR+ N L+ + G L RK I + + P +YN ++ L +
Sbjct: 195 ARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGI---APSVFTYNVMIDYLCKEGDLENSRR 251
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ QM + G +PD++TYN ++ ++G L++ L +EM G PD TYN L++
Sbjct: 252 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYC 311
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +K A + MK G P+V+ ++TL+D + G + +M G +P+
Sbjct: 312 KFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEF 371
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I + AG L +A L + M+ G N+ TY +++ G C AG+ EA + + M
Sbjct: 372 TYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM 431
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
G +PN VY LV A ++ +A ++++ M E
Sbjct: 432 LKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + T+N++I C G++ +R++ F++ + P +YN+++
Sbjct: 221 MIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL---FVQMREMGLSPDVVTYNSLIDGYGK 277
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ +M D G PDI+TYN ++ + K+ + EM +G P+ T
Sbjct: 278 VGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVT 337
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A+ LL M+ G P+ +T+L+D +AGNL ++M
Sbjct: 338 YSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDML 397
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G ++V YT ++ AG + +A+++F M+ G PN Y +++ G+ A + +
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++K+M P+ ++Y +++ + KL E ++ M +G
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRG 505
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI G+VG +V F + K P +YN +++ +
Sbjct: 256 MREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEK 315
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G P+++TY+ ++ A + G + +LL +M R+G P+ TY
Sbjct: 316 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTS 375
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K A LLN M + G +++ +T L+DGL +AG + + F M G
Sbjct: 376 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 435
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ YT ++ YI A +E A + M P++ Y S+I G C K +E
Sbjct: 436 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 495
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++EM+SRG + N ++ T++ AGK ++A + M + G +V+
Sbjct: 496 LILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVT 547
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ L+ C G + A +V +K + P + Y A++H +
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI---SPNQQVYTALVHGYIK 452
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +QM++ PD++ Y ++ KL++ +L+EM G S +
Sbjct: 453 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 512
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ K K ALN M++VG + +++ + L+DGL AG ++ +F M
Sbjct: 513 STTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRML 572
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P+V YT +I +E A+ LFD M +G P++ + ++I G G
Sbjct: 573 SLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 632
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ M + VY +LVS G+L +A + M+EKG
Sbjct: 633 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 680
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 80/211 (37%), Gaps = 35/211 (16%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T T+ +LI E G+ V+ F + +P Y +++ L
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ +M G PDI + ++ + G L + L+ M D H Y
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY-- 653
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
T+L+ G S+ G L + FF+EM KG
Sbjct: 654 ---------------------------------TSLVSGFSQCGELHQARKFFNEMIEKG 680
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+P+ V ++ Y G+L++A +L + M
Sbjct: 681 ILPEEVLCICLLREYYKRGQLDEAIELKNEM 711
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/288 (31%), Positives = 144/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T T N+LI C G V A +++ I F P + +YN ++ L
Sbjct: 242 MLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD---GFEPDQITYNTFVNGLCQ 298
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
V M EG+ PD+ TYNIV+ + G+L++ +L++M G PD T
Sbjct: 299 NDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITT 358
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L G++ AL+L + G P V F L++ L + G+ F+EM
Sbjct: 359 FNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMK 418
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N GC PD V Y +I + + G+L KA DL M + G + TYN++I G C + +
Sbjct: 419 NSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIE 478
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M+ +G + N + +NTL+ L K+ +A E+I M+ +G
Sbjct: 479 EAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I +GF T+N + C VG A KV++ ++ P +YN +++ L
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKN 334
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q + + + QM D G PDI T+N ++ A +L++ L ++ G SPD +T+
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 394
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P AL L MK G P + + TL+D L G L +M +
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 454
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC + Y +I +E+A+++FD M +G N T+N++I G C K D+
Sbjct: 455 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 514
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ +M S G PN + YN+++++ G + +A +++ M G + +V+
Sbjct: 515 AFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD--- 97
+P ++N ++ AL Q + + ++MS G APD T+ +M G ++
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 98 --------------------------QFHRLLDEMG------RSGFSPDFHTYNILLHVL 125
+ R+ D +G GF PD TYN ++ L
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ D AL +++ M + G DP V + +++ L + G L+ K ++M ++GC+PD+
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ +I + LE+A DL + KG P+V+T+N +I C G A + +E
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M++ GC P+ + YNTL+ NL + GKL +A ++++ M G
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+NI++ C C G++ A+ ++ + + P ++N ++ AL
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL---PDITTFNTLIAALCT 368
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Q++ +G +PD+ T+NI++ A ++G RL +EM SG +PD T
Sbjct: 369 GNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 428
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K AL+LL M+ G S + + T++DGL + ++ + FD+M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + + + +I +++ A +L + MI++G PN TYNS++ +C G
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++ M + G + + Y TL++ L AG+ A +V+R M KG
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 2/249 (0%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
LF + YN +L+ L+ + KL+E VY +M G PD++T+N +M A R ++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+L+EM G +PD T+ L+ + AAL + M E+G + + L+
Sbjct: 199 TAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 158 DGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+G + G + DA Y E+A+ G PD + Y + + A + D M+ +G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+VFTYN ++ C G+ +EA ++ +M RGC P+ +NTL++ L +L EA +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 277 VIRHMVEKG 285
+ R + KG
Sbjct: 378 LARQVTVKG 386
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 14/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G TFN LI CT + LAR+V + + ++ F N +++
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF-------NILIN 399
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL + L ++++M + G PD +TYN ++ LGKL + LL +M +G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN ++ L K + A + + M G + + F TL+DGL + +D
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELI 519
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M ++G P+ + Y ++T Y G+++KA D+ + M G +V TY ++I G C A
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G+ A +++ M +G P YN ++ +L + +A + R M E G+
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFNILI C G+ LA ++ E S P + +YN ++ L + +
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS---GCTPDEVTYNTLIDNLCSLGKL 442
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M G +TYN ++ + ++++ + D+M G S + T+N L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A L+N M G P+ + + +++ + G++ + M G
Sbjct: 503 IDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
DVV Y +I AG + A + GM KG P YN +++ +A +
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 242 MMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
+ +EM G P+ L Y + L R G + EA + + MV+KG +I S F+
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG-FIPEFSSFR 676
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIRQYKLIEWV 67
T+N LI C+ G++G A +++ + P +YN I+ L + + E V
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGC----PRSTITYNTIIDGLCKKMRIEEAEEV 483
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN-ILLHVLG 126
+ QM +G + + +T+N ++ + K+D L+++M G P+ TYN IL H
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCK 543
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+GD AA ++L M GF+ V+ + TL++GL +AG M KG P
Sbjct: 544 QGDIKKAA-DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG-KFDEACTMMKE 245
Y ++ S + A LF M G+ P+ TY + RG C G EA M E
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 662
Query: 246 MESRGCNPNFLVYNTLVSNLRNAG 269
M +G P F + L L N G
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 148/288 (51%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G P T T N+LI C G + A ++ + FRP + +YN +++ L
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSE---GFRPDQFTYNTLVNGLCK 320
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I K V M G PDI TYN ++ +LG++++ ++LD+M SP+ T
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K ++ A + + G P V F +L+ GL + N + F+EM
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PD Y ++I S ++ +LE+A +L M G NV YN++I GFC + +
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + EME +G + + + YNTL+ L + ++ +A +++ M+ +G
Sbjct: 501 EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+N LI C GE+ A K++++ + + P +YNAI+ +L
Sbjct: 334 MLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSR---DCSPNAVTYNAIISSLCK 390
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ +G PD+ T+N ++ L +EM G PD T
Sbjct: 391 ENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFT 450
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+ L K ALNLL M+ G +V+ + TL+DG + ++ + FDEM
Sbjct: 451 YNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEME 510
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G D V Y +I + +E A L D MI +G P+ FTYNS++ FC G
Sbjct: 511 LQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIK 570
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++ M S GCNP+ + Y TL+S L AG++ A ++R + KG
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+ +P YN +L+ L+ + KL+E + M D+ T+NI++ A + ++
Sbjct: 162 YRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRP 221
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+++EM G SPD T+ ++ +G AL + M E G + + L++
Sbjct: 222 AILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLIN 281
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G + G +D F E ++G PD Y ++ G + A ++ D M+ G P
Sbjct: 282 GFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDP 341
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+++TYNS+I G C G+ +EA ++ +M SR C+PN + YN ++S+L ++ EA E+
Sbjct: 342 DIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIA 401
Query: 279 RHMVEKG 285
R + KG
Sbjct: 402 RLLTSKG 408
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 136/270 (50%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFNILI + R + + + P + ++ I+ + + +QM
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G +T N+++ + G++DQ + E GF PD TYN L++ L K
Sbjct: 265 VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ +++ M G DP + + +L+ GL + G ++ D+M ++ C P+ V Y +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I+S +++A ++ + +KG LP+V T+NS+I+G C++ A + +EM+ +GC
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ YN L+ +L ++ KL EA +++ M
Sbjct: 445 RPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 6/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ A T+N +I C V A ++ R + SK P ++N+++ L
Sbjct: 369 MVSRDCSPNAVTYNAIISSLCKENRVDEATEIA-RLLTSK--GILPDVCTFNSLIQGLCL 425
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+K ++++M +G PD TYN+++ + KL++ LL EM +G + +
Sbjct: 426 SSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVI 485
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + A + + M+ G + + TL+DGL ++ ++ D+M
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD Y ++T + G+++KA D+ M + G P++ TY ++I G C AG+
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +++ ++ +G YN ++ L + EA + R M++K +
Sbjct: 606 VASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSE 654
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 112/240 (46%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+++N ++ AL Q + + ++M G +PD T+ +M G LD R+ ++
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQ 263
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M G T N+L++ K + AL+ + GF P + TL++GL + G+
Sbjct: 264 MVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGH 323
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
D M G PD+ Y +I+ GE+E+A + D M+++ PN TYN+
Sbjct: 324 AKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNA 383
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I C + DEA + + + S+G P+ +N+L+ L + A ++ M KG
Sbjct: 384 IISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKG 443
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI + ++ F + K RP + +YN ++ +L R+ + + ++M
Sbjct: 415 TFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEM 474
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G A +++ YN ++ + ++++ + DEM G S D TYN L+ L K +
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L++ M G P + +L+ + G++ M + GC PD+V Y +
Sbjct: 535 EDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATL 594
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I+ AG ++ A L + KG + YN +I+ + EA + +EM +
Sbjct: 595 ISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSE 654
Query: 252 NPNFLVYNTLVSNLRN-AGKLAEAHEVIRHMVEKG 285
P+ + Y + L N G + EA + M+E+G
Sbjct: 655 PPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERG 689
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 83/212 (39%), Gaps = 38/212 (17%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
PDF T L+ L + +AAL + N K+ F PS + ++ L +AG+ +
Sbjct: 58 LPPDF-TPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYM 116
Query: 170 KYFFDEMANKGC------------------------------------MPDVVCYTVMIT 193
+ +EM GC PD Y V++
Sbjct: 117 RRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLN 176
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ A +L+ + M+ + +V T+N +I+ C A + A MM+EM S G +P
Sbjct: 177 VLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSP 236
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + T++ G L A + MVE G
Sbjct: 237 DETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 141/268 (52%), Gaps = 3/268 (1%)
Query: 17 ICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
+C G + +A K+ + I N +P +YN I+ L + + + ++++M
Sbjct: 184 LCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKT 243
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
+G P I++YN ++ GK ++ RLLDEM G PD T+N+L+ L K K +
Sbjct: 244 QGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 303
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A LL M E G P ++ + +L++G G+L++ + F M +KGC PDV+ Y V+I
Sbjct: 304 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 363
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y ++E+A L++ M+ G+ PNV TY+S+++G +AGK D+A + M++ G
Sbjct: 364 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAE 423
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N Y + L L EA ++ +
Sbjct: 424 NSYTYGIFLDGLCKNDCLFEAMKLFTEL 451
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 135/256 (52%), Gaps = 6/256 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +S+N +L L I+ Y + +Y QM G + D T NI++ + +L +
Sbjct: 67 PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAA 126
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ R G+SP+ TYN L+ L + A L M+++G P V+ + TL+ GL
Sbjct: 127 FAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 163 AGNLDACKYFFDEMANK------GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
GN++ EM N C P+V+ Y +++ G ++A+ LF+ M T+G
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
+P++ +YNS+I GFC AGK++E+ ++ EM +G P+ + +N L+ L GK+ EA +
Sbjct: 247 IPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 306
Query: 277 VIRHMVEKGKYIHLVS 292
++ M+E G LV+
Sbjct: 307 LLGVMIESGIVPDLVT 322
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 147/296 (49%), Gaps = 8/296 (2%)
Query: 4 NGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
+G + T NIL+ C C V R+ F + P +YN ++ L +
Sbjct: 98 SGLSSDRCTLNILLNCLCN-VNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156
Query: 63 LIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHR-LLDEMGRSGFS--PDFH 116
++ +M G PD++TY + +C + + H+ +L+++ R + P+
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYNI++ L K + A L MK G PS++ + +L+ G AG + K DEM
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++G PD+V + V+I + G++ +A+ L MI G +P++ TYNS+I GFCM G
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ A + M S+GC P+ + YN L++ K+ EA ++ M+ GK ++++
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 15/312 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TFN+LI C G+V A+K++ I+S + P +YN+++
Sbjct: 276 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV---PDLVTYNSLIEGFCM 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M +G PD+++YN+++ + K+++ +L +EM G P+ T
Sbjct: 333 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ LL + K A L + MK G + + +DGL + L F E+
Sbjct: 393 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ ++ +I AG+LE A +LF+ + +G PNV TY MI GFC G+ D
Sbjct: 453 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 512
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK---------GKYI 288
+A ++++ME+ GC P+ + YNTL+ + KL E +++ M +K +
Sbjct: 513 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 572
Query: 289 HLVSKFKRYKRC 300
++SK ++Y+ C
Sbjct: 573 DMLSKDEKYQEC 584
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 82/193 (42%), Gaps = 6/193 (3%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M RS +P ++N LL L K +L N M+ G L++ L
Sbjct: 60 MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
L F + +G P++V Y +I + +A LF M G P+V TY +
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
Query: 226 MIRGFCMAGKFDEACTMMKEME---SR---GCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+I+G C G + A + +EM SR C PN + YN +V L G+ EA ++
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239
Query: 280 HMVEKGKYIHLVS 292
M +G ++S
Sbjct: 240 EMKTQGMIPSIIS 252
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+ + M PS+ F L+ GL++ + +++M G D +++
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
L + F G++ +G PN+ TYN++I+G CM + EA + M+ GC P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ + Y TL+ L G + A ++ + M+
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEML 201
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ A ++ E+ P +Y ++H Q + Q+M G
Sbjct: 470 LCKAGKLETAWELFEKLSNE---GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGC 526
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PDI+TYN +M Y KL++ +LL M + SPD T +I++ +L K +K L+
Sbjct: 527 TPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLH 586
Query: 137 LL 138
LL
Sbjct: 587 LL 588
Score = 38.1 bits (87), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 162 RAGNLDACK--YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ GN+ A +FF M P + + +++ + L++ M G +
Sbjct: 44 KTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSD 103
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
T N ++ C + E + RG +PN + YNTL+ L +++EA +
Sbjct: 104 RCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFL 163
Query: 280 HMVEKG 285
M + G
Sbjct: 164 RMQKLG 169
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 146/274 (53%), Gaps = 7/274 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N +I C G + AR+++E I+ K P +YN +++A + +
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIR-KGGKSAPDIVTYNTLINAFYRASRIREACAFR 192
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD+LT NI++ + G +++ +LD M +G PD TYN ++H L
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVA 252
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K + A +L M P ++ F TL+DG +AG L +EM + +PDV+ Y
Sbjct: 253 GKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITY 309
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G+++ A L + ++ +G +P+V Y S++ G C +G+ +EA ++KEM
Sbjct: 310 TILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSV 369
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
RGC ++Y++LVS AG + +A E++ MV
Sbjct: 370 RGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMV 403
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 147/285 (51%), Gaps = 3/285 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T NIL+ + G + +E KL P +YN+I+HAL +
Sbjct: 195 MKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGK 254
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + MS +PD++T+N ++ + G L + +L+EM R PD TY I
Sbjct: 255 VVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 311
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + + A LL + G+ P V+ +T+L+DGL ++G ++ EM+ +G
Sbjct: 312 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRG 371
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C VV Y+ +++ Y AG + KA+++ M++ +P +FTYN ++ G G +A
Sbjct: 372 CRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAV 431
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ ++ +RG P+ + YNTL+ L A ++ EA ++ M +G
Sbjct: 432 SLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 143/312 (45%), Gaps = 41/312 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN L+ C G + A +V+E + N P +Y +++ L + Q ++ ++
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRE---NILPDVITYTILVNGLCRVGQVQVAFYLL 329
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG------------------ 110
+++ +GY PD++ Y ++ + G++++ H+L+ EM G
Sbjct: 330 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRA 389
Query: 111 -----------------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
P TYNI+L L K A++L++ + G+ P V+ +
Sbjct: 390 GNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTY 449
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
TL+DGL +A + DEMA++GC P+ V ++ G ++ A L M
Sbjct: 450 NTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSR 509
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
K PNV Y S+I G C + + D+AC ++ M +G + Y L+ ++ + G++AE
Sbjct: 510 KRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAE 569
Query: 274 AHEVIRHMVEKG 285
A + MV +G
Sbjct: 570 AMAMYDEMVARG 581
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 148/336 (44%), Gaps = 40/336 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ +G TF ILI + G A + +E F+ P +N ++H L
Sbjct: 53 LLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGN 112
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG--FSPDFHTY 118
+++ M P+I+TYN V+ + G L++ LL+EM R G +PD TY
Sbjct: 113 PDQAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTY 172
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L++ + + A MK G +P VL L+ G+ + G+++ D M
Sbjct: 173 NTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKL 232
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQD----------------LFDGMITKGQ------ 216
G +PDV+ Y +I + AG++ +A + L DG G
Sbjct: 233 AGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALE 292
Query: 217 ----------LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
LP+V TY ++ G C G+ A +++E+ +G P+ + Y +LV L
Sbjct: 293 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 352
Query: 267 NAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
+G++ EAH++++ M +G Y LVS + R
Sbjct: 353 KSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCR 388
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 119/233 (51%), Gaps = 5/233 (2%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +W +Q +GY D+ +YN ++ + G + ++ ++ SG SP+ T+ IL
Sbjct: 12 QFFDWAGEQ---DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKIL 68
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K + + AL L + E P V F L+ GL + GN D F+ M +
Sbjct: 69 IRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG--QLPNVFTYNSMIRGFCMAGKFDEA 239
P++V Y +I+ +G LEKA++L + MI KG P++ TYN++I F A + EA
Sbjct: 129 KPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C ++M++ G NP+ L N LVS + G + EA E++ M G +++
Sbjct: 189 CAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 107/245 (43%), Gaps = 3/245 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GE+ A K+V+ + R Y++++ + +M
Sbjct: 351 LCKSGEIEEAHKLVKEM---SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P + TYNIV+ + G + + L+ ++ G+ PD TYN L+ L K ++ A +
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P+ + +++ GL R G +D EM+ K P+VV YT +I
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 527
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+ ++ A + D M +G + F Y +I G+ EA M EM +RG P+
Sbjct: 528 KSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGS 587
Query: 257 VYNTL 261
TL
Sbjct: 588 TSKTL 592
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 86/182 (47%), Gaps = 9/182 (4%)
Query: 127 KGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ +P A+ + E G+ V + L+D L ++G+ + ++ + GC P++
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNL 62
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V + ++I AG+ +A + + P+V+ +N +I G G D+A + +
Sbjct: 63 VTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFEN 122
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG--------KYIHLVSKFKRY 297
MES P + YNT++S L +G L +A E++ M+ KG Y L++ F R
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 298 KR 299
R
Sbjct: 183 SR 184
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 137/267 (51%), Gaps = 3/267 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ K++E ++ +P +YN ++ L + E V ++M EG A
Sbjct: 299 CQVGELQRVLKLIEEM---QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y ++ +LG + +RL DEM + SPDF TY ++ L + + + A L
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M +P + +T L+DG + G + ++M G P++V YT +
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GE++ A +L M KG N++TYNS++ G C AG D+A +MK+ME G +P+ +
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 535
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEK 284
Y TL+ + ++ AHE++R M+++
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDR 562
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 123/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN I H+L + + + QM G PD+++Y+ V+ ++G+L + +L++EM
Sbjct: 255 SYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ +TYN ++ +L K K A +L M G P + +TTL+DG + GN+
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FDEM + PD + YT +I G + +A LF M+ K P+ TY ++
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+C GK EA ++ +M G PN + Y L L G++ A+E++ M KG
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKG 493
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A K+ + +L P + +Y A++ + K ++ QM G
Sbjct: 403 LCQTGRVMEADKLFHEMVCKRL---EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+I+TY + + G++D + LL EM R G + +TYN L++ L K A+
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M+ GF P + +TTLMD ++ + +M ++ P VV + V++ +
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G LE + L M+ KG +PN TYNS+I+ +C+ + + M ++G P+
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 639
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ A + EA + R MV KG
Sbjct: 640 TYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 38/314 (12%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P T +L+C G+V A +V+ I + P Y ++ +
Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLREMISEGI---APDGVIYTTLIDGFCKLGNVSSAYR 379
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +PD +TY V+C + G++ + +L EM PD TY L+
Sbjct: 380 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 439
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC----- 181
K K A +L N M ++G P+++ +T L DGL + G +D EM KG
Sbjct: 440 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 499
Query: 182 ------------------------------MPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
PD V YT ++ +Y + E+ +A +L M
Sbjct: 500 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 559
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ + P V T+N ++ GFCM+G ++ ++K M +G PN YN+L+ +
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619
Query: 272 AEAHEVIRHMVEKG 285
E+ R M KG
Sbjct: 620 RATTEIYRGMCAKG 633
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y A+ L + + +M +G +I TYN ++ + G +DQ +L+ +M
Sbjct: 465 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 524
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+GF PD TY L+ K + + A LL M + P+V+ F LM+G +G L
Sbjct: 525 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 584
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + M KG MP+ Y +I Y + +++ GM KG +P+ TYN +
Sbjct: 585 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I+G C A EA + ++M +G N YN L+ K EA E+ M +G
Sbjct: 645 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 5/290 (1%)
Query: 6 FPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
+ + R F+I E G+ ARK+ ++ + L N + I H + K
Sbjct: 178 WGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLF--ISHLSEDLDGIK 235
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V+ + + G + +YNI+ + +LG++ + H+LL +M G PD +Y+ ++
Sbjct: 236 IALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ + + L L+ M+ G P+ + ++ L + G + + EM ++G
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIA 355
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD V YT +I + G + A LFD M + P+ TY ++I G C G+ EA +
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM + P+ + Y L+ GK+ EA + M++ G ++V+
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 465
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 3/230 (1%)
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+G+ +E + D G P + ++I G LD+ +L D+M G
Sbjct: 160 VGVSFGHFVEQLIYTYKDWGSDPRV--FDIFFQVLVEAGMLDEARKLFDKMLNYGLLISV 217
Query: 116 HTYNILL-HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+ N+ + H+ D AL + EVG + + + L + G +
Sbjct: 218 DSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLL 277
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M +GC+PDV+ Y+ +I Y GEL++ L + M KG PN +TYN +I C G
Sbjct: 278 QMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTG 337
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
K EA +++EM S G P+ ++Y TL+ G ++ A+ + M ++
Sbjct: 338 KVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR 387
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--LLGIR 59
GF A T+ L+ C E+ A +++ + + +L +P ++N +++ + G+
Sbjct: 528 GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL---QPTVVTFNVLMNGFCMSGML 584
Query: 60 Q--YKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ KL++W M ++G P+ TYN ++ C + + + +R M G PD
Sbjct: 585 EDGEKLLKW----MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR---GMCAKGVVPD 637
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TYNIL+ K A L M GF+ +V + L+ G + + F+
Sbjct: 638 GNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFE 697
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+M +G + D Y + G++E +L D I K + ++ T N+
Sbjct: 698 QMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + GF A ++N LI + G + +E + + +P +Y+A++ AL R
Sbjct: 183 MRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 242
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++ + ++M D G P++ T+ I + R GK+D+ + + M G PD TY +
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTV 302
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A L MK G P + + TL+D + G+LD K F+ +M G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MPDVV +T+++ A + ++A FD M +G LPN+ TYN++I G AG+ ++A
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ MES G P YN + +G+ +A E M KG ++V+
Sbjct: 423 KLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 4/261 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW-VYQQMSDEGYAPDILTYN 84
A ++ ++F K P SYN ++ LL + Y W +++ M + G APD T+N
Sbjct: 771 AYQIFDKFTKK--LGISPTLASYNCLIGELLEV-HYTEKAWDLFKDMKNVGCAPDAFTFN 827
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
+++ + GK+ + L EM PD TYNI++ L K + AL+ +
Sbjct: 828 MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
F P+ + L+DGL++ G L+ F+EM++ GC P+ + ++I Y G+ E A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
LF M+ +G P++ +Y ++ C+AG+ DEA E++S G +P+F+ YN +++
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L + ++ EA + M +G
Sbjct: 1008 LGKSQRMEEALALYNEMRNRG 1028
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 130/270 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +LI G E F+K K +P + Y +L + + QM
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+GY PD++T+ I++ + D+ D M + G P+ HTYN L+ L + +
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL LL M+ VG P+ + +D ++G F++M KG +P++V
Sbjct: 419 EDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ S G L +A+ +F+G+ G P+ TYN M++ + G+ DEA ++ EM GC
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ +V N+L+ +L AG++ EA ++ M
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 133/261 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI A T+NI+I + + K ++ F +FRP +Y ++ L + +
Sbjct: 849 MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++++MSD G P+ +NI++ ++G + +L M G PD +Y I
Sbjct: 909 LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + AL N +K G DP + + +++GL ++ ++ ++EM N+G
Sbjct: 969 LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD+ Y ++ + AG +E+A+ +++ + G P+VFTYN++IRG+ ++ + A
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088
Query: 241 TMMKEMESRGCNPNFLVYNTL 261
T+ K M GCNPN Y L
Sbjct: 1089 TVYKNMMVDGCNPNIGTYAQL 1109
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 1/283 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA T+NI I G+ G K VE F K K P + NA L++L + + +
Sbjct: 432 GVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ + + G APD +TYN++M ++G++D+ LL EM R+G PD N L+
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + A + + MK++ P+V+ + TL+ GL + G + F+ M K C P+
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPN 611
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + ++ + E+E A +F M P+V TYN++I G K + A
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH 671
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+++ + +P+ + TL+ L G++ +A + R + + ++
Sbjct: 672 QLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRF 713
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 117/244 (47%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+ P ++ ++ L R + + M +G P++ TYN ++C R G+++
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+LL M G P +TYNI + GK + A+ MK G P+++ + L
Sbjct: 423 KLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G L K F+ + G PD V Y +M+ Y G++++A +L MI G P+V
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
NS+I AG+ DEA M M+ +P + YNTL+S L G++ +A E+
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602
Query: 281 MVEK 284
M+EK
Sbjct: 603 MIEK 606
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KL 63
G A TFN+L+ G+ G ++ E + + +P +YN ++ +L K
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+++ Y +S + + P TY ++ ++G+L++ RL +EM G P+ +NIL++
Sbjct: 878 LDFFYDLVSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
GK A L M G P + +T L+D L AG +D Y+F+E+ + G P
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D + Y +I + +E+A L++ M +G +P+++TYNS++ +AG ++A M
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+E++ G P+ YN L+ + A+ V ++M+ G
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T ++N LI EV K + F K P ++N +L A+ G + K+
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL-AVHG-KSGKIT 840
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +Y++M PD +TYNIV+ + + LD+ ++ S F P TY L+
Sbjct: 841 ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K + A+ L M + G P+ F L++G + G+ + F M N+G
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD+ YT+++ AG +++A F+ + + G P+ YN +I G + + +EA +
Sbjct: 961 PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM +RG P+ YN+L+ NL AG + +A + + G
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 41/278 (14%)
Query: 46 NSYNAILHALL---GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
++Y I AL G+RQ + V +M G+ + +YN ++ + G + +
Sbjct: 158 DTYLTIFKALSIRGGLRQ---MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEV 214
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
M G P TY+ L+ LGK + LL M+++G P+V FT + L R
Sbjct: 215 YRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGR 274
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-------------- 208
AG +D F M ++GC PD+V YTV+I + AG+LE A++LF
Sbjct: 275 AGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVI 334
Query: 209 ---------------------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
M G +P+V T+ ++ C A FDEA M
Sbjct: 335 YITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR 394
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN YNTL+ L AG++ +A +++ M G
Sbjct: 395 KQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 153/286 (53%), Gaps = 7/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++EN P TF IL+ C G V A+ V+ + + +P +YN+++
Sbjct: 169 ILENINPD-VYTFTILVDGFCKEGRVKEAKNVLAMMM---IQGIKPGVVTYNSLMDGYFL 224
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++Q + ++ M+ G +PDI +Y+I++ ++ +D+ LL EM P+ T
Sbjct: 225 VKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVT 284
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L K K AL L++ M + G P+++ +++++D L + +D +M
Sbjct: 285 YSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMK 344
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N+G P++ YT++I +G+LE A+ +F+ ++ KG NV+TY MI+GFC G FD
Sbjct: 345 NQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFD 404
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
EA T++ +ME GC PN Y ++ +L + A +++ M+E
Sbjct: 405 EALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 134/263 (50%), Gaps = 10/263 (3%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +N IL +L+ + Y + ++ Q+M G P+++ NI++ + +LG +
Sbjct: 57 NPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINSFCQLGHIPSA 116
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVL---GK-------GDKPLAALNLLNHMKEVGFDPS 149
+L ++ + G+ P+ T N L+ L GK K A++L N M +P
Sbjct: 117 FSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPD 176
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
V FT L+DG + G + K M +G P VV Y ++ Y ++ KA+ +F+
Sbjct: 177 VYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFN 236
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M G P++ +Y+ +I GFC DEA ++KEM + PN + Y++L+ L +G
Sbjct: 237 TMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSG 296
Query: 270 KLAEAHEVIRHMVEKGKYIHLVS 292
K++ A +++ M ++G+ ++V+
Sbjct: 297 KISYALKLVDEMHDRGQPPNIVT 319
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 138/289 (47%), Gaps = 24/289 (8%)
Query: 14 NILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL------------HALLGI 58
NILI C G + A V+ + +K ++P + N ++ H ++G
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILK---MGYKPNTITLNTLIKGLCLNGKIHDKHCIVG- 156
Query: 59 RQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
KL + V + +M E PD+ T+ I++ + G++ + +L M G P
Sbjct: 157 ---KLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVV 213
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ + A ++ N M ++G P + ++ L++G + +D EM
Sbjct: 214 TYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+K +P+VV Y+ +I +G++ A L D M +GQ PN+ TY+S++ C +
Sbjct: 274 HHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQV 333
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A ++ +M+++G PN Y L+ L +GKL +A +V ++ KG
Sbjct: 334 DNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKG 382
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 121/269 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N L+ V K F P SY+ +++ I+
Sbjct: 203 MMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKM 262
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M + P+++TY+ ++ + GK+ +L+DEM G P+ TY+
Sbjct: 263 MDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSS 322
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L L K + A+ LL MK G P++ +T L+ GL ++G L+ + F+++ KG
Sbjct: 323 ILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKG 382
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+V YTVMI + G ++A L M G +PN TY +I + + A
Sbjct: 383 HNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAE 442
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
++ EM + + N L++++ G
Sbjct: 443 KLLCEMIETNFDGRVALTNDLIASIWVTG 471
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 10/162 (6%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L N + + P + F ++ L ++ + Y +M +G P++V ++I
Sbjct: 46 AVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 105
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM----------AGKFDEACTMM 243
S+ G + A + ++ G PN T N++I+G C+ GK +A +
Sbjct: 106 SFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLF 165
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M NP+ + LV G++ EA V+ M+ +G
Sbjct: 166 NKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQG 207
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 50/114 (43%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
++D F+ + + P + + ++ S + + L M +G PN+ N
Sbjct: 42 DVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 101
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+I FC G A +++ ++ G PN + NTL+ L GK+ + H ++
Sbjct: 102 ILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIV 155
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/93 (19%), Positives = 44/93 (47%)
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
T++ +++ A LF+ ++ + P +N ++ + + + ++ME RG
Sbjct: 35 TTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIK 94
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + N L+++ G + A V+ +++ G
Sbjct: 95 PNLVNCNILINSFCQLGHIPSAFSVLTKILKMG 127
>gi|224134837|ref|XP_002321917.1| predicted protein [Populus trichocarpa]
gi|222868913|gb|EEF06044.1| predicted protein [Populus trichocarpa]
Length = 271
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 65/90 (72%), Positives = 78/90 (86%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E GF TTA+TFNILICTCGE GLA VVERFI+SK FNFRP+KNSYNAILH+LL + Q
Sbjct: 182 MVEKGFHTTAQTFNILICTCGEAGLAMNVVERFIRSKTFNFRPYKNSYNAILHSLLVLHQ 241
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
YKLIEWVYQ M +E ++PD+LTYN+++ AK
Sbjct: 242 YKLIEWVYQHMLEERHSPDVLTYNVILYAK 271
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 55/149 (36%), Gaps = 10/149 (6%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQ--MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
N N A LG +K W QQ G + +L C ++R +L
Sbjct: 128 NEENKTRCAKLG---FKFFMWSDQQGNYKHTGNSYHLLMKIFAECEEFR-----AMWKLA 179
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
DEM GF T+NIL+ G+ + + K F P + ++ L
Sbjct: 180 DEMVEKGFHTTAQTFNILICTCGEAGLAMNVVERFIRSKTFNFRPYKNSYNAILHSLLVL 239
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMI 192
++ + M + PDV+ Y V++
Sbjct: 240 HQYKLIEWVYQHMLEERHSPDVLTYNVIL 268
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 144/298 (48%), Gaps = 13/298 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHA 54
M + G A+T+ ILI C + GLA K+ E+ K +F +Y I+ A
Sbjct: 1042 MTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVF-------TYGMIIDA 1094
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L ++ +M G PD++ Y+ +M R G+L + EM G S D
Sbjct: 1095 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 1154
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TYN L+H L + LN M + GF P FT L+DGL + G + + +
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M +KG PD++ Y ++ G+LE A LF+ + +G NVF+YN +I G+C
Sbjct: 1215 LMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQ 1274
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
K DEA +EM +G P+ + YNTL+ L +G++ A ++ M G+++ L +
Sbjct: 1275 KIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLST 1332
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 144/284 (50%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF A TF ILI C G+VG A++++E ++ K P +YN +++ L
Sbjct: 1181 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE-LMRHK--GKEPDILTYNTLMNGLCL 1237
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q + +++ ++D G ++ +YNI++ + K+D+ R +EM G P T
Sbjct: 1238 VGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + + A L M+ G + + L+DGL + G+L+ F +
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P++ +++++ AG+LE+A FD + G P+ YN +I G C G
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EA ++ +ME +GC P+ + +N ++ NL ++ EA +++ M
Sbjct: 1418 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEM 1461
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 135/315 (42%), Gaps = 34/315 (10%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN L+ + ++G V + K +P + N ++H +R V+
Sbjct: 948 TFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGF 1007
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK- 130
G+ PD +T ++ + + +L DEM + G D TY IL++ L K K
Sbjct: 1008 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKT 1067
Query: 131 ---------------------------------PLAALNLLNHMKEVGFDPSVLHFTTLM 157
AL++ + M G P V+ +++LM
Sbjct: 1068 GLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 1127
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
DGL R G L FF EM +G DV Y +I AG ++ + M+ +G
Sbjct: 1128 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 1187
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+ FT+ +I G C GK EA +++ M +G P+ L YNTL++ L G+L +A ++
Sbjct: 1188 PDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKL 1247
Query: 278 IRHMVEKGKYIHLVS 292
+ ++G +++ S
Sbjct: 1248 FESLADRGIKLNVFS 1262
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ ++I + G+ + ++ F + P Y++++ L + K +++M
Sbjct: 1087 TYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 1146
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G + D+ TYN ++ R G + L+ M GFSPD T+ IL+ L K K
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 1206
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L M+ G +P +L + TLM+GL G L+ F+ +A++G +V Y ++
Sbjct: 1207 GEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 1266
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I Y ++++A F+ M KG P+ TYN++I C +G+ A + EM++ G
Sbjct: 1267 INGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 1326
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y L+ L G L EA ++ + +
Sbjct: 1327 FLKLSTYCVLLDGLCKNGHLEEAMDLFQSI 1356
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 151/280 (53%), Gaps = 6/280 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G T+ +LI CT G++ A +E F+K K + +P + +Y +L
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDA---MELFVKMKASSHKPDRVTYITMLDKFSD 346
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + +M +GYAPD++T+ I++ A + G +D+ LLD M + G P+ HT
Sbjct: 347 CGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHT 406
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + ++ AL+L N+M+ +G P+ + +D ++G D F++M
Sbjct: 407 YNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMK 466
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P++V + S G L +A+ +F+ + + G P+ TYN M++ + AG+ D
Sbjct: 467 IRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVD 526
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
EA ++ +M C P+ +V N+L++ L AG++ EA ++
Sbjct: 527 EAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKM 566
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 144/292 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E GF A ++N LI + GL R+ +E + + L +P +++A++ A R
Sbjct: 185 MREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRD 244
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ + ++M G P+I TY I + R G++D+ R++ M G PD TY +
Sbjct: 245 TETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTV 304
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A+ L MK P + + T++D S G+L K F+ EM G
Sbjct: 305 LIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ +T+++ + AG +++A L D M +G LPN+ TYN++I G + D+A
Sbjct: 365 YAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDAL 424
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ ME+ G P Y + +G+ +A E M +G ++V+
Sbjct: 425 DLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVA 476
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 148/301 (49%), Gaps = 37/301 (12%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C + +A+ V RF K +P SYN ++ LG+ ++ ++ +M + G
Sbjct: 763 VLCKHKQALVAQSVFIRFTKE--LGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG 820
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
APD+ TYN+++ A + GK+++ L ++M S P+ T+NI++ L K + AL
Sbjct: 821 CAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKAL 880
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+L + F P+ + L+DGL ++G L+ K F+EM + GC P+ Y ++I +
Sbjct: 881 DLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGF 940
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD------------------ 237
G++ A +LF M+ +G P++ +Y S++ C AG+ D
Sbjct: 941 GKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDS 1000
Query: 238 -----------------EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
EA T+ EM+SRG NP+ YN+L+ NL AG + +A ++
Sbjct: 1001 IAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEE 1060
Query: 281 M 281
+
Sbjct: 1061 L 1061
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 122/243 (50%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T NI+I + K ++ F +F P +Y +L LL + + + ++++M
Sbjct: 862 THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G P+ YNI++ + G ++ L M R G PD +Y L+ L + +
Sbjct: 922 VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL+ +K+ G + + ++DGL R+ ++ +DEM ++G PD+ Y +
Sbjct: 982 DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + AG +E+A L++ + G PNVFTYN++IRG+ M+G D A + K M GC
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101
Query: 252 NPN 254
+PN
Sbjct: 1102 SPN 1104
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KLIEWVYQQ 70
T+N+L+ G+ G ++ E + + + +P ++N I+ L+ K ++ Y
Sbjct: 827 TYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL 886
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+S + ++P TY ++ + G+L++ L +EM G P+ YNIL++ GK
Sbjct: 887 VSGD-FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M G P + +T+L+ L AG +D ++F+++ G D + Y +
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI + +E+A L+D M ++G P++FTYNS+I +AG ++A + +E++ G
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YN L+ +G A+ V + M+ G
Sbjct: 1066 LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGG 1100
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 139/285 (48%), Gaps = 2/285 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA T+ + I G+ G + K +E F K K+ P + NA L++L + + +
Sbjct: 434 GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA 493
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ ++ G APD +TYN++M + G++D+ LL +M + PD N L++
Sbjct: 494 KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINT 553
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + A + +K++ P+V+ + TL+ GL + G + F M GC P+
Sbjct: 554 LYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPN 613
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + ++ E++ A + M T +P+V T+N++I G + + +A +
Sbjct: 614 TITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFH 673
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK-GKYI 288
+M+ + P+ + TL+ + G + +A ++ V + G Y+
Sbjct: 674 QMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYV 717
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 134/318 (42%), Gaps = 35/318 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + +TF+ L+ G+ V + + +P +Y + L +
Sbjct: 220 MVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGR 279
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL----------------- 103
+ ++M D+G PD++TY +++ A GKLD L
Sbjct: 280 IDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYIT 339
Query: 104 ------------------DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
EM G++PD T+ IL++ L K A +LL+ M++ G
Sbjct: 340 MLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQG 399
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P++ + TL+ GL R LD F+ M G +P Y + I Y +G +KA
Sbjct: 400 VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKAL 459
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ F+ M +G PN+ N+ + G+ EA + ++S G P+ + YN ++
Sbjct: 460 ETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCY 519
Query: 266 RNAGKLAEAHEVIRHMVE 283
AG++ EA E++ M E
Sbjct: 520 SKAGQVDEAIELLSDMSE 537
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 118/263 (44%), Gaps = 12/263 (4%)
Query: 46 NSYNAILHALL---GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
N+Y I L G+RQ + + +M + G+ + +YN ++ + G + +
Sbjct: 160 NTYLIIFKGLFIRGGLRQ---TPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEM 216
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
M G P T++ L+ GK +LL M+ +G P++ +T + L R
Sbjct: 217 YRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGR 276
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG +D M + GC PDVV YTV+I + AG+L+ A +LF M P+ T
Sbjct: 277 AGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVT 336
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +M+ F G EME+ G P+ + + LV+ L AG + EA ++ M
Sbjct: 337 YITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMR 396
Query: 283 EKG------KYIHLVSKFKRYKR 299
++G Y L+S R R
Sbjct: 397 KQGVLPNLHTYNTLISGLLRVNR 419
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G+ TF IL+ C G + A +++ K + P ++YN ++ LL
Sbjct: 360 MEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVL---PNLHTYNTLISGLLR 416
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ M G P TY + + + G+ D+ ++M G +P+
Sbjct: 417 VNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVA 476
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L+ L + + A + N +K G P + + +M S+AG +D +M+
Sbjct: 477 CNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS 536
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C PD++ +I + AG +++A +F + P V TYN++I G G+
Sbjct: 537 ENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQ 596
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
A + M GC PN + +NT++ L
Sbjct: 597 RAMELFASMTGNGCPPNTITFNTILDCL 624
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ M ++ D+ TY I+ + G L Q +M +GF + ++YN L+H+L
Sbjct: 146 VFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLL 205
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL + M G PS+ F+ LM + + + K +EM + G P++
Sbjct: 206 QSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIY 265
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT+ I AG +++A + M G P+V TY +I C AGK D+A + +M
Sbjct: 266 TYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKM 325
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ P+ + Y T++ + G L E M G
Sbjct: 326 KASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADG 364
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 101/226 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ F T T+ L+ + G + E F + + RP YN +++
Sbjct: 886 LVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGD 945
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++++M EG PD+ +Y ++ G++D +++ ++G D YN+
Sbjct: 946 VNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNL 1005
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ LG+ + AL L + M+ G +P + + +L+ L AG ++ ++E+ G
Sbjct: 1006 MIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIG 1065
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
P+V Y +I Y +G + A ++ M+ G PN T+ +
Sbjct: 1066 LEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 125/319 (39%), Gaps = 38/319 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M EN N LI T + G + + F + K P +YN ++ L Q
Sbjct: 535 MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQ 594
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ M+ G P+ +T+N ++ + ++D ++L +M PD T+N
Sbjct: 595 VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANK 179
++H L + A+ L + MK++ P + TL+ G+ + G + DA K D +
Sbjct: 655 IIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRL 713
Query: 180 GCMPDVVCYTVMITSYIAAGELEK-----------------------------------A 204
G D + ++ + EK A
Sbjct: 714 GVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVA 773
Query: 205 QDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
Q +F + G P + +YN +I GF + A + EM++ GC P+ YN L+
Sbjct: 774 QSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLD 833
Query: 264 NLRNAGKLAEAHEVIRHMV 282
+GK+ E E+ M+
Sbjct: 834 AHGKSGKINELFELYEQMI 852
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 134/253 (52%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +Y ++ AL + + + M + G AP+++TYN ++ +LG +D+
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L ++M + SPD TYNIL+ K ++P LL M + G +P+ + + TLMD
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L ++G M + C P + +MI + G+L+ A +LF M +G LP+
Sbjct: 351 LVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPD 410
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
++TYN MI G C A + D+A +++ M GC P+ + YN++VS L A ++ EA+EV
Sbjct: 411 IYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYE 470
Query: 280 HMVEKGKYIHLVS 292
+ G ++ +V+
Sbjct: 471 VLRNGGYFLDVVT 483
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 155/308 (50%), Gaps = 12/308 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF---NFRPFKNSYNAILHALLG 57
M++ G T+N L+ + + G K ++ F +++ + +P ++N ++
Sbjct: 332 MVKYGCEPNFITYNTLMDSLVKSG---KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 388
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q L ++Q M+D G PDI TYNI++ R ++D +LL+ M +G PD T
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K + A + ++ G+ V+ +TL+DGL ++ LD + EM
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDVV YT++I + A +L+K+ F M+ KG +P V TY+ +I C + +
Sbjct: 509 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 568
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+ C ++K M RG P+ +VY +++ L + EA+E+ + M + G Y LV
Sbjct: 569 DGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLV 628
Query: 292 SKFKRYKR 299
K + R
Sbjct: 629 DKLCKVSR 636
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 149/323 (46%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+NI+I C + AR+++ER ++ P +YN+I+ L
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEA---GCPPDVVTYNSIVSGLCK 458
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q VY+ + + GY D++T + ++ + +LD +LL EM R+G +PD
Sbjct: 459 ASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVA 518
Query: 118 YNILLHVLGKGD---KPLAALN--------------------------------LLNHMK 142
Y IL+H K D K LA + LL M
Sbjct: 519 YTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTML 578
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G P + +T+++DGL ++ + D + M GC P VV Y V++ L+
Sbjct: 579 ERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLD 638
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L + M + G LP+ TYNS+ GF + + D+A + + M+SRGC+P +Y+ L+
Sbjct: 639 EAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLL 698
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L K+ +A E+ +E G
Sbjct: 699 TKLVAEEKMDQAMEIWEEALEAG 721
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 142/295 (48%), Gaps = 7/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N P+ T+ IL+ C + A ++E I++ P +YN +++
Sbjct: 228 MQRNCAPSVI-TYTILVDALCKSARISDASLILEDMIEA---GCAPNVVTYNTLINGFCK 283
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ QM + +PD+ TYNI++ + + +LL EM + G P+F T
Sbjct: 284 LGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFIT 343
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K K + A NL M PS F ++D + G LD F M
Sbjct: 344 YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMT 403
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++GC+PD+ Y +MI+ A ++ A+ L + M G P+V TYNS++ G C A + D
Sbjct: 404 DRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVD 463
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + + + + G + + +TL+ L + +L +A +++R M G +V+
Sbjct: 464 EAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVA 518
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P YN I+ L + Y+ M AP ++TY I++ A + ++ +
Sbjct: 200 PHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RNCAPSVITYTILVDALCKSARISDASLI 258
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L++M +G +P+ TYN L++ K A+ L N M E P V + L+DG +
Sbjct: 259 LEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK 318
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
EM GC P+ + Y ++ S + +G+ A +L M+ + P+ FT
Sbjct: 319 QERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFT 378
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N MI FC G+ D A + + M RGC P+ YN ++S A ++ +A +++ M
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 283 EKG 285
E G
Sbjct: 439 EAG 441
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 113/260 (43%), Gaps = 37/260 (14%)
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K +W Q GY T N ++ A R K + + L SPD TY
Sbjct: 114 KAVKFFDWCTGQ---PGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITY 170
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGF-------------------------------- 146
+ L++ K A LL+ M++ G
Sbjct: 171 STLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR 230
Query: 147 --DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
PSV+ +T L+D L ++ + ++M GC P+VV Y +I + G +++A
Sbjct: 231 NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEA 290
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
LF+ M+ P+VFTYN +I G+C + + +++EM GC PNF+ YNTL+ +
Sbjct: 291 VVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDS 350
Query: 265 LRNAGKLAEAHEVIRHMVEK 284
L +GK +A + + M+ +
Sbjct: 351 LVKSGKYIDAFNLAQMMLRR 370
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y ++H Q + +M D+G P ++TY+IV+ + ++ L
Sbjct: 514 PDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCML 573
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M G +PD Y ++ L K D A L MK+ G P+V+ + L+D L +
Sbjct: 574 LKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCK 633
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
LD + + M + GC+PD V Y + + + E +KA LF M ++G P F
Sbjct: 634 VSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFM 693
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
Y+ ++ K D+A + +E G + + + TL N R
Sbjct: 694 YSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTLQQNKR 737
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD + Y+ +I + A + ++A L D M +G +P+ YN++I+G C G+ D A
Sbjct: 163 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 222
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++M+ R C P+ + Y LV L + ++++A ++ M+E G ++V+
Sbjct: 223 VHYRDMQ-RNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVT 273
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 160 LSRAGNLDACKYFFDEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + +LD FFD + G ++++++ + ++A DLF P
Sbjct: 106 LQQLDDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSP 165
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ TY+++I GFC A F +A ++ EME RG P+ VYNT++ L + G++ A
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 225
Query: 279 RHM 281
R M
Sbjct: 226 RDM 228
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Query: 200 ELEKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
+L+KA FD + G + FT N ++ F K EA + K C+P+ + Y
Sbjct: 111 DLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITY 170
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+TL++ A +A+ ++ M ++G H
Sbjct: 171 STLINGFCKARDFQQAYRLLDEMEKRGIVPH 201
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 142/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+EN + TFN+LI C + A KV E L +P +YN++++ L
Sbjct: 294 MVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGL---KPTVVTYNSLVNGLCN 350
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M P+++TYN ++ + L++ L D +G+ G +P+ T
Sbjct: 351 EGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVIT 410
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LLH K K A L M E GF P+ + L+ G R G ++ K +EM
Sbjct: 411 FNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQ 470
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G D V Y ++I+++ E +KA L D M+ KG P+ TYN ++ G+CM G
Sbjct: 471 CRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLR 530
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + K+ME G N + YN L+ GKL +A+ ++ M+EKG
Sbjct: 531 AALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKG 578
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 140/259 (54%), Gaps = 3/259 (1%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
+E F ++ + ++ S N +L AL+ ++ +E+VY++M +P+++T+N V+
Sbjct: 180 LEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVING 239
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGF 146
++GKL++ ++D+M GF P+ TYN L+ +G+ K A +L M E
Sbjct: 240 LCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKV 299
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
P+ + F L+DG + NL A F+EM ++G P VV Y ++ G+L +A+
Sbjct: 300 SPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKV 359
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
L D M++ PNV TYN++I G+C +EA + + +G PN + +NTL+
Sbjct: 360 LLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYC 419
Query: 267 NAGKLAEAHEVIRHMVEKG 285
GK+ EA + + M+EKG
Sbjct: 420 KFGKMEEAFLLQKVMLEKG 438
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 137/267 (51%), Gaps = 6/267 (2%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
E G V + I+ K+ P ++N +++ L + + V M G+ P+++
Sbjct: 210 EFGGVEFVYKEMIRRKI---SPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVV 266
Query: 82 TYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
TYN ++ C R+GK+ + +L EM + SP+ T+N+L+ K + AAL +
Sbjct: 267 TYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVF 326
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M+ G P+V+ + +L++GL G L+ K DEM + P+V+ Y +I Y
Sbjct: 327 EEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKK 386
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
LE+A++LFD + +G PNV T+N+++ G+C GK +EA + K M +G PN Y
Sbjct: 387 KLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTY 446
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N L+ GK+ E ++ M +G
Sbjct: 447 NCLIVGFCREGKMEEVKNLLNEMQCRG 473
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%)
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V + N ++ +F + KEM R +PN + +NT+++ L GKL +A +V+
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253
Query: 279 RHMVEKGKYIHLVS 292
M G + ++V+
Sbjct: 254 DDMKVWGFWPNVVT 267
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 131/242 (54%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y I+ L ++ ++M+ G PD YN V+ + K+++ L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++M + +P+ TYN L++ L K + A L M G+ P+ + + TL+DG +
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+L A K FD+M C+P+VV YT +I +G+++ A ++ DGM+ KG PNV T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+ +I GFC + DEA ++++M ++G P + YN L+++L A KL +A ++ R M
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246
Query: 283 EK 284
++
Sbjct: 247 QR 248
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G A +N ++ C +V AR + E+ +K ++ P +YN +++ L
Sbjct: 35 MATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI---NPNVVTYNTLINGLCK 91
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++++M+ +GY P ++YN ++ + L + D+M RS P+ T
Sbjct: 92 AWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVT 151
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K K AA +L+ M + G P+V ++ L+DG + +D ++M
Sbjct: 152 YTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMV 211
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P VV Y +++ S A +LE A LF GM + P V TYN+++R C + D
Sbjct: 212 TQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLD 271
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + EM ++GC P+ + Y+TL L AGK+ EA E++ M
Sbjct: 272 GAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 29 VVERFIKSKLFN-------------FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
+VER K+K + +P YN +L L + + ++++M +
Sbjct: 15 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 74
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
P+++TYN ++ + +++ + L EM G+ P +YN L+ K +AA
Sbjct: 75 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 134
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++ + M P+V+ +TTL+DGLS++G + A D M KG P+V Y+ +I +
Sbjct: 135 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 194
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+++A L + M+T+G P V TYN ++ C A K ++A + + M R C+P
Sbjct: 195 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 254
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNTL+ L + +L AH + M+ KG
Sbjct: 255 VTYNTLLRALCHHKQLDGAHRLYAEMIAKG 284
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 115/253 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ T+N LI + E F + + P + SYN ++ +
Sbjct: 70 MVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKD 129
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ +M P+++TY ++ + GK+ +LD M + G +P+ TY+
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + A LL M G P+V+ + L++ L RA L+ F MA +
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P VV Y ++ + +L+ A L+ MI KG P+ TY+++ G AGK EA
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309
Query: 241 TMMKEMESRGCNP 253
+M++M+ NP
Sbjct: 310 ELMEKMKLTKRNP 322
>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
Length = 796
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 158/358 (44%), Gaps = 76/358 (21%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P T+ I+I C V A V ++ I + RP +Y ++H L
Sbjct: 230 MTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV---RPNIVTYTCLIHGYLS 286
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I Q+K + + ++MS G PD TY +++ + GK + +L D M R G PD
Sbjct: 287 IGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSI 346
Query: 118 YNILLH-----------------VLGKGDKPL------------------AALNLLNHMK 142
Y I+LH ++G G P A+++ N M+
Sbjct: 347 YGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMR 406
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM------ITSYI 196
+ G P+V+++ TL+D L + G +D + F++M N+G P++V +T + I +
Sbjct: 407 QQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWE 466
Query: 197 AAGEL-----------------------------EKAQDLFDGMITKGQLPNVFTYNSMI 227
AGEL KAQ L D M G P++ +YN++I
Sbjct: 467 KAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALI 526
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG C+ GK DEA ++ M S G PN YNTL+ G++ +A+ V + M+ G
Sbjct: 527 RGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNG 584
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P ++N +I G K F+ P +Y ++ L + E
Sbjct: 201 PPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEG 260
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+QQM D+G P+I+TY ++ +G+ + R+L EM G PD TY +LL L
Sbjct: 261 VFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLC 320
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A L + M G P V + ++ G + G L F D M G P+
Sbjct: 321 KKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHY 380
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ ++ ++ + +A D+F+ M +G PNV Y ++I C G+ D+A +M
Sbjct: 381 IFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ G PN +V+ +LV L K +A E+ MV +G + ++V
Sbjct: 441 INEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVV 485
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 115/220 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +G +P+++ Y ++ A +LG++D ++M G +P+ + L++ L
Sbjct: 401 IFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLC 460
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK A L M G P+V+ F T+M L G + + D M G PD++
Sbjct: 461 TIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDII 520
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + G+ ++A L D M++ G PN TYN+++ G+C G+ D+A ++ +EM
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM 580
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
S G P + YNT++ L + +EA E+ +M+ GK
Sbjct: 581 LSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGK 620
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 138/323 (42%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNI+ C + + + ++ F K + P +Y ++ AL + +
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429
Query: 61 YKLIEWVYQQMSDEGYAPDILT-----------------------------------YNI 85
E + QM +EG AP+I+ +N
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMK 142
+MC G++ + RL+D M R G PD +YN L+ ++GK D+ A LL+ M
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDE---ASKLLDIML 546
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
VG P+ + TL+ G R G +D F EM + G P VV Y ++
Sbjct: 547 SVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFS 606
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A++L+ MIT G+ +++TYN ++ G DEA M + + S+ + + +N ++
Sbjct: 607 EAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMI 666
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L G+ +A + + G
Sbjct: 667 GALLKDGRKEDAMNLFATISANG 689
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 135/291 (46%), Gaps = 14/291 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
M+ G FN + +CT G V A+++++ + RP SYNA++ H L
Sbjct: 475 MVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER---VGTRPDIISYNALIRGHCL 531
Query: 56 LGI--RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+G KL++ M G P+ TYN ++ R G++D + + EM +G +P
Sbjct: 532 VGKTDEASKLLDI----MLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITP 587
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN +LH L K + A L +M G S+ + +++GLS+ +D F
Sbjct: 588 VVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMF 647
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ +K D++ + +MI + + G E A +LF + G +P+V TY +
Sbjct: 648 QSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEE 707
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G +E M EME GC PN L+ N LV L G ++ A + + EK
Sbjct: 708 GSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEK 758
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE--- 143
+C R+G + LL M G +P+ +YN LL ++ AL LL+ M +
Sbjct: 140 LCDAKRVG--EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQV 197
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P+++ + T+++G G +D F +M ++G P+VV YT++I A +++
Sbjct: 198 RSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDR 257
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+ +F MI KG PN+ TY +I G+ G++ E M+KEM + G P+ Y L+
Sbjct: 258 AEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLD 317
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L GK EA ++ M+ KG
Sbjct: 318 YLCKKGKCTEARKLFDSMIRKG 339
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 115/224 (51%), Gaps = 11/224 (4%)
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNILLH- 123
++MS+ G P++++YN ++ C + R + L+ H + D RS P+ +YN +++
Sbjct: 155 RRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRS-CPPNLVSYNTVING 213
Query: 124 --VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
G+ DK A NL M + G P+V+ +T ++DGL +A +D + F +M +KG
Sbjct: 214 FFTEGQVDK---AYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGV 270
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++V YT +I Y++ G+ ++ + M G P+ FTY ++ C GK EA
Sbjct: 271 RPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARK 330
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M +G P+ +Y ++ G L+E H + MV G
Sbjct: 331 LFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNG 374
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 11/192 (5%)
Query: 109 SGFSPDFHTYNILLHV---LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
S +PD TY+IL+ +G+ + AA L+ +K V+ L+ GL A
Sbjct: 88 SKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLI--LKTGWRVNDVVVVNRLLKGLCDAKR 145
Query: 166 L-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL----PNV 220
+ +A M+ GC P+VV Y ++ + E+A +L M+ GQ+ PN+
Sbjct: 146 VGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLH-MMADGQVRSCPPNL 204
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+YN++I GF G+ D+A + +M +G PN + Y ++ L A + A V +
Sbjct: 205 VSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQ 264
Query: 281 MVEKGKYIHLVS 292
M++KG ++V+
Sbjct: 265 MIDKGVRPNIVT 276
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 146/313 (46%), Gaps = 31/313 (9%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
GF + F +I +VGLA + VE F + K F P YN +L LLG + ++
Sbjct: 104 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 163
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG------------- 110
I VY+ M +G+ P++ TYN+++ A + K+D +LL EM G
Sbjct: 164 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVIS 223
Query: 111 -----------------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
F P YN L++ L K + L++ M E G P+V+ +
Sbjct: 224 SMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISY 283
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+TL++ LS +G ++ +M +GC P++ + ++ G A D+++ MI
Sbjct: 284 STLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIR 343
Query: 214 K-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G PNV YN++++GFC G D+A ++ ME GC+PN Y +L++ G L
Sbjct: 344 GFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLE 403
Query: 273 EAHEVIRHMVEKG 285
A + M+ G
Sbjct: 404 GAVYIWNKMLTSG 416
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 12/288 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G A ++ +I + EVG+ R++ ERF P + YNA+++ L
Sbjct: 206 MSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF--------EPVVSVYNALINGLCK 257
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R YK + +M ++G +P++++Y+ ++ G+++ LL +M + G P+ HT
Sbjct: 258 ERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHT 317
Query: 118 YNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ L+ AL++ N M + G P+V+ + TL+ G GN+D F M
Sbjct: 318 LSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHM 377
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P++ Y +I + G LE A +++ M+T G PNV Y SM+ C KF
Sbjct: 378 EEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKF 437
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA ++++ M C P+ +N + L +AG+L A +V R M ++
Sbjct: 438 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 485
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 128/274 (46%), Gaps = 9/274 (3%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
V LA + S LF P ++ ++ L Q ++++ QQM +G+
Sbjct: 55 VPLALHFFKSIANSNLFKHTPL--TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL 112
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+ V+ ++G ++ + + G P YN +L L ++ + MK
Sbjct: 113 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 172
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
GF+P+V + L+ L + +D K EM+NKGC P+ V YT +I+S G ++
Sbjct: 173 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVK 232
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ + L + P V YN++I G C + +M EM +G +PN + Y+TL+
Sbjct: 233 EGRQLAERF-----EPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLI 287
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKY--IHLVSKF 294
+ L N+G++ A ++ M+++G + IH +S
Sbjct: 288 NELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSL 321
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 134/292 (45%), Gaps = 10/292 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G +++ LI G++ LA ++ + +K P ++ ++++
Sbjct: 271 MVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKR---GCHPNIHTLSSLVKGCF- 326
Query: 58 IR--QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+R + ++ Q + G P+++ YN ++ G +D+ + M G SP+
Sbjct: 327 VRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNI 386
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L++ K A+ + N M G P+V+ +T++++ L R + +
Sbjct: 387 RTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEI 446
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAG 234
M+ + C P V + I AG L+ A+ +F M + + PN+ TYN ++ G A
Sbjct: 447 MSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKAN 506
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ +EA + +E+ RG + YNTL+ NAG A +++ M+ GK
Sbjct: 507 RIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGK 558
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F +P +YN ++ V+ M + G +P+I TY ++ + G L+
Sbjct: 345 FGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEG 404
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ ++M SG P+ Y ++ L + K A +L+ M + PSV F +
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 464
Query: 159 GLSRAGNLDACKYFFDEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
GL AG LD + F +M + C P++V Y ++ A +E+A L + +G
Sbjct: 465 GLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 524
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ TYN+++ G C AG A ++ +M G +P+ + N ++ GK A ++
Sbjct: 525 WSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM 584
Query: 278 I 278
+
Sbjct: 585 L 585
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y +++ AL ++K E + + MS E AP + T+N + G+LD ++ +M
Sbjct: 424 YTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 483
Query: 108 RS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ P+ TYN LL L K ++ A L + G + S + TL+ G AG
Sbjct: 484 QQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLP 543
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ---LPNVFTY 223
+M G PD + ++I +Y G+ E+A + D +++ G+ P+V +Y
Sbjct: 544 GIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLD-LVSCGRRKWRPDVISY 602
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
++I G C + ++ + + M S P
Sbjct: 603 TNVIWGLCRSNCREDGVILFERMISERIIP 632
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I NGF T+N + C G VG A KV++ ++ P +YN +++ L
Sbjct: 282 IANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKN 338
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q + + + QM + G PDI T+N ++ A +L++ L ++ G SPD +T+
Sbjct: 339 GQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTF 398
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P AL L MK G P + + TL+D L G L EM +
Sbjct: 399 NILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMES 458
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC V Y +I +E+A+++FD M +G N T+N++I G C + D+
Sbjct: 459 AGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDD 518
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ +M S G PN + YN+++++ G + +A ++++ M G + +V+
Sbjct: 519 ANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVT 572
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 130/249 (52%), Gaps = 2/249 (0%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
LF + YN +L+ L+ + KL+E VY +M + G PD++T+N +M A R ++
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVR 202
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+L+EM SG +PD T+ L+ + AAL + M E+G P+ + L+
Sbjct: 203 TAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLI 262
Query: 158 DGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+G + G + DA Y E+AN G PD + Y + G + A + D M+ +G
Sbjct: 263 NGYCKLGRVEDALGYIQQEIAN-GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH 321
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+VFTYN ++ C G+ +EA ++ +M RGC P+ +NTL+ L + +L EA +
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381
Query: 277 VIRHMVEKG 285
+ R + KG
Sbjct: 382 LARQVTLKG 390
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 145/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TFN L +C +V A ++E S + P + ++ ++ +
Sbjct: 176 MGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGV---APDETTFTTLMQGFVE 232
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K V +M + G +P +T N+++ +LG+++ + + +GF PD T
Sbjct: 233 EGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQIT 292
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L + AL +++ M + G DP V + +++ L + G L+ K ++M
Sbjct: 293 YNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV 352
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC+PD+ + +I + + LE+A DL + KG P+V+T+N +I C G
Sbjct: 353 ERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQ 412
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +EM+S GC P+ + YNTL+ NL + GKL +A ++++ M G
Sbjct: 413 LALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 149/288 (51%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+NI++ C C G++ A+ ++ + ++ P ++N ++ AL
Sbjct: 316 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCL---PDITTFNTLIVALCS 372
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Q++ +G +PD+ T+NI++ A ++G RL +EM SG +PD T
Sbjct: 373 GNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVT 432
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K AL+LL M+ G S + + T++DGL + ++ + FD+M
Sbjct: 433 YNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMD 492
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + + + +I ++ A L MI++G PN TYNS++ +C G
Sbjct: 493 LQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIK 552
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++ M + G + + Y TL++ L AG+ A +++R M KG
Sbjct: 553 KAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 600
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNF--RPFKNSYNAILHALLGI 58
M +G TF L+ E G + + +K+++ P K + N +++ +
Sbjct: 211 MSSSGVAPDETTFTTLMQGFVEEGSIKAALR--VKARMLEMGCSPTKVTVNVLINGYCKL 268
Query: 59 -RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + ++ Q++++ G+ PD +TYN + + G + +++D M + G PD T
Sbjct: 269 GRVEDALGYIQQEIAN-GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+++ L K + A +LN M E G P + F TL+ L L+ ++
Sbjct: 328 YNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVT 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PDV + ++I + G+ + A LF+ M + G P+ TYN++I C GK
Sbjct: 388 LKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLG 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++KEMES GC + + YNT++ L ++ EA EV M +G
Sbjct: 448 KALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQG 495
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 132/286 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G TFN LI + ++ + L P ++N +++AL +
Sbjct: 351 MVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGD 410
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+L ++++M G PD +TYN ++ LGKL + LL EM +G TYN
Sbjct: 411 PQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNT 470
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + A + + M G + + F TL+DGL + +D +M ++G
Sbjct: 471 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + Y ++T Y G+++KA D+ M G +V TY ++I G C AG+ A
Sbjct: 531 LQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVAL 590
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+++ M +G YN ++ +L +A + R M E G+
Sbjct: 591 KLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGE 636
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 11/275 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALL 56
M +G T+N LI C+ G++G A +++ + P +YN I+ L
Sbjct: 421 MKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGC----PRSTVTYNTIIDGLC 476
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + E V+ QM +G + + +T+N ++ + ++D ++L+ +M G P+
Sbjct: 477 KKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNI 536
Query: 117 TYN-ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN IL H +GD AA ++L M GF+ V+ + TL++GL +AG
Sbjct: 537 TYNSILTHYCKQGDIKKAA-DILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRG 595
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG- 234
M KG Y +I S A +LF M G+ P+ FTY + RG C G
Sbjct: 596 MRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGG 655
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
EA + EM +G P F + L L N G
Sbjct: 656 SIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 9/277 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C GE+ A V++R + P +YN IL +L + K V
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM------SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M PD++TY I++ A R + Q +LLDEM G +PD TYN+L++ + K
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ LN M G P+V+ ++ + G + +M KG P VV +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I G L +A D+ + M G PN +YN ++ GFC K D A ++ M S
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RGC P+ + YNT+++ L GK+ +A E++ + KG
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 147/276 (53%), Gaps = 6/276 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N ++ C G++ A +V++R ++ + P +Y ++ A +
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCY---PDVITYTILIEATCRDSGVGQAMKLL 262
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M D G PD++TYN+++ + G+LD+ + L++M SG P+ T+NI+L +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + A LL M GF PSV+ F L++ L R G L ++M GC P+ + Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY 382
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + ++++A + + M+++G P++ TYN+M+ C GK ++A ++ ++ S
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+GC+P + YNT++ L AGK +A +++ M K
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 6/275 (2%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G+ A K++E S P +YN ++ + V +MS +
Sbjct: 148 CRMGKTRKAAKILEVLEGSGAV---PDVITYNVMISGYCKAGEINNALSVLDRMS---VS 201
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++TYN ++ + GKL Q +LD M + PD TY IL+ + A+ L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKL 261
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M++ G P V+ + L++G+ + G LD F ++M + GC P+V+ + +++ S +
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G A+ L M+ KG P+V T+N +I C G A ++++M GC PN L
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLS 381
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L+ K+ A E + MV +G Y +V+
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 142/268 (52%), Gaps = 10/268 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV- 67
T+ ILI C VG A K+++ + P +YN +++ + ++ +L E +
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEM---RDRGCTPDVVTYNVLVNGI--CKEGRLDEAIK 295
Query: 68 -YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
M G P+++T+NI++ + G+ +LL +M R GFSP T+NIL++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+++L M + G P+ L + L+ G + +D + + M ++GC PD+V
Sbjct: 356 RKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y M+T+ G++E A ++ + + +KG P + TYN++I G AGK +A ++ EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
++ P+ + Y++LV L GK+ EA
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 113/217 (52%), Gaps = 3/217 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PDI+ ++ R+GK + ++L+ + SG PD TYN+++ K
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKA 185
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL++L+ M P V+ + T++ L +G L D M + C PDV+ Y
Sbjct: 186 GEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + + +A L D M +G P+V TYN ++ G C G+ DEA + +M S
Sbjct: 243 TILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + +N ++ ++ + G+ +A +++ M+ KG
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N+L IC G + A K + S +P ++N IL ++
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS---GCQPNVITHNIILRSMCS 321
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E + M +G++P ++T+NI++ R G L + +L++M + G P+ +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLS 381
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LLH K K A+ L M G P ++ + T++ L + G ++ ++++
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC P ++ Y +I AG+ KA L D M K P+ TY+S++ G GK D
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA E E G PN + +N+++ L + A + + +M+ +G
Sbjct: 502 EAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRG 549
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 16/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M +G T NI++ C+ G A K++ ++ F P ++N +++
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK---GFSPSVVTFNILINFLCR 356
Query: 54 -ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
LLG R ++E +M G P+ L+YN ++ + K+D+ L+ M G
Sbjct: 357 KGLLG-RAIDILE----KMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
PD TYN +L L K K A+ +LN + G P ++ + T++DGL++AG
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
DEM K PD + Y+ ++ G++++A F G PN T+NS++ G C
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCK 531
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ D A + M +RGC P Y L+ L G EA E++ + KG
Sbjct: 532 TRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 16/192 (8%)
Query: 96 LDQFHR------LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+ QFHR LD GR+ + + + + + L ++ + ++ G +
Sbjct: 17 IQQFHRECKRGNKLDVSGRT-----TRSISSKVPLWSRKRNRLVLVSAASQVESSGLNGR 71
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
F TL G S N + +F AN + + V + + GELE+ +
Sbjct: 72 AQKFDTLASGHS---NSNGNGHF--SSANSSFVLEDVESNNHLRQLVRTGELEEGFKFLE 126
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M+ G +P++ ++IRGFC GK +A +++ +E G P+ + YN ++S AG
Sbjct: 127 NMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAG 186
Query: 270 KLAEAHEVIRHM 281
++ A V+ M
Sbjct: 187 EINNALSVLDRM 198
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 96/255 (37%), Gaps = 76/255 (29%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ GF + TFNILI C G +G A ++E+ K +P SYN +LH
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPK---HGCQPNSLSYNPLLHGFCK 391
Query: 58 IRQY-KLIEW----------------------------------VYQQMSDEGYAPDILT 82
++ + IE+ + Q+S +G +P ++T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN V+ + GK + +LLDEM PD TY+ L+ L + K A+ + +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLD------------ACK-------------------- 170
+G P+ + F ++M GL + D CK
Sbjct: 512 RMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAK 571
Query: 171 ---YFFDEMANKGCM 182
+E+ NKG M
Sbjct: 572 EALELLNELCNKGLM 586
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/266 (30%), Positives = 139/266 (52%), Gaps = 7/266 (2%)
Query: 34 IKSKLFNFR-------PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV 86
+ S L ++R P +Y ++ AL + + + M + G AP+++TYN +
Sbjct: 84 VDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTL 143
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+ +LG +D+ L ++M + SPD TYNIL+ K ++P LL M + G
Sbjct: 144 INGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGC 203
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
+P+ + + TLMD L ++G M + C P + +MI + G+L+ A +
Sbjct: 204 EPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYE 263
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
LF M +G LP+++TYN MI G C A + D+A +++ M GC P+ + YN++VS L
Sbjct: 264 LFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLC 323
Query: 267 NAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ EA+EV + G ++ +V+
Sbjct: 324 KASQVDEAYEVYEVLRNGGYFLDVVT 349
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+ C + A ++E I++ P +YN +++ + ++
Sbjct: 104 TYTILVDALCKSARISDASLILEDMIEA---GCAPNVVTYNTLINGFCKLGNMDEAVVLF 160
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM + +PD+ TYNI++ + + +LL EM + G P+F TYN L+ L K
Sbjct: 161 NQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKS 220
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K + A NL M PS F ++D + G LD F M ++GC+PD+ Y
Sbjct: 221 GKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTY 280
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+MI+ A ++ A+ L + M G P+V TYNS++ G C A + DEA + + + +
Sbjct: 281 NIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRN 340
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + + +TL+ L + +L +A +++R M G +V+
Sbjct: 341 GGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVA 384
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 6/253 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF---NFRPFKNSYNAILHALLG 57
M++ G T+N L+ + + G K ++ F +++ + +P ++N ++
Sbjct: 198 MVKYGCEPNFITYNTLMDSLVKSG---KYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCK 254
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q L ++Q M+D G PDI TYNI++ R ++D +LL+ M +G PD T
Sbjct: 255 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 314
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K + A + ++ G+ V+ +TL+DGL ++ LD + EM
Sbjct: 315 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 374
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDVV YT++I + A +L+K+ F M+ KG +P V TY+ +I C + +
Sbjct: 375 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 434
Query: 238 EACTMMKEMESRG 250
+ C ++K M RG
Sbjct: 435 DGCMLLKTMLERG 447
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD +TY+ ++ + Q +RLLDEM + G P YN ++ L + +AL
Sbjct: 30 SPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALV 89
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
M+ PSV+ +T L+D L ++ + ++M GC P+VV Y +I +
Sbjct: 90 HYRDMQR-HCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFC 148
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G +++A LF+ M+ P+VFTYN +I G+C + + +++EM GC PNF+
Sbjct: 149 KLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFI 208
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
YNTL+ +L +GK +A + + M+ +
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRR 236
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+EN T+NILI C K+++ +K + P +YN ++ +L+
Sbjct: 163 MLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVK---YGCEPNFITYNTLMDSLVK 219
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+Y + Q M P T+N+++ ++G+LD + L M G PD +T
Sbjct: 220 SGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYT 279
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI++ + ++ A LL M E G P V+ + +++ GL +A +D ++ +
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G DVV + +I + L+ A+ L M G P+V Y +I GFC A + D
Sbjct: 340 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLD 399
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM +GC P + Y+ ++ L + ++ + +++ M+E+G
Sbjct: 400 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 1/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P YN I+ L + Y+ M AP ++TY I++ A + ++ +
Sbjct: 66 PHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARISDASLI 124
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L++M +G +P+ TYN L++ K A+ L N M E P V + L+DG +
Sbjct: 125 LEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK 184
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
EM GC P+ + Y ++ S + +G+ A +L M+ + P+ FT
Sbjct: 185 QERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFT 244
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N MI FC G+ D A + + M RGC P+ YN ++S A ++ +A +++ M
Sbjct: 245 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 304
Query: 283 EKG 285
E G
Sbjct: 305 EAG 307
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD + Y+ +I + A + ++A L D M +G +P+ YN++I+G C G+ D A
Sbjct: 29 CSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL 88
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++M+ R C P+ + Y LV L + ++++A ++ M+E G ++V+
Sbjct: 89 VHYRDMQ-RHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVT 139
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%)
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++++++ + ++A DLF + P+ TY+++I GFC A F +A ++ EME RG
Sbjct: 4 LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ VYNT++ L + G++ A R M
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 94
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 146/292 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + GF A ++N LI + G + +E + + +P +Y+A++ AL R
Sbjct: 183 MRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRD 242
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++ + ++M D G P++ T+ I + R GK+D+ + + M G PD TY +
Sbjct: 243 SEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTV 302
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A L MK G P + + TL+D + G+LD K F+ +M G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MPDVV +T+++ A + ++A FD M +G LPN+ TYN++I G AG+ ++A
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ MES G P Y T + +G+ +A E M KG ++V+
Sbjct: 423 KLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVA 474
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 132/270 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +LI G E F+K K +P + Y +L + + QM
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQM 358
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+GY PD++T+ I++ + D+ D M + G P+ HTYN L+ L + +
Sbjct: 359 EADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRI 418
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL LL+ M+ VG P+ + T +D ++G F++M KG +P++V
Sbjct: 419 EDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNAS 478
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ S G L +A+ +F+G+ G P+ TYN M++ + G+ DEA ++ EM GC
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ +V N+L+ +L AG++ EA ++ M
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRM 568
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 135/261 (51%), Gaps = 4/261 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW-VYQQMSDEGYAPDILTYN 84
A ++ ++F K P SYN ++ LL + Y W +++ M + G APD T+N
Sbjct: 771 AYQIFDKFTKK--LGISPTLASYNCLIGELLEV-HYTEKAWDLFKDMKNVGCAPDAFTFN 827
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
+++ + GK+ + L EM PD TYNI++ L K + AL+ +
Sbjct: 828 MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
F P+ + L+DGL++ G L+ F+EM++ GC P+ + ++I Y G+ E A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
LF M+ +G P++ +Y ++ C+AG+ DEA E++S G +P+F+ YN +++
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L + ++ EA + M +G
Sbjct: 1008 LGKSQRMEEALALYNEMRNRG 1028
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 133/261 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI A T+NI+I + + K ++ F +FRP +Y ++ L + +
Sbjct: 849 MISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGR 908
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++++MSD G P+ +NI++ ++G + +L M G PD +Y I
Sbjct: 909 LEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTI 968
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + AL N +K G DP + + +++GL ++ ++ ++EM N+G
Sbjct: 969 LVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRG 1028
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD+ Y ++ + AG +E+A+ +++ + G P+VFTYN++IRG+ ++ + A
Sbjct: 1029 IVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAY 1088
Query: 241 TMMKEMESRGCNPNFLVYNTL 261
T+ K M GCNPN Y L
Sbjct: 1089 TVYKNMMVDGCNPNIGTYAQL 1109
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 139/283 (49%), Gaps = 1/283 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA T+ I G+ G K VE F K K P + NA L++L + + +
Sbjct: 432 GVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREA 491
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ + + G APD +TYN++M ++G++D+ LL EM R+G PD N L+
Sbjct: 492 KTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDS 551
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + A + + MK++ P+V+ + TL+ GL + G + F+ M K C P+
Sbjct: 552 LYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPN 611
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + ++ + E+E A +F M P+V TYN++I G K + A
Sbjct: 612 TISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFH 671
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+++ + +P+ + TL+ L G++ +A + R + + ++
Sbjct: 672 QLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRF 713
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 115/244 (47%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+ P ++ ++ L R + + M +G P++ TYN ++C R G+++
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+LLD M G P +TY + GK + A+ MK G P+++ + L
Sbjct: 423 KLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G L K F+ + G PD V Y +M+ Y G++++A +L MI G P+V
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
NS+I AG+ DEA M M+ +P + YNTL+S L G++ +A E+
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602
Query: 281 MVEK 284
M+ K
Sbjct: 603 MIXK 606
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 2/282 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KL 63
G A TFN+L+ G+ G ++ E + + +P +YN ++ +L K
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+++ Y +S + + P TY ++ ++G+L++ RL +EM G P+ +NIL++
Sbjct: 878 LDFFYDLVSSD-FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
GK A L M G P + +T L+D L AG +D Y+F+E+ + G P
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D + Y +I + +E+A L++ M +G +P+++TYNS++ +AG ++A M
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMY 1056
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+E++ G P+ YN L+ + A+ V ++M+ G
Sbjct: 1057 EELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDG 1098
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 133/283 (46%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T ++N LI EV K + F K P ++N +L A+ G + K+
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLL-AVHG-KSGKIT 840
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +Y++M PD +TYNIV+ + + LD+ ++ S F P TY L+
Sbjct: 841 ELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLI 900
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K + A+ L M + G P+ F L++G + G+ + F M N+G
Sbjct: 901 DGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIR 960
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD+ YT+++ AG +++A F+ + + G P+ YN +I G + + +EA +
Sbjct: 961 PDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALAL 1020
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM +RG P+ YN+L+ NL AG + +A + + G
Sbjct: 1021 YNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAG 1063
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 121/278 (43%), Gaps = 41/278 (14%)
Query: 46 NSYNAILHALL---GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
++Y I AL G+RQ + V +M G+ + +YN ++ + G + +
Sbjct: 158 DTYLTIFKALSIRGGLRQ---MTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEV 214
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
M G P TY+ L+ LGK + LL M+++G P+V FT + L R
Sbjct: 215 YRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGR 274
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-------------- 208
AG +D F M ++GC PD+V YTV+I + AG+LE A++LF
Sbjct: 275 AGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVI 334
Query: 209 ---------------------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
M G +P+V T+ ++ C A FDEA M
Sbjct: 335 YITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR 394
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN YNTL+ L AG++ +A +++ M G
Sbjct: 395 KQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 136/268 (50%), Gaps = 2/268 (0%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V A KV + + +P YNA++ + +M + G A
Sbjct: 119 CKVGRVDEAVKVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 176
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TYN+++ A + G+ + + L++EMG G +PD TYNIL++ K AL +
Sbjct: 177 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 236
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+M G +V+ +T+L+ LS+ G + FDE +G PD+V Y +I S+
Sbjct: 237 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 296
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+G +++A ++ M K P+ TYN+++RG C+ G+ DEA ++ EM RG P+ +
Sbjct: 297 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 356
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL+S G + +A + M+ KG
Sbjct: 357 YNTLISGYSMKGDVKDALRIRNEMMNKG 384
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 47 SYNAILHALL----GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
+YN ++HAL G Y+L+E +M +G APD+ TYNI++ + G + + +
Sbjct: 181 TYNLLVHALFMDGRGTEAYELVE----EMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 236
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M R G TY L++ L K + L + G P ++ + L++ S
Sbjct: 237 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 296
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+GN+D EM K PD V Y ++ G +++A+ L D M +G P++ T
Sbjct: 297 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 356
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+ M G +A + EM ++G NP L YN L+ L G+ +A +++ MV
Sbjct: 357 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 416
Query: 283 EKG------KYIHLV 291
E G YI L+
Sbjct: 417 ENGITPDDSTYISLI 431
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T T+N+L+ G + E + P +YN +++
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +++ MS G ++TY ++ A + G++ + +L DE R G PD YN
Sbjct: 230 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 289
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ A ++ M++ P + + TLM GL G +D + DEM +G
Sbjct: 290 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRG 349
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I+ Y G+++ A + + M+ KG P + TYN++I+G C G+ D+A
Sbjct: 350 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 409
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
M+KEM G P+ Y +L+ L
Sbjct: 410 NMVKEMVENGITPDDSTYISLIEGL 434
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
T+NI++ GK + LL +M R P+ TYN ++ + AAL+++ M
Sbjct: 43 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 98
Query: 142 KEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAG 199
+E G P+ + T++ G + G +D FDEM KG P+ V Y +I Y G
Sbjct: 99 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L+ A D M+ +G V TYN ++ M G+ EA +++EM +G P+ YN
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L++ G + +A E+ +M +G +V+
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI T G + A +++ K ++ P +YN ++ L + + +
Sbjct: 287 YNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDEARKLID 343
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M+ G PD++TYN ++ G + R+ +EM GF+P TYN L+ L K
Sbjct: 344 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 403
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ A N++ M E G P + +L++GL+
Sbjct: 404 QGDDAENMVKEMVENGITPDDSTYISLIEGLT 435
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L +C G V ARK+++ K +P +YN ++ K +
Sbjct: 321 TYNTLMRGLCLLGRVDEARKLIDEMTKR---GIQPDLVTYNTLISGYSMKGDVKDALRIR 377
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G+ P +LTYN ++ + G+ D ++ EM +G +PD TY L+ L
Sbjct: 378 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437
Query: 129 DK 130
D+
Sbjct: 438 DE 439
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 145/292 (49%), Gaps = 15/292 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE+G T+N ++ + + + F + + P + S+N I+ LG+ Q
Sbjct: 419 MIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII---LGLCQ 475
Query: 61 YKLIEWVYQQ------------MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
I+ Q+ M+D+G+ PD++TY+ ++ + ++D LL++M +
Sbjct: 476 QSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
P T N L+H L K + A +L+ M G P V+ + TL+ G RAG +
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ +M +G P+VV YT +++ A L +A +F M + G PN+FTY ++I
Sbjct: 596 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 655
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
GFC AG+ D + EM G +P+ +VY TL + L +G+ A A E++R
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 142/294 (48%), Gaps = 9/294 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G P + T+N++I + G+ + + K P +YN ++ L +
Sbjct: 384 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 443
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRL------GKLDQFHRLLDEMGRSGF 111
+ ++ +M G P+ ++N + +C + ++ GKLD+ RLL M G
Sbjct: 444 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD TY+ L+ L + A +LL M + P+V+ TL+ GL +AG + +
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 563
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
D M + G PDVV Y ++ + AG+ E+A++L M+ +G PNV TY +++ G C
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EAC + +M+S GC PN Y L+ +AG++ ++ MV G
Sbjct: 624 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAG 677
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 148/332 (44%), Gaps = 50/332 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E + ++ ILI G++ AR + ++ + S P +Y +++H L
Sbjct: 314 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS---GVTPSTVAYTSLIHGLCM 370
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M+ G P +TYN+++ A + G L++ L+ +M G PD T
Sbjct: 371 ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 430
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPS---------------------------- 149
YN ++ L K + AL L N M+ +G P+
Sbjct: 431 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDE 490
Query: 150 ----------------VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
V+ ++TL+ GL +D ++ ++M + C P VV +I
Sbjct: 491 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIH 550
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
AG +++A+++ D M++ GQ P+V TYN+++ G C AG+ + A ++ +M +RG P
Sbjct: 551 GLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAP 610
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y LVS L A +L EA V M G
Sbjct: 611 NVVTYTALVSGLCKANRLPEACGVFAQMKSSG 642
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 115/219 (52%), Gaps = 9/219 (4%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YNIV+ + ++D+ ++ ++M SPD +Y IL+ L K K A NL +
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G PS + +T+L+ GL A + D + F +M +GC P V Y VMI + G LE
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A DL MI G +P+V TYN+++ G C + + +EA + EME GC PN +NT++
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 263 ------SNLRNA---GKLAEAHEVIRHMVEKGKYIHLVS 292
S + A GKL EA +++ M + G +V+
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVT 509
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 9/291 (3%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
R +NI+I + + V+ F K N P SY ++ L + ++Q+
Sbjct: 289 RGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQK 348
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ G P + Y ++ D L +M R G P TYN+++ K
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGM 408
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV----- 185
A +L+ M E G P V+ + T+MDGL ++ ++ F+EM GC P+
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNT 468
Query: 186 ----VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+C I G+L++A L M G +P+V TY+++I G C + D+A
Sbjct: 469 IILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 528
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++M R C P + NTL+ L AG++ EA EV+ MV G+ +V+
Sbjct: 529 LLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVT 579
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 43/286 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G T++ LI C+ V AR ++E +K + +P + N ++H L
Sbjct: 498 MTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC---KPTVVTQNTLIHGLCK 554
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K V M G +PD++TYN ++ R G+ ++ LL +M G +P+ T
Sbjct: 555 AGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVT 614
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K ++ A + MK G P++ +T L+ G AG +D F EM
Sbjct: 615 YTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 674
Query: 178 NKGCMPDVVCYTVM-------------------------------------ITSYIAAGE 200
G PD V Y + + + AG+
Sbjct: 675 CAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGK 734
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+E A M+ GQLP S++ G C +G+ EA +++E+
Sbjct: 735 MEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEI 780
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 122/312 (39%), Gaps = 69/312 (22%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P+ + YN ++ +L ++ + ++ + Q M D G PD T+ ++C + GK+D+ +
Sbjct: 42 PYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELV 101
Query: 103 LDEMGRSGFSPDFHT-------------------------------YNILLHVLGKGDKP 131
+DEM P F T YNI++ L K +
Sbjct: 102 MDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARV 161
Query: 132 LAALNLLNHMKE--------------VGF------------------DPSVLHFTTLMDG 159
AL L M E VG +P ++ L++G
Sbjct: 162 DDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEG 221
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG------MIT 213
G +D + M ++ C PD V Y ++ AG +E+A LF +
Sbjct: 222 FCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSS 281
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
P++ YN +I G C + DEA M ++M R +P+ Y L+ L AGKL +
Sbjct: 282 SSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLND 341
Query: 274 AHEVIRHMVEKG 285
A + + ++ G
Sbjct: 342 ARNLFQKLLHSG 353
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M + G P+ L FT+++ G G +A K F PDV Y V+I S
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQ 58
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
E E + + M+ +G P+ FT+ +++ G C AGK DEA +M EM SR P F +
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 260 TLVSNLRNAGKLAEAHEVIRHM 281
L L G + A +++ M
Sbjct: 119 FLAHELCLRGSMERAFQLLEIM 140
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
SP YN+L+ L K + A ++ M + G P FTT++ GL +AG +D +
Sbjct: 41 SPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAEL 100
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
DEM ++ P + + G +E+A L + M + N YN ++ C
Sbjct: 101 VMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIM----PVANSSAYNIVVVALC 156
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
A + D+A + + M + ++++ L ++G++ EA +V R
Sbjct: 157 KAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205
>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 447
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 155/295 (52%), Gaps = 13/295 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF + LI ++G R ++ K +P Y+ I+ AL +
Sbjct: 154 LLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALC---K 210
Query: 61 YKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y+L+ Y +M+ +G + D++TYN ++ +GKL + LL+ M +PD +T
Sbjct: 211 YQLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYT 270
Query: 118 YNILLHVLGKGDKPLAA-------LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
Y IL+ L K K A +L++ M++ G V+ +++L+DGL + G+LD
Sbjct: 271 YTILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 330
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F++M ++G P++ +T+++ G L+ AQ++F ++TKG NV+TYN MI G
Sbjct: 331 ALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 390
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C G +EA TM+ +ME GC PN + T++ L + +A +++R M+ +G
Sbjct: 391 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 445
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 13/289 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T NILI C G++ V+ + +K + P + N ++ L Q K +
Sbjct: 95 TLNILINCFCHMGQITFGFSVLAKILKR---GYPPSTVTLNTLIKGLCLKGQVKKALHFH 151
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++ +G+ + + Y ++ ++G +LL ++ PD Y+ ++ L K
Sbjct: 152 DKLLAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKY 211
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A L + M G V+ + TL+ G G L + M K PDV Y
Sbjct: 212 QLVSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTY 271
Query: 189 TVMITSYIAAGELEKAQ-------DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
T+++ + G++++A+ DL D M +GQ +V TY+S+I G C G D A
Sbjct: 272 TILVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 331
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ +M+ +G PN + L+ L G+L +A EV + ++ KG ++++
Sbjct: 332 LFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNV 380
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 115/235 (48%), Gaps = 1/235 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+N IL + ++ Y + + ++ +G PD+ T NI++ +G++ +L ++
Sbjct: 61 QFNKILDSFAKMKHYSTVS-LSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKI 119
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G+ P T N L+ L + AL+ + + GF + + + TL++G+ + G+
Sbjct: 120 LKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVCKIGDT 179
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A ++ + PDVV Y+ +I + + +A LF M KG +V TYN++
Sbjct: 180 RAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYNTL 239
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
I GFC+ GK EA ++ M + NP+ Y LV L GK+ EA I ++
Sbjct: 240 IYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGKVKEAKRRISYV 294
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 98/224 (43%), Gaps = 7/224 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M G T+N LI C G+ +GL +V + I ++ + ++
Sbjct: 224 MTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALCKEGK 283
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
R+ + + +M D G D++TY+ ++ + G LD+ L ++M G P
Sbjct: 284 VKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRP 343
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+ ILL L KG + A + + G+ +V + +++G + G L+
Sbjct: 344 NMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTML 403
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+M + GC+P+ + +I + E +KA+ L MI +G L
Sbjct: 404 SKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 447
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 77/174 (44%), Gaps = 1/174 (0%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+P +N +L K K + ++L + ++ G P + L++ G +
Sbjct: 56 TPPIIQFNKILDSFAKM-KHYSTVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFS 114
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
++ +G P V +I G+++KA D ++ +G N Y ++I G C
Sbjct: 115 VLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVGYGTLINGVC 174
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G A ++K+++ R P+ ++Y+T++ L ++EA+ + M KG
Sbjct: 175 KIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYGLFSEMTVKG 228
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 137/239 (57%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S N +LH L + + + + QM+D G PD+++Y +V+ R+G+LD+ +L+DE+
Sbjct: 244 SCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL 303
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD + YN ++ +L K + + A LL M++ G P + +TT++ G + GN+
Sbjct: 304 KGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNV 363
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A FDEM K +PD+V YT +I +G++ +A+++F+ M+ KG P+ TY ++
Sbjct: 364 SAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTAL 423
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+C AG+ EA ++ +M +G PN + Y L L G++ A+E++ M KG
Sbjct: 424 IDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 135/267 (50%), Gaps = 3/267 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ K+V+ +K K +P + YN I+ L + E + + M G
Sbjct: 288 CRIGELDKVLKLVDE-LKGK--GLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y V+ +LG + +L DEM R PD TY ++H + K K + A +
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
N M G +P + +T L+DG +AG + ++M KG P+VV YT +
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GE++ A +L M KG PNV+TYN+++ G C G ++ +M+EM+ G P+ +
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEK 284
Y TL+ G++A+AHE++R M+ K
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNK 551
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
IC G++ AR++ + L P + +Y A++ + K V+ QM +G
Sbjct: 392 ICKSGKMVEAREMFNEMLVKGL---EPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGL 448
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+++TY + + G++D + LL EM R G P+ +TYN +++ L K +
Sbjct: 449 TPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVK 508
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M GF P + +TTLMD + G + M NK P +V + V++ +
Sbjct: 509 LMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFC 568
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G LE + L + M+ KG +PN T+NS+++ +C+ + K M RG P+
Sbjct: 569 MSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSN 628
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ A + EA + + MVEKG
Sbjct: 629 TYNILIKGHCKARNMKEAWFLHKEMVEKG 657
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 15 ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDE 74
+L+C GEV A +++ K +F P Y ++ + ++ +M +
Sbjct: 320 LLLCKNGEVVEAEQLLRGMRKWGVF---PDNVVYTTVISGFCKLGNVSAACKLFDEMRRK 376
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
PDI+TY V+ + GK+ + + +EM G PD TY L+ K + A
Sbjct: 377 KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEA 436
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
++ N M + G P+V+ +T L DGL + G +D EM+ KG P+V Y ++
Sbjct: 437 FSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNG 496
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G +E+ L + M G P+ TY +++ +C G+ +A +++ M ++ P
Sbjct: 497 LCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPT 556
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +N L++ +G L + +I M+EKG
Sbjct: 557 LVTFNVLMNGFCMSGMLEDGERLIEWMLEKG 587
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ LI C GE+ A V + ++ L P +Y A+ L
Sbjct: 408 MLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGL---TPNVVTYTALADGLCK 464
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +MS +G P++ TYN ++ ++G ++Q +L++EM +GF PD T
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K + A LL M P+++ F LM+G +G L+ + + M
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG MP+ + ++ Y + +++ M +G +P+ TYN +I+G C A
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + KEM +G + Y+ L+ K EA ++ M + G
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHG 692
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 18/271 (6%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ L +C GE+ +A +++ + L +P +YN I++ L
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGL---QPNVYTYNTIVNGLCK 499
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++M G+ PD +TY +M A ++G++ + H LL M P T
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559
Query: 118 YNILLH------VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+N+L++ +L G++ L+ M E G P+ F +LM N+ A
Sbjct: 560 FNVLMNGFCMSGMLEDGER------LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+ M ++G MPD Y ++I + A +++A L M+ KG TY+++IRGF
Sbjct: 614 IYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFY 673
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KF EA + +EM G +Y+ V
Sbjct: 674 KRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 89/185 (48%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++ +E G + + NI+LH L + K A NLL M + G P V+ + ++ G
Sbjct: 228 KVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGY 287
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G LD DE+ KG PD Y +I GE+ +A+ L GM G P+
Sbjct: 288 CRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDN 347
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
Y ++I GFC G AC + EM + P+ + Y +++ + +GK+ EA E+
Sbjct: 348 VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNE 407
Query: 281 MVEKG 285
M+ KG
Sbjct: 408 MLVKG 412
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 134/322 (41%), Gaps = 43/322 (13%)
Query: 5 GFPTTARTF---NILICTCGEVGLARKVVERFIKSKLFNFR----PFKNSYNA--ILHAL 55
F TT R F + + + L R+V + L FR P+++ + ++ L
Sbjct: 27 NFSTTPRPFPDYSPRNPSISDTDLVRRVTTTLKRRHLEPFRRVLKPYESRFKPSHLIWVL 86
Query: 56 LGIR-QYKLI----EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM---G 107
+ ++ Y L+ W Q S + + P + + IV+ + RL+ E
Sbjct: 87 INLKNDYPLVLNLFNWAKSQ-SQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKP 145
Query: 108 RSGFSPDFHTYNILLHVLGK--GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG- 164
+ S FH + +L K G PL + E GF VL L L R G
Sbjct: 146 KIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGF---VLEAQKLFHKLLRYGV 202
Query: 165 --NLDACKYF-----------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
++D+C F F+E G + V +++ G++ +A
Sbjct: 203 VVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAH 262
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L M +G P+V +Y ++ G+C G+ D+ ++ E++ +G P+ +YN ++ L
Sbjct: 263 NLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLL 322
Query: 266 RNAGKLAEAHEVIRHMVEKGKY 287
G++ EA +++R M + G +
Sbjct: 323 CKNGEVVEAEQLLRGMRKWGVF 344
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 94/220 (42%), Gaps = 20/220 (9%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--LLGIR 59
GF T+ L+ C GE+ A +++ + +L +P ++N +++ + G+
Sbjct: 517 GFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL---QPTLVTFNVLMNGFCMSGML 573
Query: 60 Q--YKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +LIEW M ++G P+ T+N +M C K + + ++ M G PD
Sbjct: 574 EDGERLIEW----MLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYK---AMHDRGVMPD 626
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TYNIL+ K A L M E G+ + + L+ G + + F+
Sbjct: 627 SNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFE 686
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
EM G + + Y + + G E +L D +T+
Sbjct: 687 EMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTE 726
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 10/184 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ T TFN+L+ C G + +++E ++ + P ++N+++
Sbjct: 548 MLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIM---PNATTFNSLMKQYCI 604
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y+ M D G PD TYNI++ + + + L EM G+S T
Sbjct: 605 KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAAT 664
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN----LDACKYFF 173
Y+ L+ K K + A L M++ G + +D GN L+ C F
Sbjct: 665 YDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFM 724
Query: 174 DEMA 177
E++
Sbjct: 725 TELS 728
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/287 (32%), Positives = 142/287 (49%), Gaps = 5/287 (1%)
Query: 1 MIENGFPTTARTFNILI--CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
M E GF A ++N LI G A KV +R I + +P +Y+A++ AL
Sbjct: 192 MTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGM---KPSMKTYSALMVALGRR 248
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ I + ++M G P+I TY I + A R ++D + EM G PD TY
Sbjct: 249 GDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITY 308
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+L+ L K A L M+ P + + TLMD + G+L+ K F++EM
Sbjct: 309 TVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEV 368
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PDVV YT++I + +G++++A D+ D M TKG PN+ TYN+MI G A + DE
Sbjct: 369 DGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDE 428
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++ MES G P Y + +G A+A + M ++G
Sbjct: 429 ALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 143/277 (51%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+ +LI G K E ++K + + P + +Y ++ +
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ + +M +GYAPD++TY I++ A + G +D+ +LD M G P+ HTYN
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + AL LL +M+ +G P+ + +D ++G+ F+ M +G
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRG 475
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MP + + + G + +A+D+F+ + G P+ TYN +++ + AG+ D+A
Sbjct: 476 IMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKAT 535
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
++ EM S+GC P+ ++ N+L++ L AG++ A ++
Sbjct: 536 QLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKM 572
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 137/260 (52%), Gaps = 2/260 (0%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A+ V ++F K+ P SYN ++ LLG + +++ M G P+ TYN+
Sbjct: 779 AQNVFDKFTKN--LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNL 836
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + ++++ + L EM G P+ T+NI++ L K + AL+L +
Sbjct: 837 LLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGD 896
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P+ + L+DGL +AG + F+EM + GC P+ V Y ++I + +GE++ A
Sbjct: 897 FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFAC 956
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+LF M+ +G P++ +Y ++ C+ G+ DEA +E++ G +P+ + YN +++ L
Sbjct: 957 ELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGL 1016
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ +L EA + M +G
Sbjct: 1017 GKSRRLDEALSLFSEMKNRG 1036
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 143/320 (44%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G + +T++ L+ G G RK++ + K RP +Y + AL R+
Sbjct: 226 MISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARR 285
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRL------------------------ 93
++++M DEG PD++TY ++ +CA +L
Sbjct: 286 IDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYIT 345
Query: 94 --------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
G L+ R +EM G++PD TY IL+ L K A ++L+ M G
Sbjct: 346 LMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKG 405
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P++ + T++ GL +A LD + M + G P Y + I Y +G+ KA
Sbjct: 406 IFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAI 465
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D F+ M +G +P++ N+ + G+ EA + ++ G +P+ + YN L+
Sbjct: 466 DTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCY 525
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
AG++ +A +++ M+ KG
Sbjct: 526 SKAGQIDKATQLLSEMISKG 545
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G A T NI+I + K ++ + + +F P +Y ++ LL +
Sbjct: 857 MRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGR 916
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++++M D G P+ + YNI++ + G++D L +M + G PD +Y I
Sbjct: 917 SEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A+ +K G DP + + +++GL ++ LD F EM N+G
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ Y +I AG+++ A +++ + G P+VFTYN++IRG ++G D+A
Sbjct: 1037 ISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAF 1096
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
++ K+M GC+PN + L + AG
Sbjct: 1097 SVFKKMMVVGCSPNTETFAQLPNKYPRAG 1125
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 135/275 (49%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KLIEWVYQQ 70
T+N+L+ G+ K+ + + + + P ++N I+ AL+ K ++ Y+
Sbjct: 833 TYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYEL 892
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
MS + ++P TY ++ + G+ +Q ++ +EM G P+ YNIL++ GK +
Sbjct: 893 MSGD-FSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGE 951
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M + G P + +T L++ L G +D +F+E+ G PD V Y
Sbjct: 952 IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I + L++A LF M +G P+++TYN++I +AGK D A M +E++ G
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ YN L+ +G +A V + M+ G
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVG 1106
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 119/258 (46%), Gaps = 42/258 (16%)
Query: 66 WVYQQMSDEGYAPDILTYN---IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ ++M++ G+ + +YN ++ + L + R++ E G P TY+ L+
Sbjct: 187 FALRKMTEVGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISE----GMKPSMKTYSALM 242
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
LG+ +NLL MK +G P++ +T + L RA +D F EM ++GC
Sbjct: 243 VALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCG 302
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLF---------------------------------- 208
PDV+ YTV+I + AAG+L+KA++L+
Sbjct: 303 PDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRF 362
Query: 209 -DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+ M G P+V TY +I C +G D A M+ M ++G PN YNT++ L
Sbjct: 363 WNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLK 422
Query: 268 AGKLAEAHEVIRHMVEKG 285
A +L EA E++ +M G
Sbjct: 423 ARRLDEALELLENMESLG 440
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 123/288 (42%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N +IC + + +E + +P SY +L I
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY------VLFIDY 454
Query: 61 Y-------KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
Y K I+ ++ M G P I N + G++ + + +++ + G SP
Sbjct: 455 YGKSGDPAKAID-TFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSP 513
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TYN+L+ K + A LL+ M G +P V+ +L++ L +AG +DA F
Sbjct: 514 DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ N P VV Y +++T G++ KA +LF M G PN T+NS++
Sbjct: 574 GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
D A M M CNP+ L YNT++ L G++ A M
Sbjct: 634 DAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 130/281 (46%), Gaps = 1/281 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA ++ + I G+ G K ++ F K P + NA L+ L +
Sbjct: 440 GVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEA 499
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E ++ + G +PD +TYN++M + G++D+ +LL EM G PD N L++
Sbjct: 500 EDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINT 559
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + AA + +K + P+V+ + L+ GL + G + F M GC P+
Sbjct: 560 LYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPN 619
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + ++ ++ A +F M P+V TYN++I G G+ D A
Sbjct: 620 TITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFH 679
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M+ + +P+++ TL+ + G++ +A +V+ V +
Sbjct: 680 QMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQA 719
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 124/283 (43%), Gaps = 11/283 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G P TFN L+ + ++ F + + N P +YN I++ L+ +
Sbjct: 611 MTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL-DQFHRLLDEMGRSGFSPDFHTYN 119
W + QM + +PD +T ++ R G++ D +++ + ++ + +
Sbjct: 671 IDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWG 729
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL-----SRAGNLDACKYFFD 174
L+ + + A++ E+ SV +M L R LDA F
Sbjct: 730 ELMECILTEAEIEEAISF----AEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDK 785
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
N G P + Y ++ + + EKA +LF+ M + G PN FTYN ++ +
Sbjct: 786 FTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSK 845
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ ++ + EM SRGC PN + +N ++S L + L +A ++
Sbjct: 846 RINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDL 888
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 10/277 (3%)
Query: 7 PTTARTFNILICTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
PTT ++ C C G+V A ++ +R + + SYN + + L Q
Sbjct: 105 PTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLD----RISYNMLTYGLCKADQIDRA 160
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFS--PDFHTYNI 120
V+ +M + P +LTYN ++ R G+++Q LL+EM G+ G PD ++YN
Sbjct: 161 LAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNT 220
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + A +L M + G P+V+ F TL+DGL G LD F+ M +
Sbjct: 221 VISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERN 280
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P V YTV+IT + A ++KA D F M+ +G PNV+TY ++I G C A K ++A
Sbjct: 281 CEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDAL 340
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
++K M S G PN + Y ++ L G++ A ++
Sbjct: 341 EILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKL 377
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 39/273 (14%)
Query: 51 ILHALLGIRQYKLIEWVYQQMS-DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS 109
++H L I+ KL V++ + E + + TYN + A + G + ++ D+M
Sbjct: 7 VIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYK 66
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV------------------- 150
P+ +TY I+L L K AAL LL M+ P+
Sbjct: 67 ECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAA 126
Query: 151 ---------------LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+ + L GL +A +D F EM +P ++ Y ++ Y
Sbjct: 127 YELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGY 186
Query: 196 IAAGELEKAQDLFDGMI--TKGQ--LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
AG +E+A L + MI KG +P++++YN++I GFC A + A +++ M GC
Sbjct: 187 CRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGC 246
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+PN + +NTL+ L GKL EA+ + +MVE+
Sbjct: 247 SPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER 279
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 35/216 (16%)
Query: 117 TYNILLHVLGKGDKP-LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T + ++HVL P LA+ ++ F+ +V + ++ L + G+ + FD+
Sbjct: 3 TEDDVIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDD 62
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF-------------- 221
M K C+P++ Y +++ + + A +L M +K P F
Sbjct: 63 MLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGK 122
Query: 222 --------------------TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+YN + G C A + D A + EME P+ L YN L
Sbjct: 123 VDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGL 182
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
+ AG++ +A ++ M+E K +V Y
Sbjct: 183 LYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSY 218
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E TA T+ +LI K + F+ P +Y A++ L +
Sbjct: 276 MVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANK 335
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL-DEMGR--SGFSPDFHT 117
+ + ++MS G P+++TY V+ A + G++++ +L D MG + PD +
Sbjct: 336 VEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYA 395
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
Y+ +++ L + K L A M E + + DGL
Sbjct: 396 YSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLE 439
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 149/288 (51%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TFNIL+ C G++ + V + +K + +P +YN+++
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI---KPNFVTYNSLMDGYCL 342
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + ++ M+ G PDI +Y+I++ ++ K D+ L EM R PD T
Sbjct: 343 VKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVT 402
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L K + AL L++ M + G P++ + +++D L + +D +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFK 462
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PD+ Y+++I +G+LE A+ +F+ ++ KG +V+ Y MI+GFC+ G F+
Sbjct: 463 DKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFN 522
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ +ME GC P+ Y ++ +L + A +++R M+ +G
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GE A +++R + L +P YN I+ ++ ++ ++ +M +G
Sbjct: 200 LCKVGETRAALDLLQR-VDGNLV--QPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGI 256
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD++TY+ ++ LGKL L ++M PD +T+NIL++ K K
Sbjct: 257 SPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKT 316
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ + M + G P+ + + +LMDG ++ K F+ MA G PD+ Y++MI +
Sbjct: 317 VFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFC 376
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+ ++A +LF M K +P+V TY+S+I G +G+ A ++ +M RG PN
Sbjct: 377 KIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNIC 436
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN+++ L ++ +A ++ +KG
Sbjct: 437 TYNSILDALCKTHQVDKAIALLTKFKDKG 465
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 135/273 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N +I + +V L + + F + P +Y+A++ + + K ++ +M
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
E PD+ T+NI++ A + GK+ + + D M + G P+F TYN L+ +
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A ++ N M + G +P + ++ +++G + D F EM K +PDVV Y+ +I
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+G + A L D M +G PN+ TYNS++ C + D+A ++ + + +G
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ 467
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y+ L+ L +GKL +A +V ++ KG
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKG 500
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 134/264 (50%), Gaps = 13/264 (4%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L++K+ R IK L N N + LG+ + V+ ++ GY PD +T+
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCF-----CQLGLIPFAF--SVFAKILKMGYVPDTITFT 159
Query: 85 IV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
+ +C K ++ + FH D++ GF D +Y L+H L K + AAL+LL +
Sbjct: 160 TLSKGLCLKGQIQQAFLFH---DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
P+V+ + T++D + + ++ F EM +KG PDVV Y+ +I+ + G+L
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+ A DLF+ MI + P+V+T+N ++ FC GK E T+ M +G PNF+ YN+L
Sbjct: 277 KDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ +A + M + G
Sbjct: 337 MDGYCLVKEVNKAKSIFNTMAQGG 360
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 126/258 (48%), Gaps = 6/258 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N L+ C EV A+ + + + P SY+ +++
Sbjct: 321 MMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV---NPDIQSYSIMINGFCK 377
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I+++ ++++M + PD++TY+ ++ + G++ +L+D+M G P+ T
Sbjct: 378 IKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICT 437
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +L L K + A+ LL K+ GF P + ++ L+ GL ++G L+ + F+++
Sbjct: 438 YNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL 497
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG DV YT+MI + G +A L M G +P+ TY +I + D
Sbjct: 498 VKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDEND 557
Query: 238 EACTMMKEMESRGCNPNF 255
A +++EM +RG NF
Sbjct: 558 MAEKLLREMIARGLPLNF 575
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 10/202 (4%)
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
F+RLL R +P +N +L L K L L M+ G P++++ L++
Sbjct: 73 FNRLL----RRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILIN 128
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+ G + F ++ G +PD + +T + G++++A D ++ G
Sbjct: 129 CFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHF 188
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ +Y ++I G C G+ A +++ ++ PN ++YNT++ ++ + EA ++
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248
Query: 279 RHMVEKG------KYIHLVSKF 294
MV KG Y L+S F
Sbjct: 249 SEMVSKGISPDVVTYSALISGF 270
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+ GF T++ILI C G++ ARKV E + K +N + +Y ++
Sbjct: 463 DKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL-VKGYNLDVY--AYTIMIQGFCVEG 519
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +M D G PD TY I++ + ++ + D +LL EM G +F+
Sbjct: 520 LFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLPLNFY 576
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF T+NI+I C+ G++ LA ++ E +K N P +Y ++ A +
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKD---NCEPTVITYTILIEATIL 220
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M +G PD LTYN ++ + +D+ LL + G PD T
Sbjct: 221 DGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIIT 280
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNILL L K L++ M +G P+V+ + L+ L R G ++ M
Sbjct: 281 YNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMK 340
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD CY +I + G L+ A + + MI+ G LP++ YN+++ G C GK D
Sbjct: 341 EKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKAD 400
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + ++++ GC PN YNTL S L ++G A E+I ++ +G
Sbjct: 401 QALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQG 448
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 147/290 (50%), Gaps = 7/290 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++++ T T+ ILI G + +A K+++ + L P +YNAI+ +
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGL---EPDTLTYNAIIRGMCK 255
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +S G PDI+TYNI++ GK + +L+ EM G P+ T
Sbjct: 256 EMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVT 315
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++IL+ L + K A+NLL MKE G P + L+ G R G LD F + M
Sbjct: 316 HSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMI 375
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC+PD+V Y ++ G+ ++A ++F+ + G PNV +YN++ +G
Sbjct: 376 SDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRY 435
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
A M+ ++ ++G +P+ + YN+L+S L G + EA E++ M + G+Y
Sbjct: 436 RALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM-QSGRY 484
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 145/296 (48%), Gaps = 23/296 (7%)
Query: 1 MIENGFPTTARTFNILICT-----------CGEVGLARKVVERFIKSKLFNFRPFKNSYN 49
M++ G+ T ++++CT G+ +++ER+ K +F +YN
Sbjct: 95 MVDKGY-----TPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVF-------AYN 142
Query: 50 AILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS 109
A++ + Q + V +M G+ PD++TYNI++ + GKLD + +E+ +
Sbjct: 143 ALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKD 202
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
P TY IL+ A+ LL+ M G +P L + ++ G+ + +D
Sbjct: 203 NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKA 262
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
++++GC PD++ Y +++ + ++ G+ + + L MI+ G PNV T++ +I
Sbjct: 263 FELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGT 322
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C GK +EA +++ M+ +G P+ Y+ L++ G+L A E + +M+ G
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 96/239 (40%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G T +ILI T G + V K +P Y+ ++ +
Sbjct: 304 MISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGR 363
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L + M +G PDI+ YN +M R GK DQ + +++ G P+ +YN
Sbjct: 364 LDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNT 423
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L L AL ++ + G DP + + +L+ L R G +D +M +
Sbjct: 424 LFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGR 483
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P+VV Y +++ A ++ M KG PN TY +I G +G EA
Sbjct: 484 YRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA 542
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 34/176 (19%)
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV----------------- 186
+ FD +H L++ RAG + YF + M +KG PDV+
Sbjct: 63 LSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGK 122
Query: 187 -----------------CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
Y +I+ +I A +LE A + D M ++G LP+V TYN MI
Sbjct: 123 ATRVMEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGS 182
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
FC GK D A + +E+ C P + Y L+ G + A +++ M+ KG
Sbjct: 183 FCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG 238
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 144/284 (50%), Gaps = 5/284 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T T+ ++ C G+ A ++ + ++ + P Y+AI+ +L
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M ++G PD+ TYN ++ G+ +LL EM SPD T
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + + +++DG + LDA + F MA
Sbjct: 328 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PDV +T +I Y A ++ +L M +G + N TYN++I GFC+ G +
Sbjct: 388 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + ++M S G P+ + NTL+ L + GKL +A E+ + M
Sbjct: 448 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 120/250 (48%), Gaps = 11/250 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN+++ ++ E + Q+M + +PD++TYN ++ A + GK + L DEM
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ TYN ++ K D+ AA ++ M G P V FTTL+DG A +
Sbjct: 352 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 411
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D EM +G + + V Y +I + G+L A DL MI+ G P++ T N++
Sbjct: 412 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 471
Query: 227 IRGFCMAGKFDEACTMMKEMESR-----------GCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ G C GK +A M K M+ G P+ L YN L+ L N GK EA
Sbjct: 472 LDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAE 531
Query: 276 EVIRHMVEKG 285
E+ M +G
Sbjct: 532 ELYEEMPHRG 541
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 144/320 (45%), Gaps = 42/320 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FNILI C+C ++ A + F K P ++ +LH L + +
Sbjct: 116 SFNILIKCFCSCSKLPFA---LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM + P+++T+ +M R G++ + LLD M G P TY ++ + K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 129 DKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD--- 184
++ALNLL M+EV P+V+ ++ ++D L + G + F EM KG PD
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 185 --------------------------------VVCYTVMITSYIAAGELEKAQDLFDGMI 212
VV Y +I +++ G+ +A +L+D M+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEML 352
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G +PN TYNSMI GFC + D A M M ++GC+P+ + TL+ A ++
Sbjct: 353 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 412
Query: 273 EAHEVIRHMVEKGKYIHLVS 292
+ E++ M +G + V+
Sbjct: 413 DGMELLHEMPRRGLVANTVT 432
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 38/288 (13%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + + ++ ++ + + L+ +YQ+M + DI ++NI++
Sbjct: 68 SDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSC 127
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+ LLH L D+ AL+ + M E P+V+ F
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTF 187
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG--------------------------------- 180
TTLM+GL R G + D M G
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 181 ---CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+P+VV Y+ +I S G AQ+LF M KG P++FTYNSMI GFC +G++
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++EM R +P+ + YN L++ GK EA E+ M+ +G
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRG 355
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 46/338 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E T+N LI + G + E + + P +YN+++ +
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ M+ +G +PD+ T+ ++ ++D LL EM R G + TYN
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+H AAL+L M G P ++ TL+DGL G L DA + F
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495
Query: 173 --------------------------------------FDEMANKGCMPDVVCYTVMITS 194
++EM ++G +PD + Y+ MI
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
L++A +F M +K PNV T+N++I G+C AG+ D+ + EM RG +
Sbjct: 556 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 615
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++Y TL+ R G + A ++ + M+ G Y ++
Sbjct: 616 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 653
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G++ A + ++ I S + P + N +L L
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC---PDIVTCNTLLDGLCD 477
Query: 58 IRQYKLIEWVYQQMSDE-----------GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ K +++ M G PD+LTYNI++C GK + L +EM
Sbjct: 478 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 537
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + M F P+V+ F TL++G +AG +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 597
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + D + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 598 DDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ GF + + A M+++++
Sbjct: 658 LTGFWSKEELERAVAMLEDLQ 678
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 11/246 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++H + + QQM G PDI+T N ++ GKL + M
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 491
Query: 107 GRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+S G PD TYNIL+ L K L A L M G P + +++
Sbjct: 492 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 551
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++DGL + LD F M +K P+VV + +I Y AG ++ +LF M +G
Sbjct: 552 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 611
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ + Y ++I GF G + A + +EM S G P+ + +++ + +L A
Sbjct: 612 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 671
Query: 276 EVIRHM 281
++ +
Sbjct: 672 AMLEDL 677
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%)
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + L+ L +M RS P + L+ V+ + ++P ++L M+ +
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
F L+ L F ++ G PDVV +T ++ + +A D F
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M PNV T+ +++ G C G+ EA ++ M G P + Y T+V + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 271 LAEAHEVIRHMVEKGKYI 288
A ++R M E I
Sbjct: 235 TVSALNLLRKMEEVSHII 252
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 151/279 (54%), Gaps = 6/279 (2%)
Query: 10 ARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
RT+ IL+ G+ G A+ V+ +K+ + +P +YN +++ L + + K +
Sbjct: 517 VRTYTILVDALGKEGKVKEAKSVLAVMLKACV---KPDVFTYNTLMNGYLLVYEVKKAQH 573
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ MS G PD+ TY I++ + +D+ L EM + PD TY+ L+ L
Sbjct: 574 VFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLC 633
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + +L++ M++ G V+ + +L+DGL + G+LD F++M ++G P+
Sbjct: 634 KSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTF 693
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+T+++ G L+ AQ++F ++TKG +V+ YN MI G C G +EA TM+ +M
Sbjct: 694 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKM 753
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E GC PN + ++ +++ L + +A +++R M+ +G
Sbjct: 754 EENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 41/328 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI ++G R ++ K +P Y+ I+ AL +
Sbjct: 403 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC---K 459
Query: 61 YKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y+L+ Y +M+ +G + D++TY+ ++ +GKL + LL+EM +PD T
Sbjct: 460 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRT 519
Query: 118 YNILLHVLGKGDKPLAALNLL-----------------------------------NHMK 142
Y IL+ LGK K A ++L N M
Sbjct: 520 YTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS 579
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+G P V +T L++G ++ +D F EM K +PD V Y+ ++ +G +
Sbjct: 580 LMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRIS 639
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
DL D M +GQ +V TYNS+I G C G D+A + +M+ +G PN + L+
Sbjct: 640 YVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILL 699
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
L G+L +A EV + ++ KG ++ +
Sbjct: 700 DGLCKGGRLKDAQEVFQDLLTKGYHLDV 727
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 142/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+P + T N LI C G+V A ++ + F+ + SY +++ +
Sbjct: 368 ILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ---GFQLNQVSYATLINGVCK 424
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + +++ P++ Y+ ++ A + + + + L EM G S D T
Sbjct: 425 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 484
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L++ K A+ LLN M +P V +T L+D L + G + K M
Sbjct: 485 YSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVML 544
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDV Y ++ Y+ E++KAQ +F+ M G P+V TY +I GFC + D
Sbjct: 545 KACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVD 604
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + KEM + P+ + Y++LV L +G+++ ++I M ++G+ +++
Sbjct: 605 EALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVIT 659
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 131/279 (46%), Gaps = 1/279 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++NI+I ++ K + F + L F P +N IL + ++ Y
Sbjct: 268 GVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQ-FNKILDSFAKMKHYSTA 326
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ +G PD+ T NI++ +G++ +L ++ + G+ P T N L+
Sbjct: 327 VSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKG 386
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + AL+ + + GF + + + TL++G+ + G+ ++ + P+
Sbjct: 387 LCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPN 446
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y+ +I + + +A LF M KG +V TY+++I GFC+ GK EA ++
Sbjct: 447 VEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN 506
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
EM + NP+ Y LV L GK+ EA V+ M++
Sbjct: 507 EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLK 545
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 140/290 (48%), Gaps = 11/290 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
++ GF ++ LI +G R ++ R I +L +P YN I+ AL
Sbjct: 89 LLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLA--KPNVEMYNTIIDALC-- 144
Query: 59 RQYKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+Y+L+ Y +M+ +G + +++TY+ ++ +GKL + LL+ M +P+
Sbjct: 145 -KYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNV 203
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYNIL+ L K K A ++L M + +V+ ++TLMDG + ++ F+
Sbjct: 204 CTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNA 263
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ G PDV Y +MI + ++KA +LF MI + P + +N ++ F
Sbjct: 264 MSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMIL-SRFPPIIQFNKILDSFAKMKH 322
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A ++ +E +G P+ N L++ + G++ V+ ++++G
Sbjct: 323 YSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 372
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+P T N LI C G+V A ++ + F+ + SY +++ +
Sbjct: 54 ILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQ---GFQLNQVSYATLINGVCR 110
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + +++ P++ YN ++ A + + + + L EM G S + T
Sbjct: 111 IGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVT 170
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L++ K AL LLN M +P+V + L+D L + G + K M
Sbjct: 171 YSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVML 230
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+V+ Y+ ++ Y E++KAQ +F+ M G P+V +YN MI GFC + D
Sbjct: 231 KACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVD 290
Query: 238 EACTMMKEM 246
+A + KEM
Sbjct: 291 KALNLFKEM 299
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 92/182 (50%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+L ++ + G+ PD T N L+ L + AL+ + + GF + + + TL++G+
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G+ A F ++ + P+V Y +I + + +A LF M KG NV
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+++I GFC+ GK EA ++ M + NPN YN LV L GK+ EA V+ M
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229
Query: 282 VE 283
++
Sbjct: 230 LK 231
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 6/218 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V ++ GY PD +T N + +C K ++ + FH D++ GF + +Y L++
Sbjct: 50 VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFH---DKLLAQGFQLNQVSYATLIN 106
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + AA+ L + P+V + T++D L + + F EM KG
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+VV Y+ +I + G+L++A L + M+ K PNV TYN ++ C GK EA +++
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
M N + Y+TL+ ++ +A V M
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI + + + + F + N P +Y++++ L + +
Sbjct: 582 GVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYV 641
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M D G D++TYN ++ + G LD+ L ++M G P+ T+ ILL
Sbjct: 642 WDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDG 701
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L KG + A + + G+ V + ++ G + G L+ +M GC+P+
Sbjct: 702 LCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPN 761
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
V + ++I + E +KA+ L MI +G L
Sbjct: 762 AVTFDIIINALFKKDENDKAEKLLRQMIARGLL 794
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 105/242 (43%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+ P + N ++ L Q K + ++ +G+ + ++Y ++ R+G
Sbjct: 59 YPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAI 118
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+ L ++ P+ YN ++ L K A L + M G +V+ ++TL+ G
Sbjct: 119 KFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGF 178
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G L + M K P+V Y +++ + G++++A+ + M+ NV
Sbjct: 179 CIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNV 238
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY++++ G+ + + +A + M G P+ YN +++ ++ +A + +
Sbjct: 239 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKE 298
Query: 281 MV 282
M+
Sbjct: 299 MI 300
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T+N LI + G K + F K K RP ++ +L L +
Sbjct: 648 MRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 707
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V+Q + +GY D+ YN+++ + G L++ +L +M +G P+ T++I
Sbjct: 708 LKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDI 767
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGF 146
+++ L K D+ A LL M G
Sbjct: 768 IINALFKKDENDKAEKLLRQMIARGL 793
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 141/277 (50%), Gaps = 10/277 (3%)
Query: 7 PTTARTFNILICTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
PTT ++ C C G+V A ++ +R + + SYN + + L Q
Sbjct: 105 PTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLD----RISYNMLTYGLCKADQIDRA 160
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFS--PDFHTYNI 120
V+ +M + P +LTYN ++ R G+++Q LL+EM G+ G PD ++YN
Sbjct: 161 LAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNT 220
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + A +L M + G P+V+ F TL+DGL G LD F+ M +
Sbjct: 221 VISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERN 280
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P V YTV+IT + A ++KA D F M+ +G PNV+TY ++I G C A K ++A
Sbjct: 281 CEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDAL 340
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
++K M S G PN + Y ++ L G++ A ++
Sbjct: 341 EILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKL 377
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 124/273 (45%), Gaps = 39/273 (14%)
Query: 51 ILHALLGIRQYKLIEWVYQQMS-DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS 109
++H L I+ KL V++ + E + + TYN + A + G + ++ D+M
Sbjct: 7 VIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYK 66
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV------------------- 150
P+ +TY I+L L K AAL LL M+ P+
Sbjct: 67 ECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAA 126
Query: 151 ---------------LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+ + L GL +A +D F EM +P ++ Y ++ Y
Sbjct: 127 YELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGY 186
Query: 196 IAAGELEKAQDLFDGMI--TKGQ--LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
AG +E+A L + MI KG +P++++YN++I GFC A + A +++ M GC
Sbjct: 187 CRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGC 246
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+PN + +NTL+ L GKL EA+ + +MVE+
Sbjct: 247 SPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER 279
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 35/216 (16%)
Query: 117 TYNILLHVLGKGDKP-LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T + ++HVL P LA+ ++ F +V + ++ L + G+ + FD+
Sbjct: 3 TEDDVIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDD 62
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF-------------- 221
M K C+P++ Y +++ + + A +L M +K P F
Sbjct: 63 MLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGK 122
Query: 222 --------------------TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+YN + G C A + D A + EME P+ L YN L
Sbjct: 123 VDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGL 182
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
+ AG++ +A ++ M+E K +V Y
Sbjct: 183 LYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSY 218
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E TA T+ +LI K + F+ P +Y A++ L +
Sbjct: 276 MVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANK 335
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL-DEMGR--SGFSPDFHT 117
+ + ++MS G P+++TY V+ A + G++++ +L D MG + PD +
Sbjct: 336 VEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYA 395
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
Y+ +++ L + K L A M E + + DGL
Sbjct: 396 YSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLE 439
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E TF ILI C + A V E + L P +YNA++
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL---EPDVYTYNALVDGYCS 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + ++ M +G AP++ +YNI++ + G++D+ LL EM +PD T
Sbjct: 198 RSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFT 257
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ + +P A LL M G P+++ ++ ++DGL + G+LD M
Sbjct: 258 YSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQ 317
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P++ YT++I G+LE A++LF + KG P V TY MI G G +
Sbjct: 318 ESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSN 377
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC + +EM GC PN YN ++ G A +I MV KG
Sbjct: 378 EACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKG 425
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T TFN L+ C+ ++ A K+ + +K P +Y+ I++ L
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVK---MGHEPDVITYSTIINGLCK 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M ++G P+++ YN ++ + + + + EM + G PD T
Sbjct: 58 MGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFT 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ +LH + A +L M E P+ + FT L+DGL + + F+ M
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PDV Y ++ Y + ++++AQ LF+ M KG PNV +YN +I G C +G+ D
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++ EM + P+ Y+TL+ G+ EA E+++ M G +L++
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLIT 292
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T++ +I C G +A +++++ + +P +YN I+ +L
Sbjct: 36 MVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEK---GCKPNVVAYNTIIDSLCK 92
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + +M EG PD+ TY+ ++ LG++++ L +M P+ T
Sbjct: 93 DRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVT 152
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ IL+ L K A + M E G +P V + L+DG +D + F+ M
Sbjct: 153 FTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMD 212
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+V Y ++I + +G +++A+ L M K P++FTY++++RGFC G+
Sbjct: 213 RKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQ 272
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
EA ++KEM S G PN + Y+ ++ L G L EA E+++ M E
Sbjct: 273 EAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQE 318
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 133/289 (46%), Gaps = 25/289 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNF------RPFKNSYNAI 51
M E G T+N L+ C+ ++ A+K LFN P SYN +
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQK---------LFNIMDRKGCAPNVRSYNIL 226
Query: 52 LHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
++ + + + +MS + PDI TY+ +M ++G+ + LL EM G
Sbjct: 227 INGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGL 286
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
P+ TY+I+L L K A LL M+E +P++ +T L++G+ G L+A +
Sbjct: 287 LPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARE 346
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F + KG P VV YTVMI+ + G +A +LF M G LPN TYN +I+GF
Sbjct: 347 LFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFL 406
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
G A +++EM +G ++ S R L + E+I
Sbjct: 407 RNGDTPNAVRLIEEMVGKG-------FSADSSTFRMLSDLESSDEIISQ 448
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 151/333 (45%), Gaps = 37/333 (11%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
GF + F +I +VGLA + VE F + K F P YN +L LLG + ++
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQM 164
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD--------- 114
I VY+ M +G+ P++ TYN+++ A + K+D +LL EM G PD
Sbjct: 165 IYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVIS 224
Query: 115 ---------------------FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
YN L++ L K A L+ M E G P+V+ +
Sbjct: 225 SMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+TL++ L +G ++ F +M +GC P++ + ++ G A DL++ MI
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 214 K-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G PNV YN++++GFC G +A ++ ME GC+PN Y +L++ G L
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 273 EAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A + M+ G Y ++V R+ +
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSK 437
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 161/325 (49%), Gaps = 48/325 (14%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G A ++ +I + EVGL R++ ERF P + YNA+++ L
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF--------EPVVSVYNALINGLCK 258
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
YK + ++M ++G +P++++Y+ ++ G+++ L +M + G P+ +T
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYT 318
Query: 118 YNILLH------------------VLGKGDKP------------------LAALNLLNHM 141
+ L+ + G G +P + A+++ +HM
Sbjct: 319 LSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHM 378
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+E+G P++ + +L++G ++ G+LD Y +++M GC P+VV YT M+ + +
Sbjct: 379 EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKF 438
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFLVYNT 260
++A+ L + M + P+V T+N+ I+G C AG+ D A + ++ME + C PN + YN
Sbjct: 439 KEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNE 498
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ L A ++ EA+ + R + +G
Sbjct: 499 LLDGLAKANRIEEAYGLTREIFMRG 523
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 131/278 (47%), Gaps = 7/278 (2%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
V LA + S LF P ++ ++ L Q ++++ QQM +G+
Sbjct: 56 VPLALHFFKSIANSNLFKHTPL--TFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL 113
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+ V+ ++G ++ + + G P YN +L L ++ + MK
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
GF+P+V + L+ L + +D K EM+NKGC PD V YT +I+S G ++
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ ++L + P V YN++I G C + A +M+EM +G +PN + Y+TL+
Sbjct: 234 EGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+ L N+G++ A + M+++G + ++ + K C
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 1/241 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F +P +YN ++ V+ M + G +P+I TY ++ + G LD
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ ++M SG P+ Y ++ L + K A +L+ M + PSV F +
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 159 GLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
GL AG LD + F +M + C P++V Y ++ A +E+A L + +G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ TYN+++ G C AG A ++ +M G +P+ + N ++ GK A ++
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 278 I 278
+
Sbjct: 586 L 586
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 5/220 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++ AL ++K E + + MS E AP + T+N + G+LD ++ +M
Sbjct: 425 YTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME 484
Query: 108 RSG-FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ P+ TYN LL L K ++ A L + G + S + TL+ G AG
Sbjct: 485 QQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLP 544
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ---LPNVFTY 223
+M G PD + ++I +Y G+ E+A + D +++ G+ P+V +Y
Sbjct: 545 GIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD-LVSCGRRKWRPDVISY 603
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
++I G C + ++ +++ M S G P+ ++ L++
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 3/196 (1%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAP-DILTYNIVMCAKYRLGKLDQ 98
N P ++NA + L + E V++QM + P +I+TYN ++ + ++++
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ L E+ G TYN LLH P AL L+ M G P + ++
Sbjct: 512 AYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIIL 571
Query: 159 GLSRAGNLDACKYFFDEMA--NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ G + D ++ + PDV+ YT +I + E L + MI+ G
Sbjct: 572 AYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGI 631
Query: 217 LPNVFTYNSMIRGFCM 232
+P++ T++ +I F +
Sbjct: 632 VPSIATWSVLINCFIL 647
>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 822
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 144/296 (48%), Gaps = 7/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T++ I C + A V+ + I + F P K +YN ++H
Sbjct: 253 MMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISN---GFEPDKVTYNCMIHGYSI 309
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q+K ++++M+ G PDI T N M + + GK + D M G PD T
Sbjct: 310 LGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVT 369
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++LLH + LNL N M+ G + L+D + G +D F +M
Sbjct: 370 YSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQ 429
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G MPD Y +I ++ G L A D F+ MI G P+ YNS+I+GFCM G
Sbjct: 430 ERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLV 489
Query: 238 EACTMMKEMESRGC-NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A ++ EM SRG PN + +N+++++L G++ EA ++ ++ G+ +++
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVIT 545
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 1/225 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ QM + G PD TY V+ A R+G+L ++M G PD YN L+
Sbjct: 424 IFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFC 483
Query: 127 KGDKPLAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ A L++ M G P+ + F ++++ L + G + + FD + + G PDV
Sbjct: 484 MHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDV 543
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ + +I Y G++EKA + D MI+ G P+V TY++++ G+C G+ D+ + +E
Sbjct: 544 ITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFRE 603
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
M S+G P + Y ++ L N G+ A ++ M+E G + +
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 3/221 (1%)
Query: 75 GYAPDILTYNIVM-CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G D++ NI++ C + D + LL M G PD +Y+ +L L + +
Sbjct: 149 GLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQR 208
Query: 134 ALNLLNHM--KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL+LL+ M K G P+V+ + T++ G R G + F EM +G +PDVV Y+
Sbjct: 209 ALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSY 268
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + A ++KA+ + MI+ G P+ TYN MI G+ + G++ E M +EM RG
Sbjct: 269 IDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGL 328
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ N+ +S+L GK EA E M KG LV+
Sbjct: 329 MPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVT 369
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 9/307 (2%)
Query: 2 IENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIR 59
++ G T NIL+ C C V + P SY+ +L +L R
Sbjct: 146 LKTGLKTDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSR 205
Query: 60 QYKLIEWVYQQMSDEG-YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ ++ ++ + G +P++++YN V+ +R G++ + L EM + G PD TY
Sbjct: 206 SQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTY 265
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + L K A +L M GF+P + + ++ G S G F EM
Sbjct: 266 SSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTR 325
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G MPD+ ++S G+ ++A + FD M KG P++ TY+ ++ G+ G +
Sbjct: 326 RGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVD 385
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
+ ME G + VYN L+ G + EA + M E+G Y +++
Sbjct: 386 MLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIA 445
Query: 293 KFKRYKR 299
F R R
Sbjct: 446 AFSRMGR 452
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
M E G A T+ +I +G +++F + +P YN+++ +
Sbjct: 428 MQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGN 487
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
K E + + MS P+ + +N ++ + + G++ + + D + G PD T+N
Sbjct: 488 LVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFN 547
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ G K A +L+ M VG +P V+ ++ L+DG R G +D F EM +K
Sbjct: 548 SLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK 607
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P + Y +++ G A+ + MI G ++ T ++ G C DEA
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEA 667
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K++ + N + NT++ + K EA+E+ + G
Sbjct: 668 IALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATG 713
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 124/294 (42%), Gaps = 9/294 (3%)
Query: 1 MIENGFPTTARTF-NILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
M+ G P F N +I C G V A+ + + I RP ++N+++
Sbjct: 498 MMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH---IGERPDVITFNSLIDGYG 554
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + + V M G PD++TY+ ++ R G++D L EM G P
Sbjct: 555 LVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTI 614
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY I+LH L + + A + + M E G + ++ GL R D F ++
Sbjct: 615 TYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKL 674
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++ MI + + E+A +LFD + G +PN TY MI G
Sbjct: 675 GAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSV 734
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+EA M ME GC P+ + N ++ L G++++A + + GK I L
Sbjct: 735 EEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKV--DGKTISL 786
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 112/262 (42%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI G VG K P +Y+A+L + ++++M
Sbjct: 545 TFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREM 604
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G P +TY I++ + G+ ++ EM SG + D T I+L L + +
Sbjct: 605 LSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ L + + ++ T++D + + + FD ++ G +P+ Y VM
Sbjct: 665 DEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVM 724
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
IT+ + G +E+A ++F M G P+ N++IR G+ +A + +++ +
Sbjct: 725 ITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTI 784
Query: 252 NPNFLVYNTLVSNLRNAGKLAE 273
+ + ++S GK E
Sbjct: 785 SLEASTASLMLSLFSRKGKYRE 806
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 144 bits (362), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/275 (33%), Positives = 138/275 (50%), Gaps = 11/275 (4%)
Query: 22 EVGLA-RKVVERFIKSKLFNFRP-FKNS-------YNAILHALLGIRQYKLIEWVYQQMS 72
+ GLA R R I S L +RP NS Y+ ++ L Q ++++M
Sbjct: 59 DTGLAVRTRRRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREME 118
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
++G APD TYNI++ + +L+ L+DEM GFSP TY L+H +
Sbjct: 119 EKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVD 178
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG--CMPDVVCYTV 190
AA+++L+ M+ G P+ + +T L+ GL G ++ EM +G C P+VV YT
Sbjct: 179 AAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQ 238
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I G E + D MI G PN TY ++I G C G F EA ++ EM + G
Sbjct: 239 LIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIG 298
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C + ++YN+L+ L G+L A E+ MVEKG
Sbjct: 299 CELDVVIYNSLIDGLCKMGELDFAREMQILMVEKG 333
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 141/306 (46%), Gaps = 40/306 (13%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ A +E F + + P +YN +++ L Q ++ + +M G+
Sbjct: 101 LCKKGQIAEA---MEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P ++TY ++ G++D +LDEM G +P+ TY L+ L + A+
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAIL 217
Query: 137 LLNHMKEVGFD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP----------- 183
+L MK G + P+V+ +T L+ GL + G + F DEM GC P
Sbjct: 218 VLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHG 277
Query: 184 ------------------------DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
DVV Y +I GEL+ A+++ M+ KG P+
Sbjct: 278 LCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPD 337
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
VFTY S+I+G C AG DEA +M+EM ++G PN + Y TL++ A + A +++
Sbjct: 338 VFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVN 397
Query: 280 HMVEKG 285
M G
Sbjct: 398 EMKSNG 403
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 127/270 (47%), Gaps = 8/270 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF T T+ LI CT G V A +++ + P +Y A++ L
Sbjct: 152 MQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM---EHRGITPNTVTYTALIQGLCD 208
Query: 58 IRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + V ++M G P+++TY ++ + G + LDEM SG P+
Sbjct: 209 CGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNN 268
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+H L + L A LLN M +G + V+ + +L+DGL + G LD +
Sbjct: 269 ATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQIL 328
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M KG PDV YT +I AG L++A L M KG +PN TY ++I GF A +
Sbjct: 329 MVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADR 388
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D A ++ EM+S G P +Y L +L
Sbjct: 389 TDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
Length = 784
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 145/295 (49%), Gaps = 9/295 (3%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH--ALLGIRQYKLIEWV 67
A + L+ G R V F + +P +YN +LH + + + +++E V
Sbjct: 172 AGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELV 231
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
M + G APD TYN ++ R + ++ DEM SGF PD T+N LL V GK
Sbjct: 232 -ASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A+ ++ M+ VG PSV+ + +L+ + G L+ EM KG PDVV
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVT 350
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT +I+ AG+++ A +D M+ G PN+ TYN++I+ + GKF E + E+
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELR 410
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKR 296
S G P+ + +NTL++ G +E V + M E+ Y+ L+S + R
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 465
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 140/288 (48%), Gaps = 1/288 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+++G T+N+++ ++ + ++VVE K P + +YN ++
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YK V+ +M G+ PD +T+N ++ + + D+ ++ EM R G P TYN
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K A+ L M+ G P V+ +TTL+ GL RAG +DA +DEM
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ Y +I + G+ + +FD + + G +P++ T+N+++ F G E
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ KEM+ G P Y +L+S+ G A ++ + M+E G Y
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 114/244 (46%), Gaps = 1/244 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHR 101
P +Y A++ A +++ V+++M D G P I+TYN+V+ ++ +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ M G +PD +TYN L+ + A + + MK GF+P + F +L+D
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A D EM GC P VV Y +I+SY+ G LE+A L M KG P+V
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVV 349
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY ++I G AGK D A EM GC PN YN L+ GK E V +
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEL 409
Query: 282 VEKG 285
G
Sbjct: 410 RSAG 413
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 35/306 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G T+N LI C L ++ + F + K F P K ++N++L R+
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 61 Y-KLIEWVY----------------------------------QQMSDEGYAPDILTYNI 85
+ + IE + Q+M +G PD++TY
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTT 353
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ R GK+D DEM R+G P+ TYN L+ + G K + + + ++ G
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAG 413
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P ++ + TL+ + G F EM G +P+ Y +I+SY G + A
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ M+ G P+V TYN+++ G++++A + EME R C P+ Y++L+
Sbjct: 474 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAY 533
Query: 266 RNAGKL 271
NA +L
Sbjct: 534 ANAKRL 539
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 41/312 (13%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G+ T+ LI + CG LA ++ +R +++ ++ P ++YNA+L AL
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY---PDVSTYNAVLSALAR 500
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP---- 113
+++ E ++ +M + PD +Y+ ++ A +LD+ L D++ P
Sbjct: 501 GGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWL 560
Query: 114 -------------------------------DFHTYNILLHVLGKGDKPLAALNLLNHMK 142
D + N ++ + GK +L+ MK
Sbjct: 561 VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK 620
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E + S + +LM SR G+ + C+ E+ + G PD Y +I +Y G+++
Sbjct: 621 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMK 680
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A LF M G P+V TYN ++ + F+EA +++ M ++GC PN YN++V
Sbjct: 681 EASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIV 740
Query: 263 SNLRNAGKLAEA 274
GKL +A
Sbjct: 741 EGYCRNGKLTDA 752
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 4/282 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQYK 62
G P + T+N LI + + GL + V + ++ +P +Y ++ L G
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAA 367
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++E Y +M G P++ TYN ++ GK + + DE+ +GF PD T+N LL
Sbjct: 368 IVE--YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLL 425
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
V G+ + MK+ G+ P + +L+ SR G D + M G
Sbjct: 426 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDV Y ++++ G E+A+ LF M + P+ ++Y+S++ + A + D+ +
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ S P+ + TLV LAEA + + +K
Sbjct: 546 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 587
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 35/316 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ GL +V F + K + P +++Y +++ + + L
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 472
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y++M + G PD+ TYN V+ A R G+ +Q +L EM PD ++Y+ LLH
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ L + + +P TL+ S+ NL + F E+ K C D
Sbjct: 533 YANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLD 592
Query: 185 VVCYTVMITSY----------------------IAA-------------GELEKAQDLFD 209
+ M++ Y ++A G+ EK +++
Sbjct: 593 INVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILT 652
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ + G P+ ++YN++I + G+ EA + EM+ G P+ + YN V + +
Sbjct: 653 EIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNS 712
Query: 270 KLAEAHEVIRHMVEKG 285
EA E++R+MV +G
Sbjct: 713 MFEEAIELVRYMVTQG 728
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 122/316 (38%), Gaps = 35/316 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG T+N LI G G +++ F + + F P ++N +L
Sbjct: 374 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGL 433
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+++M GY P+ TY ++ + R G D ++ M +G PD TYN
Sbjct: 434 DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 493
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD------ 174
+L L +G + A L M+E P +++L+ + A LD K D
Sbjct: 494 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553
Query: 175 -----------------------------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
E+ K C D+ M++ Y + K +
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE 613
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ M + TYNS++ + G ++ ++ E++S G P+ YNT++
Sbjct: 614 KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY 673
Query: 266 RNAGKLAEAHEVIRHM 281
G++ EA + M
Sbjct: 674 GRKGQMKEASRLFSEM 689
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 102 LLDEMGRSGFSPDFHT------YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH--- 152
LLD+ GR+ D + ++ LG +P AAL L+ +E+ + VLH
Sbjct: 84 LLDDPGRATSPRDLLSGLPAPELAAVVGALGSRGQPGAALAALHAARELHGE-GVLHHPR 142
Query: 153 -FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
T + ++RAG L D A G PD YT +++++ AG A +F M
Sbjct: 143 VLATAIRVMARAGRLAEASALLD--AAPG--PDAGAYTALVSAFSRAGRFRDAVAVFRRM 198
Query: 212 ITKGQLPNVFTYNSMIRGFC-MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ G P + TYN ++ + MA + E ++ M+ G P+ YNTL+S R
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 258
Query: 271 LAEAHEVIRHMVEKG 285
EA +V M G
Sbjct: 259 YKEAAQVFDEMKASG 273
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 4/159 (2%)
Query: 51 ILHALLGI----RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+L+A++ I R + +E + M + TYN +M RLG ++ +L E+
Sbjct: 595 VLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEI 654
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
SG PD ++YN +++ G+ + A L + MK G P V+ + +
Sbjct: 655 KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMF 714
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ M +GC P+ Y ++ Y G+L A+
Sbjct: 715 EEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N+++ E G + VE K F P SYNA+L L +++ +E + +M
Sbjct: 182 NLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVR 241
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P++ T+N ++ R G +Q H L +M G +PD Y ++ + K
Sbjct: 242 VGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEV 301
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A ++L+ M G P+V+ + T++ GL A + + EM + C D V + +++
Sbjct: 302 ANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVD 361
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G +++ +L + M+ G +P+V TY ++I GFC G DEA ++K M + GC P
Sbjct: 362 FFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKP 421
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y ++ L A + +A E+I HM+++G
Sbjct: 422 NTISYTIVLKGLCRAERWVDAQELISHMIQQG 453
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 140/305 (45%), Gaps = 6/305 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P TFN LI GL +V E + P Y I+ +
Sbjct: 239 MVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGH 298
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++ + +M G P+++ YN V+ + ++ LL EM + D T+NI
Sbjct: 299 HEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNI 358
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + LL M E G P V+ +TT+++G + G +D M+ G
Sbjct: 359 LVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACG 418
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + YT+++ A AQ+L MI +G LPN T+N++I C G ++A
Sbjct: 419 CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAI 478
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
++K+M GC+P+ + Y+T++ L AGK EA E++ M+ KG Y + S
Sbjct: 479 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASAL 538
Query: 295 KRYKR 299
R R
Sbjct: 539 SREGR 543
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 114/224 (50%), Gaps = 1/224 (0%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++IE + +QM + G PD++TY V+ + G +D+ LL M G P+ +Y I+
Sbjct: 371 RVIE-LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIV 429
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L + ++ + A L++HM + G P+ + F TL++ + + G ++ +M GC
Sbjct: 430 LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGC 489
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD++ Y+ +I AG+ E+A +L + MI KG PN Y+SM G+ D+
Sbjct: 490 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 549
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M ++ + +YN ++S+L + A + +MV G
Sbjct: 550 MFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNG 593
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G T+ +I + GL + V +P SY +L L +
Sbjct: 379 MLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAER 438
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M +G P+ +T+N ++ + G ++Q LL +M +G SPD +Y+
Sbjct: 439 WVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYST 498
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ LGK K AL LLN M G P+ + ++++ LSR G D FD + +
Sbjct: 499 VIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDAT 558
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D Y +I+S E ++A D F M++ G +PN TY +IRG G EA
Sbjct: 559 VRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQ 618
Query: 241 TMMKEMESR 249
++ E+ SR
Sbjct: 619 DLLSELCSR 627
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 1/295 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + MS G P+ ++Y IV+ R + L+ M + G P+ T+N
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + K A+ LL M G P ++ ++T++DGL +AG + + M NKG
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + Y+ M ++ G +K +FD + + YN++I C + D A
Sbjct: 524 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAI 583
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE-KGKYIHLVSKF 294
M S GC PN Y L+ L + G + EA +++ + + HLV F
Sbjct: 584 DFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKHLVRHF 638
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 90/208 (43%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ TY ++ + G + +LDEM G + +++L +G +A+
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + G + ++ + G +D ++ + GC PD+V Y ++
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A + ++L M+ G PNV T+N++I C G F++ + +M GC P+ +
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G A++++ M G
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYG 313
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ L+ L AG D + VV Y MI Y AG++ A+ L +
Sbjct: 46 RLSALIRSLCAAGRTADAARALDTAGDAA---GVVAYNAMIAGYCRAGQVAAARRLAAAV 102
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
PN +TY ++R C G +A T++ EM RGC
Sbjct: 103 PVP---PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGC 139
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I S AAG A D T G V YN+MI G+C AG+ A + +
Sbjct: 48 SALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPV 104
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN Y +V +L G +A+A V+ M +G
Sbjct: 105 ---PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRG 138
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 149/285 (52%), Gaps = 1/285 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+E G T++ LI ++ + ++ K R +Y+ ++ LL + +
Sbjct: 235 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 294
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V +QM D G PD +TYN ++ ++ +L + LL EM +GF P TY L
Sbjct: 295 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 354
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA-NKG 180
H L + + A+ +L++M G P+ + +++++DGL +AG + +F++MA ++
Sbjct: 355 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P V+ Y+ +I AG++++A + + MI G++P+V T++ +I G C AG+ D
Sbjct: 415 VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 474
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M RGC P+ + Y TLV L A ++ EA ++ + M G
Sbjct: 475 ELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDG 519
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 148/289 (51%), Gaps = 8/289 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I GF T T++ LI C EV K++E P +YN +++ALLG
Sbjct: 93 IHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGR---GCAPNAVTYNTLVNALLGQ 149
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFH 116
+ K + +QM+ G P+++T+ +++ + G+++ R++DEM SG SPD
Sbjct: 150 GRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVI 209
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+N +L L K + L A N+ E G P+V+ ++TL+DGLS+ +D +M
Sbjct: 210 TFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC + V Y+ ++ + G +E A + M G LP+ TYN++I GF +
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRL 329
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA +++EM G +P+ + Y TL L +G+ EA E++ +M +G
Sbjct: 330 REAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 148/298 (49%), Gaps = 9/298 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHAL 55
M NG P TF ++I C GE+ A +VV+ I+S L P ++N++L L
Sbjct: 162 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGL---SPDVITFNSVLDGL 218
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ V+++ + G P+++TY+ ++ ++ K+D+ +LL +M G +
Sbjct: 219 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 278
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ ++ L K + A+ +L M++ G P + + TL+DG + L E
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G P VV YT + +G ++A ++ D M +G PN TY+S++ G C AG+
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398
Query: 236 FDEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++M P+ + Y+ L+ L AGK+ EA+E + M+ G+ +V+
Sbjct: 399 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVT 456
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 135/278 (48%), Gaps = 1/278 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T++ ++ +VG V + + P +YN ++ ++
Sbjct: 269 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 328
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M + G+ P ++TY + R G+ D+ +LD M G +P+ TY+
Sbjct: 329 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 388
Query: 121 LLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K + AL M ++ P V+ ++ L+DGL +AG +D F + M
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +PDVV ++++I AG ++ +LF GM +G +P++ TY +++ C A + DEA
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ ++M S G +P+ T++ L + +A +
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 123/230 (53%), Gaps = 5/230 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++QM D+ PD++TY ++ + ++ + + L +E G P TYN ++ L
Sbjct: 17 LFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLC 76
Query: 127 KGDKPLAALNLLNHMK-EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + AL L + M GF P+V+ ++TL+DGL R +D +EMA +GC P+
Sbjct: 77 KCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNA 136
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++ + + G ++A L + M G P + T+ +I+G C G+ + A ++ E
Sbjct: 137 VTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDE 196
Query: 246 M---ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M ES G +P+ + +N+++ L ++ +AH V + +E+G ++V+
Sbjct: 197 MFMIES-GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVT 245
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 124/253 (49%), Gaps = 3/253 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y A++ L R+ K ++++ +G P ++TYN ++ + G+++ L
Sbjct: 28 PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTL 87
Query: 103 LDEMG-RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
D+M GF P TY+ L+ L + + LL M G P+ + + TL++ L
Sbjct: 88 YDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALL 147
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG--MITKGQLPN 219
G ++MA GC P+++ + ++I GE+E A + D MI G P+
Sbjct: 148 GQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPD 207
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V T+NS++ G C + +A + K RGC PN + Y+TL+ L K+ EA +++
Sbjct: 208 VITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLA 267
Query: 280 HMVEKGKYIHLVS 292
MVE G + V+
Sbjct: 268 KMVELGCRANTVT 280
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 84/169 (49%), Gaps = 1/169 (0%)
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K K A+ L M + P V+ + L+DGL + + F+E KGC P
Sbjct: 5 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 64
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGM-ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
VV Y MI G +E A L+D M I G P V TY+++I G C + D+ C ++
Sbjct: 65 VVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLL 124
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+EM RGC PN + YNTLV+ L G+ EA ++ M G L++
Sbjct: 125 EEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELIT 173
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 3/194 (1%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K+D+ L +M PD TY L+ LGK + A +L + G P+V+ +
Sbjct: 10 KVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYN 69
Query: 155 TLMDGLSRAGNLDACKYFFDEMA-NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
T++DGL + G ++ +D+MA + G P VV Y+ +I E++K L + M
Sbjct: 70 TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G PN TYN+++ G+ EA +++++M + GC P + + ++ L G++
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189
Query: 274 AHEVIRH--MVEKG 285
A V+ M+E G
Sbjct: 190 AFRVVDEMFMIESG 203
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 8/227 (3%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
VGL R+++E F P +Y + H L ++ + M+ G AP+ +T
Sbjct: 333 VGLLREMLE-------AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAIT 385
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
Y+ ++ + G++ + ++M R +P Y+ L+ L K K A L M
Sbjct: 386 YSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERM 445
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G P V+ F+ L++GL AG +D F MA +GC+PD+V Y ++ A +
Sbjct: 446 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRV 505
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++A DLF M + G P+ T +MI G + ++A + E S
Sbjct: 506 DEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDEENS 552
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 147/276 (53%), Gaps = 6/276 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N ++ C G++ A +V++R ++ + P +Y ++ A +
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCY---PDVITYTILIEATCRDSGVGHAMKLL 262
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M D G PD++TYN+++ + G+LD+ + L++M SG P+ T+NI+L +
Sbjct: 263 DEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST 322
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + A LL M GF PSV+ F L++ L R G L ++M GC P+ + Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + ++++A + + M+++G P++ TYN+M+ C GK ++A ++ ++ S
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+GC+P + YNT++ L AGK +A +++ M K
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C GE+ A V++R + P +YN IL +L + K V
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM------SVSPDVVTYNTILRSLCDSGKLKQAMEVL 227
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M PD++TY I++ A R + +LLDEM G +PD TYN+L++ + K
Sbjct: 228 DRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ LN M G P+V+ ++ + G + +M KG P VV +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I G L +A D+ + M G PN +YN ++ GFC K D A ++ M S
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RGC P+ + YNT+++ L GK+ +A E++ + KG
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 142/268 (52%), Gaps = 10/268 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV- 67
T+ ILI C VG A K+++ + P +YN +++ + ++ +L E +
Sbjct: 241 TYTILIEATCRDSGVGHAMKLLDEM---RDRGCTPDVVTYNVLVNGI--CKEGRLDEAIK 295
Query: 68 -YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
M G P+++T+NI++ + G+ +LL +M R GFSP T+NIL++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+++L M + G P+ L + L+ G + +D + + M ++GC PD+V
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y M+T+ G++E A ++ + + +KG P + TYN++I G AGK +A ++ EM
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
++ P+ + Y++LV L GK+ EA
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 133/275 (48%), Gaps = 6/275 (2%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G+ A K++E S P +YN ++ + V +MS +
Sbjct: 148 CRLGKTRKAAKILEILEGSGAV---PDVITYNVMISGYCKAGEINNALSVLDRMS---VS 201
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++TYN ++ + GKL Q +LD M + PD TY IL+ + A+ L
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M++ G P V+ + L++G+ + G LD F ++M + GC P+V+ + +++ S +
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G A+ L M+ KG P+V T+N +I C G A ++++M GC PN L
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L+ K+ A E + MV +G Y +V+
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVT 416
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 3/217 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PDI+ ++ RLGK + ++L+ + SG PD TYN+++ K
Sbjct: 126 ENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKA 185
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL++L+ M P V+ + T++ L +G L D M + C PDV+ Y
Sbjct: 186 GEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY 242
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + + A L D M +G P+V TYN ++ G C G+ DEA + +M S
Sbjct: 243 TILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS 302
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + +N ++ ++ + G+ +A +++ M+ KG
Sbjct: 303 SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 137/293 (46%), Gaps = 16/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M +G T NI++ C+ G A K++ ++ F P ++N +++
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK---GFSPSVVTFNILINFLCR 356
Query: 54 -ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
LLG R ++E +M G P+ L+YN ++ + K+D+ L+ M G
Sbjct: 357 KGLLG-RAIDILE----KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
PD TYN +L L K K A+ +LN + G P ++ + T++DGL++AG
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKL 471
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
DEM K PD + Y+ ++ G++++A F G PN T+NS++ G C
Sbjct: 472 LDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCK 531
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + D A + M +RGC PN Y L+ L G EA E++ + KG
Sbjct: 532 SRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D + N L ++ G+ L +M G P ++ TTL+ G R G
Sbjct: 102 DVESNNHLRQMVRTGELE-EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ + G +PDV+ Y VMI+ Y AGE+ A + D M P+V TYN+++R C +
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDS 217
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHMVEKG 285
GK +A ++ M R C P+ + Y L+ + R++G + A +++ M ++G
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG-VGHAMKLLDEMRDRG 269
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G L+ F + M G +PD++ T +I + G+ KA + + + G +P+V
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN MI G+C AG+ + A +++ M +P+ + YNT++ +L ++GKL +A EV+ M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 282 VEKGKYIHLVS 292
+++ Y +++
Sbjct: 231 LQRDCYPDVIT 241
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 97/255 (38%), Gaps = 76/255 (29%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ GF + TFNILI C G +G A ++E+ + +P SYN +LH
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ---HGCQPNSLSYNPLLHGFCK 391
Query: 58 IRQY-KLIEW----------------------------------VYQQMSDEGYAPDILT 82
++ + IE+ + Q+S +G +P ++T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN V+ + GK + +LLDEM PD TY+ L+ L + K A+ + +
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFE 511
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLD------------ACK-------------------- 170
+G P+ + F ++M GL ++ D CK
Sbjct: 512 RMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAK 571
Query: 171 ---YFFDEMANKGCM 182
+E+ NKG M
Sbjct: 572 EALELLNELCNKGLM 586
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V A KV + + +P YNA++ + +M + G A
Sbjct: 192 CKVGRVDEAVKVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 249
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TYN+++ A + G+ + + L++EMG G +PD TYNIL++ K AL +
Sbjct: 250 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 309
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+M G +V+ +T L+ LS+ G + FDE +G PD+V Y +I S+
Sbjct: 310 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 369
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+G +++A ++ M K P+ TYN+++RG C+ G+ DEA ++ EM RG P+ +
Sbjct: 370 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL+S G + +A + M+ KG
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKG 457
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 47 SYNAILHALL----GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
+YN ++HAL G Y+L+E +M +G APD+ TYNI++ + G + + +
Sbjct: 254 TYNLLVHALFMDGRGTEAYELVE----EMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 309
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M R G TY L++ L K + L + G P ++ + L++ S
Sbjct: 310 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 369
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+GN+D EM K PD V Y ++ G +++A+ L D M +G P++ T
Sbjct: 370 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+ M G +A + EM ++G NP L YN L+ L G+ +A +++ MV
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 489
Query: 283 EKG------KYIHLV 291
E G YI L+
Sbjct: 490 ENGITPDDSTYISLI 504
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 126/265 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T T+N+L+ G + E + P +YN +++
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 302
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +++ MS G ++TY ++ A + G++ + +L DE R G PD YN
Sbjct: 303 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 362
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ A ++ M++ P + + TLM GL G +D + DEM +G
Sbjct: 363 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 422
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I+ Y G+++ A + + M+ KG P + TYN++I+G C G+ D+A
Sbjct: 423 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 482
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
M+KEM G P+ Y +L+ L
Sbjct: 483 NMVKEMVENGITPDDSTYISLIEGL 507
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
T+NI++ GK + LL +M R P+ TYN ++ + AAL+++ M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 171
Query: 142 KEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAG 199
+E G P+ + T++ G + G +D FDEM KG P+ V Y +I Y G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L+ A D M+ +G V TYN ++ M G+ EA +++EM +G P+ YN
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L++ G + +A E+ +M +G +V+
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+LL +L L + MK + S L+ L A F +M
Sbjct: 52 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAF----ALFADMFR 107
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ +M+ +AG+ +A +L M PN TYN++I GFC G+
Sbjct: 108 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQA 163
Query: 239 ACTMMKEMESR-GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +M+EM R G PN Y T++S G++ EA +V M+ KG+
Sbjct: 164 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 212
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 6/152 (3%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI T G + A +++ K ++ P +YN ++ L + + +
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDEARKLID 416
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M++ G PD++TYN ++ G + R+ +EM GF+P TYN L+ L K
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 476
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ A N++ M E G P + +L++GL+
Sbjct: 477 QGDDAENMVKEMVENGITPDDSTYISLIEGLT 508
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L +C G V ARK+++ + +P +YN ++ K +
Sbjct: 394 TYNTLMRGLCLLGRVDEARKLIDEMTER---GIQPDLVTYNTLISGYSMKGDVKDALRIR 450
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G+ P +LTYN ++ + G+ D ++ EM +G +PD TY L+ L
Sbjct: 451 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510
Query: 129 DK 130
D+
Sbjct: 511 DE 512
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 144/283 (50%), Gaps = 9/283 (3%)
Query: 6 FPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T+N LIC G++ A ++ I L N P +++ ++ AL ++ K
Sbjct: 182 FPNVI-TYNTLICAFCLAGQLMGAFSLLHEMI---LKNINPDVYTFSILIDAL--CKEGK 235
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ ++ M G P++ +YNI++ + ++D+ LL EM PD TYN L+
Sbjct: 236 NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLI 295
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K + +ALNL+N M G V+ +T+L+D L + NLD F +M +G
Sbjct: 296 DGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQ 355
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P + YT +I G L+ AQ+LF ++ KG +V+TY MI G C G FDEA +
Sbjct: 356 PTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAI 415
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ME GC PN + + ++ +L + +A +++ M+ KG
Sbjct: 416 KSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 8/284 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ T+ L +C GEV +K++ K F+ + SY +L+ L +
Sbjct: 75 GYXPNTITWTTLMKGLCLKGEV---KKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGET 131
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + + + D P+++ Y+ ++ + +++ + L EM P+ TYN L
Sbjct: 132 RCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTL 191
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + + A +LL+ M +P V F+ L+D L + G K F M G
Sbjct: 192 ICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGV 249
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+V Y +MI +++A +L M+ K +P+ TYNS+I G C +G+ A
Sbjct: 250 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 309
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M EM RG + + Y +L+ L L +A + M E+G
Sbjct: 310 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 353
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 119/254 (46%), Gaps = 39/254 (15%)
Query: 75 GYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
GY P+ +T+ +M C K + KL FH D++ F + +Y LL+ L K +
Sbjct: 75 GYXPNTITWTTLMKGLCLKGEVKKLLHFH---DKVVAQAFQTNQVSYGTLLNGLCKTGET 131
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ LL +++ P+V+ ++ ++DGL + ++ + EM + P+V+ Y +
Sbjct: 132 RCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTL 191
Query: 192 ITSYIAAGEL---------------------------------EKAQDLFDGMITKGQLP 218
I ++ AG+L + A+ +F M+ G P
Sbjct: 192 ICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVNP 251
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV++YN MI G C + DEA +++EM + P+ + YN+L+ L +G++ A ++
Sbjct: 252 NVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLM 311
Query: 279 RHMVEKGKYIHLVS 292
M +G+ +V+
Sbjct: 312 NEMHHRGQPADVVT 325
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 97/220 (44%), Gaps = 6/220 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G ++NI+I C C V A ++ + N P +YN+++ L
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHK---NMVPDTVTYNSLIDGLCK 300
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G D++TY ++ A + LD+ L +M G P +T
Sbjct: 301 SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYT 360
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L KG + A L H+ G V +T ++ GL + G D +M
Sbjct: 361 YTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 420
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ GC+P+ V + ++I S E +KA+ L MI KG L
Sbjct: 421 DNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ I+ +N ++ + +L L +M G + T +IL++ + +
Sbjct: 6 HTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSF 65
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+LL + ++G+ P+ + +TTLM GL G + +F D++ + + V Y ++
Sbjct: 66 SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGL 125
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
GE A L + + PNV Y+++I G C +EA + EM++R PN
Sbjct: 126 CKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNV 185
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ YNTL+ AG+L A ++ M+ K
Sbjct: 186 ITYNTLICAFCLAGQLMGAFSLLHEMILK 214
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 152/334 (45%), Gaps = 63/334 (18%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+ C G++G ++++ I + P + +N+++HA R Y ++
Sbjct: 316 TYRILLSGCLRKGQLGRCKRILSMMITEGCY---PNREIFNSLIHAYCKSRDYSYAYKLF 372
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYR--------------------------------- 92
++M G P L YNI + C+
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432
Query: 93 -----LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
GK DQ +++ EM GF PD TY+ ++ L K A +L MK G
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
PSV +T L+D +AG + + +FDEM +KGC P+VV YT +I +Y+ A ++ A +L
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM---------------ESRGCN 252
F+ M+ +G PNV TY ++I G C AG+ ++AC + M + C
Sbjct: 553 FEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCE 612
Query: 253 -PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + Y LV L A ++ EAHE++ M+ G
Sbjct: 613 GPNVITYGALVDGLCKANRVKEAHELLDTMLAHG 646
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 57/349 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG + T+ ILI C G + ARK + + P +Y A++HA L
Sbjct: 486 MKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHK---GCTPNVVTYTALIHAYLK 542
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD-------------------- 97
+Q + + +++ M EG P+++TY ++ + G+++
Sbjct: 543 AKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDK 602
Query: 98 -------------------------------QFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ H LLD M G P+ Y+ ++
Sbjct: 603 YFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFC 662
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A + M E G+ P++ +++ +D L + LD +M C P+VV
Sbjct: 663 KIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVV 722
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT M+ G+ ++A L M KG PNV TY +MI GF +GK ++ + ++M
Sbjct: 723 IYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDM 782
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
S+GC PNF+ Y L+++ + G L EA++++ M + H++S K
Sbjct: 783 CSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRK 831
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 125/240 (52%), Gaps = 2/240 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P + Y+A++ I + + + V+ +MS+ GY+P++ TY+ + ++ +LD +
Sbjct: 648 EPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLK 707
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+L +M + +P+ Y ++ L K K A L+ M+E G +P+V+ +T ++DG
Sbjct: 708 VLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFG 767
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
++G ++ C F +M +KGC P+ + Y V+I + G L++A L D M ++
Sbjct: 768 KSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHIL 827
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++ +I GF + +F + ++ E+ P +Y L+ N AG+L A +++ +
Sbjct: 828 SHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEI 885
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 2/196 (1%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P TYN ++ R KLD + + EM F D +T + + L KG
Sbjct: 201 RLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGG 260
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A +L++ ++ F P + + ++ GL A + M + C+P+VV Y
Sbjct: 261 KCREAFDLIDEAED--FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYR 318
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++++ + G+L + + + MIT+G PN +NS+I +C + + A + K+M
Sbjct: 319 ILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKC 378
Query: 250 GCNPNFLVYNTLVSNL 265
GC P +LVYN + ++
Sbjct: 379 GCQPGYLVYNIFIGSV 394
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 124/316 (39%), Gaps = 43/316 (13%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
R N L+ C G +E + K F ++P + +YNA++ L + V ++
Sbjct: 177 RLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKRE 236
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M + D T + + + GK + L+DE F PD YN ++ L +
Sbjct: 237 MLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASL 294
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+++L+ M+ P+V+ + L+ G R G L CK M +GC P+ +
Sbjct: 295 FEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNS 354
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI----------------------- 227
+I +Y + + A LF MI G P YN I
Sbjct: 355 LIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYS 414
Query: 228 ------------------RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
R C AGKFD+A ++ EM +G P+ Y+ ++ L +A
Sbjct: 415 EMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDAS 474
Query: 270 KLAEAHEVIRHMVEKG 285
K+ +A + M G
Sbjct: 475 KVEKAFSLFEEMKRNG 490
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 126/286 (44%), Gaps = 4/286 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G ++ +I ++G + E F K + P +Y++ + L +
Sbjct: 642 MLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNR 701
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L+ V +M + P+++ Y ++ ++GK D+ ++L+ +M G +P+ TY
Sbjct: 702 LDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTA 761
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ GK K L L M G P+ + + L++ G LD DEM
Sbjct: 762 MIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTY 821
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
++ + +I + + E + L D + +P Y +I + AG+ + A
Sbjct: 822 WPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVAL 879
Query: 241 TMMKEMESRGCN--PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+++E+ S + N +Y +L+ NL +A K+ +A E+ M+ K
Sbjct: 880 DLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISK 925
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 2/154 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L +K+ G+ PS + L+ RA LD EM + + D +
Sbjct: 195 ALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAY 254
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S G+ +A DL D + +P+ YN M+ G C A F+EA ++ M S C P
Sbjct: 255 SLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIP 312
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
N + Y L+S G+L ++ M+ +G Y
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCY 346
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/241 (19%), Positives = 111/241 (46%), Gaps = 4/241 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+EN + ++ ++G + + +K + P +Y A++ +
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +++ M +G AP+ +TY +++ G LD+ ++LLDEM ++ + ++
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRK 831
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ G + + ++ LL+ + E P + L+D +AG L+ +E+++
Sbjct: 832 IIE--GFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSP 889
Query: 181 --CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ + Y +I + A +++KA +L+ MI+K +P + +I+G K+ E
Sbjct: 890 SHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQE 949
Query: 239 A 239
A
Sbjct: 950 A 950
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NIL+ C G+V A+ V+ +K+ + +P +Y+ ++ + + K + V+
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACV---KPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS G PD+ TY I++ + +D+ L EM + P TY+ L+ L K
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +L++ M++ G V+ +++L+DGL + G+LD F++M ++ P++ +
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+ AQ++F ++TKG NV+TYN MI G C G +EA TM+ +ME
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + T++ L + +A +++R M+ +G
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 146/289 (50%), Gaps = 10/289 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
++ GF ++ LI ++G R ++ R I +L +P YN I+ A+
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLT--KPDVVMYNTIIDAMC-- 210
Query: 59 RQYKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+Y+L+ Y +M+ +G + D++TYN ++ +GKL + LL+EM +P+
Sbjct: 211 -KYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNV 269
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+TYNIL+ L K K A ++L M + P V+ ++TLMDG + ++ F+
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ G PDV YT++I + +++A +LF M K +P + TY+S+I G C +G+
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ EM RG + + Y++L+ L G L A + M ++
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 140/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+P T N LI C G+V A ++ + F+ + SY +++ +
Sbjct: 120 ILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ---GFQLNQVSYATLINGVCK 176
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + +++ PD++ YN ++ A + + + + L EM G S D T
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K A+ LLN M +P+V + L+D L + G + K M
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDV+ Y+ ++ Y E++KAQ +F+ M G P+V TY +I GFC D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + KEM + P + Y++L+ L +G+++ ++I M ++G+ +++
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVIT 411
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 120/237 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+N IL + ++ Y + ++ +G PD++T NI++ +G++ +L ++
Sbjct: 61 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G+ PD T N L+ L + AL+ + + GF + + + TL++G+ + G+
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 180
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A F ++ + PDVV Y +I + + +A LF M KG +V TYN++
Sbjct: 181 RAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
I GFC+ GK EA ++ EM + NPN YN LV L GK+ EA V+ M++
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI + + + + F + N P +Y++++ L + +
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYV 393
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M D G D++TY+ ++ + G LD+ L ++M P+ T+ ILL
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L KG + A + + G+ +V + +++G + G L+ +M + GC+P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ +I + E +KA+ L MI +G L
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+ QF+R+L +P +N +L K A++L + ++ G P ++
Sbjct: 44 VSQFNRML----CMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ G + ++ +G PD V +I G+++KA D ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
N +Y ++I G C G A +++++ R P+ ++YNT++ + ++EA+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219
Query: 276 EVIRHMVEKG 285
+ M KG
Sbjct: 220 GLFSEMAVKG 229
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 69/148 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++ N M + P ++ F ++D ++ + + KG PD++ ++I
Sbjct: 43 AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ + ++ +G P+ T N++I+G C+ G+ +A ++ ++G
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 162
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N + Y TL++ + G A + +R +
Sbjct: 163 NQVSYATLINGVCKIGDTRAAIKFLRKI 190
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T++ LI + G + + F K K RP ++ +L L +
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V+Q + +GY ++ TYN+++ + G L++ +L +M +G P+ T+
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGF 146
++ L K D+ A LL M G
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGL 545
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N+D F+ M P ++ + ++ S+ A L + KG P++ T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I FC G+ +++ ++ RG P+ + NTL+ L G++ +A ++ +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 285 GKYIHLVS 292
G ++ VS
Sbjct: 159 GFQLNQVS 166
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI + T+NILI VG +K + F + + P +YN ++ A + +
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + MS +G P++++YN+++ R G + + +L+EMG GF+PD TYN
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL+ K AL + M G PSV+ +T L++ + +A NL+ FFD+M +G
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 384
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ YT +I + G L +A + + M G P+V TYN+ I G C+ + +EA
Sbjct: 385 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 444
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM +G P+ + Y+T++S G+L A ++ + MVEKG
Sbjct: 445 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG T+N LI C G + A ++ + + SK +P SYN I++ L
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL-KSMSSK--GMQPNLISYNVIINGLCR 296
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + ++M +G+ PD +TYN ++ + G Q + EM R+G SP T
Sbjct: 297 EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 356
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ + K A+ + M+ G P+ +TTL+DG SR G L+ +EM
Sbjct: 357 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 416
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P VV Y I + +E+A + M+ KG P+V +Y+++I GFC G+ D
Sbjct: 417 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 476
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M +EM +G +P+ + Y++L+ L +L EA ++ + M++ G
Sbjct: 477 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 4/281 (1%)
Query: 13 FNILICTCGEVGL-ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+ ++ + G V L A +V I+S++ P +YN ++ + + + + +M
Sbjct: 184 LDAIVRSRGSVKLSAEEVYREMIRSRV---SPNVYTYNILIRGFCSVGELQKGLGCFGEM 240
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+++TYN ++ A ++G++D+ LL M G P+ +YN++++ L +
Sbjct: 241 ERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSM 300
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L M GF P + + TL++G + GN EM G P VV YT +
Sbjct: 301 KEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTAL 360
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I S A L +A + FD M +G PN TY ++I GF G +EA ++ EM G
Sbjct: 361 INSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 420
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+P+ + YN + ++ EA V++ MVEKG +VS
Sbjct: 421 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVS 461
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR-QYKL- 63
+ +++ F++++ + + + + V +K F P SYN++L A++ R KL
Sbjct: 138 YNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLS 197
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
E VY++M +P++ TYNI++ +G+L + EM R+G P+ TYN L+
Sbjct: 198 AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLID 257
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K + A LL M G P+++ + +++GL R G++ +EM KG P
Sbjct: 258 AYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP 317
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D V Y ++ Y G +A + M+ G P+V TY ++I C A + A
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M RG PN Y TL+ G L EA+ ++ M E G
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESG 419
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 15/303 (4%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G RT+ LI GL + + F P +YNA +H + + +
Sbjct: 384 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 443
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V Q+M ++G APD+++Y+ ++ R G+LD+ ++ EM G SPD TY+ L+
Sbjct: 444 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 503
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + + A +L M ++G P +TTL++ G+L+ + DEM +KG +PD
Sbjct: 504 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPD 563
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS---------------MIRG 229
V Y+V+I +A+ L +I + +P+ TY++ +I+G
Sbjct: 564 AVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKG 623
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
FCM G EA + + M R P VYN ++ G L +A + + M+ G H
Sbjct: 624 FCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPH 683
Query: 290 LVS 292
V+
Sbjct: 684 TVT 686
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G ++N++I G ++ E + F P + +YN +L+
Sbjct: 275 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 334
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G +P ++TY ++ + + L++ D+M G P+ TY
Sbjct: 335 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 394
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A +LN M E GF PSV+ + + G ++ EM KG
Sbjct: 395 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 454
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y+ +I+ + GEL++A + M+ KG P+ TY+S+I+G C + EAC
Sbjct: 455 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 514
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM G P+ Y TL++ G L +A + M+ KG
Sbjct: 515 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 559
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 143 bits (361), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 5/284 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ENG T+ + C G+ A ++ + ++ + +P Y+AI+ L
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM--EEISHIKPNVVIYSAIIDGLCK 265
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ +M D+G P+I+TYN ++ G+ RLL EM SP+ T
Sbjct: 266 DGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVT 325
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + + +++DG + LDA + F MA
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PDV +T +I Y A ++ +L M +G + N TYN++I GFC+ G +
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + ++M S G P+ + NTL+ L + GKL +A E+ + M
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 48/321 (14%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWV 67
+F ILI C+C ++ A + K P ++ +LH L L R + ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTK---LGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+Q PD+LT+ +M R G++ + LLD M +G PD TY + + K
Sbjct: 175 HQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 128 GDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------ 180
++ALNLL M+E+ P+V+ ++ ++DGL + G F EM +KG
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289
Query: 181 ---CM--------------------------PDVVCYTVMITSYIAAGELEKAQDLFDGM 211
CM P+VV Y +I +++ G+ +A +L+D M
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +G +PN TYNSMI GFC + D A M M ++GC+P+ + TL+ A ++
Sbjct: 350 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409
Query: 272 AEAHEVIRHMVEKGKYIHLVS 292
+ E++ M +G + V+
Sbjct: 410 DDGMELLHEMPRRGLVANTVT 430
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 11/264 (4%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
FI+ + P +YN ++ ++ + + Q+M + +P+++TYN ++ A +
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
GK + L DEM G P+ TYN ++ K D+ AA ++ M G P V
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
FTTL+DG A +D EM +G + + V Y +I + G+L A DL MI
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-----------GCNPNFLVYNTL 261
+ G P++ T N+++ G C GK +A M K M+ G P+ L YN L
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ L N GK EA E+ M +G
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRG 539
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 46/338 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E T+N LI + G + E + + P +YN+++ +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ M+ +G +PD+ T+ ++ ++D LL EM R G + TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+H AAL+L M G P ++ TL+DGL G L DA + F
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 173 --------------------------------------FDEMANKGCMPDVVCYTVMITS 194
++EM ++G +PD + Y+ MI
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
L++A +F M +K PNV T+N++I G+C AG+ D+ + EM RG +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++Y TL+ R G + A ++ + M+ G Y ++
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 651
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 42/288 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + +N ++ A++ + + L+ +YQ+M + DI ++ I++
Sbjct: 70 SDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSC 129
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+ LLH L + AL+L + + P VL F
Sbjct: 130 SKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTF 185
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPD----------------------------- 184
TTLM+GL R G + D M G PD
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEE 245
Query: 185 -------VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
VV Y+ +I G + +LF M KG PN+ TYN MI GFC++G++
Sbjct: 246 ISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWS 305
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++EM R +PN + YN L++ GK EA E+ M+ +G
Sbjct: 306 AAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G++ A + ++ I S + P + N +L L
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC---PDIVTCNTLLDGLCD 475
Query: 58 IRQYKLIEWVYQQMSDE-----------GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ K +++ M G PD+LTYNI++C GK + L +EM
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + M F P+V+ F TL++G +AG +
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + D + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 596 DDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 655
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ GF + + A M+++++
Sbjct: 656 LTGFWSKEELERAVAMLEDLQ 676
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 108/246 (43%), Gaps = 11/246 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++H + + QQM G PDI+T N ++ GKL + M
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 107 GRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+S G PD TYNIL+ L K L A L M G P + +++
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++DGL + LD F M +K P+VV + +I Y AG ++ +LF M +G
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ + Y ++I GF G + A + +EM S G P+ + +++ + +L A
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 669
Query: 276 EVIRHM 281
++ +
Sbjct: 670 AMLEDL 675
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++ +N +M A R+ + D L +M R D +++ IL+ K AL+
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ ++G P V+ FTTL+ GL + F ++ C PDV+ +T ++
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFL 256
G + +A L D M+ G P+ TY + + G C G A ++++ME PN +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+Y+ ++ L G+ +++H + M +KG + ++V+
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 4/195 (2%)
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
Y + L+ L +M RS P +N L+ + + ++P ++L M+
Sbjct: 55 GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ FT L+ L F ++ G PDVV +T ++ + +A DLF
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ P+V T+ +++ G C G+ EA ++ M G P+ + Y T V +
Sbjct: 175 HQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230
Query: 269 GKLAEAHEVIRHMVE 283
G A ++R M E
Sbjct: 231 GDTVSALNLLRKMEE 245
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M PSV+ F LM + R D + +M K D+ +T++I
Sbjct: 65 AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ + +L A F + G P+V T+ +++ G C+ + EA + ++ C P
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRP 180
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ L + TL++ L G++ EA ++ MVE G
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENG 212
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 149/277 (53%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NIL+ C G+V A+ V+ +K+ + +P +Y+ ++ + + K + V+
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACV---KPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS G PD+ TY I++ + +D+ L EM + P TY+ L+ L K
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +L++ M++ G V+ +++L+DGL + G+LD F++M ++ P++ +
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+ AQ++F ++TKG NV+TYN MI G C G +EA TM+ +ME
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + T++ L + +A +++R M+ +G
Sbjct: 508 NGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 142/287 (49%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI ++G R ++ K +P Y+ I+ AL +
Sbjct: 155 LLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALC---K 211
Query: 61 YKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y+L+ Y +M+ +G + D++TY+ ++ GKL + LL+EM +P+ +T
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT 271
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K K A ++L M + P V+ ++TLMDG + ++ F+ M+
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDV YT++I + +++A +LF M K +P + TY+S+I G C +G+
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ EM RG + + Y++L+ L G L A + M ++
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQ 438
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+P T N LI C G+V A ++ + F+ + SY +++ +
Sbjct: 120 ILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ---GFQLNQVSYATLINGVCK 176
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + +++ P++ Y+ ++ A + + + + L EM G S D T
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L++ K A+ LLN M +P+V + L+D L + G + K M
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDV+ Y+ ++ Y E++KAQ +F+ M G P+V TY +I GFC D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + KEM + P + Y++L+ L +G++ ++I M ++G+ +++
Sbjct: 357 EALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVIT 411
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+N IL + ++ Y + ++ +G PD++T NI++ +G++ +L ++
Sbjct: 61 QFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G+ PD T N L+ L + AL+ + + GF + + + TL++G+ + G+
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 180
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
++ + P+V Y+ +I + + +A LF M KG +V TY+++
Sbjct: 181 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
I GFC+ GK EA ++ EM + NPN YN LV L GK+ EA V+ M++
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLK 297
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 95/213 (44%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI + + + + F + N P +Y++++ L + +
Sbjct: 334 GVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYV 393
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M D G D++TY+ ++ + G LD+ L ++M P+ T+ ILL
Sbjct: 394 WDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDG 453
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L KG + A + + G+ +V + +++G + G L+ +M + GC+P+
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPN 513
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ +I + E +KA+ L MI +G L
Sbjct: 514 AFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+ QF+R+L +P +N +L K A++L + ++ G P ++
Sbjct: 44 VSQFNRML----CMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ G + ++ +G PD V +I G+++KA D ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
N +Y ++I G C G A ++++++ R PN +Y+T++ L ++EA+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219
Query: 276 EVIRHMVEKG 285
+ M KG
Sbjct: 220 GLFSEMTVKG 229
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/148 (19%), Positives = 70/148 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++ N M + P ++ F ++D ++ + + KG PD++ ++I
Sbjct: 43 AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ + ++ +G P+ T N++I+G C+ G+ +A ++ ++G
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 162
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N + Y TL++ + G A +++R +
Sbjct: 163 NQVSYATLINGVCKIGDTRGAIKLLRKI 190
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T++ LI + G + + F K K RP ++ +L L +
Sbjct: 400 MRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGR 459
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V+Q + +GY ++ TYN+++ + G L++ +L +M +G P+ T+
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFET 519
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGF 146
++ L K D+ A LL M G
Sbjct: 520 IIIALFKKDENDKAEKLLRQMIARGL 545
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N+D F+ M P ++ + ++ S+ A L + KG P++ T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I FC G+ +++ ++ RG P+ + NTL+ L G++ +A ++ +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 285 GKYIHLVS 292
G ++ VS
Sbjct: 159 GFQLNQVS 166
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 154/328 (46%), Gaps = 41/328 (12%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--- 54
M +G T+N L +C G+ ARK+ + +K L +P +Y +LH
Sbjct: 103 MCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSMVKRGL---KPDITTYGTLLHGYAS 159
Query: 55 ---------LLGI---------------------RQYKLIE--WVYQQMSDEGYAPDILT 82
LL + +Q K+ E V+ +M +G P+ +
Sbjct: 160 KGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVN 219
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
Y V+ +LG+LD ++M G +P+ Y L+H L DK A L+ +
Sbjct: 220 YRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEIL 279
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G +P+++ F T++D L + G + K FD + + G PDV+ Y+ +I Y AG+++
Sbjct: 280 DQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMD 339
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A L GM++ G P+ TY+++I G+C + ++A + KEMES G NP+ + YN ++
Sbjct: 340 GAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIIL 399
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
L + A A E+ + E G + L
Sbjct: 400 HGLFRTRRTAAAKELYARITESGTQLEL 427
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 136/274 (49%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N ++ G + K + F K P +YN+++ L + ++ M
Sbjct: 79 TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKIFDSM 138
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PDI TY ++ G L + H LL M ++G D H +NIL+ K +K
Sbjct: 139 VKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTKQEKV 198
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ + + M++ G P+ +++ T++DGL + G LD F++M +KG P+VV YT +
Sbjct: 199 DEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVVYTSL 258
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + + EKA++L ++ +G PN+ +N+++ C G+ E+ + + G
Sbjct: 259 IHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLGHIGV 318
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NP+ + Y+TL+ AGK+ A +++ MV G
Sbjct: 319 NPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG 352
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG FNILIC + +VV F K + P +Y ++ L + +
Sbjct: 173 MVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGR 232
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++QM D+G P+++ Y ++ A K ++ L+ E+ G +P+ +N
Sbjct: 233 LDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNT 292
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L L K + + + L + + +G +P V+ ++TL+DG AG +D M + G
Sbjct: 293 ILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVG 352
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V Y+ +I Y +E A LF M + G P++ TYN ++ G + A
Sbjct: 353 LKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAK 412
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ + G YN ++ + L
Sbjct: 413 ELYARITESGTQLELSTYNIILMDFAKTNSL 443
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 116/266 (43%), Gaps = 13/266 (4%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SYN I+ L Y +M D +PD +TYN ++ A + +D+ +
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M P+ TYN ++H + A+ + M G +P V+ + +LMD L +
Sbjct: 69 LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + FD M +G PD+ Y ++ Y + G L + DL M+ G +
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N +I + K DE + +M +G PN + Y T++ L G+L +A M+
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244
Query: 283 EKG---------KYIHLVSKFKRYKR 299
+KG IH + + ++++
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEK 270
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 70/142 (49%), Gaps = 32/142 (22%)
Query: 176 MANKG-CMPDVVCYTVMITSYIAAGELEKA----QDLFD--------------GMITKGQ 216
MA+ G C PDVV Y +I G+++KA ++ D ++K Q
Sbjct: 1 MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 217 -------------LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
+PN FTYNS++ G+C +G+ ++A + ++M S G P+ + YN+L+
Sbjct: 61 AMDRAMEVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMD 120
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L GK EA ++ MV++G
Sbjct: 121 YLCKNGKCTEARKIFDSMVKRG 142
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 142/284 (50%), Gaps = 5/284 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ENG T+ + C G+ A ++ + ++ + +P Y+AI+ L
Sbjct: 208 MVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM--EEISHIKPNVVIYSAIIDGLCK 265
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ +M D+G P+I+TYN ++ G+ RLL EM SP+ T
Sbjct: 266 DGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVT 325
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + + +++DG + LDA + F MA
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PDV +T +I Y A ++ +L M +G + N TYN++I GFC+ G +
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + ++M S G P+ + NTL+ L + GKL +A E+ + M
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 148/321 (46%), Gaps = 48/321 (14%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWV 67
+F ILI C+C ++ A + K P ++ +LH L L R + ++
Sbjct: 118 SFTILIKCFCSCSKLPFALSTFGKLTK---LGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+Q PD+LT+ +M R G++ + LLD M +G PD TY + + K
Sbjct: 175 HQICR-----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 128 GDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------ 180
++ALNLL M+E+ P+V+ ++ ++DGL + G F EM +KG
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289
Query: 181 ---CM--------------------------PDVVCYTVMITSYIAAGELEKAQDLFDGM 211
CM P+VV Y +I +++ G+ +A +L+D M
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +G +PN TYNSMI GFC + D A M M ++GC+P+ + TL+ A ++
Sbjct: 350 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409
Query: 272 AEAHEVIRHMVEKGKYIHLVS 292
+ E++ M +G + V+
Sbjct: 410 DDGMELLHEMPRRGLVANTVT 430
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 124/264 (46%), Gaps = 11/264 (4%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
FI+ + P +YN ++ ++ + + Q+M + +P+++TYN ++ A +
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
GK + L DEM G P+ TYN ++ K D+ AA ++ M G P V
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
FTTL+DG A +D EM +G + + V Y +I + G+L A DL MI
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-----------GCNPNFLVYNTL 261
+ G P++ T N+++ G C GK +A M K M+ G P+ L YN L
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ L N GK EA E+ M +G
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRG 539
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 42/288 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + +N ++ A++ + + L+ +YQ+M + DI ++ I++
Sbjct: 70 SDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSC 129
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+ LLH L + AL+L + + P VL F
Sbjct: 130 SKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTF 185
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPD----------------------------- 184
TTLM+GL R G + D M G PD
Sbjct: 186 TTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEE 245
Query: 185 -------VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
VV Y+ +I G + +LF M KG PN+ TYN MI GFC++G++
Sbjct: 246 ISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWS 305
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++EM R +PN + YN L++ GK EA E+ M+ +G
Sbjct: 306 AAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRG 353
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 141/338 (41%), Gaps = 46/338 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E T+N LI + G + E + + P +YN+++ +
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ M+ +G +PD+ T+ ++ ++D LL EM R G + TYN
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+H AAL+L M G P ++ TL+DGL G L DA + F
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493
Query: 173 --------------------------------------FDEMANKGCMPDVVCYTVMITS 194
++EM ++G +PD + Y+ MI
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
L++A +F M +K PNV T+N++I G+C AG+ D+ + EM RG +
Sbjct: 554 LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVAD 613
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++Y TL+ R G + A ++ + M+ G Y ++
Sbjct: 614 AIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTIT 651
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G++ A + ++ I S + P + N +L L
Sbjct: 419 MPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC---PDIVTCNTLLDGLCD 475
Query: 58 IRQYKLIEWVYQQMSDE-----------GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ K +++ M G PD+LTYNI++C GK + L +EM
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 535
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + M F P+V+ F TL++G +AG +
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 595
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + D + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 596 DDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 655
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ GF + + A M+++++
Sbjct: 656 LTGFWSKEELERAVAMLEDLQ 676
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 11/239 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++H + + QQM G PDI+T N ++ GKL + M
Sbjct: 430 TYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 107 GRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+S G PD TYNIL+ L K L A L M G P + +++
Sbjct: 490 QKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++DGL + LD F M +K P+VV + +I Y AG ++ +LF M +G
Sbjct: 550 MIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRG 609
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ + Y ++I GF G + A + +EM S G P+ + +++ + +L A
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERA 668
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 104/216 (48%), Gaps = 5/216 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++ +N +M A R+ + D L +M R D +++ IL+ K AL+
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALST 138
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ ++G P V+ FTTL+ GL + F ++ C PDV+ +T ++
Sbjct: 139 FGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCR 194
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFL 256
G + +A L D M+ G P+ TY + + G C G A ++++ME PN +
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+Y+ ++ L G+ +++H + M +KG + ++V+
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVT 290
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 4/195 (2%)
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
Y + L+ L +M RS P +N L+ + + ++P ++L M+
Sbjct: 55 GSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC 114
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ FT L+ L F ++ G PDVV +T ++ + +A DLF
Sbjct: 115 DIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLF 174
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ P+V T+ +++ G C G+ EA ++ M G P+ + Y T V +
Sbjct: 175 HQICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKM 230
Query: 269 GKLAEAHEVIRHMVE 283
G A ++R M E
Sbjct: 231 GDTVSALNLLRKMEE 245
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M PSV+ F LM + R D + +M K D+ +T++I
Sbjct: 65 AIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 124
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ + +L A F + G P+V T+ +++ G C+ + EA + ++ C P
Sbjct: 125 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRP 180
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ L + TL++ L G++ EA ++ MVE G
Sbjct: 181 DVLTFTTLMNGLCREGRVVEAVALLDRMVENG 212
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 5/284 (1%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C GE+ A +VV + + N +P ++N++++ L +
Sbjct: 40 GCAPNAVTYNTLVAAFCRAGELDGAERVVS--LMREEGNAKPNLVTFNSMVNGLCKAGRM 97
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+ +M EG APD+++YN ++ ++G L + + EM + G PD T+ L
Sbjct: 98 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 157
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H K A+ L+ M+E G + + FT L+DG + G LD +EM G
Sbjct: 158 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 217
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VVCY +I Y G ++ A++L M K P+V TY+++I G+C G D A
Sbjct: 218 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 277
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M +G P+ + Y++L+ L +L +A E+ +M++ G
Sbjct: 278 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 321
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 122/243 (50%), Gaps = 1/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN ++ AL + + V M G AP+ +TYN ++ A R G+LD R+
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 103 LDEMGRSGFS-PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ M G + P+ T+N +++ L K + A + + M G P V+ + TL+ G
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G L F EM +G +PDVV +T +I + AG LE+A L M +G N
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+ ++I GFC G D+A ++EM G P+ + YN L++ G++ A E+IR M
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247
Query: 282 VEK 284
K
Sbjct: 248 EAK 250
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 117/216 (54%), Gaps = 1/216 (0%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G AP++ TYNI++ A G+L++ ++ +M +G +P+ TYN L+ + +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 131 PLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A +++ M+E G P+++ F ++++GL +AG ++ + FDEM +G PDVV Y
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ Y G L ++ +F M +G +P+V T+ S+I C AG ++A ++ +M R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G N + + L+ G L +A + M + G
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCG 216
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 41/305 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN ++ C G + ARKV + ++ L P SYN +L + V+
Sbjct: 83 TFNSMVNGLCKAGRMEGARKVFDEMVREGL---APDVVSYNTLLSGYCKVGCLHESLAVF 139
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-------------------FHRLLD----- 104
+M+ G PD++T+ ++ A + G L+Q F L+D
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 199
Query: 105 -----------EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
EM + G P YN L++ K + A L+ M+ P V+ +
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 259
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+T++ G + GNLD+ +M KG +PD + Y+ +I L A +LF+ M+
Sbjct: 260 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 319
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+ FTY ++I G C G ++A ++ EM +G P+ + Y+ L++ L + + E
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379
Query: 274 AHEVI 278
AH ++
Sbjct: 380 AHRLL 384
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 21/303 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TF LI C G + A VE K +P YNA+++
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC---GIQPSVVCYNALINGYCK 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + L + ++M + PD++TY+ ++ ++G LD +L +M + G PD T
Sbjct: 234 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L + + A L +M ++G P +TTL+DG + GN++ DEM
Sbjct: 294 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN------------- 224
KG +PDVV Y+V+I + ++A L + + +P+ Y+
Sbjct: 354 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 413
Query: 225 --SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++++GFCM G EA + + M R + VY+ L+ G + +A + M+
Sbjct: 414 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473
Query: 283 EKG 285
G
Sbjct: 474 RSG 476
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G P+V Y +++ + A G LE+A + M G PN TYN+++ FC AG+
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 236 FDEACTMMKEMESRG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D A ++ M G PN + +N++V+ L AG++ A +V MV +G +VS
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 158/327 (48%), Gaps = 35/327 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG T+N ++ G ++ + K + P +Y+++++ L +
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G PDI TY ++ G L + H LLD M R+G PD H +NI
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K +K A+ + + M++ G +P+V+ + T++D L ++G++D +F++M ++G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 181 CMPDVVCYTVM-----------------------------------ITSYIAAGELEKAQ 205
P+++ YT + I S+ G + +++
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G P++ TYN++I G C+AGK DEA ++ M S G P+ + Y TL++
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ +A + + MV G ++++
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIIT 588
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SYN +L+ Y +M D G PD++TY+ ++ A + +D+ +
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M ++G PD TYN +LH +P A+ L M+ G +P+V+ +++LM+ L +
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + FD M +G PD+ Y ++ Y G L + L D M+ G P+
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N +I + K D+A + +M G NPN + Y T++ L +G + +A M+
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 283 EKG 285
++G
Sbjct: 439 DEG 441
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 118/218 (54%), Gaps = 8/218 (3%)
Query: 74 EGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+G+ D +T+ ++ CA R D +L M G PD +YN LL L ++
Sbjct: 121 KGFRVDAITFTPLLKGLCADKRTS--DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENR 178
Query: 131 PLAALNLLNHMKEV---GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL LL+ M + G P V+ + T+++G + G+ D + EM ++G +PDVV
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVT 238
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ +I + A ++KA ++ + M+ G +P+ TYNS++ G+C +G+ EA +K+M
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S G PN + Y++L++ L G+ EA ++ M ++G
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+P + +N ++ A + V+ +M G P+++ Y V+ + G +D
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++M G +P+ Y L+H L DK A L+ M + G + + F +++D
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G + + FD M G PD++ Y +I AG++++A L M++ G P++
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY ++I G+C + D+A + KEM S G +PN + YN ++ L + + A A E+
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 281 MVEKGKYIHL 290
+ + G + L
Sbjct: 612 ITKSGTQLEL 621
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++I+ AL + V M G PD +TYN ++ G+ +
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G P+ TY+ L++ L K + A + + M + G +P + + TL+ G +
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G PD + ++I +Y ++++A +F M G PNV
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G D+A ++M G PN +VY +L+ L K +A E+I M+
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Query: 283 EKG 285
++G
Sbjct: 474 DRG 476
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNILIC + + + F K + P Y ++ L
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++QM DEG P+I+ Y ++ K D+ L+ EM G + +N
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + + + L + M +G P ++ + TL+DG AG +D M + G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I Y ++ A LF M++ G PN+ TYN +++G + A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
+ + G YN ++ L
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGL 631
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 6/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +YN ++
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYNTLIDGCCL 528
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PDI+TY ++ R+ ++D L EM SG SP+ T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + AA L + + G + + ++ GL + D F +
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G +++A+DLF G +P+V TY+ M G +
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 708
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
E + ME GC+ + + N++V L G + A
Sbjct: 709 ELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 149/285 (52%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI + T+NILI VG +K + F + + P +YN ++ A + +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + MS +G P++++YN+++ R G + + +L+EMG GF+PD TYN
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL+ K AL + M G PSV+ +T L++ + +A NL+ FFD+M +G
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ YT +I + G L +A + + M G P+V TYN+ I G C+ + +EA
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM +G P+ + Y+T++S G+L A ++ + MVEKG
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG T+N LI C G + A ++ + + SK +P SYN I++ L
Sbjct: 36 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLL-KSMSSK--GMQPNLISYNVIINGLCR 92
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + ++M +G+ PD +TYN ++ + G Q + EM R+G SP T
Sbjct: 93 EGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVT 152
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ + K A+ + M+ G P+ +TTL+DG SR G L+ +EM
Sbjct: 153 YTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMT 212
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P VV Y I + +E+A + M+ KG P+V +Y+++I GFC G+ D
Sbjct: 213 ESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELD 272
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M +EM +G +P+ + Y++L+ L +L EA ++ + M++ G
Sbjct: 273 RAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 320
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ + + + + +M G P+++TYN ++ A ++G++D+ LL M
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ +YN++++ L + A +L M GF P + + TL++G + GN
Sbjct: 72 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
EM G P VV YT +I S A L +A + FD M +G PN TY ++
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I GF G +EA ++ EM G +P+ + YN + ++ EA V++ MVEKG
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251
Query: 287 YIHLVS 292
+VS
Sbjct: 252 APDVVS 257
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 15/303 (4%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G RT+ LI GL + + F P +YNA +H + + +
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V Q+M ++G APD+++Y+ ++ R G+LD+ ++ EM G SPD TY+ L+
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 299
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + + A +L M ++G P +TTL++ G+L+ + DEM +KG +PD
Sbjct: 300 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPD 359
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS---------------MIRG 229
V Y+V+I +A+ L +I + +P+ TY++ +I+G
Sbjct: 360 AVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKG 419
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
FCM G EA + + M R P VYN ++ G L +A + + M+ G H
Sbjct: 420 FCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPH 479
Query: 290 LVS 292
V+
Sbjct: 480 TVT 482
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 130/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G ++N++I G ++ E + F P + +YN +L+
Sbjct: 71 MSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGN 130
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G +P ++TY ++ + + L++ D+M G P+ TY
Sbjct: 131 FHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTT 190
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A +LN M E GF PSV+ + + G ++ EM KG
Sbjct: 191 LIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKG 250
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y+ +I+ + GEL++A + M+ KG P+ TY+S+I+G C + EAC
Sbjct: 251 LAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEAC 310
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM G P+ Y TL++ G L +A + M+ KG
Sbjct: 311 DLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKG 355
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%)
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
MI PNV+TYN +IRGFC G+ + EME GC PN + YNTL+ G+
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
+ EA +++ M KG +L+S
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLIS 82
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 132/259 (50%), Gaps = 6/259 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ + VYQ M + GY PD ++Y+I++ ++GKLD+ ++L EM
Sbjct: 47 AFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM 106
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P Y+ L+ L K + A +L + M G P L F L+ GL +AG +
Sbjct: 107 VMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKV 166
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F +M GC P+V Y V++ ++G+LE+A LF M + P+V TYN++
Sbjct: 167 KDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTL 226
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG- 285
+ C A + +E C + + M + G PN + ++TL+ L G+L +A EV M+E G
Sbjct: 227 LDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGC 286
Query: 286 -----KYIHLVSKFKRYKR 299
Y L+S R ++
Sbjct: 287 KPNKYTYTTLISGLCRAEK 305
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 3/258 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
AR+V + ++S ++P SY+ ++H L I + + +M G P + Y+
Sbjct: 64 AREVYQHMVES---GYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + ++D L DEM R G PD + L+ L + K A M + G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P+V + L+ GL +G L+ F EM + C PDVV Y ++ + A +E+
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF+ M G +PNV T++++I G C G+ ++A + M GC PN Y TL+S L
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGL 300
Query: 266 RNAGKLAEAHEVIRHMVE 283
A K+ +A E+ M +
Sbjct: 301 CRAEKVIQARELFEKMTQ 318
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 130/246 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y++I+ +L+ + + V ++M G PD+ +N VM R +++ + M
Sbjct: 12 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
SG+ PD +Y+IL+H L K K +L +L+ M G PS+ +++L+ L++A +
Sbjct: 72 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D FDEM G PD + + +I AG+++ A + F M G PNV YN +
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ G C +G+ ++A T+ EM+S C+P+ + YNTL+ + A ++ E ++ M G
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251
Query: 287 YIHLVS 292
++++
Sbjct: 252 VPNVIT 257
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 138/281 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G+ +++ILI ++G + ++ + + P +Y++++ AL R+
Sbjct: 71 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARR 130
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M G+ PD L + ++ + GK+ +M + G P+ YN+
Sbjct: 131 VDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNV 190
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH L + A L MK P V+ + TL+D + +A ++ F+ M G
Sbjct: 191 LLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAG 250
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ ++ +I GELEKA ++F M+ G PN +TY ++I G C A K +A
Sbjct: 251 YVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQAR 310
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ ++M P+ + YN+L++ G + EA ++ R M
Sbjct: 311 ELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 109/211 (51%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D+ A ++ TY+ ++ + + K ++ +++L+EM +G +PD +N ++ + +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A + HM E G+ P + + L+ GL++ G LD EM +G P + Y+
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ + A ++ A LFD MI G P+ + +I G C AGK +A K+M G
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
C PN VYN L+ L ++G+L +A+ + M
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEM 211
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 137/289 (47%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G +N+L+ C+ G++ A + F + K + P +YN +L A+
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTL---FAEMKSHSCSPDVVTYNTLLDAVCK 232
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + +++ M GY P+++T++ ++ R G+L++ + M +G P+ +T
Sbjct: 233 ARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYT 292
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + +K + A L M + P + + +L+ G + G++D + + EM+
Sbjct: 293 YTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMS 352
Query: 178 -NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P +V + +I + G+L +A +L M TKG + TY +I G A K
Sbjct: 353 GGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKL 412
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
DEA + K+M + + + + V L G + +A+ V + G
Sbjct: 413 DEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSG 461
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 101/213 (47%), Gaps = 7/213 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+ LI C +V AR++ E+ ++ + P +YN+++
Sbjct: 281 MLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACI---PPDAVAYNSLIAGYCK 337
Query: 58 IRQYKLIEWVYQQMSD-EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
E +Y++MS G P I+T+N ++ +LGKL + + L+ EMG G + D
Sbjct: 338 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSC 397
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY IL+ L + K AL + M+E F + + + GL + GN+D F+
Sbjct: 398 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 457
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
G +P+ + ++ S I G +E AQ L +
Sbjct: 458 RKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M++ +V +++++ L + + +EM GC PDV + ++ + +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+EKA++++ M+ G P+ +Y+ +I G GK DE+ ++ EM RG P+ Y++
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKY 287
LV L A ++ A + M+ G +
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHH 147
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 158/327 (48%), Gaps = 35/327 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG T+N ++ G ++ + K + P +Y+++++ L +
Sbjct: 262 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGR 321
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G PDI TY ++ G L + H LLD M R+G PD H +NI
Sbjct: 322 STEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNI 381
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K +K A+ + + M++ G +P+V+ + T++D L ++G++D +F++M ++G
Sbjct: 382 LICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG 441
Query: 181 CMPDVVCYTVM-----------------------------------ITSYIAAGELEKAQ 205
P+++ YT + I S+ G + +++
Sbjct: 442 LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 501
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G P++ TYN++I G C+AGK DEA ++ M S G P+ + Y TL++
Sbjct: 502 KLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGY 561
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ +A + + MV G ++++
Sbjct: 562 CRVSRMDDALALFKEMVSSGVSPNIIT 588
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 118/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SYN +L+ Y +M D G PD++TY+ ++ A + +D+ +
Sbjct: 199 PDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEV 258
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M ++G PD TYN +LH +P A+ L M+ G +P+V+ +++LM+ L +
Sbjct: 259 LNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCK 318
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + FD M +G PD+ Y ++ Y G L + L D M+ G P+
Sbjct: 319 NGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHV 378
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N +I + K D+A + +M G NPN + Y T++ L +G + +A M+
Sbjct: 379 FNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMI 438
Query: 283 EKG 285
++G
Sbjct: 439 DEG 441
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 118/218 (54%), Gaps = 8/218 (3%)
Query: 74 EGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+G+ D +T+ ++ CA R D +L M G PD +YN LL L ++
Sbjct: 121 KGFRVDAITFTPLLKGLCADKRTS--DAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENR 178
Query: 131 PLAALNLLNHMKEV---GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL LL+ M + G P V+ + T+++G + G+ D + EM ++G +PDVV
Sbjct: 179 SQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVT 238
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ +I + A ++KA ++ + M+ G +P+ TYNS++ G+C +G+ EA +K+M
Sbjct: 239 YSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMR 298
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S G PN + Y++L++ L G+ EA ++ M ++G
Sbjct: 299 SDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 120/250 (48%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+P + +N ++ A + V+ +M G P+++ Y V+ + G +D
Sbjct: 372 IQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAM 431
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++M G +P+ Y L+H L DK A L+ M + G + + F +++D
Sbjct: 432 LYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSH 491
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G + + FD M G PD++ Y +I AG++++A L M++ G P++
Sbjct: 492 CKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDI 551
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY ++I G+C + D+A + KEM S G +PN + YN ++ L + + A A E+
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611
Query: 281 MVEKGKYIHL 290
+ + G + L
Sbjct: 612 ITKSGTQLEL 621
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++I+ AL + V M G PD +TYN ++ G+ +
Sbjct: 234 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 293
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G P+ TY+ L++ L K + A + + M + G +P + + TL+ G +
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G PD + ++I +Y ++++A +F M G PNV
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G D+A ++M G PN +VY +L+ L K +A E+I M+
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473
Query: 283 EKG 285
++G
Sbjct: 474 DRG 476
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNILIC + + + F K + P Y ++ L
Sbjct: 367 MVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGS 426
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++QM DEG P+I+ Y ++ K D+ L+ EM G + +N
Sbjct: 427 VDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNS 486
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + + + L + M +G P ++ + TL+DG AG +D M + G
Sbjct: 487 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVG 546
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I Y ++ A LF M++ G PN+ TYN +++G + A
Sbjct: 547 VKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 606
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
+ + G YN ++ L
Sbjct: 607 ELYVSITKSGTQLELSTYNIILHGL 631
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 117/277 (42%), Gaps = 6/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +YN ++
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYNTLIDGCCL 528
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PDI+TY ++ R+ ++D L EM SG SP+ T
Sbjct: 529 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 588
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + AA L + + G + + ++ GL + D F +
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G +++A+DLF G +P+V TY+ M G +
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 708
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
E + ME GC+ + + N++V L G + A
Sbjct: 709 ELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 143 bits (360), Expect = 1e-31, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 8/287 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-PD 79
G + R+ + F + K +P +YN+++ L+ QY+ + +Y +MS EG+ PD
Sbjct: 1160 GNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPD 1219
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+TY+ ++ A +LG+ D +LL+EM G P Y +L+ + K + AL+L
Sbjct: 1220 TVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFE 1279
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M+ P V +T L+ GL +AG +D +FF EM +GC PD V MI AG
Sbjct: 1280 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG 1339
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKEMESRGCNPNFLVY 258
L+ A LF M T +P+V TYN++I+ F + E + + M+ G +P+ Y
Sbjct: 1340 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 1399
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ L+ ++ +A ++ M EKG Y L+ + KR
Sbjct: 1400 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 1446
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEWVYQQM 71
N +I G+ G ++ F + + P +YN I+ AL R ++ W +++M
Sbjct: 1329 NNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSW-FERM 1387
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G +P TY+I++ + ++++ LL+EM GF P Y L+ LGK +
Sbjct: 1388 KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 1447
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L +KE S + ++ L +AG LD FDEM GC PDV Y +
Sbjct: 1448 DLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNAL 1507
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
++ G L++A M G +P++ +YN ++ G G A M+ M+
Sbjct: 1508 MSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTV 1567
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + YNT++ L +AG EA ++++ M
Sbjct: 1568 RPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597
Score = 103 bits (256), Expect = 1e-19, Method: Composition-based stats.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 38/288 (13%)
Query: 36 SKLFNFRPFKNSYNAILHALLGIRQY----KLIE-------------------------- 65
+K N+ ++Y A++H L + QY K+I+
Sbjct: 1104 AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAK 1163
Query: 66 ------WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS-PDFHTY 118
++ Q+ P YN ++ G+ ++ H+L +EM G PD TY
Sbjct: 1164 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTY 1223
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L+ K + +A+ LLN MKE+G P+ +T L+ + + F+EM +
Sbjct: 1224 SALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH 1283
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ C PDV YT +I AG +++A F M +G P+ N+MI AG+ D+
Sbjct: 1284 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDD 1343
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKG 285
A + +EME+ C P+ + YNT++ L + + +E M E G
Sbjct: 1344 AMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 1391
Score = 58.9 bits (141), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 72/160 (45%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G+ G + F + P +YNA++ L
Sbjct: 1459 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 1518
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++M + G PDI +YNI++ + G + +L M +S PD +YN +L
Sbjct: 1519 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 1578
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L A L+ M +GF+ ++ ++++++ + +
Sbjct: 1579 GALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 51/117 (43%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N L+ G+ + + + + P NSYN IL+ L + M
Sbjct: 1504 YNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK 1563
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
PD+++YN V+ A G ++ +L+ EM GF D TY+ +L +GK D
Sbjct: 1564 QSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD 1620
Score = 37.7 bits (86), Expect = 6.3, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++NI++ + G + +E K RP SYN +L AL
Sbjct: 1527 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 1586
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++ + ++M+ G+ D++TY+ ++ A +GK+D H D+
Sbjct: 1587 FEEASKLMKEMNTLGFEYDLITYSSILEA---IGKVD--HEYTDQ 1626
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 138/262 (52%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
G +KV++ + ++ +P +YN+I+ L + E V ++M ++G PD + Y
Sbjct: 24 GELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY 83
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
++ +LG + ++L DEM + PDF Y ++ L + K + A + N M
Sbjct: 84 TTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFS 143
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G +P + +TTL+DG ++G ++ ++M G P+VV YT + G+++
Sbjct: 144 RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDT 203
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A +L M KG N+ TYNS++ G C +G +A +M+EME G P+ + + TL+
Sbjct: 204 ANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMD 263
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
G++ +AHE++R M+++G
Sbjct: 264 AYCKTGEMVKAHELLREMLDRG 285
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 119/218 (54%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G APD+++Y+ V+ G+L + +L+ EM G P+ +TYN ++ +L K K A
Sbjct: 5 GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+L M G P + +TTL+DG + GN+ A FDEM + +PD + YT +I
Sbjct: 65 ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICG 124
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G++ +A +F+ M ++G P+ TY ++I G+C +G+ ++A ++ +M G PN
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ Y L L G++ A+E++ M KG +++ +
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICT 222
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 129/251 (51%), Gaps = 2/251 (0%)
Query: 43 PFKNSYNAILHA-LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P SY+ +++ LG K+++ + Q+M +G P++ TYN ++ + GK+D R
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLI-QEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+L EM G PD Y L+ K AA L + M++ P + +T ++ GL
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G + F++M ++G PD V YT +I Y +GE+EKA L + M+ G PNV
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY ++ G C G+ D A ++ EM +G N YN+LV+ L +G + +A +++ M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 282 VEKGKYIHLVS 292
G Y ++
Sbjct: 247 EVAGMYPDTIT 257
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 131/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFN---ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N +L+C G+V A +V+ I + P Y ++ +
Sbjct: 40 GLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIV---PDTVVYTTLIDGFCKLGNI 96
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ +M + PD + Y V+C R GK+ + ++ ++M G PD TY L
Sbjct: 97 QAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTL 156
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K + A +L N M + G P+V+ +T L DGL + G +D EM KG
Sbjct: 157 IDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGL 216
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
++ Y ++ +G + +A L + M G P+ T+ +++ +C G+ +A
Sbjct: 217 QLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHE 276
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM RG P + +N L++ +G L + ++ M+EKG
Sbjct: 277 LLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKG 320
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C CG++ A KV + + P + +Y ++ + + ++ QM G
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGV---EPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL 181
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+++TY + +LG++D + LL EM G + TYN L++ L K A+
Sbjct: 182 TPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVK 241
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M+ G P + FTTLMD + G + EM ++G P V+ + V++ +
Sbjct: 242 LMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFC 301
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G LE + L M+ KG +PN TYNS+++ +C+ + K M +RG P+
Sbjct: 302 MSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSN 361
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ A + EA + + M EKG
Sbjct: 362 TYNILIKGHCKARNMKEAWFLHKEMAEKG 390
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ LI C GE+ A + + ++S L P +Y A+ L
Sbjct: 141 MFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGL---TPNVVTYTALADGLCK 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q + +M +G +I TYN ++ + G + Q +L++EM +G PD T
Sbjct: 198 LGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTIT 257
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + + A LL M + G P+V+ F LM+G +G L+ + M
Sbjct: 258 FTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWML 317
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG MP+ Y ++ Y + +++ GM +G +P+ TYN +I+G C A
Sbjct: 318 EKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMK 377
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + KEM +G N YN+++ K++EA E+ M +G
Sbjct: 378 EAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 5/284 (1%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C GE+ A +VV + + N +P ++N++++ L +
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVS--LMREEGNAKPNLVTFNSMVNGLCKAGRM 239
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+ +M EG APD+++YN ++ ++G L + + EM + G PD T+ L
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H K A+ L+ M+E G + + FT L+DG + G LD +EM G
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VVCY +I Y G ++ A++L M K P+V TY+++I G+C G D A
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M +G P+ + Y++L+ L +L +A E+ +M++ G
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 109/212 (51%), Gaps = 2/212 (0%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
GYAP + YN V+ A L R L M R G +P+ +TYNIL+ L + A
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMIT 193
+ ++ M+ G P+ + + TL+ RAG LD + M +G P++V + M+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
AG +E A+ +FD M+ +G P+V +YN+++ G+C G E+ + EM RG P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + +L+ AG L +A ++ M E+G
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERG 323
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 41/305 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN ++ C G + ARKV + ++ L P SYN +L + V+
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGL---APDVVSYNTLLSGYCKVGCLHESLAVF 281
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-------------------FHRLLD----- 104
+M+ G PD++T+ ++ A + G L+Q F L+D
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341
Query: 105 -----------EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
EM + G P YN L++ K + A L+ M+ P V+ +
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+T++ G + GNLD+ +M KG +PD + Y+ +I L A +LF+ M+
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+ FTY ++I G C G ++A ++ EM +G P+ + Y+ L++ L + + E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 274 AHEVI 278
AH ++
Sbjct: 522 AHRLL 526
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 21/303 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TF LI C G + A VE K +P YNA+++
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC---GIQPSVVCYNALINGYCK 375
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + L + ++M + PD++TY+ ++ ++G LD +L +M + G PD T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L + + A L +M ++G P +TTL+DG + GN++ DEM
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN------------- 224
KG +PDVV Y+V+I + ++A L + + +P+ Y+
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555
Query: 225 --SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++++GFCM G EA + + M R + VY+ L+ G + +A + M+
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Query: 283 EKG 285
G
Sbjct: 616 RSG 618
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G+ PSV + ++ LS A +L + + F M G P+V Y +++ + A G LE+A
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFLVYNTLVS 263
+ M G PN TYN+++ FC AG+ D A ++ M G PN + +N++V+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L AG++ A +V MV +G +VS
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVS 260
>gi|238480176|ref|NP_001154199.1| uncharacterized protein [Arabidopsis thaliana]
gi|223635643|sp|Q8LDU5.2|PP298_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g01400, mitochondrial; Flags: Precursor
gi|332656621|gb|AEE82021.1| uncharacterized protein [Arabidopsis thaliana]
Length = 466
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-- 61
+G+P T F LI E L KV+ F K FNF P N IL L+ R Y
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K E +++ G P+ +YN++M A L ++L +M PD +Y IL
Sbjct: 173 KAFE-LFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + + A+ LL+ M GF P L +TTL++ L R L M KGC
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y MI + A+ + D M++ G PN +Y ++I G C G FDE
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
++EM S+G +P+F V N LV + GK+ EA +V+ +++ G+ +H
Sbjct: 352 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 111/231 (48%), Gaps = 6/231 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G R++N+L+ C ++ +A ++ + ++ + P +SY ++ Q
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV---PDVDSYKILIQGFCRKGQ 240
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M ++G+ PD L+Y ++ + R +L + ++LL M G +PD YN
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + D+ + A +L+ M G P+ + + TL+ GL G D K + +EM +KG
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
P ++ + + G++E+A D+ + ++ G+ + T+ +I C
Sbjct: 361 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 134/288 (46%), Gaps = 1/288 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E+ P T F+ LI GE L K + F FN +P N IL L+ R Y
Sbjct: 104 ESSQPITPTLFSYLIKIYGEANLPDKALNTFYIMLQFNIKPLTKHLNRILDILVSHRNYL 163
Query: 63 LIEW-VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +++ G PD +YNI+M A G + + L ++M + PD +Y IL
Sbjct: 164 RPAFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRIL 223
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L + + A++L M GF P +TTL++ L R L M KGC
Sbjct: 224 MQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGC 283
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y +I + G A + D M G LPN+ +Y +++ G C G DEA
Sbjct: 284 NPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATK 343
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
++EM S+G +P+F V + LV N G++ EA V+ +E + H
Sbjct: 344 YVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHREAPH 391
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +L + G P + LM G++ F++M + +PD+ Y +++
Sbjct: 166 AFDLFKDAHKHGVFPDTKSYNILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQ 225
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ ++ A DLF+ M+ KG +P+ FTY +++ C K EA ++ M+ +GCNP
Sbjct: 226 ALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 285
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + YNT++ G+ +A +VI M G +LVS
Sbjct: 286 DIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVS 324
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 127/239 (53%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++H + + + K + M +GY PD+++Y+ V+ R G+LD+ +L++ M
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G P+ + Y ++ +L + K A + M G P + +TTL+DG + G++
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A FF EM ++ PDV+ YT +I+ + G++ +A LF M KG P+ T+ +
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 427
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+C AG +A + M GC+PN + Y TL+ L G L A+E++ M + G
Sbjct: 428 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ K++E + L +P Y +I+ L I + E + +M +G
Sbjct: 292 CRFGELDKVWKLIEVMKRKGL---KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y ++ + G + + EM +PD TY ++ + + A L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G +P + FT L++G +AG++ + M GC P+VV YT +I
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G+L+ A +L M G PN+FTYNS++ G C +G +EA ++ E E+ G N + +
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y TL+ +G++ +A E+++ M+ KG
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ M G +P+++TY ++ + G LD + LL EM + G P+ TYN +++ L
Sbjct: 443 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 502
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L+ + G + + +TTLMD ++G +D + EM KG P +V
Sbjct: 503 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 562
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ V++ + G LE + L + M+ KG PN T+NS+++ +C+ A + K+M
Sbjct: 563 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SRG P+ Y LV A + EA + + M KG
Sbjct: 623 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 661
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + LI C G++ A K F + + P +Y AI+
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKF---FYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I ++ +M +G PD +T+ ++ + G + R+ + M ++G SP+ T
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K +A LL+ M ++G P++ + ++++GL ++GN++ E
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G D V YT ++ +Y +GE++KAQ++ M+ KG P + T+N ++ GFC+ G +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ M ++G PN +N+LV L A + + M +G
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 49/294 (16%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
KV + I S F RP N ++ ++ + L+ + Y+ D G P + +++
Sbjct: 136 KVAQSLISS--FWERPKLNVTDSF------VQFFDLLVYTYK---DWGSDPRV--FDVFF 182
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG-DKPLAALNLLNHMKEVGF 146
G L + R+ ++M G + N+ L L K K A+ + EVG
Sbjct: 183 QVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGV 242
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK--- 203
+V + ++ + + G + + M KG PDV+ Y+ ++ Y GEL+K
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 204 --------------------------------AQDLFDGMITKGQLPNVFTYNSMIRGFC 231
A++ F MI +G LP+ Y ++I GFC
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G A EM SR P+ L Y ++S G + EA ++ M KG
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAI-----LHALLGI 58
N T T C GE+ A+++++ + L +P ++N + LH +L
Sbjct: 523 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL---QPTIVTFNVLMNGFCLHGMLED 579
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ KL+ W M +G AP+ T+N ++ L + +M G PD TY
Sbjct: 580 GE-KLLNW----MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K A L MK GF SV ++ L+ G + + FD+M
Sbjct: 635 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 694
Query: 179 KGCMPD 184
+G D
Sbjct: 695 EGLAAD 700
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G A TFN L+ C + A + + + P +Y ++
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV---GPDGKTYENLVKGHCK 643
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R K +++Q+M +G++ + TY++++ + K + + D+M R G + D
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKE 143
++ KG +P ++ ++ + E
Sbjct: 704 FDFFSDTKYKGKRPDTIVDPIDEIIE 729
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 152/314 (48%), Gaps = 25/314 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI GF T+ LI C G A +++ ++ N +P +YN I+ +L
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK---NCQPNVFAYNTIIDSLCK 213
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
RQ ++ +M +G +PDI TYN ++ A L + LL+EM S PD +
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ L K K A ++++ M + G +P+V+ +T LMDG +D FD M
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEK-------------------AQDLFDGMITKGQLP 218
KGCMP+V+ Y +I Y ++K A +FD M+ KG +P
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMP 393
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV +YN++I G+C + D+A + EM + P+ + Y+TL+ L + +L +A +
Sbjct: 394 NVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALF 453
Query: 279 RHMVEKGKYIHLVS 292
MV + +LV+
Sbjct: 454 HEMVACSQIPNLVT 467
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 130/250 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N +L ++ ++ + + + QM G P+I T +I++ + L ++ +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ + K AL+L + M GF P V+ + TL++GL +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M K C P+V Y +I S ++ +A +LF M+TKG P++FT
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I C ++ T++ EM P+ + +NT+V L GK+ EAH+V+ M+
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 283 EKGKYIHLVS 292
++G ++V+
Sbjct: 299 QRGVEPNVVT 308
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T +ILI C VG A V+ + +K +P ++ ++ + +
Sbjct: 91 GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILK---LGHQPDTATFTTLIRGICVEGKI 147
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M EG+ PD++TY ++ ++G RLL M + P+ YN +
Sbjct: 148 GEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A NL + M G P + + +L+ L +EM +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPDVV + ++ + G++ +A D+ D MI +G PNV TY +++ G C+ + DEA
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 242 MMKEMESRGCNPNFLVYNTLVS 263
+ M +GC PN + YNTL++
Sbjct: 328 VFDTMVCKGCMPNVISYNTLIN 349
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 25/307 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ L+ C E+ A KV + + P SYN +++
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM---PNVISYNTLINGYCK 353
Query: 58 IRQY-KLIEW------------------VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
I++ K I + V+ M +G P++++YN ++ ++ ++D+
Sbjct: 354 IQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 413
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L EM R PD TY+ L+H L ++ A+ L + M P+++ + L+D
Sbjct: 414 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 473
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + L + PD+ + I AGELE A+DLF + +KG P
Sbjct: 474 YLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQP 533
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V+TY+ MI G C G DEA + +EM+ GC N +YNT+ + + A +++
Sbjct: 534 DVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLL 593
Query: 279 RHMVEKG 285
+ MV +G
Sbjct: 594 QEMVARG 600
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +++ I++ +++ +M + PD +TY+ ++ + +L L EM
Sbjct: 397 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 456
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
P+ TY ILL L K A+ LL ++ DP + +DG+ RAG L
Sbjct: 457 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 516
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+A + F +++KG PDV Y++MI G L++A LF M G N YN++
Sbjct: 517 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 576
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
RGF + A +++EM +RG + + V L + G +++R+
Sbjct: 577 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRN 630
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A++ N M + PS + F L+ +++ + +M + G P++ ++I
Sbjct: 44 GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
S+ + A + ++ G P+ T+ ++IRG C+ GK EA + +M G
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFR 163
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL++ L G + A ++ MV+K
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 195
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Query: 135 LNLLNHMKEVG---FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L+LL H + F LHF T+ +S F+ M P V + +
Sbjct: 18 LSLLPHFLSLSHNRFHSKSLHFNTIDGAISS----------FNRMLRMQPPPSTVDFNKL 67
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+TS L M + G PN++T + +I FC + A +++ ++ G
Sbjct: 68 LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGH 127
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + TL+ + GK+ EA + M+ +G
Sbjct: 128 QPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161
>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 597
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 144/268 (53%), Gaps = 11/268 (4%)
Query: 17 ICTCGEVGLARKVVERFIK-SKLF--NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
+C G + +A K+ + + S L+ NF+P SY+ I+ AL R+ ++++M
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
+G P +++Y +M ++ RL +EM G P+ T+N+L+ VL K K +
Sbjct: 271 QGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIE 322
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +LL M + G P++L + +L++G G+L++ + F M +KGC PDV+CYTV+I
Sbjct: 323 AKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLIN 382
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y ++E+A L++GM+ G+ P+V TY +++ G GK +A + M+ G
Sbjct: 383 GYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPG 442
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ +Y ++ L G L EA E+ +
Sbjct: 443 DLYIYGIFLNGLCKNGCLFEAMELFNKL 470
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 20/292 (6%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G T NIL+ C VG V+ ++ + P +Y ++ L +
Sbjct: 125 SGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRR---GYIPDIVTYTTLIKGLCMEHR 181
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG------FSPD 114
++ +M G P+ +TY +M R G + +L EM F P
Sbjct: 182 ISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPV 241
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+Y+I++ L K + A +L MK G P+V+ +T+LM + K F+
Sbjct: 242 VISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFN 293
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM N+G P+VV + V+I G++ +A+DL + MI +G +PN+ TYNS+I GFC+ G
Sbjct: 294 EMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVG 353
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ A + M S+GC P+ + Y L++ K+ EA ++ M++ GK
Sbjct: 354 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 405
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 139/287 (48%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TFN+LI C G+V A+ ++E I+ + P +YN+++
Sbjct: 295 MVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIV---PNLLTYNSLIEGFCL 351
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M +G PD++ Y +++ + K+++ +L + M + G PD T
Sbjct: 352 VGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LL L +G K A L MK G + + ++GL + G L F+++
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ D+ C+ +I AG+LE A +LF+ + + P+V TYN MI FC G+
Sbjct: 472 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 531
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+A + ++ME GC P+ + Y TL+ + KL + E++ MV++
Sbjct: 532 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQR 578
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 68/135 (50%)
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + FT L+ GL++ + Y +++M G PD +++ + + +
Sbjct: 94 PPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAV 153
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
G++ +G +P++ TY ++I+G CM + +A + M+ GC PN + Y TL+ L
Sbjct: 154 MAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCR 213
Query: 268 AGKLAEAHEVIRHMV 282
G ++ A ++ + M+
Sbjct: 214 TGNISIALKLHQEML 228
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
DI +N ++ + GKL+ L +++ + PD TYNI++H +G + + A L
Sbjct: 478 DIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILF 537
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
M++ G P + + TL+ G + L+ M + DV
Sbjct: 538 QKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 9/114 (7%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
FN LI C G++ A ++ E+ + +L +P +YN ++H Q ++Q
Sbjct: 482 FNCLIDGLCKAGKLETAWELFEKLPQEEL---QPDVVTYNIMIHEFCRGGQVVKANILFQ 538
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+M G PD +TY ++ + KL++ LL M + S D NIL H
Sbjct: 539 KMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV---NILRH 589
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 146/284 (51%), Gaps = 5/284 (1%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C GE+ A +VV + + N +P ++N++++ L +
Sbjct: 182 GCAPNAVTYNTLVAAFCRAGELDGAERVVS--LMREEGNAKPNLVTFNSMVNGLCKAGRM 239
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+ +M EG APD+++YN ++ ++G L + + EM + G PD T+ L
Sbjct: 240 EGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSL 299
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H K A+ L+ M+E G + + FT L+DG + G LD +EM G
Sbjct: 300 IHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGI 359
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VVCY +I Y G ++ A++L M K P+V TY+++I G+C G D A
Sbjct: 360 QPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQ 419
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M +G P+ + Y++L+ L +L +A E+ +M++ G
Sbjct: 420 LNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLG 463
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 2/219 (0%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
GYAP + YN V+ A L R L M R G +P+ +TYNIL+ L + A
Sbjct: 113 GYAPSVPAYNAVLLA-LSDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMIT 193
+ ++ M+ G P+ + + TL+ RAG LD + M +G P++V + M+
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
AG +E A+ +FD M+ +G P+V +YN+++ G+C G E+ + EM RG P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + + +L+ AG L +A ++ M E+G ++ V+
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVT 330
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 136/305 (44%), Gaps = 41/305 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN ++ C G + ARKV + ++ L P SYN +L + V+
Sbjct: 225 TFNSMVNGLCKAGRMEGARKVFDEMVREGL---APDVVSYNTLLSGYCKVGCLHESLAVF 281
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-------------------FHRLLD----- 104
+M+ G PD++T+ ++ A + G L+Q F L+D
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341
Query: 105 -----------EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
EM + G P YN L++ K + A L+ M+ P V+ +
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+T++ G + GNLD+ +M KG +PD + Y+ +I L A +LF+ M+
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+ FTY ++I G C G ++A ++ EM +G P+ + Y+ L++ L + + E
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521
Query: 274 AHEVI 278
AH ++
Sbjct: 522 AHRLL 526
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 136/303 (44%), Gaps = 21/303 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TF LI C G + A VE K +P YNA+++
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKC---GIQPSVVCYNALINGYCK 375
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + L + ++M + PD++TY+ ++ ++G LD +L +M + G PD T
Sbjct: 376 LGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 435
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L + + A L +M ++G P +TTL+DG + GN++ DEM
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMI 495
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN------------- 224
KG +PDVV Y+V+I + ++A L + + +P+ Y+
Sbjct: 496 RKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKS 555
Query: 225 --SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++++GFCM G EA + + M R + VY+ L+ G + +A + M+
Sbjct: 556 VVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Query: 283 EKG 285
G
Sbjct: 616 RSG 618
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V A KV + + +P YNA++ + +M + G A
Sbjct: 566 CKVGRVDEAVKVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 623
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TYN+++ A + G+ + + L++EMG G +PD TYNIL++ K AL +
Sbjct: 624 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 683
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+M G +V+ +T L+ LS+ G + FDE +G PD+V Y +I S+
Sbjct: 684 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 743
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+G +++A ++ M K P+ TYN+++RG C+ G+ DEA ++ EM RG P+ +
Sbjct: 744 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 803
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL+S G + +A + M+ KG
Sbjct: 804 YNTLISGYSMKGDVKDALRIRNEMMNKG 831
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 47 SYNAILHALL----GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
+YN ++HAL G Y+L+E +M +G APD+ TYNI++ + G + + +
Sbjct: 628 TYNLLVHALFMDGRGTEAYELVE----EMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 683
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M R G TY L++ L K + L + G P ++ + L++ S
Sbjct: 684 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 743
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+GN+D EM K PD V Y ++ G +++A+ L D M +G P++ T
Sbjct: 744 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 803
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+ M G +A + EM ++G NP L YN L+ L G+ +A +++ MV
Sbjct: 804 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 863
Query: 283 EKG------KYIHLV 291
E G YI L+
Sbjct: 864 ENGITPDDSTYISLI 878
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T T+N+L+ G + E + P +YN +++
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 676
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +++ MS G ++TY ++ A + G++ + +L DE R G PD YN
Sbjct: 677 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 736
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ A ++ M++ P + + TLM GL G +D + DEM +G
Sbjct: 737 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 796
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I+ Y G+++ A + + M+ KG P + TYN++I+G C G+ D+A
Sbjct: 797 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 856
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
M+KEM G P+ Y +L+ L + A
Sbjct: 857 NMVKEMVENGITPDDSTYISLIEGLTTEDERA 888
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
T+NI++ GK + LL +M R P+ TYN ++ + AAL+++ M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 545
Query: 142 KEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAG 199
+E G P+ + T++ G + G +D FDEM KG P+ V Y +I Y G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L+ A D M+ +G V TYN ++ M G+ EA +++EM +G P+ YN
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L++ G + +A E+ +M +G +V+
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+LL +L L + MK + S L+ L A F +M
Sbjct: 426 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAF----ALFADMFR 481
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ +M+ +AG+ +A +L M PN TYN++I GFC G+
Sbjct: 482 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQA 537
Query: 239 ACTMMKEMESR-GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +M+EM R G PN Y T++S G++ EA +V M+ KG+
Sbjct: 538 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 586
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 139/277 (50%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C + A K+ + I + P +YN+IL L E ++
Sbjct: 189 TYNTLIDGFCRVEKTDEAMKLFKDVIAK---GYMPDTVTYNSILLGLARKSNMDEAEEMF 245
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M D G AP+ TY+IV+ R+G + + L +EM FSPD N ++ +L K
Sbjct: 246 KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA 305
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A +L M ++G P V+ + L+DGL + +D F M + GC PD+V Y
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+V++ ++ A+ LFD MI + +P+V T+N ++ G C AGK DEA ++ M
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + TL+ L + EA + ++MVEKG
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKG 462
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 130/247 (52%), Gaps = 2/247 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +Y+ I+ L + + ++M+++G PD+ TY I++ R GK+D+
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEAD 65
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +M G S + YN L++ L K + A LL M G++P + + T++ GL
Sbjct: 66 ELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGL 125
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD--GMITKGQLP 218
R G + K FFD M ++G PDVV Y ++ + G++ +A LF M + P
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++ TYN++I GFC K DEA + K++ ++G P+ + YN+++ L + EA E+
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245
Query: 279 RHMVEKG 285
+ MV+ G
Sbjct: 246 KKMVDSG 252
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 147/322 (45%), Gaps = 37/322 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G T++I++ VG + +E + + F P NA++ L ++
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V ++MS G PD++TYNI++ + +D+ H L M +G +PD +Y++
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSV 367
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L+ L K +K A L + M E P V+ F LMDGL +AG LD K D M+
Sbjct: 368 VLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL----------------------- 217
+PD V T ++ ++A LF M+ KG +
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487
Query: 218 --------------PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
P+V TY +++ AG+ D+A ++M GC P+++ YNTL++
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMN 547
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
LR G+ +A + + M EKG
Sbjct: 548 GLRKQGRHIQADRLTQAMKEKG 569
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 144/297 (48%), Gaps = 8/297 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G +N LI C + A K++E + P +YN IL L
Sbjct: 71 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK---GYEPDNITYNTILSGLCR 127
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD--EMGRSGFSPDF 115
+ + + + M GY+PD++ YN ++ A Y+ GK+ + L +M +PD
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ + +K A+ L + G+ P + + +++ GL+R N+D + F +
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + GC P+ Y+++++ + G + + +L++ M K P+V N++I C A K
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D+A +++EM G P+ + YN L+ L + +AHE+ MV+ G +VS
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 364
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 146/288 (50%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARK-----VVERFIKSKLFNFRPFKNSYNAILHAL 55
+I G+ T+N ++ +GLARK E F K P +Y+ +L
Sbjct: 213 VIAKGYMPDTVTYNSIL-----LGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGH 267
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ +Y++M+++ ++PD+L N V+ + K+D H++L+EM + G PD
Sbjct: 268 CRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV 327
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYNILL L K + A L + M + G P ++ ++ +++GL + + + FD
Sbjct: 328 VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDR 387
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + +PDVV + +++ AG+L++A+DL D M LP+ T +++ G C +
Sbjct: 388 MIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKR 447
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
DEA + + M +G + L +N +++ L GKLA+A + MV+
Sbjct: 448 TDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVK 495
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 137/289 (47%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E GF T++ +I C G+V A ++VE + P +Y I+ L
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEK---GVNPDVATYTIIVDRLCR 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M + G + + + YN ++ + +++ ++LL+EM G+ PD T
Sbjct: 58 AGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD--E 175
YN +L L + K A + M G+ P V+ + L+D L + G + F +
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
MA++ PD++ Y +I + + ++A LF +I KG +P+ TYNS++ G
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
DEA M K+M GC PN Y+ ++S G +A E+ M EK
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK 286
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ T+N ++ +G + + F + P +YN +L AL ++
Sbjct: 106 MASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALY--KE 163
Query: 61 YKLIE-W---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
K+ E W M+D APD++TYN ++ R+ K D+ +L ++ G+ PD
Sbjct: 164 GKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTV 223
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN +L L + A + M + G P+ ++ ++ G R GN+ C ++EM
Sbjct: 224 TYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEM 283
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
K PDV+ +I A +++ A + + M G +P+V TYN ++ G C
Sbjct: 284 TEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLV 343
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
D+A + M GC P+ + Y+ +++ L K+ +A + M+E+
Sbjct: 344 DKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 391
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M E GF+P V+ ++T++ GL + G + +EM KG PDV YT+++ AG+
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+++A +LF MI +G N YN++I G C + A +++EM S+G P+ + YNT
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++S L GK++EA + M +G
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRG 145
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 37/247 (14%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+NIL+ + L K E F P SY+ +L+ L + ++ +M
Sbjct: 329 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 388
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ PD++T+NI+M + GKLD+ LLD M PD T L+H L + +
Sbjct: 389 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRT 448
Query: 132 LAALNLLNHMKEVG-------------------------------------FDPSVLHFT 154
A+ L +M E G F P V+ +T
Sbjct: 449 DEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYT 508
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
TL++ L AG +D +F +M GC PD V Y ++ G +A L M K
Sbjct: 509 TLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568
Query: 215 GQLPNVF 221
G L + F
Sbjct: 569 GFLSDCF 575
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 136/264 (51%), Gaps = 4/264 (1%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSY---NAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
L KV++R + LF F F A+ A+ R + E++ ++M + G+ PD L
Sbjct: 238 LLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYL-RKMVNGGFEPDDL 296
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
TYN ++ + G + +R+L + GF PD TY L++ K P A+ +
Sbjct: 297 TYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDG 356
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G PS++ + TL+ GLS+ G + +EMA GC+P++ Y ++I G +
Sbjct: 357 LGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCV 416
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
A L D I KG P++FTYN++I G+C K D A M+ M S+G P+ + YNTL
Sbjct: 417 SDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTL 476
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
++ L AGK E E+ + M EKG
Sbjct: 477 LNGLCKAGKSEEVMEIFKAMEEKG 500
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 145/295 (49%), Gaps = 2/295 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIR 59
M+ GF T+N +I + G+ + R +K +F F+P + +Y ++++
Sbjct: 286 MVNGGFEPDDLTYNSIIDGYCKKGMVQDA-NRVLKDAVFKGFKPDEFTYCSLINGFCKDG 344
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
V++ +G P I+ YN ++ + G + +L++EM +G P+ TYN
Sbjct: 345 DPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYN 404
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++++ L K A +L++ G P + + TL+DG + LD+ + M ++
Sbjct: 405 LVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQ 464
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PDV+ Y ++ AG+ E+ ++F M KG PN+ TYN ++ C A K +EA
Sbjct: 465 GMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEA 524
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
++ EM+S+G P+ + + TL + G + A+++ R M ++ H + +
Sbjct: 525 VDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATY 579
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 144/300 (48%), Gaps = 24/300 (8%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--LLGIRQ 60
E+GF TA T+ ++ G G ++ + + + +N NA+L + ++
Sbjct: 33 EDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMR-------ENVNNALLEGAYIEAMKN 85
Query: 61 Y----KLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
Y K+ E V +++M P + ++N +M G +Q H++ M G D
Sbjct: 86 YGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSD 145
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY I + K +P AAL LL +M E+G D + + + T++ GL +G D + FD
Sbjct: 146 VYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFD 205
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM + PDVV + ++ G + +++ L ++ +G PN+FT+N ++G C G
Sbjct: 206 EMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREG 265
Query: 235 KFD---------EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D EA +++M + G P+ L YN+++ G + +A+ V++ V KG
Sbjct: 266 ALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKG 325
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 128/289 (44%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ENG T+N++I C G V A +V+ I P +YN ++
Sbjct: 391 MAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK---GCPPDIFTYNTLIDGYCK 447
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M +G PD++TYN ++ + GK ++ + M G +P+ T
Sbjct: 448 QLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIIT 507
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI++ L K K A++LL MK G P V+ F TL G + G++D F M
Sbjct: 508 YNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRME 567
Query: 178 NK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ Y ++++++ + A LF M G P+ +TY +I GFC G
Sbjct: 568 KQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNI 627
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + E + P+ + +++ L K+ EA +I M++KG
Sbjct: 628 TQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKG 676
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 33/236 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G +F L C G++ A ++ R K ++ +YN I+ A
Sbjct: 531 MKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM--EKQYDVCHTTATYNIIVSAFSE 588
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M + G PD TY +V+ ++G + Q ++ L E F P T
Sbjct: 589 QLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTT 648
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ +L+ L DK A+ +++ M + G P ++ T+ + + + A K +++
Sbjct: 649 FGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVN--TIFEADKKV--VAAPKILVEDLL 704
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM----ITKGQLPNVFTYNSMIRG 229
KG + YT + L+DG+ I K +LP V NS+ RG
Sbjct: 705 KKG---HIAYYTYEL--------------LYDGIRDKKILKKRLPTV---NSLHRG 740
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 133/253 (52%), Gaps = 2/253 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +Y A++HAL + ++M++ P+++TY +++ + G++D+
Sbjct: 42 FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL +M R P TYN L+ L K ++ A +LL M G P + +TTL+ G
Sbjct: 102 ALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF 160
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ-LPN 219
++ D F+++ +G PDVV Y+ +I G L++A DLF MI G +PN
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYNS+I GFC GK DEA +++ M G +P+ + Y TL++ +L +A++++
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 280 HMVEKGKYIHLVS 292
M KG +V+
Sbjct: 281 QMTRKGLTPDVVT 293
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 11/289 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+ LI C + A +V E+ + FRP +Y+ ++ L
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR---GFRPDVVTYSCLIDGLCK 197
Query: 58 IRQYKLIEWVYQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ K ++ +M G P+ +TYN ++ R+GK+D+ LL+ M +G SPD
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L++ K + A +LLN M G P V+ FT+LMDGL R L + EM
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQD-LFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
K C P V Y ++ Y A +LE+A+ + + M PNV ++N MIRG C +
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNR 374
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA +++E R CNP+ ++Y T++ L K+ EA V R M+E+
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 157/310 (50%), Gaps = 20/310 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF T++ LI C G + A + R IKS + P +YN+++
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG--SCMPNTVTYNSLISGFCR 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M++ G +PD++TY +M +L +LD + LL++M R G +PD T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEM 176
+ L+ L + ++ A+++L M+ P+V + T++DG RA L+ A K+ +EM
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
C P+VV + +MI +A +L + + P+V Y ++I G C K
Sbjct: 354 ---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 237 DEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK------GKYIH 289
DEAC + ++M E GC PN + Y+TLV+ L NAG L A R +EK G Y
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNL 466
Query: 290 LVSKFKRYKR 299
L+ F++ R
Sbjct: 467 LIDAFRKANR 476
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 129/247 (52%), Gaps = 2/247 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y +++ L +++ + +M +G+ PD+ TY V+ A +L + + L+EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+P+ TY +L+ L KG + A+ LL+ M++ P+ + + +L+ GL +A
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+EM GC+PD+ YT +IT + + + + A +F+ ++ +G P+V TY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 227 IRGFCMAGKFDEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G C G+ EA + M +S C PN + YN+L+S GK+ EA ++ M E G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 286 KYIHLVS 292
+V+
Sbjct: 252 SSPDVVT 258
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 8/227 (3%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+ D +TY ++ ++ +L+Q L +M GF PD +TY ++H L ++ A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M P+V+ +T L+DGL + G +D +M K C+P V Y +I+
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A +A DL + M+ G +P++FTY ++I GFC + K D+A + +++ +RG P+ +
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGK-------YIHLVSKFKR 296
Y+ L+ L G+L EA ++ M++ G Y L+S F R
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 1 MIENG--FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
MI++G P T T+N LI C G++ A ++ER ++ P +Y +++
Sbjct: 211 MIKSGSCMPNTV-TYNSLISGFCRMGKMDEAMNLLERMAET---GSSPDVVTYTTLMNGF 266
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + QM+ +G PD++T+ +M R +L +L EM R SP
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 116 HTYN---------------------------------ILLHVLGKGDKPLAALNLLNHMK 142
+TYN I++ L K ++ A+ L+ +
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+P V+ +TT++DGL R +D AC+ + + GC+P+ + Y+ ++T AG L
Sbjct: 387 RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGML 446
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++A+ G I KG +PN+ TYN +I F A + ++A ++ +M RG
Sbjct: 447 DRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+A C D V YT +I LE+A M++KG P+V+TY ++I C+ +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA ++EM +R PN + Y L+ L G++ EA ++ M +K
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK 110
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P +FNI+I +V + + +E +++ P Y ++ L ++
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
VY++M +E G P+ +TY+ ++ G LD+ +++ G P+ TYN+L+
Sbjct: 416 VYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAF 471
Query: 126 GKGDKPLAALNLLNHMKEVGF 146
K ++ A LL+ M + GF
Sbjct: 472 RKANRDEDARELLDDMVQRGF 492
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 145/285 (50%), Gaps = 14/285 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T T+N +I C E+G ++ E +K P +YN ++ +L
Sbjct: 72 MARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKR---GHHPDVVTYNTLIDSLCK 128
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS--PDF 115
+ ++ MS G P+++TY++++ ++G++D+ L+ EM R P+
Sbjct: 129 AGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNI 188
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKE--VGFDPSVLHFTTLMDGLSRAGNLD-ACKYF 172
TYN L L K A L+ +++ + P + F+TL+DGL + G D AC
Sbjct: 189 ITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN-- 246
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
D+M G +P+VV Y ++ A ++E+A + + M+ KG P+V TY+ ++ FC
Sbjct: 247 -DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 305
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
A + DEA ++ M SRGC PN + +N+++ L + + EA ++
Sbjct: 306 ASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQI 350
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 141/289 (48%), Gaps = 21/289 (7%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ LI C CG+ A + I + P +YNA+++ L + + +
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAG---GYVPNVVTYNALVNGLCKADKMERAHAMI 281
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M D+G PD++TY++++ A + ++D+ LL M G +P+ T+N ++ L K
Sbjct: 282 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 341
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D+ A + + P + F L+ G +AGN + F+EM K PDV+ +
Sbjct: 342 DRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I AG++E A+D+ D M G PNV TYN ++ G C +G+ +E C ++EM S
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVS 461
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
GC P + Y +LV L A + +A + LVSK K +
Sbjct: 462 SGCVPESMTYGSLVYALCRASRTDDA-------------LQLVSKLKSF 497
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 132/279 (47%), Gaps = 20/279 (7%)
Query: 37 KLFNFRPFKNS---YNAILHALLGIRQY-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
K F R S YN +L +L + + +E +M+ +G AP I+TYN ++ +
Sbjct: 34 KFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCK 93
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+L L +E+ + G PD TYN L+ L K A L M G P+V+
Sbjct: 94 SNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVT 153
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGC--MPDVVCYTVMITSY----IAAGELEKAQD 206
++ L++GL + G +D + EM K C +P+++ Y + + A E +
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRS 213
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
L DG + P+ T++++I G C G+ DEAC +M + G PN + YN LV+ L
Sbjct: 214 LRDGSLRVS--PDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLC 269
Query: 267 NAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A K+ AH +I MV+KG Y LV F + R
Sbjct: 270 KADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASR 308
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+++L+ + + +E P ++N+I+ L +
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDR 343
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ Q+ + PD +T+NI++ + G +Q L +EM PD T+
Sbjct: 344 SGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGA 403
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + AA ++L+ M +G P+V+ + L+ GL ++G ++ F +EM + G
Sbjct: 404 LIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSG 463
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P+ + Y ++ + A + A L + + G P+ TYN ++ G +GK ++A
Sbjct: 464 CVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAI 523
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
T+++EM +G P+ + L +G LA E++R ++ KG
Sbjct: 524 TVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKG 568
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 6/219 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI C G A + E + N +P ++ A++ L Q + +
Sbjct: 365 TFNILIAGACKAGNFEQASALFEEMVAK---NMQPDVMTFGALIDGLCKAGQVEAARDIL 421
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M + G P+++TYN+++ + G++++ L+EM SG P+ TY L++ L +
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL L++ +K G+DP + + L+DGL ++G + +EM KG PD +
Sbjct: 482 SRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTF 541
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+G L +L ++ KG LP+ T +S++
Sbjct: 542 AACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T+N+L+ C G + + +E + S P +Y ++++AL +
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV---PESMTYGSLVYALCRASRT 484
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ G+ PD +TYNI++ ++ GK +Q +L+EM G PD T+
Sbjct: 485 DDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 544
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L + + LL + G P ++++D
Sbjct: 545 FGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 162/368 (44%), Gaps = 75/368 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + R FN L+ C G+ A K++++ ++ +P YN ++ +
Sbjct: 103 MITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQC---GCQPGYVVYNILIGGICS 159
Query: 58 IRQ-----YKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS 109
+ L E Y +M + G +I ++ +C +GK ++ + ++ EM
Sbjct: 160 SEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCG---IGKFEKAYNVIREMMSK 216
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
GF PD TY+ ++ L K A L MK G P V +TTL+D +AG ++
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQA 276
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ +FDEM GC P+VV YT +I +Y+ + ++ KA ++++ M++KG PN+ TY ++I G
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDG 336
Query: 230 FCMAGKFD---------------------------------------------------- 237
C AGK +
Sbjct: 337 LCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVK 396
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
EA ++K M GC PN +VY+ L+ AGKL EA EV M+E G Y L+
Sbjct: 397 EARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLI 456
Query: 292 SKFKRYKR 299
+ + KR
Sbjct: 457 DRLFKDKR 464
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 135/302 (44%), Gaps = 17/302 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG + LI + + G + F + + P +Y A++HA L R+
Sbjct: 248 MKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRK 307
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDE------------ 105
VY+ M +G P+I+TY + +C ++ K Q ++++ +
Sbjct: 308 VSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHF 367
Query: 106 --MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+ + P+ TY L+ L K + A +LL M G +P+ + + L+DG +A
Sbjct: 368 RVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKA 427
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G LD + F M G P+V Y+ +I L+ A + M+ PNV Y
Sbjct: 428 GKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIY 487
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
MI G C GK DEA +M ME +GCNPN + Y ++ +G++ + E+++ M
Sbjct: 488 TEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSS 547
Query: 284 KG 285
KG
Sbjct: 548 KG 549
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 104/201 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y A++ L Q K + + MS EG P+ + Y+ ++ + GKLD+ + M
Sbjct: 381 TYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTM 440
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ P+ +TY+ L+ L K + AL +L+ M E P+V+ +T ++DGL + G
Sbjct: 441 LECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 500
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D M KGC P+VV YT MI + +G +EK +L M +KG PN TY +
Sbjct: 501 DEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVL 560
Query: 227 IRGFCMAGKFDEACTMMKEME 247
I C G DEA +++EM+
Sbjct: 561 INHCCSTGLLDEAHKLLEEMK 581
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 9/200 (4%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M G+ D T H L K K AL+LL + F P + +T ++ GL A
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEE---FVPDTVLYTKMISGLCEASL 57
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ F M C+P+V+ Y +++ + +L + + + MIT+G P+ +NS
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL---RNAGK--LAEAHEVIRH 280
++ +C +G + A ++K+M GC P ++VYN L+ + GK L A +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177
Query: 281 MVEKGKYIHLVSKFKRYKRC 300
M+E G ++ V+ + RC
Sbjct: 178 MLEAGVVLNKVN-ISNFSRC 196
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 122/302 (40%), Gaps = 35/302 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++ LI C + G + E F + P +Y++++ L ++ L V +M
Sbjct: 416 VYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKM 475
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ AP+++ Y ++ ++GK D+ ++L+ M G +P+ TY ++ GK +
Sbjct: 476 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRV 535
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM--------------- 176
L LL M G P+ + + L++ G LD +EM
Sbjct: 536 EKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKV 595
Query: 177 ------------------ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM--ITKGQ 216
+ +P Y V+I ++I AG LE A +L + + +
Sbjct: 596 IEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFS 655
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
N + ++I +A K D+A + +M SRG P + L+ L + EA +
Sbjct: 656 AANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQ 715
Query: 277 VI 278
++
Sbjct: 716 LL 717
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 98/255 (38%), Gaps = 43/255 (16%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
MS GY D T C + L K ++ L + + F PD Y ++ L +
Sbjct: 1 MSTMGYRMDEFTLG---CFAHSLCKSGKWREALSLLEKEEFVPDTVLYTKMISGLCEASL 57
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A++ L M+ P+VL + L+ G L CK M +GC P +
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA----------------- 233
++ +Y +G+ A L M+ G P YN +I G C +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177
Query: 234 -----------------------GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
GKF++A +++EM S+G P+ Y+ ++ L NA K
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASK 237
Query: 271 LAEAHEVIRHMVEKG 285
+ +A ++ + M G
Sbjct: 238 VEKAFQLFQEMKRNG 252
>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
Length = 766
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 9/295 (3%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH--ALLGIRQYKLIEWV 67
A + L+ G R V F + +P +YN +LH + + + +++E V
Sbjct: 154 AGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELV 213
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
M + G APD TYN ++ R + ++ DEM SGF PD T+N LL V GK
Sbjct: 214 -ASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 272
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A+ ++ M+ VG PSV+ + +L+ + G L+ EM KG PDVV
Sbjct: 273 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 332
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT +I+ AG+++ A +D M+ G PN+ TYN++I+ + GKF E + E
Sbjct: 333 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 392
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKR 296
S G P+ + +NTL++ G +E V + M E+ Y+ L+S + R
Sbjct: 393 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 447
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHR 101
P +Y A++ A +++ V+++M D G P I+TYN+V+ ++ +
Sbjct: 152 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 211
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ M G +PD +TYN L+ + A + + MK GF+P + F +L+D
Sbjct: 212 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 271
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A D EM GC P VV Y +I+SY+ G LE+A L M KG P+V
Sbjct: 272 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 331
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
TY ++I G AGK D A EM GC PN YN L+ GK E
Sbjct: 332 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 383
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 1/288 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+++G T+N+++ ++ + ++VVE K P + +YN ++
Sbjct: 180 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 239
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YK V+ +M G+ PD +T+N ++ + + D+ ++ EM R G P TYN
Sbjct: 240 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 299
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K A+ L M+ G P V+ +TTL+ GL RAG +DA +DEM
Sbjct: 300 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 359
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ Y +I + G+ + +FD + G +P++ T+N+++ F G E
Sbjct: 360 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 419
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ KEM+ G P Y +L+S+ G A ++ + M+E G Y
Sbjct: 420 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 467
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 35/306 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G T+N LI C L ++ + F + K F P K ++N++L R+
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275
Query: 61 Y-KLIEWVY----------------------------------QQMSDEGYAPDILTYNI 85
+ + IE + Q+M +G PD++TY
Sbjct: 276 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTT 335
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ R GK+D DEM R+G P+ TYN L+ + G K + + + + G
Sbjct: 336 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 395
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P ++ + TL+ + G F EM G +P+ Y +I+SY G + A
Sbjct: 396 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 455
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ M+ G P+V TYN+++ G++++A + EME R C P+ Y++L+
Sbjct: 456 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAY 515
Query: 266 RNAGKL 271
NA +L
Sbjct: 516 ANAKRL 521
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 41/312 (13%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G+ T+ LI + CG LA ++ +R +++ ++ P ++YNA+L AL
Sbjct: 426 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY---PDVSTYNAVLSALAR 482
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP---- 113
+++ E ++ +M + PD +Y+ ++ A +LD+ L D++ P
Sbjct: 483 GGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWL 542
Query: 114 -------------------------------DFHTYNILLHVLGKGDKPLAALNLLNHMK 142
D + N ++ + GK +L+ MK
Sbjct: 543 VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK 602
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E + S + +LM SR G+ + C+ E+ + G PD Y +I +Y G+++
Sbjct: 603 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMK 662
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A LF M G P+V TYN ++ + F+EA +++ M ++GC PN YN++V
Sbjct: 663 EASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIV 722
Query: 263 SNLRNAGKLAEA 274
GKL +A
Sbjct: 723 EGYCRNGKLTDA 734
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 4/282 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQYK 62
G P + T+N LI + + GL + V + ++ +P +Y ++ L G
Sbjct: 290 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 349
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++E Y +M G P++ TYN ++ GK + + DE +GF PD T+N LL
Sbjct: 350 IVE--YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 407
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
V G+ + MK+ G+ P + +L+ SR G D + M G
Sbjct: 408 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 467
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDV Y ++++ G E+A+ LF M + P+ ++Y+S++ + A + D+ +
Sbjct: 468 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 527
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ S P+ + TLV LAEA + + +K
Sbjct: 528 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 569
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 35/316 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ GL +V F + K + P +++Y +++ + + L
Sbjct: 395 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 454
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y++M + G PD+ TYN V+ A R G+ +Q +L EM PD ++Y+ LLH
Sbjct: 455 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 514
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ L + + +P TL+ S+ NL + F E+ K C D
Sbjct: 515 YANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLD 574
Query: 185 VVCYTVMITSY----------------------IAA-------------GELEKAQDLFD 209
+ M++ Y ++A G+ EK +++
Sbjct: 575 INVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILT 634
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ + G P+ ++YN++I + G+ EA + EM+ G P+ + YN V + +
Sbjct: 635 EIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNS 694
Query: 270 KLAEAHEVIRHMVEKG 285
EA E++R+MV +G
Sbjct: 695 MFEEAIELVRYMVTQG 710
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 122/316 (38%), Gaps = 35/316 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG T+N LI G G +++ F + + F P ++N +L
Sbjct: 356 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGL 415
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+++M GY P+ TY ++ + R G D ++ M +G PD TYN
Sbjct: 416 DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 475
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD------ 174
+L L +G + A L M+E P +++L+ + A LD K D
Sbjct: 476 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 535
Query: 175 -----------------------------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
E+ K C D+ M++ Y + K +
Sbjct: 536 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE 595
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ M + TYNS++ + G ++ ++ E++S G P+ YNT++
Sbjct: 596 KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY 655
Query: 266 RNAGKLAEAHEVIRHM 281
G++ EA + M
Sbjct: 656 GRKGQMKEASRLFSEM 671
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 82/185 (44%), Gaps = 14/185 (7%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LLD+ GR+ D +L + G +AA L H + V P VL T + ++
Sbjct: 84 LLDDPGRATSPRD-----LLSGLPGAELAAVAAREL--HGEGVLHHPRVL--ATAIRVMA 134
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
RAG L D A G PD YT +++++ AG A +F M+ G P +
Sbjct: 135 RAGRLAEASALLD--AAPG--PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIV 190
Query: 222 TYNSMIRGFC-MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN ++ + MA + E ++ M+ G P+ YNTL+S R EA +V
Sbjct: 191 TYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDE 250
Query: 281 MVEKG 285
M G
Sbjct: 251 MKASG 255
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 4/159 (2%)
Query: 51 ILHALLGI----RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+L+A++ I R + +E + M + TYN +M RLG ++ +L E+
Sbjct: 577 VLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEI 636
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
SG PD ++YN +++ G+ + A L + MK G P V+ + +
Sbjct: 637 KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMF 696
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ M +GC P+ Y ++ Y G+L A+
Sbjct: 697 EEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 735
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 151/323 (46%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G +RTF +LI C +G A ++++ K N P SY A+++ L
Sbjct: 394 MVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR---NLVPSAVSYGAMINGLCH 450
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L + ++M+ G P+++ Y+I++ A G++++ RLLD M SG +PD
Sbjct: 451 CKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFC 510
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K K A L ++ G P + F + G S+ G + +FDEM
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 178 NKGCMPDVVCYTVMITSYIAAGEL-----------------------------------E 202
+ G MP+ YTV+I + AG L +
Sbjct: 571 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQ 630
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A +F + KG +P+VFTY+S+I GFC G+ ++A + EM +G PN +YN LV
Sbjct: 631 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 690
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L +G + A ++ M EKG
Sbjct: 691 DGLCKSGDIQRARKLFDGMPEKG 713
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 113/218 (51%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M D G P+ Y +++ ++ G L + + + G PD T + +H L K
Sbjct: 566 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLK 625
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ AL + + +KE G P V +++L+ G + G ++ DEM KG P++
Sbjct: 626 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 685
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ +G++++A+ LFDGM KG P+ TY++MI G+C + EA ++ EM
Sbjct: 686 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S+G P+ VYN LV G + +A + R M++KG
Sbjct: 746 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 783
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 144/292 (49%), Gaps = 1/292 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G + +LI + G + + F + P + +A +H LL +
Sbjct: 569 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGR 628
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ ++ ++G PD+ TY+ ++ + G++++ L DEM G +P+ YN
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A L + M E G +P + ++T++DG ++ N+ F EM +KG
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P Y ++ G++EKA +LF M+ KG ++N++I G+C + K EA
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEAS 807
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM ++ P+ + Y T++ AGK+ EA+ + + M E+ + V+
Sbjct: 808 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 859
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 139/320 (43%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G ++++I +VG + VE P +Y I L ++
Sbjct: 254 MDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKR 313
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +++M G PD + ++ R G +D+ R+ D M G + TYN+
Sbjct: 314 MNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNV 373
Query: 121 LLHVLGK-----------------GDKPLA------------------ALNLLNHMKEVG 145
L+H L K G KP + AL LL+ M++
Sbjct: 374 LIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 433
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
PS + + +++GL +L ++M G P+VV Y+++I +Y + G +E+A+
Sbjct: 434 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEAR 493
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L DGM G P++F YN++I AGK +EA T + E++ RG P+ + + +
Sbjct: 494 RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGY 553
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
GK+ EA + M++ G
Sbjct: 554 SKTGKMTEAAKYFDEMLDHG 573
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 1/283 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G T++ LI + G K E + L P YNA++ L +
Sbjct: 641 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 700
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++ M ++G PD +TY+ ++ + + + L EM G P YN L+
Sbjct: 701 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H K A+NL M + GF + L F TL+DG ++ + F EM K M
Sbjct: 761 HGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD V YT +I + AG++E+A LF M + + + TY S++ G+ G+ E +
Sbjct: 820 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++M ++G P+ + Y ++ L EA ++ +V KG
Sbjct: 880 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 922
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 20 CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
CG + L KV + +K+ F + +Y ++ AL + + V +M ++G P+
Sbjct: 206 CGMMELFWKVYNGMLDAKM-GFDVY--TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPN 262
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
Y++V+ ++G +D+ L MG G P+ +TY I+ L + + A
Sbjct: 263 EFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFE 322
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M++ G P + L+DG R G++D D M + G +++ Y V+I G
Sbjct: 323 EMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFG 382
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
++EKA ++ GM+T G PN T+ +I G+C A ++ EME R P+ + Y
Sbjct: 383 KMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYG 442
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ L + L+ A++++ M G
Sbjct: 443 AMINGLCHCKDLSLANKLLEKMTFSG 468
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 131/300 (43%), Gaps = 21/300 (7%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIK----------SKLFNFRPFKNSYNAI 51
G P +F+IL +C GLA V+ + I+ S LF FR + S +
Sbjct: 101 GVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYGGSSPVV 160
Query: 52 LHALLGIRQYKLIEW------VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
L I YK + V+ ++ ++ N ++ + G ++ F ++ +
Sbjct: 161 FDIL--IDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M + D +TY L+ L K A +L M E G +P+ ++ +++G+ + G+
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+D M KG +P+ YT++ A + +A+ F+ M G P+ ++
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I GF G DE + M S G N + YN L+ L GK+ +A E+++ MV G
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 122/280 (43%), Gaps = 7/280 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G + T++ +I C V A + + SK +P YNA++H
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE-MPSK--GVQPHSFVYNALVHGCCK 765
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G+A L++N ++ + K+ + +L EM PD T
Sbjct: 766 EGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVT 824
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ K K A L M+E + +T+LM G ++ G F++M
Sbjct: 825 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 884
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD V Y ++I ++ L +A L D ++ KG L ++ +I C
Sbjct: 885 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 944
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
EA ++ EM G P+ NTLV + AGK+ EA V
Sbjct: 945 EASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 118/282 (41%), Gaps = 1/282 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G + +N L+ C + G K + F + L S+N ++ +
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF-REMLQKGFATTLSFNTLIDGYCKSCK 802
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++Q+M + PD +TY V+ + GK+++ + L EM D TY
Sbjct: 803 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 862
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K + L M G P + + ++ + NL DE+ KG
Sbjct: 863 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 922
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + ++IT+ +L +A L D M G P++ N+++R F AGK DEA
Sbjct: 923 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEAT 982
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ + ++S G P+ LV+ N +A +I+ +V
Sbjct: 983 RVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 133/253 (52%), Gaps = 2/253 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +Y A++HAL + ++M++ P+++TY +++ + G++D+
Sbjct: 42 FHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAV 101
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL +M R P TYN L+ L K ++ A +LL M G P + +TTL+ G
Sbjct: 102 ALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGF 160
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ-LPN 219
++ D F+++ +G PDVV Y+ +I G L++A DLF MI G +PN
Sbjct: 161 CKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPN 220
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYNS+I GFC GK DEA +++ M G +P+ + Y TL++ +L +A++++
Sbjct: 221 TVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLN 280
Query: 280 HMVEKGKYIHLVS 292
M KG +V+
Sbjct: 281 QMTRKGLTPDVVT 293
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 144/289 (49%), Gaps = 11/289 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+ LI C + A +V E+ + FRP +Y+ ++ L
Sbjct: 141 MVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR---GFRPDVVTYSCLIDGLCK 197
Query: 58 IRQYKLIEWVYQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ K ++ +M G P+ +TYN ++ R+GK+D+ LL+ M +G SPD
Sbjct: 198 EGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVV 257
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L++ K + A +LLN M G P V+ FT+LMDGL R L + EM
Sbjct: 258 TYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEM 317
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQD-LFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
K C P V Y ++ Y A +LE+A+ + + M PNV ++N MIRG C +
Sbjct: 318 RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNR 374
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA +++E R CNP+ ++Y T++ L K+ EA V R M+E+
Sbjct: 375 SSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 20/310 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF T++ LI C G + A + R IKS + P +YN+++
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG--SCMPNTVTYNSLISGFCR 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M++ G +PD++TY +M +L +LD + LL++M R G +PD T
Sbjct: 234 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEM 176
+ L+ L + ++ A+++L M+ P+V + T++DG RA L+ A K+ +EM
Sbjct: 294 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM 353
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
C P+VV + +MI +A +L + + P+V Y ++I G C K
Sbjct: 354 ---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKV 410
Query: 237 DEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK------GKYIH 289
DEAC + ++M E GC PN + Y+TL++ L NAG L A R +EK G Y
Sbjct: 411 DEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNL 466
Query: 290 LVSKFKRYKR 299
L+ F++ R
Sbjct: 467 LIDAFRKANR 476
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 129/247 (52%), Gaps = 2/247 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y +++ L +++ + +M +G+ PD+ TY V+ A +L + + L+EM
Sbjct: 13 TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+P+ TY +L+ L KG + A+ LL+ M++ P+ + + +L+ GL +A
Sbjct: 73 ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+EM GC+PD+ YT +IT + + + + A +F+ ++ +G P+V TY+ +
Sbjct: 132 SEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCL 191
Query: 227 IRGFCMAGKFDEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G C G+ EA + M +S C PN + YN+L+S GK+ EA ++ M E G
Sbjct: 192 IDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETG 251
Query: 286 KYIHLVS 292
+V+
Sbjct: 252 SSPDVVT 258
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 117/227 (51%), Gaps = 8/227 (3%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+ D +TY ++ ++ +L+Q L +M GF PD +TY ++H L ++ A
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M P+V+ +T L+DGL + G +D +M K C+P V Y +I+
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A +A DL + M+ G +P++FTY ++I GFC + K D+A + +++ +RG P+ +
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGK-------YIHLVSKFKR 296
Y+ L+ L G+L EA ++ M++ G Y L+S F R
Sbjct: 187 TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCR 233
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 134/289 (46%), Gaps = 47/289 (16%)
Query: 1 MIENG--FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
MI++G P T T+N LI C G++ A ++ER ++ P +Y +++
Sbjct: 211 MIKSGSCMPNTV-TYNSLISGFCRMGKMDEAMNLLERMAET---GSSPDVVTYTTLMNGF 266
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + QM+ +G PD++T+ +M R +L +L EM R SP
Sbjct: 267 CKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTV 326
Query: 116 HTYN---------------------------------ILLHVLGKGDKPLAALNLLNHMK 142
+TYN I++ L K ++ A+ L+ +
Sbjct: 327 YTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEAR 386
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+P V+ +TT++DGL R +D AC+ + + GC+P+ + Y+ +IT AG L
Sbjct: 387 RRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGML 446
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++A+ G I KG +PN+ TYN +I F A + ++A ++ +M RG
Sbjct: 447 DRAR----GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+A C D V YT +I LE+A M++KG P+V+TY ++I C+ +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA ++EM +R PN + Y L+ L G++ EA ++ M +K
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK 110
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 5/141 (3%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P +FNI+I +V + + +E +++ P Y ++ L ++
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
VY++M +E G P+ +TY+ ++ G LD+ +++ G P+ TYN+L+
Sbjct: 416 VYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAF 471
Query: 126 GKGDKPLAALNLLNHMKEVGF 146
K ++ A LL+ M + GF
Sbjct: 472 RKANRDEDARELLDDMVQRGF 492
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 140/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G T TF LI +VG + VE F +P +YN I++ L I +
Sbjct: 154 VIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGE 213
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M + G P+++TY+ ++ + R +++ + M G SPD TY
Sbjct: 214 TAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS 273
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A LLN M + P ++ F L+D + G + M G
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y+ ++ Y ++ +A+ LF MITKG PN+F+YN +I G+C A + DEA
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G PN + YNTL+ GKL EA ++ R+M G
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNG 438
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+N +I C GE A ++++ ++ +P +Y+ ++ +L
Sbjct: 189 MVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA---GCQPNMVTYSTLIDSLCR 245
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ M +G +PDI TY ++ + + + LL+EM PD T
Sbjct: 246 DRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVT 305
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N+L+ K K AL +L M E+G +P+V+ +++LM G S ++ + F M
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMI 365
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P++ Y ++I Y A +++A LF+ MI +G PN +YN++I GFC GK
Sbjct: 366 TKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLR 425
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EA + + M + G P+ Y+ L+ G L +A + R M
Sbjct: 426 EAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAM 469
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 129/251 (51%), Gaps = 1/251 (0%)
Query: 43 PFKNSYNAILHALLGIRQY-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P + +L A++ + QY ++ + +QM G +P+I T +I M +L ++D
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFS 149
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+L ++ + G P T+ L++ L K + A+ L + M G P V + T+++GL
Sbjct: 150 VLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLC 209
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G A +M GC P++V Y+ +I S + +A D+F M KG P++F
Sbjct: 210 KIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIF 269
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY S+I+G C ++ EA ++ EM S P+ + +N LV GK++EA V++ M
Sbjct: 270 TYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTM 329
Query: 282 VEKGKYIHLVS 292
E G ++V+
Sbjct: 330 TEMGVEPNVVT 340
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN+L+ C G+V A V++ + P +Y+++++ ++
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTE---MGVEPNVVTYSSLMYGYSLWTDVVEARKLF 361
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M +G P+I +YNI++ + ++D+ +L +EM G +P+ +YN L+H +
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A +L +M G P + ++ L+DG + G L F M + P++V Y
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 481
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ + +G + A+ LF + +G P+V Y ++I G C G DEA + ME+
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEA 541
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + YN ++ L + A ++ M ++G
Sbjct: 542 DGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRG 578
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 6/223 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++NILI C + A ++ I L P SYN ++H
Sbjct: 364 MITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGL---TPNNVSYNTLIHGFCQ 420
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +++ M G PD+ TY+I++ + G L + RL M + P+
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 480
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+H + K A L + + G P V +TT+++GL + G LD F M
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
GC PD + Y V+I + + +A L M +G + +V
Sbjct: 541 ADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 4/165 (2%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVC 187
D LA+ N + H K + P ++ F L+ + + G D +M G P++
Sbjct: 74 DDALASFNHMLHRKPL---PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
++ + + ++ + +I G P + T+ ++I G C G+F +A + +M
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++GC P+ YNT+++ L G+ A A +++ M E G ++V+
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVT 235
>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
Length = 784
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 144/295 (48%), Gaps = 9/295 (3%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH--ALLGIRQYKLIEWV 67
A + L+ G R V F + +P +YN +LH + + + +++E V
Sbjct: 172 AGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELV 231
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
M + G APD TYN ++ R + ++ DEM SGF PD T+N LL V GK
Sbjct: 232 -ASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGK 290
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A+ ++ M+ VG PSV+ + +L+ + G L+ EM KG PDVV
Sbjct: 291 ARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVT 350
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT +I+ AG+++ A +D M+ G PN+ TYN++I+ + GKF E + E
Sbjct: 351 YTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFR 410
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKR 296
S G P+ + +NTL++ G +E V + M E+ Y+ L+S + R
Sbjct: 411 SAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSR 465
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 1/232 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHR 101
P +Y A++ A +++ V+++M D G P I+TYN+V+ ++ +
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ M G +PD +TYN L+ + A + + MK GF+P + F +L+D
Sbjct: 230 LVASMKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYG 289
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A D EM GC P VV Y +I+SY+ G LE+A L M KG P+V
Sbjct: 290 KARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVV 349
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
TY ++I G AGK D A EM GC PN YN L+ GK E
Sbjct: 350 TYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPE 401
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 1/288 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+++G T+N+++ ++ + ++VVE K P + +YN ++
Sbjct: 198 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 257
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YK V+ +M G+ PD +T+N ++ + + D+ ++ EM R G P TYN
Sbjct: 258 LYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYN 317
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K A+ L M+ G P V+ +TTL+ GL RAG +DA +DEM
Sbjct: 318 SLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRN 377
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ Y +I + G+ + +FD + G +P++ T+N+++ F G E
Sbjct: 378 GCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEV 437
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ KEM+ G P Y +L+S+ G A ++ + M+E G Y
Sbjct: 438 SGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 135/306 (44%), Gaps = 35/306 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G T+N LI C L ++ + F + K F P K ++N++L R+
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293
Query: 61 Y-KLIEWVY----------------------------------QQMSDEGYAPDILTYNI 85
+ + IE + Q+M +G PD++TY
Sbjct: 294 HDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTT 353
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ R GK+D DEM R+G P+ TYN L+ + G K + + + + G
Sbjct: 354 LISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAG 413
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P ++ + TL+ + G F EM G +P+ Y +I+SY G + A
Sbjct: 414 FVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAM 473
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ M+ G P+V TYN+++ G++++A + EME R C P+ Y++L+
Sbjct: 474 QIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAY 533
Query: 266 RNAGKL 271
NA +L
Sbjct: 534 ANAKRL 539
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 139/312 (44%), Gaps = 41/312 (13%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G+ T+ LI + CG LA ++ +R +++ ++ P ++YNA+L AL
Sbjct: 444 MKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY---PDVSTYNAVLSALAR 500
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP---- 113
+++ E ++ +M + PD +Y+ ++ A +LD+ L D++ P
Sbjct: 501 GGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWL 560
Query: 114 -------------------------------DFHTYNILLHVLGKGDKPLAALNLLNHMK 142
D + N ++ + GK +L+ MK
Sbjct: 561 VKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMK 620
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E + S + +LM SR G+ + C+ E+ + G PD Y +I +Y G+++
Sbjct: 621 ESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMK 680
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A LF M G P+V TYN ++ + F+EA +++ M ++GC PN YN++V
Sbjct: 681 EASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIV 740
Query: 263 SNLRNAGKLAEA 274
GKL +A
Sbjct: 741 EGYCRNGKLTDA 752
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 126/282 (44%), Gaps = 4/282 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQYK 62
G P + T+N LI + + GL + V + ++ +P +Y ++ L G
Sbjct: 308 GCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAA 367
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++E Y +M G P++ TYN ++ GK + + DE +GF PD T+N LL
Sbjct: 368 IVE--YDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 425
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
V G+ + MK+ G+ P + +L+ SR G D + M G
Sbjct: 426 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDV Y ++++ G E+A+ LF M + P+ ++Y+S++ + A + D+ +
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ S P+ + TLV LAEA + + +K
Sbjct: 546 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQK 587
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 138/316 (43%), Gaps = 35/316 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ GL +V F + K + P +++Y +++ + + L
Sbjct: 413 GFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLA 472
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y++M + G PD+ TYN V+ A R G+ +Q +L EM PD ++Y+ LLH
Sbjct: 473 MQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHA 532
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ L + + +P TL+ S+ NL + F E+ K C D
Sbjct: 533 YANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLD 592
Query: 185 VVCYTVMITSY----------------------IAA-------------GELEKAQDLFD 209
+ M++ Y ++A G+ EK +++
Sbjct: 593 INVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILT 652
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ + G P+ ++YN++I + G+ EA + EM+ G P+ + YN V + +
Sbjct: 653 EIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNS 712
Query: 270 KLAEAHEVIRHMVEKG 285
EA E++R+MV +G
Sbjct: 713 MFEEAIELVRYMVTQG 728
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 122/316 (38%), Gaps = 35/316 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG T+N LI G G +++ F + + F P ++N +L
Sbjct: 374 MVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGL 433
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+++M GY P+ TY ++ + R G D ++ M +G PD TYN
Sbjct: 434 DSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNA 493
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD------ 174
+L L +G + A L M+E P +++L+ + A LD K D
Sbjct: 494 VLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSER 553
Query: 175 -----------------------------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
E+ K C D+ M++ Y + K +
Sbjct: 554 IEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVE 613
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ M + TYNS++ + G ++ ++ E++S G P+ YNT++
Sbjct: 614 KILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAY 673
Query: 266 RNAGKLAEAHEVIRHM 281
G++ EA + M
Sbjct: 674 GRKGQMKEASRLFSEM 689
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 102 LLDEMGRSGFSPDFHT------YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH--- 152
LLD+ GR+ D + ++ LG +P AAL L+ +E+ + VLH
Sbjct: 84 LLDDPGRATSPRDLLSGLPAPELAAVVGALGSRGQPGAALAALHAARELHGE-GVLHHPR 142
Query: 153 -FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
T + ++RAG L D A G PD YT +++++ AG A +F M
Sbjct: 143 VLATAIRVMARAGRLAEASALLD--AAPG--PDAGAYTALVSAFSRAGRFRDAVAVFRRM 198
Query: 212 ITKGQLPNVFTYNSMIRGFC-MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ G P + TYN ++ + MA + E ++ M+ G P+ YNTL+S R
Sbjct: 199 VDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRAL 258
Query: 271 LAEAHEVIRHMVEKG 285
EA +V M G
Sbjct: 259 YKEAAQVFDEMKASG 273
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 4/159 (2%)
Query: 51 ILHALLGI----RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+L+A++ I R + +E + M + TYN +M RLG ++ +L E+
Sbjct: 595 VLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEI 654
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
SG PD ++YN +++ G+ + A L + MK G P V+ + +
Sbjct: 655 KSSGVRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMF 714
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ M +GC P+ Y ++ Y G+L A+
Sbjct: 715 EEAIELVRYMVTQGCKPNERTYNSIVEGYCRNGKLTDAK 753
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 120/232 (51%), Gaps = 6/232 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N++L AL+ R + + + + + PD +TYN + R+ + +L +M
Sbjct: 179 FNSLLDALVKSRHAGKAASLVRAL-ERRFPPDAVTYNTLADGWCRVKDTSRALDILRQMV 237
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-----PSVLHFTTLMDGLSR 162
SG +P TYNI+L + + A + MK+ G + P V+ +TT++ GL
Sbjct: 238 ESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGLGV 297
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG LD + FDEM+ +GC P + Y +I G +E A +FD MI KG +PNV T
Sbjct: 298 AGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNVVT 357
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
Y +IRG C AGK D A ++ +M+ GC PN YN L+ L G + +A
Sbjct: 358 YTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKA 409
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 124/256 (48%), Gaps = 9/256 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF-----NFRPFKNSYNAILHAL 55
M+E+G T T+NI++ G + + F++ K N +P SY +LH L
Sbjct: 236 MVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVVSYTTVLHGL 295
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Q V+ +MS EG P I TYN ++ + G ++ + D+M R G+ P+
Sbjct: 296 GVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGNVEDAVAVFDDMIRKGYIPNV 355
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY +L+ L K A+ LL+ MK G +P+V + L+ L G+++ + F+
Sbjct: 356 VTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNVLIGYLFEEGDIEKALHLFET 415
Query: 176 MAN-KGCMPDVVCYTVMITSYIA---AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
M+ + C+P+ Y ++I++ A ++ A + M+ +G LP F +N ++ G
Sbjct: 416 MSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVEMVDRGYLPRRFMFNRVLNGLM 475
Query: 232 MAGKFDEACTMMKEME 247
+ G + + +++ E
Sbjct: 476 LTGNQELSRELLRMQE 491
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 7/202 (3%)
Query: 97 DQFHRLLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
D R + RS G + D +N LL L K A +L+ + E F P + + T
Sbjct: 157 DHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRAL-ERRFPPDAVTYNT 215
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L DG R + +M G P Y +++ + +G+L+ A D F M +G
Sbjct: 216 LADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRG 275
Query: 216 Q-----LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
P+V +Y +++ G +AG+ D+A + EM GC P+ YN L+ G
Sbjct: 276 SNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGN 335
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
+ +A V M+ KG ++V+
Sbjct: 336 VEDAVAVFDDMIRKGYIPNVVT 357
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V A KV + + +P YNA++ + +M + G A
Sbjct: 561 CKVGRVDEAVKVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 618
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TYN+++ A + G+ + + L++EMG G +PD TYNIL++ K AL +
Sbjct: 619 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 678
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+M G +V+ +T L+ LS+ G + FDE +G PD+V Y +I S+
Sbjct: 679 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 738
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+G +++A ++ M K P+ TYN+++RG C+ G+ DEA ++ EM RG P+ +
Sbjct: 739 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 798
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL+S G + +A + M+ KG
Sbjct: 799 YNTLISGYSMKGDVKDALRIRNEMMNKG 826
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 14/255 (5%)
Query: 47 SYNAILHALL----GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
+YN ++HAL G Y+L+E +M +G APD+ TYNI++ + G + + +
Sbjct: 623 TYNLLVHALFMDGRGTEAYELVE----EMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 678
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M R G TY L++ L K + L + G P ++ + L++ S
Sbjct: 679 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 738
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+GN+D EM K PD V Y ++ G +++A+ L D M +G P++ T
Sbjct: 739 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 798
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+ M G +A + EM ++G NP L YN L+ L G+ +A +++ MV
Sbjct: 799 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 858
Query: 283 EKG------KYIHLV 291
E G YI L+
Sbjct: 859 ENGITPDDSTYISLI 873
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 128/272 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T T+N+L+ G + E + P +YN +++
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 671
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +++ MS G ++TY ++ A + G++ + +L DE R G PD YN
Sbjct: 672 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 731
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ A ++ M++ P + + TLM GL G +D + DEM +G
Sbjct: 732 LINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERG 791
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I+ Y G+++ A + + M+ KG P + TYN++I+G C G+ D+A
Sbjct: 792 IQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAE 851
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
M+KEM G P+ Y +L+ L + A
Sbjct: 852 NMVKEMVENGITPDDSTYISLIEGLTTEDERA 883
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 104/213 (48%), Gaps = 6/213 (2%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
T+NI++ GK + LL +M R P+ TYN ++ + AAL+++ M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 540
Query: 142 KEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAG 199
+E G P+ + T++ G + G +D FDEM KG P+ V Y +I Y G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L+ A D M+ +G V TYN ++ M G+ EA +++EM +G P+ YN
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L++ G + +A E+ +M +G +V+
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+LL +L L + MK + S L+ L A F +M
Sbjct: 421 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAF----ALFADMFR 476
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ +M+ +AG+ +A +L M PN TYN++I GFC G+
Sbjct: 477 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQA 532
Query: 239 ACTMMKEMESR-GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +M+EM R G PN Y T++S G++ EA +V M+ KG+
Sbjct: 533 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 581
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 146/286 (51%), Gaps = 6/286 (2%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A T+N LI C G A V++ ++ + P +Y +L A YK
Sbjct: 32 AYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV---PDVVTYTILLEATCKRSGYKQAMK 88
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ +M D+G PDI+TYN+V+ + G++D L + G P+ +YNI+L L
Sbjct: 89 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 148
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
++ A L+ M + G P+V+ F L+ L R G ++ +++ GC P+ +
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ ++ +++KA D M+++G P++ +YN+++ C +G+ D A ++ ++
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +GC P + YNT++ L AGK EA E++ MV KG +++
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 314
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 142/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N+++ + G +E + P SYN +L L +
Sbjct: 93 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 152
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +M +G P+++T+N+++ R G ++ +L+++ + G +P+ +YN
Sbjct: 153 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 212
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH K K A+ L+ M G P ++ + TL+ L R+G +D ++ +KG
Sbjct: 213 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 272
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I AG+ ++A +L + M++KG P++ TY+++ G C + ++A
Sbjct: 273 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 332
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ G PN ++YN ++ L + A ++ +M+ G
Sbjct: 333 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 377
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 117/246 (47%), Gaps = 3/246 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNA++ G Q + +M E PD TYN ++ G+ +LDEM
Sbjct: 2 AYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEM 58
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R PD TY ILL K A+ LL+ M++ G P ++ + +++G+ + G +
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F + + GC P+ V Y +++ A E A++L M KG PNV T+N +
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C G + A +++++ GC PN L YN L+ K+ +A + MV +G
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238
Query: 287 YIHLVS 292
Y +VS
Sbjct: 239 YPDIVS 244
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 103/205 (50%), Gaps = 3/205 (1%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ YN ++ G+LD RL+ EM PD +TYN L+ L + AL +L+
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEM---PVEPDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M P V+ +T L++ + DEM +KGC PD+V Y V++ G
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
++ A + + + G PN +YN +++G C A ++++A +M EM +GC PN + +N
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+S L G + A EV+ + + G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYG 202
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P TFN+LI GL +E + + P SYN +LHA ++
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
M G PDI++YN ++ A R G++D LL ++ G +P +YN
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
++ L K K AL LLN M G P ++ ++T+ GL R + DA + F
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMG 342
Query: 173 ---------------------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F M GCMP+ YT++I G +++A+
Sbjct: 343 IRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEAR 402
Query: 206 DLFDGMITKG 215
DL D + ++
Sbjct: 403 DLLDELCSRA 412
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+NILI C G V A+ ++ K +P +Y+ ++ + + + + ++
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKE---GIKPGVVTYSTLMDGYCLVGEVQNAKQIFH 279
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M G P++ +YNI++ + ++D+ LL EM PD TYN L+ L K
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG 339
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ +ALNL+N M G V+ +T+L+D L + NLD F +M +G P + YT
Sbjct: 340 RITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYT 399
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G L+ AQ+LF ++ KG +V+TY MI G C G FDEA + +ME
Sbjct: 400 ALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDN 459
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + + ++ +L + +A +++ M+ KG
Sbjct: 460 GCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ L+ C GE A K++ R I+ + + RP YN I+ L
Sbjct: 106 VVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLL-RMIEDR--STRPNVVMYNTIIDGLCK 162
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M G PD +TY ++ LG+L LLDEM +P +
Sbjct: 163 DKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYI 222
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL++ L K A NLL M + G P V+ ++TLMDG G + K F M
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V Y +MI +++A +L M+ K +P+ TYNS+I G C +G+
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 342
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +M EM RG + + Y +L+ L L +A + M E+G
Sbjct: 343 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ T N L +C GEV + ++ + F+ SY +L+ L I +
Sbjct: 75 GYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQ---GFQMDHVSYGTLLNGLCKIGET 131
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + + + D P+++ YN ++ + +++ + L EM G PD TY L
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + + A +LL+ M +P V + L++ L + GN+ K M +G
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV Y+ ++ Y GE++ A+ +F M+ G PNV++YN MI G C + DEA
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++EM + P+ + YN+L+ L +G++ A ++ M +G+ +V+
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 139/283 (49%), Gaps = 7/283 (2%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP A T+ LI C G++ A +++ I L N P YN +++AL K
Sbjct: 182 FPD-AITYTTLIYGFCLLGQLMGAFSLLDEMI---LKNINPGVYIYNILINALCKEGNVK 237
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + M+ EG P ++TY+ +M +G++ ++ M + G +P+ ++YNI++
Sbjct: 238 EAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMI 297
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ L K + A+NLL M P + + +L+DGL ++G + + +EM ++G
Sbjct: 298 NGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQP 357
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
DVV YT ++ + L+KA LF M +G P ++TY ++I G C G+ A +
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQEL 417
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +GC + Y ++S L G EA + M + G
Sbjct: 418 FQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 460
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 134/288 (46%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T++ L+ C GEV A+++ ++ P SYN +++ L
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQ---MGVNPNVYSYNIMINGLCK 302
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++M + PD +TYN ++ + G++ L++EM G D T
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LL L K A L MKE G P++ +T L+DGL + G L + F +
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC DV YTVMI+ G ++A + M G +PN T+ +IR + D
Sbjct: 423 VKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDEND 482
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ EM ++G LV + V+++ + +A +++ M+ KG
Sbjct: 483 KAEKLLHEMIAKG----LLVLDFKVADVFVQNENDKAEKLLHEMIAKG 526
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
L P +N IL +L ++QY + +QM +G + +T NI++ LG++
Sbjct: 3 LVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMA 62
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+L ++ + G+ PD T N L+ L + +L+ + + GF + + TL+
Sbjct: 63 FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL 122
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+GL + G + ++ P+VV Y +I + +A DL+ M +G
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+ TY ++I GFC+ G+ A +++ EM + NP +YN L++ L G + EA +
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242
Query: 278 IRHMVEKG 285
+ M ++G
Sbjct: 243 LAVMTKEG 250
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 127/239 (53%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++H + + + K + M +GY PD+++Y+ V+ R G+LD+ +L++ M
Sbjct: 691 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 750
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G P+ + Y ++ +L + K A + M G P + +TTL+DG + G++
Sbjct: 751 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 810
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A FF EM ++ PDV+ YT +I+ + G++ +A LF M KG P+ T+ +
Sbjct: 811 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTEL 870
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+C AG +A + M GC+PN + Y TL+ L G L A+E++ M + G
Sbjct: 871 INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 130/268 (48%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ K++E + L +P Y +I+ L I + E + +M +G
Sbjct: 735 CRFGELDKVWKLIEVMKRKGL---KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 791
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y ++ + G + + EM +PD TY ++ + + A L
Sbjct: 792 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 851
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G +P + FT L++G +AG++ + M GC P+VV YT +I
Sbjct: 852 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 911
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G+L+ A +L M G PN+FTYNS++ G C +G +EA ++ E E+ G N + +
Sbjct: 912 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 971
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y TL+ +G++ +A E+++ M+ KG
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKG 999
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 110/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ M G +P+++TY ++ + G LD + LL EM + G P+ TYN +++ L
Sbjct: 886 VHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 945
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L+ + G + + +TTLMD ++G +D + EM KG P +V
Sbjct: 946 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIV 1005
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ V++ + G LE + L + M+ KG PN T+NS+++ +C+ A + K+M
Sbjct: 1006 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 1065
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SRG P+ Y LV A + EA + + M KG
Sbjct: 1066 CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKG 1104
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + LI C G++ A K F + + P +Y AI+
Sbjct: 785 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKF---FYEMHSRDITPDVLTYTAIISGFCQ 841
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I ++ +M +G PD +T+ ++ + G + R+ + M ++G SP+ T
Sbjct: 842 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 901
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K +A LL+ M ++G P++ + ++++GL ++GN++ E
Sbjct: 902 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G D V YT ++ +Y +GE++KAQ++ M+ KG P + T+N ++ GFC+ G +
Sbjct: 962 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1021
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ M ++G PN +N+LV L A + + M +G
Sbjct: 1022 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 1069
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 115/294 (39%), Gaps = 49/294 (16%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
KV + I S F RP N ++ ++ + L+ + Y+ D G P + +++
Sbjct: 579 KVAQSLISS--FWERPKLNVTDSF------VQFFDLLVYTYK---DWGSDPRV--FDVFF 625
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG-DKPLAALNLLNHMKEVGF 146
G L + R+ ++M G + N+ L L K K A+ + EVG
Sbjct: 626 QVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGV 685
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK--- 203
+V + ++ + + G + + M KG PDV+ Y+ ++ Y GEL+K
Sbjct: 686 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 745
Query: 204 --------------------------------AQDLFDGMITKGQLPNVFTYNSMIRGFC 231
A++ F MI +G LP+ Y ++I GFC
Sbjct: 746 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G A EM SR P+ L Y ++S G + EA ++ M KG
Sbjct: 806 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 859
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAI-----LHALLGI 58
N T T C GE+ A+++++ + L +P ++N + LH +L
Sbjct: 966 NADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGL---QPTIVTFNVLMNGFCLHGMLED 1022
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ KL+ W M +G AP+ T+N ++ L + +M G PD TY
Sbjct: 1023 GE-KLLNW----MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 1077
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K A L MK GF SV ++ L+ G + + FD+M
Sbjct: 1078 ENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRR 1137
Query: 179 KGCMPD 184
+G D
Sbjct: 1138 EGLAAD 1143
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G A TFN L+ C + A + + + P +Y ++
Sbjct: 1030 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV---GPDGKTYENLVKGHCK 1086
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R K +++Q+M +G++ + TY++++ + K + + D+M R G + D
Sbjct: 1087 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKE 143
++ KG +P ++ ++ + E
Sbjct: 1147 FDFFSDTKYKGKRPDTIVDPIDEIIE 1172
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-L 56
M+ G N LI CTC G + AR+++ + + F F SY ++ AL
Sbjct: 73 MLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHH-MTAHAFVLDVFTYSY--LMDALGK 129
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R K +E V+ M G PD + YN+++ + GK+D+ LL++M R G PD
Sbjct: 130 AGRAAKALE-VFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYNI++ VL + A + MK P V+ + TL++GL + D FDEM
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
CMPD+ + +I + AG +E A + ++ G +PN + YN++I GFC +G+
Sbjct: 249 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQV 308
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D+ + ++M C P+ + Y LV G + A E+++ MV +G
Sbjct: 309 DKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 357
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 140/291 (48%), Gaps = 7/291 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N LI + G + ++ F + K + +P S++ ++ L + + V+Q+M
Sbjct: 14 YNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 73
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G D+ N ++ RLG L Q RLL M F D TY+ L+ LGK +
Sbjct: 74 LGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRA 133
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL + ++M++ G P + + L+ L + G +D ++M KG MPD Y ++
Sbjct: 134 AKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIV 193
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + G EKA F M + P+V TYN+++ G + DEAC + EM++ C
Sbjct: 194 IDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKC 253
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG----KYIH--LVSKFKR 296
P+ + TL+ L AG++ +A E +V+ G YI+ L+S F R
Sbjct: 254 MPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCR 304
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 1/258 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N+LI G+ G + +E P +YN ++ L +Y+ + M
Sbjct: 155 YNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMK 214
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
++PD++TYN ++ +L + D+ L DEM + PD T+ L+ L K +
Sbjct: 215 RRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRME 274
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL + ++G P+ + L+ G R+G +D F +M C PD + YT+++
Sbjct: 275 DALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILV 334
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G A +L M+ +G P + TYN +IR MAG+ ++A T+ KEM ++G N
Sbjct: 335 LGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFN 394
Query: 253 PNFLVYNTLVSNLRNAGK 270
P+ Y+ L NL K
Sbjct: 395 PDMQTYSAL-PNLSTPNK 411
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + F T++ L+ G+ G A K +E F + P YN +L + LG +Q
Sbjct: 108 MTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYN-VLISCLG-KQ 165
Query: 61 YKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
K+ E + + M+ +G PD TYNIV+ G+ ++ + M R SPD TY
Sbjct: 166 GKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTY 225
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N LL+ L K + A +L + M+ P + F TL+D L++AG ++ +
Sbjct: 226 NTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVK 285
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G +P+ Y +I+ + +G+++K +LF MI P+ TY ++ GF G
Sbjct: 286 MGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSM 345
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++EM G P YN L+ +L AG++ +A+ + + M+ KG
Sbjct: 346 AMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 392
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 101/233 (43%), Gaps = 13/233 (5%)
Query: 77 APDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
APD++ YN ++ + G LD F RL E P+ +++ L+ L K +
Sbjct: 8 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQE---GSCKPNAVSFDTLVIFLCKMSRAT 64
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL + M G V TL+ R G L + M + DV Y+ ++
Sbjct: 65 DALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLM 124
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ AG KA ++F M G +P+ YN +I GK DEA ++++M +G
Sbjct: 125 DALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 184
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVI------RHMVEKGKYIHLVSKFKRYKR 299
P+ YN ++ L + G+ +A+ +H + Y L++ K+ +R
Sbjct: 185 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRR 237
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEA 239
C PDVV Y +I Y AG+ ++A D+F + +G PN ++++++ C + +A
Sbjct: 7 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ +EM G + V NTL+ G L +A ++ HM
Sbjct: 67 LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMT 109
>gi|147776740|emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
Length = 422
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 140/278 (50%), Gaps = 1/278 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW-VYQQM 71
F+ +I GE L + ++ F F+ +P N +L L+ R Y + +++
Sbjct: 85 FSDIIEIYGEANLPDQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIRPAFDLFKSA 144
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +PD +YNI+M A G L + L ++M + +PD +Y IL+ L + +
Sbjct: 145 HRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILMQGLCRKSQV 204
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A++LL M G+ P L +TTL++ L R L M KGC PD+V Y +
Sbjct: 205 NRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTV 264
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + G A + + M + G PN+ +Y +++ G C G +DEA ++EM S+G
Sbjct: 265 ILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGF 324
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+P+F V++ L++ N GKL EA EV+ M+ G+ H
Sbjct: 325 SPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXH 362
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 7/280 (2%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
LI + + LA+++ + + S NF+ +S++ ++ L RQ+ L++ + ++ E
Sbjct: 20 LIASQSDPLLAKEIFD--LASLQPNFKHSYSSFHILILKLGWARQFSLMQDLLMRLKSEQ 77
Query: 76 YA--PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL- 132
Y+ P + + I + + L DQ + M + P N LL +L +
Sbjct: 78 YSINPSLFSDIIEIYGEANLP--DQALKTFHSMLQFHSKPLPKHLNXLLQLLVSHRNYIR 135
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A +L G P + LM G+L F++M + PDV Y +++
Sbjct: 136 PAFDLFKSAHRYGVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKRDVAPDVESYRILM 195
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
++ +A DL + M+ KG +P+ +Y +++ C K EA ++ M+ +GCN
Sbjct: 196 QGLCRKSQVNRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCN 255
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + YNT++ G+ +A +V+ M G +L+S
Sbjct: 256 PDIVHYNTVILGFCREGRXLDACKVLEDMPSNGCSPNLMS 295
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G +++NIL+ C G++ +A + + K + P SY ++ L Q
Sbjct: 148 GVSPDTKSYNILMSAFCFNGDLSIAYTLFNQMFKR---DVAPDVESYRILMQGLCRKSQV 204
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M ++GY PD L+Y ++ + R KL + ++LL M G +PD YN +
Sbjct: 205 NRAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLKEAYKLLCRMKVKGCNPDIVHYNTV 264
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + + L A +L M G P+++ + TL+ GL G D K + +EM +KG
Sbjct: 265 ILGFCREGRXLDACKVLEDMPSNGCSPNLMSYGTLVSGLCDQGLYDEAKNYVEEMLSKGF 324
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P + +I + G+LE+A ++ M+ G+ + T+ ++I C K
Sbjct: 325 SPHFSVFHALINGFCNVGKLEEACEVLXEMLRHGEAXHTETWVAIIPRICEVDKLVRMEN 384
Query: 242 MMKEMESRGCNPN 254
+ E PN
Sbjct: 385 IFDEXLKLEITPN 397
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 122/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +++ LL K VY++M EG P + TY+ +M A R LL+EM
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM 253
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ +TY I + VLG+ + A +L M++ G P V+ +T L+D L AG L
Sbjct: 254 ETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKL 313
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D K + +M PD+V Y +++ + G+LE + + M G P+V TY +
Sbjct: 314 DKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTIL 373
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C +GK D+A M+ M RG PN YNTL+S L N +L EA E+ +M G
Sbjct: 374 VEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF A ++N LI + G A KV +R I L +P +Y+A++ AL
Sbjct: 183 MRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGL---KPSMKTYSALMVALGR 239
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R I + ++M G P+I TY I + R G++D + +L M G PD T
Sbjct: 240 RRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVT 299
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ L K A L M+ P ++ + TLM G+L+ K F+ EM
Sbjct: 300 YTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEME 359
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDVV YT+++ + +G++++A D+ D M +G +PN+ TYN++I G + D
Sbjct: 360 ADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLD 419
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + MES G P Y + G +A + M ++G
Sbjct: 420 EALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 134/260 (51%), Gaps = 2/260 (0%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A+K+ ++F KS P SYN ++ LLG + ++ +M + G P+I TYN+
Sbjct: 771 AKKLFDKFTKS--LGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNL 828
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + ++D+ L +EM G P+ T+NI++ L K + AL+L +
Sbjct: 829 LLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGD 888
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P+ + L+ GL +AG + F+EM + C P+ Y ++I + AG + A
Sbjct: 889 FSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIAC 948
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
DLF MI +G P++ +Y ++ M G+ D+A +E++ G +P+ + YN +++ L
Sbjct: 949 DLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGL 1008
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ +L EA + M +G
Sbjct: 1009 GKSRRLEEALSLFSEMKNRG 1028
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++ AL + + +Y +M + PD++TY +M G L+ R EM
Sbjct: 299 TYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G++PD TY IL+ L K K A ++L+ M+ G P++ + TL+ GL L
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRL 418
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV------ 220
D F+ M + G P Y + I Y G+ EKA D F+ M +G +P++
Sbjct: 419 DEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNAS 478
Query: 221 -----------------------------FTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
TYN M++ + AG+ D+A ++ EM S GC
Sbjct: 479 LYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGC 538
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+ +V N+L+ L AG++ EA ++
Sbjct: 539 EPDIIVVNSLIDTLYKAGRVDEAWQM 564
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T NI+I + K ++ + + +F P +Y ++ LL + + ++++M
Sbjct: 860 THNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEM 919
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D P+ YNI++ + G ++ L M + G PD +Y IL+ L +
Sbjct: 920 PDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRV 979
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A++ +K G DP + + +++GL ++ L+ F EM N+G P++ Y +
Sbjct: 980 DDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNAL 1039
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + AG +++A +F+ + G PNVFTYN++IRG +G D A ++ K+M GC
Sbjct: 1040 ILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGC 1099
Query: 252 NPN 254
+PN
Sbjct: 1100 SPN 1102
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 135/320 (42%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+ +LI G K E + K + + +P +Y ++
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD 347
Query: 61 YKLIEWVYQQMSDEGYAPD-----------------------------------ILTYNI 85
+ ++ + +M +GYAPD + TYN
Sbjct: 348 LETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNT 407
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ L +LD+ L + M G +P ++Y + + GK P AL+ MK+ G
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
PS+ + L+ G + K F+++ N G PD V Y +M+ Y AG+++KA
Sbjct: 468 IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKAT 527
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L M+++G P++ NS+I AG+ DEA M ++ P + YN L++ L
Sbjct: 528 KLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGL 587
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
GKL +A ++ M E G
Sbjct: 588 GKEGKLLKALDLFGSMKESG 607
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N+L+ G+ ++ E + + +P ++N I+ AL+ +Y ++
Sbjct: 825 TYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEI 884
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++P TY ++ + G+ ++ ++ +EM P+ YNIL++ GK
Sbjct: 885 ISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNV 944
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L M + G P + +T L++ L G +D ++F+E+ G PD V Y +M
Sbjct: 945 NIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLM 1004
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + LE+A LF M +G P ++TYN++I F AG D+A M +E++ G
Sbjct: 1005 INGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGL 1064
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YN L+ +G A V + M+ G
Sbjct: 1065 EPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVG 1098
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 133/312 (42%), Gaps = 41/312 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G+ T+ IL+ C G+V A +++ ++ P ++YN ++ LL
Sbjct: 358 MEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM---RVRGIVPNLHTYNTLISGLLN 414
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRL----------- 102
+R+ ++ M G AP +Y + + +LG LD F ++
Sbjct: 415 LRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAA 474
Query: 103 -------LDEMGR-------------SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
L EMGR G SPD TYN+++ K + A LL M
Sbjct: 475 CNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEML 534
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G +P ++ +L+D L +AG +D F + + P VV Y ++IT G+L
Sbjct: 535 SEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLL 594
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA DLF M G PN T+N+++ C D A M M C+P+ L YNT++
Sbjct: 595 KALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTII 654
Query: 263 SNLRNAGKLAEA 274
L G+ A
Sbjct: 655 YGLIKEGRAGYA 666
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 133/280 (47%), Gaps = 1/280 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA ++ + I G++G K ++ F K K P + NA L++L + + +
Sbjct: 432 GVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREA 491
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ + + G +PD +TYN++M + G++D+ +LL EM G PD N L+
Sbjct: 492 KDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDT 551
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + A + +K++ P+V+ + L+ GL + G L F M GC P+
Sbjct: 552 LYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPN 611
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V + ++ ++ A +F M P+V TYN++I G G+ A
Sbjct: 612 TVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYH 671
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+M+ + +P+ + TL+ + G++ +A +++ V +
Sbjct: 672 QMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQ 710
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 107/226 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I F T T+ LI + G + + ++ F + + +P YN +++
Sbjct: 884 IISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGN 943
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++++M EG PD+ +Y I++ + G++D +E+ +G PD +YN+
Sbjct: 944 VNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNL 1003
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ LGK + AL+L + MK G P + + L+ AG +D F+E+ G
Sbjct: 1004 MINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMG 1063
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
P+V Y +I + +G ++A +F M+ G PN T+ +
Sbjct: 1064 LEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 127/290 (43%), Gaps = 13/290 (4%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G P TFN L+ C C V LA K+ F + + N P +YN I++ L+
Sbjct: 603 MKESGCPPNTVTFNALLDCLCKNDAVDLALKM---FCRMTIMNCSPDVLTYNTIIYGLIK 659
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE-MGRSGFSPDFH 116
+ W Y QM + +PD +T ++ + G+++ +++ E + +SG
Sbjct: 660 EGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQ 718
Query: 117 TYNILLHVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ L+ + + ++ ++ L D +L ++ +A LDA K F
Sbjct: 719 VWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKA--LDAKKLFD 776
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ G P Y ++ + E A LF M G PN+FTYN ++ +
Sbjct: 777 KFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKS 836
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ DE + EM RGC PN + +N ++S L + + +A ++ ++
Sbjct: 837 KRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIIS 886
>gi|159464329|ref|XP_001690394.1| hypothetical protein CHLREDRAFT_114572 [Chlamydomonas reinhardtii]
gi|158279894|gb|EDP05653.1| predicted protein [Chlamydomonas reinhardtii]
Length = 287
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 137/274 (50%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +I CG R+ +E + + ++Y+A+++ + + L + VY+QM
Sbjct: 2 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 61
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+EG +P+++TYNI++ + K + RL + RSG + TYN ++ K +P
Sbjct: 62 LEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQP 121
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL + M G PS +T L+ + G ++ F +M +GC +V+ Y+ +
Sbjct: 122 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRGCERNVITYSSL 181
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I++ AG E A +LF M + PNV TYNS+I G +++A + ++M+++GC
Sbjct: 182 ISACEKAGRWEMALELFSKMHKENCKPNVVTYNSLIAACSHGGHWEKASELFEQMQTQGC 241
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y L++ G+ A + M +G
Sbjct: 242 KPDSITYCGLITAYERGGQWRRALKAFEQMQSQG 275
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 86/170 (50%)
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+TY ++ G + AL L+ M+ G D +V ++ LM+ +A LD + + +
Sbjct: 1 YTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQ 60
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +GC P++V Y ++I + + + + L ++ G V TYN++I +G+
Sbjct: 61 MLEEGCSPNLVTYNILIDVEASKRKTTERRRLAVALVRSGIQAEVRTYNTVISACNKSGQ 120
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++A + ++M + G P+ Y L+S G++ +A ++ R M+ +G
Sbjct: 121 PEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALDIFRDMIRRG 170
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1164
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 130/239 (54%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++H + + + + M +GY PD+++Y+ V+ R G+LD+ +L+++M
Sbjct: 671 SYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKM 730
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G P+ +TY ++ +L + K A + M G P + +TTL+DG + G++
Sbjct: 731 KQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDI 790
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A FF EM ++ PDV+ YT +I+ + G++ +A LF M+ +G P++ T+ +
Sbjct: 791 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTEL 850
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C AG +A + M GC+PN + Y TL+ L G L A+E++ M + G
Sbjct: 851 MNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ K++E+ + L +P +Y +I+ L I + E + +M +G
Sbjct: 715 CRFGELDKVWKLIEKMKQKGL---KPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGIL 771
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD + Y ++ + G + + EM +PD TY ++ + + A L
Sbjct: 772 PDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 831
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G +P ++ FT LM+G +AG++ + M GC P+VV YT +I
Sbjct: 832 FHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 891
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G+L+ A +L M G PN+FTYNS++ G C +G +EA ++ E E+ G N + +
Sbjct: 892 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 951
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y TL+ +G++ +A E++ M+ KG
Sbjct: 952 YTTLMDAYCKSGEMDKAQEILTEMLGKG 979
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 126/272 (46%), Gaps = 11/272 (4%)
Query: 18 CTCGEVGLARKVVE----RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
C G++ A K+ R ++ + F N Y H R V+ M
Sbjct: 820 CQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFR-------VHNHMIQ 872
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G +P+++TY ++ + G LD + LL EM + G P+ TYN +++ L K
Sbjct: 873 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ L+ + G + + +TTLMD ++G +D + EM KG P +V + V++
Sbjct: 933 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G LE + L + M+ KG PN T+N +++ +C+ A + K+M SRG P
Sbjct: 993 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEP 1052
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y LV NA + EA + + M KG
Sbjct: 1053 DGKTYENLVKGHCNARNMKEAWFLFQEMKGKG 1084
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + L+ C G++ A K F + + P +Y AI+
Sbjct: 765 MIGQGILPDTIVYTTLVDGFCKRGDIRAASKF---FYEMHSRDITPDVLTYTAIISGFCQ 821
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I ++ +M G PDI+T+ +M + G + R+ + M ++G SP+ T
Sbjct: 822 IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVT 881
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K +A LL+ M ++G P++ + ++++GL ++GN++ E
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G D V YT ++ +Y +GE++KAQ++ M+ KG P + T+N ++ GFC+ G +
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ M ++G PN +N LV L A + + M +G
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRG 1049
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 100/217 (46%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M G P+I TYN ++ + G +++ +L+ E +G + D TY L+ K
Sbjct: 903 HEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKS 962
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A +L M G P+++ F LM+G G L+ + + M KG P+ +
Sbjct: 963 GEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 1022
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ Y L+ A ++ M ++G P+ TY ++++G C A EA + +EM+
Sbjct: 1023 NCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKG 1082
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + + Y+ L+ K EA E+ M G
Sbjct: 1083 KGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDG 1119
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 14/255 (5%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
KV + I S F RP N + ++ + L+ + Y+ D G P + +++
Sbjct: 559 KVAQSLISS--FWERPKLNVTESF------VQFFDLLVYTYK---DWGSDPRV--FDVFF 605
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG-DKPLAALNLLNHMKEVGF 146
G L + ++ ++M G + N+ L L K +K A+ + EVG
Sbjct: 606 QVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGV 665
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
+V + ++ + + G ++ + M KG PDV+ Y+ +I Y GEL+K
Sbjct: 666 CWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWK 725
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
L + M KG PN +TY S+I C K EA EM +G P+ +VY TLV
Sbjct: 726 LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFC 785
Query: 267 NAGKLAEAHEVIRHM 281
G + A + M
Sbjct: 786 KRGDIRAASKFFYEM 800
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 1/176 (0%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ D +++ VL + A + M G SV + LS+ N A
Sbjct: 594 WGSDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATA 653
Query: 171 YF-FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
F E G +V Y ++I G + +A L M KG P+V +Y+++I G
Sbjct: 654 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVING 713
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+C G+ D+ ++++M+ +G PN Y +++ L KLAEA E M+ +G
Sbjct: 714 YCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQG 769
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 13/172 (7%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAI-----LHALLGIRQYKLIEWVYQQMS 72
C GE+ A++++ + L +P ++N + LH +L + KL+ W M
Sbjct: 960 CKSGEMDKAQEILTEMLGKGL---QPTIVTFNVLMNGFCLHGMLEDGE-KLLNW----ML 1011
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+G AP+ T+N ++ L + +M G PD TY L+
Sbjct: 1012 AKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMK 1071
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
A L MK GF SV ++ L+ G + + FD+M G D
Sbjct: 1072 EAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAAD 1123
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 63/146 (43%), Gaps = 6/146 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G A TFN L+ C + A + + + P +Y ++
Sbjct: 1010 MLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGV---EPDGKTYENLVKGHCN 1066
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R K +++Q+M +G++ + TY++++ ++ K + + D+M R G + D
Sbjct: 1067 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEI 1126
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKE 143
++ KG +P ++ ++ + E
Sbjct: 1127 FDFFSDTKYKGKRPDTIVDPIDEIIE 1152
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 144/275 (52%), Gaps = 3/275 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+FNIL+ G +E F + P +Y+ ++ L + + + M
Sbjct: 81 SFNILVTGLCRAGKIETALE-FFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESM 139
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +PD++TY I++ + K+ +L EM +G P+ TYN LLH L + +
Sbjct: 140 KARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRV 199
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTV 190
AL L+ M G P+V+ + TL+DGL + G + DAC D M +KG PD++ Y +
Sbjct: 200 SDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD-MIDKGGTPDLMIYNM 258
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I A +++++ L ++ G P+V TY+S+I G C + + DEAC ++ ++SRG
Sbjct: 259 LINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG 318
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C P+ ++Y+TL+ L AGK+ EA ++ M G
Sbjct: 319 CPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 148/285 (51%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ IL+ C +V A +V+ + + P +YN++LH L
Sbjct: 139 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV---PNLVTYNSLLHGLCR 195
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + + M+ G P+++TY ++ ++G++ +L +M G +PD
Sbjct: 196 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 255
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEM 176
YN+L++ L K D+ ++ LL G P V+ +++++ GL R+ LD AC+ +
Sbjct: 256 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL-YV 314
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++GC PDV+ Y+ +I AG++++A DL++ M G +V TY+++I G C AG+
Sbjct: 315 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRV 374
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
DEA ++ M G P+ + YN+L+ L + L EA E++ M
Sbjct: 375 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 128/243 (52%), Gaps = 2/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+++ L + + +++ M +P ++TYN ++ +R GKL++ L
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
EM S D ++NIL+ L + K AL M + P+V+ ++ L+DGL +
Sbjct: 68 FQEM-LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDD-RCSPNVITYSVLIDGLCK 125
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
A + + M +GC PDV+ YT+++ ++ A ++ M+ G +PN+ T
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS++ G C A + +A +M++M RGC PN + Y TL+ L G++ +A ++ M+
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245
Query: 283 EKG 285
+KG
Sbjct: 246 DKG 248
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 26 ARKVVERFIKSKLFNFR---PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
AR+V + + R P +Y ++ L + + K + M D+G PD++
Sbjct: 196 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 255
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN+++ + ++D+ LL G PD TY+ +++ L + ++ A LL ++K
Sbjct: 256 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 315
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P V+ ++TL+DGL +AG +D ++ M GC DVV Y+ +I AG ++
Sbjct: 316 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVD 375
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L M+ G P+ TYNS+I+G C DEA +++EME C P+ + YN L+
Sbjct: 376 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 435
Query: 263 SNLRNAGKL-AEAHEVIRHMVEKG 285
+ ++ + A + + M++ G
Sbjct: 436 HGMCRMERVDSAALDYFQEMIDNG 459
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
G P+ TYN L+ L K ++P A L HMK V PS++ + TL+DGL R G L+
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
F EM ++ DV+ + +++T AG++E A + F M + PNV TY+ +I G
Sbjct: 65 MALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDG 122
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
C A + +A +++ M++RGC+P+ + Y LV L K+A A EV+R M++ G +
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182
Query: 290 LVS 292
LV+
Sbjct: 183 LVT 185
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G +N+LI C +V + ++ R + +P +Y+++++ L
Sbjct: 244 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG---GIKPDVVTYSSVIYGL-- 298
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R +L E + + G PD++ Y+ ++ + GK+D+ L + M G D
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ L+ L K + A LL M +G PS + + +L+ GL +LD +E
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQ-DLFDGMITKGQLPNVFTYNSMIRGF 230
M C P V Y ++I ++ A D F MI G +P+ TY+ ++ G
Sbjct: 419 MERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGL 474
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+ M+ +G D++TY+ ++ + G++D+ H LL M R G P TYN L+ L
Sbjct: 345 LYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLC 404
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-FFDEMANKGCMPDV 185
+ A+ L+ M+ PS + + L+ G+ R +D+ +F EM + G +PD
Sbjct: 405 DLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDH 464
Query: 186 VCYTVMITSYIAAGELEKAQDL-FDGMITKG 215
+ Y++++ + +L + + L D M+ G
Sbjct: 465 ITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + GC P+VV Y +I E ++AQ+LF+ M + P++ TYN+++ G GK
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ A + +EM R + + + +N LV+ L AGK+ A E R M ++
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR 108
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T++ LI C G V A ++ R ++ P +YN+++ L
Sbjct: 349 MTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR---MGTPPSTMTYNSLIKGLCD 405
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRL--GKLDQFHRLLDEMGRSGFS 112
+ + ++M AP +TYNI+ MC R+ LD F ++D +G
Sbjct: 406 LNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMID----NGVI 461
Query: 113 PDFHTYNILLHVLGKGDKPLAALN--LLNHMKEVGF 146
PD TY+ILL L K K L L +L+ M ++G+
Sbjct: 462 PDHITYSILLEGLKKS-KDLHELRHLVLDQMVQLGY 496
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N+++ E G + V K F SYNA+L L +++ +E + +M
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
AP+I+T+N ++ R G ++ H +L +M G +PD Y ++ + K
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +LN M G P+V+ + T++ GL A + EM K C D V + +++
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G +++ +L + M++ G +P+V TY ++I GFC G DEA ++K M S GC P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y ++ L +AG+ +A E++ M+++G
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI GL +V E + P Y I+ + ++ + +M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+++ YN V+ + + LL EM + D T+NIL+ +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ LL M G P V+ +TT+++G + G +D M++ GC P+ V YT++
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ +AG A++L MI +G PN T+N++I C G ++A ++K+M GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + Y+T++ L AGK EA E++ MV KG
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G R + +I C G + +A +++ R + +P YN +L L
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS---YGLKPNVVCYNTVLKGLCS 333
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++K E + +M + D +T+NI++ + G +D+ LL++M G PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL AG + +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC P+ V + +I G +E+A +L M+ G P++ +Y+++I G AGK +
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ L G++
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRV 547
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN---GFCK 403
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + MS G P+ ++Y IV+ G+ L+ +M + G P+ T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AG + + M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + + G + K +FD + + YN++I C + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A M S GC PN Y L+ L + G EA E++ + +G HL+ F
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHF 641
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +MS +G AP Y++++ A R G R+L+ M G + D N++L+ +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ LL + G + ++ + ++ GL A + DEM C P++V
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I G E+ ++ M G P++ Y ++I G C G + A ++ M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S G PN + YNT++ L +A + EA E++ M +K
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ T+ V+ G++ +LDEM G +P Y+++L + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G + +++ + G +D ++A GC D+V Y ++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A ++L D M+ PN+ T+N++I C G F+ ++ +M GC P+ +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G L A+E++ M G
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYG 316
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ YN ++ R G Q P+ +T+ ++ L + AL +L
Sbjct: 78 GVVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ M G P + +++ R+G + M KGC D +++ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G +++A L + G ++ +YN++++G CMA ++ + +M EM C PN + +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NTL+ L G HEV+ M E G
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHG 281
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N+++ E G + V K F SYNA+L L +++ +E + +M
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
AP+I+T+N ++ R G ++ H +L +M G +PD Y ++ + K
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +LN M G P+V+ + T++ GL A + EM K C D V + +++
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G +++ +L + M++ G +P+V TY ++I GFC G DEA ++K M S GC P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y ++ L +AG+ +A E++ M+++G
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI GL +V E + P Y I+ + ++ + +M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+++ YN V+ + + LL EM + D T+NIL+ +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ LL M G P V+ +TT+++G + G +D M++ GC P+ V YT++
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ +AG A++L MI +G PN T+N++I C G ++A ++K+M GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + Y+T++ L AGK EA E++ MV KG
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G R + +I C G + +A +++ R + +P YN +L L
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS---YGLKPNVVCYNTVLKGLCS 333
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++K E + +M + D +T+NI++ + G +D+ LL++M G PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL AG + +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC P+ V + +I G +E+A +L M+ G P++ +Y+++I G AGK +
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ L G++
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRV 547
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN---GFCK 403
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + MS G P+ ++Y IV+ G+ L+ +M + G P+ T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AG + + M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + + G + K +FD + + YN++I C + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A M S GC PN Y L+ L + G EA E++ + +G HL+ F
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHF 641
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +MS +G AP Y++++ A R G R+L+ M G + D N++L+ +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ LL + G + ++ + ++ GL A + DEM C P++V
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I G E+ ++ M G P++ Y ++I G C G + A ++ M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S G PN + YNT++ L +A + EA E++ M +K
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ T+ V+ G++ +LDEM G +P Y+++L + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G + +++ + G +D ++A GC D+V Y ++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A ++L D M+ PN+ T+N++I C G F+ ++ +M GC P+ +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G L A+E++ M G
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYG 316
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ YN ++ R G Q P+ +T+ ++ L + AL +L
Sbjct: 78 GVVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ M G P + +++ R+G + M KGC D +++ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G +++A L + G ++ +YN++++G CMA ++ + +M EM C PN + +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NTL+ L G HEV+ M E G
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHG 281
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N+++ E G + V K F SYNA+L L +++ +E + +M
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
AP+I+T+N ++ R G ++ H +L +M G +PD Y ++ + K
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +LN M G P+V+ + T++ GL A + EM K C D V + +++
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G +++ +L + M++ G +P+V TY ++I GFC G DEA ++K M S GC P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y ++ L +AG+ +A E++ M+++G
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI GL +V E + P Y I+ + ++ + +M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+++ YN V+ + + LL EM + D T+NIL+ +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ LL M G P V+ +TT+++G + G +D M++ GC P+ V YT++
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ +AG A++L MI +G PN T+N++I C G ++A ++K+M GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + Y+T++ L AGK EA E++ MV KG
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G R + +I C G + +A +++ R + +P YN +L L
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS---YGLKPNVVCYNTVLKGLCS 333
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++K E + +M + D +T+NI++ + G +D+ LL++M G PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL AG + +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC P+ V + +I G +E+A +L M+ G P++ +Y+++I G AGK +
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ L G++
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRV 547
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN---GFCK 403
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + MS G P+ ++Y IV+ G+ L+ +M + G P+ T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AG + + M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + + G + K +FD + + YN++I C + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A M S GC PN Y L+ L + G EA E++ + +G HL+ F
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHF 641
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +MS +G AP Y++++ A R G R+L+ M G + D N++L+ +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ LL + G + ++ + ++ GL A + DEM C P++V
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I G E+ ++ M G P++ Y ++I G C G + A ++ M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S G PN + YNT++ L +A + EA E++ M +K
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ T+ V+ G++ +LDEM G +P Y+++L + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G + +++ + G +D ++A GC D+V Y ++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A ++L D M+ PN+ T+N++I C G F+ ++ +M GC P+ +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G L A+E++ M G
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYG 316
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ YN ++ R G Q P+ +T+ ++ L + AL +L
Sbjct: 78 GVVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ M G P + +++ R+G + M KGC D +++ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G +++A L + G ++ +YN++++G CMA ++ + +M EM C PN + +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NTL+ L G HEV+ M E G
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHG 281
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 143/279 (51%), Gaps = 6/279 (2%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A T+N LI C G A V++ ++ + P +Y +L A YK
Sbjct: 158 AYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV---PDVVTYTILLEATCKRSGYKQAMK 214
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ +M D+G PDI+TYN+V+ + G++D L + G P+ +YNI+L L
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
++ A L+ M + G P+V+ F L+ L R G ++ +++ GC P+ +
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ ++ +++KA D M+++G P++ +YN+++ C +G+ D A ++ ++
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +GC P + YNT++ L AGK EA E++ MV KG
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 433
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 142/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N+++ + G +E + P SYN +L L +
Sbjct: 219 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 278
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +M +G P+++T+N+++ R G ++ +L+++ + G +P+ +YN
Sbjct: 279 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 338
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH K K A+ L+ M G P ++ + TL+ L R+G +D ++ +KG
Sbjct: 339 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 398
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I AG+ ++A +L + M++KG P++ TY+++ G C + ++A
Sbjct: 399 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ G PN ++YN ++ L + A ++ +M+ G
Sbjct: 459 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 503
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 3/250 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YNA++ G Q + +M E PD TYN ++ G+ +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAV 180
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LDEM R PD TY ILL K A+ LL+ M++ G P ++ + +++G+ +
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G +D F + + GC P+ V Y +++ A E A++L M KG PNV T
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N +I C G + A +++++ GC PN L YN L+ K+ +A + MV
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360
Query: 283 EKGKYIHLVS 292
+G Y +VS
Sbjct: 361 SRGCYPDIVS 370
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P TFN+LI C G V A +V+E+ K + P SYN +LHA
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK---YGCTPNSLSYNPLLHAFCK 345
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ M G PDI++YN ++ A R G++D LL ++ G +P +
Sbjct: 346 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 405
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF---- 172
YN ++ L K K AL LLN M G P ++ ++T+ GL R + DA + F
Sbjct: 406 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 465
Query: 173 ------------------------------FDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F M GCMP+ YT++I G ++
Sbjct: 466 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 525
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIR 228
+A+DL D + ++G + IR
Sbjct: 526 EARDLLDELCSRGVVRKSLINKGAIR 551
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD +I A+G +A+ + P+V YN+M+ G+C AG+ D A +
Sbjct: 94 PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMVAGYCGAGQLDAARRL 148
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ EM P+ YNTL+ L G+ A A V+ M+ +
Sbjct: 149 VAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRR 187
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 137/272 (50%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N+++ E G + V K F SYNA+L L +++ +E + +M
Sbjct: 185 NLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR 244
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
AP+I+T+N ++ R G ++ H +L +M G +PD Y ++ + K
Sbjct: 245 VDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEV 304
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +LN M G P+V+ + T++ GL A + EM K C D V + +++
Sbjct: 305 ANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVD 364
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G +++ +L + M++ G +P+V TY ++I GFC G DEA ++K M S GC P
Sbjct: 365 FFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKP 424
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y ++ L +AG+ +A E++ M+++G
Sbjct: 425 NTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI GL +V E + P Y I+ + ++ + +M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+++ YN V+ + + LL EM + D T+NIL+ +
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ LL M G P V+ +TT+++G + G +D M++ GC P+ V YT++
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ +AG A++L MI +G PN T+N++I C G ++A ++K+M GC
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + Y+T++ L AGK EA E++ MV KG
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G R + +I C G + +A +++ R + +P YN +L L
Sbjct: 277 MSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPS---YGLKPNVVCYNTVLKGLCS 333
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++K E + +M + D +T+NI++ + G +D+ LL++M G PD T
Sbjct: 334 AERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVIT 393
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL AG + +M
Sbjct: 394 YTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMI 453
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC P+ V + +I G +E+A +L M+ G P++ +Y+++I G AGK +
Sbjct: 454 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTE 513
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ L G++
Sbjct: 514 EALELLNVMVNKGISPNTIIYSSIACALSREGRV 547
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 133/298 (44%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVIN---GFCK 403
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + MS G P+ ++Y IV+ G+ L+ +M + G P+ T
Sbjct: 404 EGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVT 463
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AG + + M
Sbjct: 464 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMV 523
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + + G + K +FD + + YN++I C + D
Sbjct: 524 NKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETD 583
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A M S GC PN Y L+ L + G EA E++ + +G HL+ F
Sbjct: 584 RAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHF 641
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 102/218 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +MS +G AP Y++++ A R G R+L+ M G + D N++L+ +
Sbjct: 133 VLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAIC 192
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ LL + G + ++ + ++ GL A + DEM C P++V
Sbjct: 193 EQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIV 252
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I G E+ ++ M G P++ Y ++I G C G + A ++ M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S G PN + YNT++ L +A + EA E++ M +K
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 91/208 (43%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ T+ V+ G++ +LDEM G +P Y+++L + ++ +
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G + +++ + G +D ++A GC D+V Y ++
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A ++L D M+ PN+ T+N++I C G F+ ++ +M GC P+ +
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G L A+E++ M G
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYG 316
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ YN ++ R G Q P+ +T+ ++ L + AL +L
Sbjct: 78 GVVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVL 134
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ M G P + +++ R+G + M KGC D +++ +
Sbjct: 135 DEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G +++A L + G ++ +YN++++G CMA ++ + +M EM C PN + +
Sbjct: 195 GCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTF 254
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NTL+ L G HEV+ M E G
Sbjct: 255 NTLIGYLCRNGLFERVHEVLAQMSEHG 281
>gi|3193306|gb|AAC19289.1| contains similarity to Arabidopsis membrane-associated
salt-inducible-like protein (GB:AL021637) [Arabidopsis
thaliana]
Length = 991
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-- 61
+G+P T F LI E L KV+ F K FNF P N IL L+ R Y
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K E +++ G P+ +YN++M A L ++L +M PD +Y IL
Sbjct: 173 KAFE-LFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + + A+ LL+ M GF P L +TTL++ L R L M KGC
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y MI + A+ + D M++ G PN +Y ++I G C G FDE
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKK 351
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
++EM S+G +P+F V N LV + GK+ EA +V+ +++ G+ +H
Sbjct: 352 YLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 399
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 111/231 (48%), Gaps = 6/231 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G R++N+L+ C ++ +A ++ + ++ + P +SY ++ Q
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV---PDVDSYKILIQGFCRKGQ 240
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M ++G+ PD L+Y ++ + R +L + ++LL M G +PD YN
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + D+ + A +L+ M G P+ + + TL+ GL G D K + +EM +KG
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKG 360
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
P ++ + + G++E+A D+ + ++ G+ + T+ +I C
Sbjct: 361 FSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLIC 411
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 141/279 (50%), Gaps = 11/279 (3%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A TFNIL+ C G++ A+ +V+ I+ + P +Y+++++ L +
Sbjct: 10 AVTFNILVDTLCKKGKISEAQGIVKTMIEKGV---EPNTVTYSSLMNGYLLQNRVFEARK 66
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ M G PD+L+YNI++ + ++D+ ++ DEM G P+ TYN LL
Sbjct: 67 VFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFW 126
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L M G P ++ ++ + GLS+ G LD F EM N PD+V
Sbjct: 127 K-----QKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLV 181
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I + +G+LE A++LF + KG LP+V ++ S+I G C G DEA ++M
Sbjct: 182 IYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQM 241
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E GC P+ YN +V + A ++ + M ++G
Sbjct: 242 ERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRG 280
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 94/169 (55%), Gaps = 5/169 (2%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
PD T+NIL+ L K K A ++ M E G +P+ + +++LM+G + +
Sbjct: 8 PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F+ M +GC+PDV+ Y ++I A +++A+ +FD M +G +PN TYN+++ GF
Sbjct: 68 FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF-- 125
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + + K+M ++GC+P+ + Y+ + L G L +A E+ R M
Sbjct: 126 ---WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREM 171
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 5/208 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD +T+NI++ + GK+ + ++ M G P+ TY+ L++ ++ A +
Sbjct: 8 PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
N M G P VL + L++G +A +D K FDEM+ +G +P+ Y ++
Sbjct: 68 FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLL----- 122
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G ++ LF M +G P++ TY+ + G G D+A + +EM++ NP+ ++
Sbjct: 123 GGFWKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ + +GKL +A E+ + KG
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKG 210
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPD V + +++ + G++ +AQ + MI KG PN TY+S++ G+ + + EA
Sbjct: 7 MPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARK 66
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M +RGC P+ L YN L++ A ++ EA ++ M +G
Sbjct: 67 VFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRG 110
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 70/155 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++I + + G + +E F + + P YN ++ A+ + + ++ ++
Sbjct: 147 TYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKL 206
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G PD+ ++ ++ R G LD+ ++ +M R G PD +YN+++ + +
Sbjct: 207 HVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGA 266
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
A L M + GF L T D LS+ NL
Sbjct: 267 SRAEQLFQEMFDRGFSADALTRTLAADLLSKDDNL 301
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 142/277 (51%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G G A V++ ++ P +Y +L A YK +
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCV---PDVVTYTILLEATCKRSGYKQAMKLL 214
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G APDI+TYN+V+ + G++D L + G P+ +YNI+L L
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
++ A L+ M + G+ P+V+ F L+ L R G ++ D++ GC P+ + Y
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ ++ ++++A + M+++G P++ +YN+++ C G+ D A ++ +++
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC P + YNT++ L AGK EA E++ MV KG
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKG 431
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 143/275 (52%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
T+N+++ + G +E F+KS P SYN +L L +++ E + +
Sbjct: 228 TYNVVVNGICQEGRVDDAIE-FLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 286
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
MS +GY P+++T+N+++ R G ++ +LD++ + G +P+ +YN +LH K K
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+ + M G P ++ + TL+ L R G +DA ++ +KGC P ++ Y
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I AG+ ++A +L + M+TKG P++ TY+++ G C + +EA +++ G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN ++YN ++ L + A ++ +M+ G
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNG 501
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 117/250 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G+P TFN+LI GL +E + + P SYN ILHA ++
Sbjct: 287 MSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKK 346
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M G PDI++YN ++ A R G++D LL ++ G +P +YN
Sbjct: 347 MDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 406
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K AL LLN M G P ++ ++T+ GL R ++ F ++ + G
Sbjct: 407 VIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMG 466
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y ++ E A DLF MI+ G +PN TY +I G G EA
Sbjct: 467 IRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEAR 526
Query: 241 TMMKEMESRG 250
++ E+ SRG
Sbjct: 527 ELLGELCSRG 536
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 124/276 (44%), Gaps = 11/276 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G AR+V L P +YNA++ Q ++ + ++D
Sbjct: 104 LCASGRTAEARRV--------LAACEPDVMAYNAMVAGYCVTGQ---LDAARRLVADMPM 152
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD TYN ++ G+ +LD+M R G PD TY ILL K A+
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK 212
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL+ M+ G P ++ + +++G+ + G +D F + + GC P+ V Y +++
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLC 272
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A E A+ L M KG PNV T+N +I C G + A ++ ++ GC PN L
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN ++ K+ A + MV +G Y +VS
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVS 368
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 144/289 (49%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
I+ G T TF LI G+VG + VE F +P +Y I++ L I +
Sbjct: 37 IKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGET 96
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
L ++++M + G +++TY+ ++ + + ++++ + M SP TY L
Sbjct: 97 ALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSL 156
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L + A LLN M + P+V+ F L+D + G + A + M G
Sbjct: 157 IQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDVV Y ++ Y E+ +A+ LFD MITKG P+VF+Y+ +I G+C A + DEA
Sbjct: 217 EPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQ 276
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ EM +G PN + YNTL+ L G+L EA ++ ++M G +L
Sbjct: 277 LFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNL 325
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T++ LI + + + ++ F K + P +Y +++ L +
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + +M+ P+++T+N+++ + GK+ +L M G PD TYN
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + + A L + M G P V ++ L++G +A +D K F+EM ++G
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQG 285
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y +I G L +AQDLF M T G LPN++TY ++ GFC G +A
Sbjct: 286 STPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAF 345
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + M+S PN ++YN LV+ + +G L +A E+ +
Sbjct: 346 RLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSEL 386
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN+L+ C G+V A V++ + P +YN++++ + ++
Sbjct: 187 TFNVLVDTFCKEGKVLAAEGVLKTMTE---MGVEPDVVTYNSLMYGYSMWTEVVEARKLF 243
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M +G PD+ +Y+I++ + ++D+ +L +EM G +P+ +YN L+H L +
Sbjct: 244 DVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQL 303
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A +L +M G P++ + L+DG + G L F M + P++V Y
Sbjct: 304 GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 363
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++ + +G L+ A++LF + G PNV Y ++I G C G DEA + ME
Sbjct: 364 NILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMED 423
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ YN ++ + A +I M ++G
Sbjct: 424 DGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 460
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T NILI C V L V+ + IK +P ++ +++ L + ++
Sbjct: 5 GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIK---LGLQPTIVTFTTLINGLGKVGKF 61
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ M G PD TY ++ ++G+ L +M +G + TY+ L
Sbjct: 62 AQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTL 121
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L K + AL++ ++MK P++ +T+L+ GL +EM +
Sbjct: 122 IHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNI 181
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MP+VV + V++ ++ G++ A+ + M G P+V TYNS++ G+ M + EA
Sbjct: 182 MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARK 241
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M ++GC P+ Y+ L++ A ++ EA ++ M+ +G + VS
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVS 292
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 116/247 (46%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
N P ++N ++ + E V + M++ G PD++TYN +M ++ +
Sbjct: 179 LNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVE 238
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+L D M G PD +Y+IL++ K + A L N M G P+ + + TL+
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIH 298
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL + G L + F M G +P++ Y +++ + G L KA LF M + P
Sbjct: 299 GLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N+ YN ++ C +G +A + E+ G PN +Y T+++ L G L EA E
Sbjct: 359 NLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAF 418
Query: 279 RHMVEKG 285
R+M + G
Sbjct: 419 RNMEDDG 425
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G +++ILI C + A+++ I P SYN ++H L
Sbjct: 246 MITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQ---GSTPNNVSYNTLIHGLCQ 302
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +++ M G P++ TY I++ + G L + RL M + P+
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL++ + K A L + + +G P+V +TT+++GL + G LD F M
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 422
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ GC PD Y V+I ++ + +A L M +G + + T
Sbjct: 423 DDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 145/291 (49%), Gaps = 7/291 (2%)
Query: 1 MIENGFPTTARTFNILICTCGE------VGLARKVVERFIKS-KLFNFRPFKNSYNAILH 53
M+ G + + N+ I E + L + V + I+ ++ +P +YN ++
Sbjct: 172 MLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVIL 231
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L + E V ++M EG APD + Y ++ +LG + +RL DEM + SP
Sbjct: 232 LLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISP 291
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
DF TY ++ L + + + A L + M +P + +T L+DG + G +
Sbjct: 292 DFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLH 351
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M G P++V YT + GE++ A +L M KG N++TYNS++ G C A
Sbjct: 352 NQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKA 411
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G D+A +MK+ME G +P+ + Y TL+ + ++ AHE++R M+++
Sbjct: 412 GNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDR 462
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A K+ + +L P + +Y A++ + K ++ QM G
Sbjct: 303 LCQTGRVMEADKLFHEMVCKRL---EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 359
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+I+TY + + G++D + LL EM R G + +TYN L++ L K A+
Sbjct: 360 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 419
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M+ GF P + +TTLMD ++ + +M ++ P VV + V++ +
Sbjct: 420 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 479
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G LE + L M+ KG +PN TYNS+I+ +C+ + + M ++G P+
Sbjct: 480 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGN 539
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ A + EA + R MV KG
Sbjct: 540 TYNILIKGHCKARNMKEAWFLHRDMVGKG 568
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 38/314 (12%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P T +L+C G+V A +V+ I + P Y ++ +
Sbjct: 223 PYTYNGVILLLCKTGKVAEAERVLREMISEGI---APDGVIYTTLIDGFCKLGNVSSAYR 279
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +PD +TY V+C + G++ + +L EM PD TY L+
Sbjct: 280 LFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYC 339
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC----- 181
K K A +L N M ++G P+++ +T L DGL + G +D EM KG
Sbjct: 340 KEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIY 399
Query: 182 ------------------------------MPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
PD V YT ++ +Y + E+ +A +L M
Sbjct: 400 TYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQM 459
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ + P V T+N ++ GFCM+G ++ ++K M +G PN YN+L+ +
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519
Query: 272 AEAHEVIRHMVEKG 285
E+ R M KG
Sbjct: 520 RATTEIYRGMCAKG 533
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 65 EWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
EWV ++M +G P+ TYN V+ + GK+ + R+L EM G +PD Y L
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K +A L + M++ P + +T ++ GL + G + F EM K
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRL 324
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD V YT +I Y G++++A L + M+ G PN+ TY ++ G C G+ D A
Sbjct: 325 EPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANE 384
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM +G N YN+LV+ L AG + +A ++++ M G
Sbjct: 385 LLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAG 428
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 110/239 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y A+ L + + +M +G +I TYN ++ + G +DQ +L+ +M
Sbjct: 365 TYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM 424
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+GF PD TY L+ K + + A LL M + P+V+ F LM+G +G L
Sbjct: 425 EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGML 484
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + M KG MP+ Y +I Y + +++ GM KG +P+ TYN +
Sbjct: 485 EDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 544
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I+G C A EA + ++M +G N YN L+ K EA E+ M +G
Sbjct: 545 IKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
L L+ M+ G P+ + ++ L + G + + EM ++G PD V YT +I
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G + A LFD M + P+ TY ++I G C G+ EA + EM + P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + Y L+ GK+ EA + M++ G ++V+
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVT 365
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 20/231 (8%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--LLGIR 59
GF A T+ L+ C E+ A +++ + + +L +P ++N +++ + G+
Sbjct: 428 GFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL---QPTVVTFNVLMNGFCMSGML 484
Query: 60 Q--YKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ KL++W M ++G P+ TYN ++ C + + + +R M G PD
Sbjct: 485 EDGEKLLKW----MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYR---GMCAKGVVPD 537
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TYNIL+ K A L M GF+ +V + L+ G + + F+
Sbjct: 538 GNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFE 597
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+M +G + D Y + G++E +L D I K + ++ T N+
Sbjct: 598 QMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 144/290 (49%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G +A +N LI C G + +A + +K + P ++YN+++HAL
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI---SPTMSTYNSLIHALFM 373
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E + +++ ++G +PD +TYNI++ R + L DEM SG P T
Sbjct: 374 EQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKT 433
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LLHVL K ++ A +L + G P V+ F L+DG N+ +M
Sbjct: 434 YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMD 493
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD V + ++ + G++E+A++LFD M +G P+ ++N++I G+ G
Sbjct: 494 RMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIK 553
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEKG 285
+A + EM G NP L YN LV L G LAE E+++ MV KG
Sbjct: 554 DAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE--ELLKEMVSKG 601
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 10/304 (3%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF ++ F+ LI +C ++ A + E F K P + N++L L + + +
Sbjct: 147 GFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y +M + T+NI++ + GKL + + M SG P+ TYN ++H
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ AA +L MK +P + +L+ G+ + G L+ F+EM KG P
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y +I + G L+ A D M+ KG P + TYNS+I M + DEA M+K
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG---------KYIHLVSKFK 295
E++ +G +P+ + YN L++ +A + M+ G +H++SK
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445
Query: 296 RYKR 299
R K
Sbjct: 446 RMKE 449
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 129/269 (47%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + A K+ E ++ L RP YN ++ + +M +G
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGL---RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P + TYN ++ A + + D+ ++ E+ G SPD TYNIL++ + A
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P+ +T+L+ LS+ + F ++ ++G +PDV+ + +I +
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHC 477
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+ ++ A +L M P+ T+N++++G C GK +EA + EM+ RG P+ +
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+NTL+S G + +A V M++ G
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 130/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+N ++ C+ G V A ++ + K+ P +Y +++ +
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI---EPDSFTYGSLISGMCK 303
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++++M +G P + YN ++ G LD DEM + G SP T
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L + A ++ ++E G P + + L++G R N DEM
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P YT ++ +++A DLF + ++G LP+V +N++I G C
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVK 483
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++K+M+ P+ + +NT++ GK+ EA E+ M +G
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNS---YNAILHALLG 57
M E G T T N L+ + L R + +++F R K+S +N +++ L
Sbjct: 177 MKEKGVLPTIETCNSLLSLF--LKLNRTEAAWVLYAEMFRLR-IKSSVYTFNIMINVLCK 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + M G P+I+TYN ++ G+++ +L M R PD T
Sbjct: 234 EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + K + A + M + G PS + + TL+DG GNLD + DEM
Sbjct: 294 YGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEML 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P + Y +I + ++A+ + + KG P+ TYN +I G+C
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + EM + G P Y +L+ L ++ EA ++ + + +G
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 6/239 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E G A T+NILI C C A + + + S + +P K +Y ++LH L
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI---KPTKKTYTSLLHVLSKKN 445
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ K + ++++++ EG PD++ +N ++ + LL +M R PD T+N
Sbjct: 446 RMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFN 505
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ + K A L + MK G P + F TL+ G SR G++ +EM +
Sbjct: 506 TIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDT 565
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G P V+ Y ++ E + A++L M++KG P+ TY ++I G DE
Sbjct: 566 GFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 138/250 (55%), Gaps = 6/250 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +S+N +L A+ I++Y + +Y++MS G APD +T NI++ L K+D +
Sbjct: 90 PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM R G SP+ T+ L+ L G + A LL M +G+ P+V+ + TL++GL
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCM 209
Query: 163 AGNLDACKYFFDEMANKG------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
GN +EM N P++VCY +I S G ++K ++LF M +G
Sbjct: 210 TGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGI 269
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+V Y+S+I G C G+++ A + EM G +PN + +N L+ L AGK+ EA+
Sbjct: 270 SPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANH 329
Query: 277 VIRHMVEKGK 286
+++ M+++G+
Sbjct: 330 LLKLMIQRGE 339
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 148/297 (49%), Gaps = 19/297 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N LI C G + AR + F+ + SYN +++
Sbjct: 334 MIQRGESPDTFTYNTLIDGFCLEGRIDDARDL---FVSMESKGIETDAVSYNVLINGYCK 390
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y++M + P ++TYN ++ +R GK+ L EM +P+ T
Sbjct: 391 SGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCT 450
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNILL L K + A+ L ++++ F PS+ F L+DGL +A ++ + F+ ++
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLS 510
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P+V+ YTVMI +G+LE A+DLF GM KG PN+ T+N+++RGFC +
Sbjct: 511 HEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQ 570
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+ +++EM + +P+ + +V L K E Y+HL+ F
Sbjct: 571 KVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYRE-------------YLHLLPTF 614
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 139/282 (49%), Gaps = 12/282 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T NILI C +V V+ ++ P ++ +++ L + +
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRR---GHSPNTVTFTSLVKGLCLGSRISEATGLL 185
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFS----PDFHTYNILL 122
++M GY P+++TY ++ G +L +EM G GF P+ Y ++
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K L MK G P V+ +++++ G+ G + K F+EM ++G
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+VV + V+I + AG++E+A L MI +G+ P+ FTYN++I GFC+ G+ D+A +
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
MES+G + + YN L++ +G++ EA ++ R M+ K
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCK 407
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL---FNFRPFKNSYNAILHA 54
M+ G+ T+ L+ C G LA K+ E + +P Y I+ +
Sbjct: 188 MVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDS 247
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L + ++ +M G +PD++ Y+ ++ G+ + L +EM G P+
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPN 307
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+N+L+ L K K A +LL M + G P + TL+DG G +D + F
Sbjct: 308 VVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFV 367
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M +KG D V Y V+I Y +G + +A+ L+ M+ K +P V TYN+++ G G
Sbjct: 368 SMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREG 427
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
K +A + EM+ P YN L+ L L+EA E+ ++
Sbjct: 428 KVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYL 474
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 145/369 (39%), Gaps = 85/369 (23%)
Query: 16 LICTCGEV------GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
L+C C + GL K E F++ K P +Y++I+H + +++ + ++
Sbjct: 238 LVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFN 297
Query: 70 QMSDEGY-----------------------------------APDILTYNIVM---CAKY 91
+M DEG +PD TYN ++ C +
Sbjct: 298 EMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEG 357
Query: 92 RL--------------------------------GKLDQFHRLLDEMGRSGFSPDFHTYN 119
R+ G++ + +L EM P TYN
Sbjct: 358 RIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYN 417
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL L + K A NL MK P + L+DGL + +L F + N
Sbjct: 418 TLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENH 477
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P + + +I A ++E A++LF+ + +G PNV TY MI G C +G+ + A
Sbjct: 478 DFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK---------GKYIHL 290
+ ME +GC PN + +NTL+ ++ + E+++ M EK + L
Sbjct: 538 KDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDL 597
Query: 291 VSKFKRYKR 299
+SK ++Y+
Sbjct: 598 LSKDEKYRE 606
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 10/255 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T A ++N+LI C G + A+K+ + ++ P +YN +L L
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIM---PTVITYNTLLTGLF- 424
Query: 58 IRQYKLIE-W-VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R+ K+ + W ++ +M P+ TYNI++ + L + L + F P
Sbjct: 425 -REGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+N L+ L K K A L N + G +P+V+ +T ++ GL ++G L+ K F
Sbjct: 484 QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLG 543
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M KGC P++V + ++ + E++K +L M K P+ T + ++ K
Sbjct: 544 MEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603
Query: 236 FDEACTMMKEMESRG 250
+ E ++ ++G
Sbjct: 604 YREYLHLLPTFPAQG 618
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 6/180 (3%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+P ++N LL + K + ++L M +G P + L++ +D
Sbjct: 89 TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA 148
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
EM +G P+ V +T ++ + +A L M+ G PNV TY +++ G C
Sbjct: 149 VLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLC 208
Query: 232 MAGKFDEACTMMKEMESRG------CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M G A + +EM + PN + Y T++ +L G + + E+ M +G
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRG 268
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 149/325 (45%), Gaps = 40/325 (12%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-----GIRQYK 62
+++ F++++ + +G K + + F P SYNA+L ALL R Y
Sbjct: 130 SSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYD 189
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E V++ M G +P++ TYN+++ G L++ + +M + G SP+ TYN L+
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249
Query: 123 HVLGKGDKPLAALNLL-------------------------NHMKEV----------GFD 147
K K A+ LL M EV G
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLV 309
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + + TL++G + GNL EM KG P+VV YT +I AG L +A ++
Sbjct: 310 PDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEI 369
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
FD M +G PN TY ++I GFC G +EA ++ EM G +P+ + YN LV
Sbjct: 370 FDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCF 429
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ EA ++R MVE+G +VS
Sbjct: 430 LGRVQEAVGILRGMVERGLPPDVVS 454
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG T+N++I G K + K + P +YN ++ A ++
Sbjct: 198 MVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKK 257
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + M+ G A ++++YN V+ G++ + L++EM G PD TYN
Sbjct: 258 VKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K L LL+ M G P+V+ +TTL++ + +AGNL FD+M +G
Sbjct: 318 LVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG 377
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ YT +I + G + +A + MI G P+V TYN+++ G+C G+ EA
Sbjct: 378 LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAV 437
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M RG P+ + Y+T+++ +L +A ++ MVEKG
Sbjct: 438 GILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 126/239 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN++++ L G + + + ++M +G PD +TYN ++ + G L Q LL EM
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SP+ TY L++ + K A+ + + M+ G P+ +TTL+DG + G +
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ EM G P VV Y ++ Y G +++A + GM+ +G P+V +Y+++
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GFC + +A M +EM +G P+ + Y++L+ L KL EA ++ R M+ +G
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 135/306 (44%), Gaps = 21/306 (6%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G RT+ LI C G + A KV+ I S F P +YNA++H + +
Sbjct: 377 GLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS---GFSPSVVTYNALVHGYCFLGRV 433
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + + M + G PD+++Y+ V+ R +L + ++ +EM G PD TY+ L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A +L M G P + +T+L++ G L DEM +G
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGF 553
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI-------------- 227
+PD V Y+V+I + A+ L + + +P+ TYN++I
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613
Query: 228 -RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+GFCM G +EA + K M R PN +YN ++ G + +A+ + +
Sbjct: 614 VKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSF 673
Query: 287 YIHLVS 292
H V+
Sbjct: 674 ACHTVA 679
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 73/158 (46%), Gaps = 6/158 (3%)
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
H+ F S + F ++ LSR G + G P V+ Y ++ + +
Sbjct: 123 HLCSSPFSSSAV-FDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRS 181
Query: 200 -----ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ + A+ +F M+ G PNV+TYN +IRG G ++ M++ME G +PN
Sbjct: 182 SSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPN 241
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ YNTL+ K+ EA ++R M G +L+S
Sbjct: 242 VVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLIS 279
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 93/237 (39%), Gaps = 21/237 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P T+ LI C GE+ A ++ + ++ F P +Y+ +++ L
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQR---GFLPDNVTYSVLINGLNK 569
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--CAKYRL-------------GKLDQFHRL 102
+ K+ + + ++ E PD +TYN ++ C+ G +++ R+
Sbjct: 570 KARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRV 629
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
M + P+ YN+++H +G A NL ++ F + L+ L+R
Sbjct: 630 FKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAR 689
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
G D + + D V++ G ++ ++ M G LP+
Sbjct: 690 EGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746
>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g31400, chloroplastic; Flags: Precursor
gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
Length = 918
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 132/282 (46%), Gaps = 1/282 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKL 63
G+ T F+ LI G GL + + F K + RP +YNA++ A G ++K
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + +M G PD +T+N ++ R G + L DEM D +YN LL
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ KG + A +L M P+V+ ++T++DG ++AG D F EM G
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D V Y +++ Y G E+A D+ M + G +V TYN+++ G+ GK+DE +
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ PN L Y+TL+ G EA E+ R G
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG 544
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 14/269 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---AR----KVVERFIKSKLFNFRPFKNSYNAILH 53
M NG TFN L+ C GL AR ++ R I+ +F SYN +L
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF-------SYNTLLD 382
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A+ Q L + QM + P++++Y+ V+ + G+ D+ L EM G +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 442
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YN LL + K + AL++L M VG V+ + L+ G + G D K F
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM + +P+++ Y+ +I Y G ++A ++F + G +V Y+++I C
Sbjct: 503 TEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G A +++ EM G +PN + YN+++
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSII 591
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 95/202 (47%), Gaps = 1/202 (0%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
R GK+ R+ + G+ + ++ L+ G+ A+++ N MKE G P+++
Sbjct: 245 RYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLV 304
Query: 152 HFTTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ ++D + G FFDEM G PD + + ++ G E A++LFD
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M + +VF+YN+++ C G+ D A ++ +M + PN + Y+T++ AG+
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
EA + M G + VS
Sbjct: 425 FDEALNLFGEMRYLGIALDRVS 446
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 4/172 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +L + + + + ++M+ G D++TYN ++ + GK D+ ++ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R P+ TY+ L+ KG A+ + K G V+ ++ L+D L + G +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+ DEM +G P+VV Y +I ++ + ++++ D +G G LP
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG----GSLP 613
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 1/173 (0%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ LG+ K A + G+ +V F+ L+ R+G + F+ M G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 181 CMPDVVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P++V Y +I + G E ++ FD M G P+ T+NS++ G ++ A
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAA 358
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM +R + YNTL+ + G++ A E++ M K ++VS
Sbjct: 359 RNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVS 411
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N L+ G+ G +V + F + K + P +Y+ ++
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YK ++++ G D++ Y+ ++ A + G + L+DEM + G SP+ TYN
Sbjct: 530 YKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 121 LLHVLGK 127
++ G+
Sbjct: 590 IIDAFGR 596
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 167 DACKYFFDEMANKGCMPDVVCY------------------TVMITSYIAAGELEKAQDLF 208
D C Y E+ N+ V + + MI++ G++ A+ +F
Sbjct: 197 DDCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF 256
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ G V+ ++++I + +G +EA ++ M+ G PN + YN ++
Sbjct: 257 ETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 143/287 (49%), Gaps = 2/287 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LI VG + E + + + P + +Y+ ++H R + + + QQM
Sbjct: 528 YNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQML 587
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ G P+ TY ++ ++ ++ +L M SG PD H Y I++ L + +
Sbjct: 588 NSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENME 647
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A +L +++ G P + +++L+ GL + +++ DEMA +G P +VCY +I
Sbjct: 648 VAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALI 707
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ +G++ +A+++FD ++ KG LPN TY ++I G C G +A + K+M RG
Sbjct: 708 DGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIA 767
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
P+ VYN L + +A L +A + M +G Y H VS F R
Sbjct: 768 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAH-VSLFSTLVR 812
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 37/301 (12%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C + A +++++ + S L +P ++Y +L ++ + + Q M G
Sbjct: 571 CKTRNLEKADQLLQQMLNSGL---KPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDK 627
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD Y IV+ R ++ +L E+ ++G PD H Y+ L+ L K A+ L
Sbjct: 628 PDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGL 687
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M + G +P ++ + L+DG R+G++ + FD + KG +P+ V YT +I
Sbjct: 688 LDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCK 747
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYN--------------------------------- 224
G++ A DL+ M+ +G P+ F YN
Sbjct: 748 NGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYAHVSLF 807
Query: 225 -SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++RGFC G+ E ++ M R PN +++ AGKL EAH V + +
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867
Query: 284 K 284
K
Sbjct: 868 K 868
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 126/282 (44%), Gaps = 6/282 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T++ + C + A+KV E + + + +YN ++ L
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRR---DCAMNEVTYNVMISGLCRSGAV 296
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++M D G +PD TY +M + G+L + LLDEM SG P+ Y L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K K A ++LN M G P+ + + L+ GL + G L +EM G
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD Y ++ + + + A +L + M G LPN +TY MI G C G+ EA
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++EM S G PN +Y L+ G ++ A E + +M +
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTK 518
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V A E + + P +Y A+++ L + K + +
Sbjct: 282 TYNVMISGLCRSGAVEEAFGFKEEMVD---YGLSPDAFTYGALMNGLCKGGRLKEAKALL 338
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+MS G P+++ Y ++ + GK + +L+EM +G P+ Y+ L+ L K
Sbjct: 339 DEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKI 398
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LLN M +VG P + LM G + + D +EM N G +P+ Y
Sbjct: 399 GQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTY 458
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+MI GE ++A +L + MI++G PN F Y +I G G AC ++ M
Sbjct: 459 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTK 518
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ YN+L+ L G++ EA E + ++G
Sbjct: 519 ANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRG 555
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++L+ T + G R + + P + N +L LL +L+ + M
Sbjct: 177 VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFM 236
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PD+ TY+ + A + D ++ +EM R + + TYN+++ L +
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A M + G P + LM+GL + G L K DEM+ G P+VV Y +
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ ++ G+ +A D+ + MI+ G PN Y+++IRG C G+ A ++ EM G
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416
Query: 252 NPNFLVYNTLV 262
P+ Y+ L+
Sbjct: 417 RPDTFTYHPLM 427
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y+ L A R + + V+++M A + +TYN+++ R G +++
Sbjct: 243 PDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGF 302
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+EM G SPD TY L++ L KG + A LL+ M G P+V+ + TL+DG +
Sbjct: 303 KEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMK 362
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G +EM + G P+ + Y +I G+L +A L + MI G P+ FT
Sbjct: 363 EGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFT 422
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+ +++G D A ++ EM + G PN Y +++ L G+ EA ++ M+
Sbjct: 423 YHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMI 482
Query: 283 EKG 285
+G
Sbjct: 483 SEG 485
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G A + LI G + LA + +E K+ N P YN+++ L
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKA---NVLPDLFCYNSLIKGLST 537
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + E Y Q+ G PD TY+ ++ + L++ +LL +M SG P+ T
Sbjct: 538 VGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADT 597
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LL K + ++L M G P + ++ LSR+ N++ E+
Sbjct: 598 YTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 657
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +PD+ Y+ +I+ ++EKA L D M +G P + YN++I GFC +G
Sbjct: 658 KNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 717
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + + ++G PN + Y L+ G + +A ++ + M+++G
Sbjct: 718 RARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRG 765
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P K Y+ ++ L I Q + +M G+ PD TY+ +M ++ D
Sbjct: 382 QPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFE 441
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL+EM SG P+ +TY I+++ L + + A NLL M G P+ + L+ G S
Sbjct: 442 LLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHS 501
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G++ + M +PD+ CY +I G +E+A++ + + +G +P+ F
Sbjct: 502 KEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEF 561
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+ +I G+C ++A ++++M + G PN Y L+ + + +++ M
Sbjct: 562 TYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621
Query: 282 VEKG 285
+ G
Sbjct: 622 LGSG 625
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 126/288 (43%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++ LI C G++G A K++ IK RP +Y+ ++
Sbjct: 376 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIK---VGHRPDTFTYHPLMQGHFQ 432
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M + G P+ TY I++ + G+ + LL+EM G P+
Sbjct: 433 HYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFM 492
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A L +M + P + + +L+ GLS G ++ + ++ ++
Sbjct: 493 YAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQ 552
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +PD Y+ +I Y LEKA L M+ G PN TY ++ G+ + +
Sbjct: 553 KRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHE 612
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++++ M G P+ +Y ++ NL + + A V+ + + G
Sbjct: 613 KVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 660
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 147/296 (49%), Gaps = 7/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ +I C + A V+ + I + F+P K +YN ++H
Sbjct: 253 MMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISN---GFQPNKVTYNCMIHGYSI 309
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+K ++++M+ +G P+I+T N M + + GK + D M G P+ T
Sbjct: 310 SGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVT 369
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++LLH + LNL N M+ G F ++D + G +D F +M
Sbjct: 370 YSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQ 429
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +PD Y ++I ++ G L A D F+ MI G P Y+S+I+GFCM G
Sbjct: 430 EQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLV 489
Query: 238 EACTMMKEMESRGC-NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A ++ EM SRG PN + +N+++++L G++ EAH++ ++ G+ +++
Sbjct: 490 KAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVIT 545
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 3/253 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF-HR 101
P +YN ++ R+ + ++ + G D++ +I++ Y + D +
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM--KEVGFDPSVLHFTTLMDG 159
LL M G PD +YN ++ L + + AL+LL+ M K G P+V+ + T++ G
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G + F EM +G +PDVV YT +I + A ++KA+ + MI+ G PN
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYN MI G+ ++G++ E M +EM S+G PN + N+ +S+L GK EA E
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356
Query: 280 HMVEKGKYIHLVS 292
M KG +LV+
Sbjct: 357 SMAAKGHKPNLVT 369
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 1/225 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ QM ++G PD TY IV+ A R+G+L ++M G P+ Y+ L+
Sbjct: 424 IFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFC 483
Query: 127 KGDKPLAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ A L++ M G P+++ F ++++ L + G + FD + + G PDV
Sbjct: 484 MHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDV 543
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ + +I Y G++EKA + D MI+ G P+V +YN++I G+C G+ D+ + E
Sbjct: 544 ITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGE 603
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
M S+G P + Y ++ L N G+ A ++ M+E G + +
Sbjct: 604 MLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 8/269 (2%)
Query: 39 FNFRPFKNSYNAILHALL-GIRQYKLIEWVYQQMSDEG-YAPDILTYNIVMCAKYRLGKL 96
P SYN ++ L R + ++ ++ + G +P+++TYN V+ +R G++
Sbjct: 184 LGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEV 243
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+ L EM + G PD TY ++ L K A +L M GF P+ + + +
Sbjct: 244 SKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCM 303
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ G S +G F EM ++G MP++V ++S G+ ++A + FD M KG
Sbjct: 304 IHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGH 363
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
PN+ TY+ ++ G+ G F + + ME G + V+N ++ G + E
Sbjct: 364 KPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETML 423
Query: 277 VIRHMVEKG------KYIHLVSKFKRYKR 299
+ M E+G Y +++ F R R
Sbjct: 424 IFTQMQEQGVIPDACTYGIVIAAFSRMGR 452
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
M E G A T+ I+I +G +++F + +P Y++++ +
Sbjct: 428 MQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGN 487
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
K E V + MS P+I+ +N ++ + + G++ + H + D + G PD T+N
Sbjct: 488 LVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFN 547
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ G K A +L+ M G +P V+ + TL+DG R G +D F EM +K
Sbjct: 548 SLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSK 607
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P + Y +++ G A+ + MI G ++ T ++ G C DEA
Sbjct: 608 GVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEA 667
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M K++ + N + NT++ + K EA E+ + G
Sbjct: 668 IAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATG 713
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 121/282 (42%), Gaps = 15/282 (5%)
Query: 1 MIENGFPTTARTF--NILICTCGEVGLARKVVERFIKSKLFNF------RPFKNSYNAIL 52
M+ G P F +I+ C E +VVE +F+F RP ++N+++
Sbjct: 498 MMSRGIPRPNIVFFNSIINSLCKE----GRVVE---AHDIFDFVIHIGERPDVITFNSLI 550
Query: 53 HALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
+ + + V M G PD+++YN ++ R G++D L EM G
Sbjct: 551 DGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVK 610
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P TY I+LH L + + A + + M E G + ++ GL R D
Sbjct: 611 PTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAM 670
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F ++ ++ MI + + E+A++LFD + G +PN TY MI+
Sbjct: 671 FKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLK 730
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +EA M ME GC P+ + N ++ L G++ +A
Sbjct: 731 EGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 115/265 (43%), Gaps = 6/265 (2%)
Query: 12 TFNILICTCGEVGLARK---VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI G VG K V++ I + + P SYN ++ + ++
Sbjct: 545 TFNSLIDGYGLVGKIEKAFGVLDAMISAGI---EPDVVSYNTLIDGYCRNGRIDDGLILF 601
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G P +TY I++ + G+ ++ EM SG + D T I+L L +
Sbjct: 602 GEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRN 661
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ + + + ++ T++D + + + K FD ++ G +P+ Y
Sbjct: 662 NCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTY 721
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
VMI + + G +E+A ++F M G P+ N +IR G+ +A M +++
Sbjct: 722 GVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDG 781
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAE 273
+ + + L++ GK E
Sbjct: 782 KRISLEASTVSLLMALFSREGKYWE 806
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 140/295 (47%), Gaps = 6/295 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++ GF F LI C G+ LA +++ L P + N+++
Sbjct: 102 LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM---GLVGCVPDVVTCNSLMRGYCSQ 158
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + ++ M +G PD+ +Y+I + ++ K+D+ L DEM G P+ TY
Sbjct: 159 GKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTY 218
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L + +P A L M G P +L ++TL+DG + GNLD F EM
Sbjct: 219 NTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQR 278
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ PD+V YT++I + +++ A+++ +I +G P+V TY +++ G C G E
Sbjct: 279 RLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIE 338
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
A + ++ME GC P YN L+ + ++I M ++G Y V++
Sbjct: 339 ALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTR 393
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 129/256 (50%), Gaps = 4/256 (1%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N +P +N +L +++ +++Y+ + ++++M G ++ T +I++ L +D
Sbjct: 35 NPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYG 94
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+ + + GF PD + L+ + + K A LL M VG P V+ +LM G
Sbjct: 95 FSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRG 154
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
G +D + F M +KG PDV Y++ I Y ++++A +LFD M +G +PN
Sbjct: 155 YCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPN 214
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA----H 275
TYN++I+ C A + +A + ++M + G +P+ L Y+TL+ G L E
Sbjct: 215 AVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQ 274
Query: 276 EVIRHMVEKGKYIHLV 291
E+ R +V+ ++ +
Sbjct: 275 EMQRRLVKPDLVVYTI 290
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 96/215 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G +++I I +V + +E F + P +YN ++ AL +
Sbjct: 171 MVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALR 230
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++++M G +PDIL Y+ ++ + G LD+ L EM R PD Y I
Sbjct: 231 PRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTI 290
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ + + K A +L+ + G P V +T L+DGL R G++ F +M G
Sbjct: 291 IINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDG 350
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
CMP Y V++ + + L M +G
Sbjct: 351 CMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG 385
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L F+R+LD + P +N LL + + K ++L M+ G +V +
Sbjct: 25 LASFNRMLDRNPQ----PPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSI 80
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ ++D F + +G PDVV +T +I G+ E A L M G
Sbjct: 81 LINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVG 140
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+P+V T NS++RG+C GK D+ + M S+G P+ Y+ ++ K+ EA
Sbjct: 141 CVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAM 200
Query: 276 EVIRHMVEKG 285
E+ M +G
Sbjct: 201 ELFDEMSHRG 210
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL N M + P ++ F L+ + R + F EM +G +V +++I
Sbjct: 24 ALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILIN 83
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ ++ +F + +G P+V + ++I G C GK + A ++KEM GC P
Sbjct: 84 CFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVP 143
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + N+L+ + GK+ + ++ MV KG
Sbjct: 144 DVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKG 175
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 73/191 (38%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G A T+N LI + R F K P +Y+ +L
Sbjct: 206 MSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGN 265
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++Q+M PD++ Y I++ R K+ +L + G PD HTY
Sbjct: 266 LDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTA 325
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + AL L M+E G P + L+ G + + EMA++G
Sbjct: 326 LVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRG 385
Query: 181 CMPDVVCYTVM 191
D V T +
Sbjct: 386 FYADAVTRTFL 396
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
GNLD F+ M ++ P ++ + +++S + + E LF M +G NV T
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ +I FC D ++ + RG P+ +++ TL+ + GK A +++ M
Sbjct: 79 SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P Y I++ + R+ K + V ++ EG PD+ TY ++ R G + + R
Sbjct: 282 KPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALR 341
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +M G P +YN+LL + + + L++ M + GF + T L D L
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDFL 400
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G A T+N LI C G++ A +++ + I + L +YN +H
Sbjct: 312 MLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLV-------TYNLFIH 364
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL + + + ++M ++G PD +T+NI++ R G + LLDEM G P
Sbjct: 365 ALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQP 424
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TY L++VLGK ++ A L + +++ G P ++ F L+DG GN+D
Sbjct: 425 TLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLL 484
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM N +PD + Y ++ Y G++E+A+ L D M +G P+ +YN++I G+
Sbjct: 485 KEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKR 544
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G +A + EM + G +P L YN L+ L + A E+++ MV KG
Sbjct: 545 GDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKG 596
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 135/309 (43%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFNI+I + G +K E + +P +YN I+H +++ ++Q M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277
Query: 72 SDEGYAPDILTYNIV---MCAKYRL--------------------------------GKL 96
D+G PD TYN +C + RL G L
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D+ + DEM G TYN+ +H L + A N++ M+E G P + L
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
++G R G+ DEM KG P +V YT +I +++A LF + +G
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
LP++ +N++I G C G D A ++KEM++ P+ + YNTL+ GK+ EA +
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517
Query: 277 VIRHMVEKG 285
++ M +G
Sbjct: 518 LLDEMKRRG 526
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ ++G+ P+I T N ++ +L + L EM R +T+NI+++VL K K
Sbjct: 172 IKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGK 231
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A + HM+ +G P+V+ + T++ G G + F M +KG PD Y
Sbjct: 232 LKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNS 291
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
I+ G LE+A L M+ G +PN TYN++I G+C G D+A EM S+G
Sbjct: 292 FISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKG 351
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YN + L G++ +A +I+ M EKG
Sbjct: 352 IMASLVTYNLFIHALFMEGRMGDADNMIKEMREKG 386
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 130/285 (45%), Gaps = 4/285 (1%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF--NFRPFKNSYNAILHALLGIRQ 60
E GF T N ++ + L R + + +++F N R ++N +++ L +
Sbjct: 174 EKGFVPNIETCNQMLSLF--LKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGK 231
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + M G P+++TYN ++ GK + + M G PD +TYN
Sbjct: 232 LKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNS 291
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L K + A L+ M E G P+ + + L+DG G+LD + DEM +KG
Sbjct: 292 FISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKG 351
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
M +V Y + I + G + A ++ M KG +P+ T+N +I G+C G A
Sbjct: 352 IMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAF 411
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM +G P + Y +L+ L ++ EA + + ++G
Sbjct: 412 GLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 130/284 (45%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T F++L+ E+ + +E F K F P + N +L L + + ++ +Y
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLY 204
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M + T+NI++ + GKL + + M G P+ TYN ++H
Sbjct: 205 AEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLR 264
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A + MK+ G +P + + + GL + G L+ +M G +P+ V Y
Sbjct: 265 GKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTY 324
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I Y G+L+KA D MI+KG + ++ TYN I M G+ +A M+KEM
Sbjct: 325 NALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G P+ + +N L++ G A ++ MV KG LV+
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVT 428
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 6/233 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G A T NILI C CG+ A +++ + + +P +Y ++++ L
Sbjct: 382 MREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGI---QPTLVTYTSLIYVLGK 438
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + ++ ++ EG PDI+ +N ++ G +D+ +LL EM PD T
Sbjct: 439 RNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEIT 498
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + K A LL+ MK G P + + TL+ G S+ G++ DEM
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMM 558
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
G P ++ Y +I E E A++L M++KG P+ TY S+I
Sbjct: 559 TTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 103/220 (46%)
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D A L +++++ A L K ++ + GF P+ T N +L + K ++
Sbjct: 139 DRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQ 198
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A L M + S+ F +++ L + G L K F M G P+VV Y +I
Sbjct: 199 MAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTII 258
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G+ ++A+ +F M KG P+ +TYNS I G C G+ +EA ++ +M G
Sbjct: 259 HGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV 318
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN + YN L+ N G L +A+ M+ KG LV+
Sbjct: 319 PNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVT 358
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 142/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI + G + V K + + +P Y I+H L +
Sbjct: 157 VVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKL 216
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y +M +G +P++ TY ++ +G L + LL+EM +PD +T+NI
Sbjct: 217 LGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNI 276
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A++L MK P+++ +T+L+DGL + +L+ +M +G
Sbjct: 277 LIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 336
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V YT+++ + G LE A+ F ++ KG NV TYN MI G C AG F +
Sbjct: 337 IQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVM 396
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +ME +GC PN + + T++ L + +A + +R M+ +G
Sbjct: 397 DLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARG 441
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N IL +L+ ++Y + +++Q G PD+ T +I++ L + + +
Sbjct: 64 FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANIL 123
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ G+ P+ T N L+ L + AL+ + + GF + + TL++GL +AG
Sbjct: 124 KRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 183
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A ++ PD+V YT +I L A DL+ MI KG PNVFTY ++I
Sbjct: 184 AVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLI 243
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
GFC+ G EA +++ EM+ + NP+ +N L+ L GK+ EA + M K +
Sbjct: 244 HGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMF 303
Query: 288 IHLVS 292
++V+
Sbjct: 304 PNIVT 308
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 6/290 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T +ILI C + A V +K + P + N ++ L +
Sbjct: 90 NGITPDLCTLSILINCFCHLTHITFAFSVFANILKR---GYHPNAITLNTLIKGLCFCGE 146
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + ++ +G+ D ++Y ++ + G+ RLL ++ PD Y
Sbjct: 147 IKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTT 206
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H L K A +L + M G P+V +TTL+ G GNL +EM K
Sbjct: 207 IIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKN 266
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV + ++I + G++++A LF+ M K PN+ TY S+I G C + A
Sbjct: 267 INPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAI 326
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ K+M+ +G PN Y L+ L G+L A + +H++ KG ++++
Sbjct: 327 ALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNV 376
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 35/206 (16%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++H + K + +M + PD+ T+NI++ A + GK+D+ L +EM
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
P+ TY L+ L K A+ L MKE G P+V +T L+D L + G L
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357
Query: 167 DACKYFF-----------------------------------DEMANKGCMPDVVCYTVM 191
+ K FF +M KGCMP+ + + +
Sbjct: 358 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTI 417
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQL 217
I + + E +KA+ MI +G L
Sbjct: 418 ICALLEKDENDKAEKFLREMIARGLL 443
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 76/173 (43%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P +N +L L K + ++L + G P + + L++ ++
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F + +G P+ + +I GE+++A D ++ +G + +Y ++I G C
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG+ +++++E P+ ++Y T++ L L +A ++ M+ KG
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKG 231
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 63/148 (42%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ N M + P F ++ L + F + G PD+ +++I
Sbjct: 45 AVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILIN 104
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ + A +F ++ +G PN T N++I+G C G+ A ++ ++G
Sbjct: 105 CFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQL 164
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + Y TL++ L AG+ ++R +
Sbjct: 165 DQVSYGTLINGLCKAGETKAVARLLRKL 192
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 143/289 (49%), Gaps = 6/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GF TFN LI C G + A ++++ + L + + N ILH L G
Sbjct: 413 MEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGL---KMNSVTLNTILHTLCG 469
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + S GY D ++Y ++ ++ GK + +L DEM P T
Sbjct: 470 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIIT 529
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K +++ LN + E G P + T++ G R G ++ F ++M
Sbjct: 530 YNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMV 589
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD+ +++ G L+KA LF+ I+KG+ + TYN++I G C +F+
Sbjct: 590 KKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFE 649
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA ++ EME + P+ YN ++S L +AG++ EA E + +VE+GK
Sbjct: 650 EAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGK 698
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 142/292 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G TFNILI C + + K K F+ P SYN IL L +
Sbjct: 203 VIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGK 262
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M + G P+ T+NI++ +LG L + +++D M ++ PD TYN+
Sbjct: 263 LNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNM 322
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A L + M+ + P V+ + TL++G + D+M KG
Sbjct: 323 LIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKG 382
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y V++ Y+ G+++ A + M G P+ T+N++I G+C AG+ EA
Sbjct: 383 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAF 442
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
MM EM +G N + NT++ L KL +A++++ ++G ++ VS
Sbjct: 443 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 134/281 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI C + + K E K + +P +YN ++ + + ++M
Sbjct: 354 TYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 413
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G++PD +T+N ++ + G+L + R++DEM R G + T N +LH L K
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 473
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A LL+ + G+ + + TL+ G + G +DEM K +P ++ Y M
Sbjct: 474 DDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTM 533
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I +G+ +++ D + ++ G +P+ TYN++I G+C G+ ++A +M +
Sbjct: 534 IGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSF 593
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ N L+ L G L +A ++ + KGK I V+
Sbjct: 594 KPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVT 634
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 143/352 (40%), Gaps = 75/352 (21%)
Query: 6 FPTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
FP IL +C G++ AR ++ + L P +N++N ++ + K
Sbjct: 244 FPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLL---PNRNTFNILVSGYCKLGWLKE 300
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V M+ PD+ TYN+++ + GK+D+ RL DEM PD TYN L++
Sbjct: 301 AAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLIN 360
Query: 124 -----------------VLGKGDKPLA------------------ALNLLNHMKEVGFDP 148
+ GKG KP A A N L M+E GF P
Sbjct: 361 GCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 420
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC--------------------------- 181
+ F TL++G +AG L DEM+ KG
Sbjct: 421 DCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLL 480
Query: 182 --------MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D V Y +I Y G+ +A L+D M K +P++ TYN+MI G C +
Sbjct: 481 SSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHS 540
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK D++ + E+ G P+ YNT++ G++ +A + MV+K
Sbjct: 541 GKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKS 592
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 111/222 (50%), Gaps = 3/222 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH---RLLDEMGRSGFSPDFHTYNILLH 123
++ +M P++LT N ++ A R + + ++ + G + +T+NIL++
Sbjct: 161 IFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIY 220
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+K A+ L+ MK+ P + + T++D L + G L+ + +M N G +P
Sbjct: 221 GCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLP 280
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ + ++++ Y G L++A + D M LP+V+TYN +I G C GK DEA +
Sbjct: 281 NRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLK 340
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EME+ P+ + YNTL++ + + E+I M KG
Sbjct: 341 DEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKG 382
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 24/260 (9%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N +I C G+ + + ++S L P + +YN I+ LG + +E +
Sbjct: 529 TYNTMIGGLCHSGKTDQSIDKLNELLESGLV---PDETTYNTII---LGYCREGQVEKAF 582
Query: 69 Q---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
Q +M + + PD+ T NI++ G LD+ +L + G + D TYN ++ L
Sbjct: 583 QFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGL 642
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K D+ A +LL M+E P + ++ L+ AG + + F + +G + D
Sbjct: 643 CKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQ 702
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
L K + ++ PN T++ I C GK+ +A M++E
Sbjct: 703 TI------------SLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHMVQE 750
Query: 246 MESRGCNPNFLVYNTLVSNL 265
+G + Y +L+ L
Sbjct: 751 STQKGITLHKSTYISLMEGL 770
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 7/267 (2%)
Query: 5 GFPT-TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
G PT T T+NI+I C G+ +A +V+E K +P + SY ++ I +
Sbjct: 464 GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELM---KANGCQPDEWSYTELISGFCKISK 520
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+L ++ +M D G P+ +TY ++ + KLD R+L+ M RSG P+ TYN+
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H L K + A L M E P V+ ++T+++GL G + F++M G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P++ Y+ +I + G +E+A+++F + +G +P+ TY MI M+GK D A
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRN 267
+ EM + GC P Y+ L+ L+N
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQN 727
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 114/258 (44%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +SYN ++ I + + M P ++TYNI++ G D R+
Sbjct: 433 PNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRV 492
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M +G PD +Y L+ K K A + N M + G P+ + +T L+ G +
Sbjct: 493 LELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCK 552
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
LD + M GC P+V Y V+I A++L M+ + P+V T
Sbjct: 553 DEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVT 612
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+++I G C G A M +M GC PN Y++L+ L G++ EA E+ +
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672
Query: 283 EKGKYIHLVSKFKRYKRC 300
++G V+ K + C
Sbjct: 673 KQGLIPDEVTYVKMIEVC 690
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 129/301 (42%), Gaps = 35/301 (11%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A ++ + KS + +P +Y +++ R ++ +M +EG
Sbjct: 238 LCKDGNVRDAESIINKVFKSGM---KPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGC 294
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT-----------------YN 119
P+ TY+ ++ G++++ + EM R G P HT +
Sbjct: 295 EPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWK 354
Query: 120 ILLHVLGKGDKP---------------LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
I + + KG KP A+ L + M G P+ + + LM+ L
Sbjct: 355 IFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENM 414
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D+ F+ M GC+P+ Y +I Y G+ EKA + M+ P + TYN
Sbjct: 415 EIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYN 474
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I+G+C +G D A +++ M++ GC P+ Y L+S K+ A + M+++
Sbjct: 475 IIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDR 534
Query: 285 G 285
G
Sbjct: 535 G 535
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 7/283 (2%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P T+ ++N LI CT G+ A ++ +K + P +YN I+
Sbjct: 432 LPNTS-SYNELIRGYCTIGDTEKAMSMLTNMLKGRP---TPTLVTYNIIIKGYCDSGDTD 487
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V + M G PD +Y ++ ++ K++ + +EM G P+ TY L+
Sbjct: 488 VAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALI 547
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K +K A +L MK G P+V + L+ GL++ N + M +
Sbjct: 548 SGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKIS 607
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y+ +I G + A ++F+ M+ G LPN+ TY+S+I+ G+ +EA M
Sbjct: 608 PDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEM 667
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E++ +G P+ + Y ++ +GK+ A + + M+ G
Sbjct: 668 FSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 137/322 (42%), Gaps = 40/322 (12%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ L+ ++ + V++R+ + +P YN++++AL + E + ++
Sbjct: 195 TYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDAESIINKV 254
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PD TY ++ R LD + + M G P+ TY+ L++ L +
Sbjct: 255 FKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRV 314
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTV 190
AL+ ++ M G P+V FT + L G + DA K F D M KGC P+V YT
Sbjct: 315 NEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFID-MKKKGCKPNVYTYTS 373
Query: 191 MIT----SYIAAG----------------------------ELEKAQDLFDGMITKGQLP 218
+I+ S +A G E++ A +F+ M G LP
Sbjct: 374 LISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLP 433
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N +YN +IRG+C G ++A +M+ M P + YN ++ ++G A V+
Sbjct: 434 NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVL 493
Query: 279 RHMVEKG------KYIHLVSKF 294
M G Y L+S F
Sbjct: 494 ELMKANGCQPDEWSYTELISGF 515
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 129/290 (44%), Gaps = 13/290 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G A T++ LI C G V A + + + P +++ A + AL
Sbjct: 289 MDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVL---PTVHTFTAPIVALCD 345
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL--DQFHRLLDEMGRSGFSPDF 115
+ + + ++ M +G P++ TY ++ + R+ ++ FHR M R G P+
Sbjct: 346 MGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRMAIGLFHR----MSRDGVVPNT 400
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L++VL + + +AL + N M + G P+ + L+ G G+ +
Sbjct: 401 VTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN 460
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M P +V Y ++I Y +G+ + A + + M G P+ ++Y +I GFC K
Sbjct: 461 MLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISK 520
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A M EM RG PN + Y L+S KL A ++ M G
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSG 570
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 136/345 (39%), Gaps = 63/345 (18%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ LI C ++ A +++ER +S RP +YN ++H L
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRS---GCRPNVQTYNVLIHGLTK 587
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + + M +E +PD++TY+ V+ G + + ++M + G P+ HT
Sbjct: 588 QNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHT 647
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ LG+ + A + + +K+ G P + + +++ +G +D F EM
Sbjct: 648 YSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMI 707
Query: 178 NKGCMPDVVCYTV-------------------------------------MITSYIAAGE 200
N GC P + Y V +++S +A +
Sbjct: 708 NAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELD 767
Query: 201 LEKAQDLFDG--------------------MITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
E ++ L+D M+++ Q PN TY + A K D A
Sbjct: 768 FELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAM 827
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K M + C + Y L+ L + EA V M+ +
Sbjct: 828 DVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRA 872
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 92/192 (47%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
++ Q LD + G TY LL L K + ++ + + G P++L +
Sbjct: 172 AEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIY 231
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
++++ L + GN+ + +++ G PD YT MI Y +L+ A ++F+ M
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G PN TY+++I G C +G+ +EA + EM G P + + L + G++ +
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351
Query: 274 AHEVIRHMVEKG 285
A ++ M +KG
Sbjct: 352 AWKIFIDMKKKG 363
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 124/314 (39%), Gaps = 63/314 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E T++ +I C G + LA ++ + +K P ++Y++++ AL
Sbjct: 601 MLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCL---PNLHTYSSLIQALGQ 657
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E ++ ++ +G PD +TY ++ GK+D+ L EM +G P T
Sbjct: 658 EGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQT 717
Query: 118 YNILLHVLGKG---DKPLAALN-------------------LLNHMKEVGFDPSVLHFTT 155
Y++L+ L K +A N L + + E+ F+ S +
Sbjct: 718 YDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDA 777
Query: 156 LMDGLSRAG-------------------NLDACKYF----------------FDEMANKG 180
L+ LSR+G N D K+F F M+++
Sbjct: 778 LLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQR 837
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C + Y +I + ++A+ +F+ M+++ + + +I G AG D
Sbjct: 838 CELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCM 897
Query: 241 TMMKEMESRGCNPN 254
+ ME+ NP+
Sbjct: 898 EFLHIMETNRRNPS 911
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 140 bits (354), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 147/300 (49%), Gaps = 8/300 (2%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T + +I G + K + F + K +P +YN+++ L+ QY+ + +
Sbjct: 157 VTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216
Query: 68 YQQMSDEGY-APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +MS+EG+ PD +TY+ ++ A +LG+ D RLL+EM +G P Y +++ +
Sbjct: 217 YNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFF 276
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K D AL+L M+ + P V +T L+ GL +AG +D +F+ EM +GC PD V
Sbjct: 277 KLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTV 336
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKE 245
MI AG L+ LF+ M +PNV TYN++I+ F + E + +
Sbjct: 337 VMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFER 396
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
M+ G +P+ Y+ L+ ++ +A ++ M EKG Y L+ + KR
Sbjct: 397 MKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG TA+ + ++I ++ + F + + RP +Y ++ L +
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR------------ 108
Y +M EG PD + N ++ + G+LD +L +EMG
Sbjct: 316 IDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNT 375
Query: 109 ------------------------SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
SG SP TY+IL+ K ++ A+ LL M E
Sbjct: 376 IIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEK 435
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
GF P + +L+D L +A D F E+ Y VMI AG L+ A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+LFD M G PNV+ YN+++ G A DEA T M++M+ GC P+ YN +++
Sbjct: 496 INLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNG 555
Query: 265 LRNAGKLAEAHEVIRHM 281
L G A E++ +M
Sbjct: 556 LAKTGGPHRAMEMLTNM 572
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 47 SYNAILHALL--GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+YN I+ AL R ++ W +++M G +P TY+I++ + ++++ LL+
Sbjct: 372 TYNTIIKALFESKSRVSEVFSW-FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLE 430
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM GF P Y L+ LGK + A L +KE S + ++ L +AG
Sbjct: 431 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAG 490
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
LD FDEM+ GC P+V Y +++ A L++A M G LP++ +YN
Sbjct: 491 RLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYN 550
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++ G G A M+ M++ P+ + YNT++S L +AG EA E+++ M
Sbjct: 551 IILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 41/245 (16%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF---SPDFHTYNILLHVLGKGDKPL 132
Y D TY ++ + + + +++ EM RS +P + ++ +LG
Sbjct: 119 YQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTP--MELSQVIRMLGNAKMIG 176
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVM 191
A+ + +K P+ + +++ L G + ++EM+N+G C PD V Y+ +
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSAL 236
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQL---------------------------------- 217
I+++ G + A L + M G
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC 296
Query: 218 -PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+VFTY +IRG AG+ DEA EM+ GC P+ +V N +++ L AG+L + +
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLK 356
Query: 277 VIRHM 281
+ M
Sbjct: 357 LFEEM 361
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G+ G + F + P +YNA++ L
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLD 528
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++M + G PDI +YNI++ + G + +L M S PD +YN +L
Sbjct: 529 EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L A L+ M +GF+ ++ ++++++ + +
Sbjct: 589 SALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P NSYN IL+ L + M + PD ++YN V+ A G ++ L
Sbjct: 544 PDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAEL 603
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ EM GF D TY+ +L +GK D+
Sbjct: 604 MKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++NI++ + G + +E K +P SYN +L AL
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
++ + ++M+ G+ D++TY+ ++ A +GK+DQ
Sbjct: 597 FEEAAELMKEMNALGFEYDLITYSSILEA---IGKVDQ 631
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/284 (32%), Positives = 134/284 (47%), Gaps = 7/284 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
N P T TF IL+ C G V AR V E K P +YNA++ Q
Sbjct: 297 NVMPNTV-TFTILVDGLCKEGMVSEARCVFEAMTKK---GAEPNAYTYNALMDGYCLNNQ 352
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V M D+G AP + +YNI++ + +LD+ LL EM +PD TY+
Sbjct: 353 MDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYST 412
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + +P ALNL M G P ++ ++TL+DGL + G+LD M
Sbjct: 413 LMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESK 472
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y ++I AG+LE A++LF + G P + TY MI+G G DEA
Sbjct: 473 IEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAY 532
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ ++ME G PN YN ++ + A +I MV K
Sbjct: 533 ELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGK 576
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 138/283 (48%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + NILI C V A V+ + K +P ++N +++ +
Sbjct: 122 GVTHNVYSLNILINCLCRLNHVVFAISVLGKMFK---LGIQPDAITFNTLINGRCIEGEI 178
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K ++ +M G+ PD+++Y+ V+ + G +LL +M G P+ Y +
Sbjct: 179 KEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTI 238
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A++LL+ M + G P V+ ++T++ G G+L+ F+EM +
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNV 298
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MP+ V +T+++ G + +A+ +F+ M KG PN +TYN+++ G+C+ + DEA
Sbjct: 299 MPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQK 358
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ M +GC P YN L++ +L EA ++ M EK
Sbjct: 359 VLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEK 401
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 122/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S N +++ L + V +M G PD +T+N ++ + G++ + L +EM
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G PD +Y+ +++ L K AL LL M+E G P+++ +TT++D L + +
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ EM ++G PDVV Y+ ++ + + G L +A LF+ M+ + +PN T+ +
Sbjct: 249 NDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTIL 308
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G C G EA + + M +G PN YN L+ ++ EA +V+ MV+KG
Sbjct: 309 VDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 120/246 (48%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N RP + L ++ +QY + + QM G ++ + NI++ RL +
Sbjct: 87 NPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFA 146
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G PD T+N L++ + A+ L N M G P V+ ++T+++G
Sbjct: 147 ISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING 206
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L ++GN +M KGC P++V YT +I S + A DL M+ +G P+
Sbjct: 207 LCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPD 266
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY++++ GFC G +EA + EM R PN + + LV L G ++EA V
Sbjct: 267 VVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFE 326
Query: 280 HMVEKG 285
M +KG
Sbjct: 327 AMTKKG 332
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 134/291 (46%), Gaps = 14/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+ G +++ +I C G +A RK+ E+ K L +Y I+
Sbjct: 188 MVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLV-------AYTTIID 240
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L + +M D G PD++TY+ ++ LG L++ L +EM P
Sbjct: 241 SLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+ IL+ L K A + M + G +P+ + LMDG +D +
Sbjct: 301 NTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC P V Y ++I Y L++A+ L M K P+ TY+++++G C
Sbjct: 361 DIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQV 420
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G+ EA + KEM S G P+ + Y+TL+ L G L EA ++++ M E
Sbjct: 421 GRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQES 471
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L F+R+L R P + L + K + ++L N M G +V
Sbjct: 77 LASFYRML----RMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ L R ++ +M G PD + + +I GE+++A LF+ M+ +G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P+V +Y+++I G C +G A ++++ME +GC PN + Y T++ +L + +A
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 276 EVIRHMVEKG 285
+++ MV++G
Sbjct: 253 DLLSEMVDRG 262
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%)
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
PSV+ F + +++ ++M G +V ++I + A +
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
M G P+ T+N++I G C+ G+ EA + EM RG P+ + Y+T+++ L
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
+G + A +++R M EKG +LV+
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVA 234
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 76/192 (39%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E T++ L+ +VG ++ + F + P +Y+ +L L
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M + PDI+ YNI++ + GKL+ L ++ G P TY I
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K A L M++ GF P+ + ++ G + + DEM K
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577
Query: 181 CMPDVVCYTVMI 192
D + +++
Sbjct: 578 FSADSSTFQMLL 589
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 6/165 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T++ L+ C G + A K+++ +SK+ P YN ++ +
Sbjct: 433 MCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI---EPDIVLYNILIEGMFI 489
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + ++ ++ +G P I TY I++ + G D+ + L +M GF P+ +
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCS 549
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
YN+++ + A+ L++ M F F L+D SR
Sbjct: 550 YNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLDLESR 594
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NGF A L+ + G + +E F ++ + P +Y A++HAL +
Sbjct: 35 MKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGK 93
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDFHTYN 119
+ + + ++M G APD +T++ ++ + G +Q R+L+++ + G + D
Sbjct: 94 FDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFET 153
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I+ + K + A +L + GF P+VL F +++G +A +LD+ + M K
Sbjct: 154 IIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 213
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC+P+V +T++IT A + +AQ L + M+T G PNV TY+++I G C G+ D+A
Sbjct: 214 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDA 273
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + ME R C PN + +N L+ L A ++ EA ++ M E G
Sbjct: 274 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 151/312 (48%), Gaps = 18/312 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G TF+ LI C G A +V+E I+ + N ++ I+ L
Sbjct: 104 MIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA---AFETIIQRL-- 158
Query: 58 IRQYKLIEWVYQQMS---DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+Y +E + + +G+ P +L +N+V+ + LD ++LL+ M G P+
Sbjct: 159 CNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPN 218
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+ IL+ L K ++ A LL M G P+V+ ++T+++GL + G +D F
Sbjct: 219 VFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 278
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M + C P+VV + ++I A +E+A+ L+ M G P++ TYNS+I G C +
Sbjct: 279 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 338
Query: 235 KFDEACTMMKEMESRGCN-PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KY 287
+ DEA + + + G + N + Y+TL G++A+A + +V+KG Y
Sbjct: 339 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 398
Query: 288 IHLVSKFKRYKR 299
L+ ++ + R
Sbjct: 399 TSLILEYCKTSR 410
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 9/289 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G TF ILI C VG A++++E+ + P +Y+ +++ L
Sbjct: 210 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTG---GCSPNVVTYSTVINGLCK 266
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q ++Q M P+++T+NI++ + ++++ +L M +G +PD T
Sbjct: 267 QGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIIT 326
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPS-VLHFTTLMDGLSRAGNL-DACKYFFDE 175
YN L+ L K + A L + E G + + ++TL G + G + DAC+ F
Sbjct: 327 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACR-IFSM 385
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +KG PD+ YT +I Y + +L + M +KG P V T ++++ G
Sbjct: 386 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 445
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ A + M +RGC + L+YN +V + A K +A V+ +++K
Sbjct: 446 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDK 494
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 70/274 (25%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-------------------------- 111
P+ TY I++ G LD +LL+EM +GF
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 112 --------SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR- 162
+PD TY L+H L K K A +L M G P + F+TL+DGL +
Sbjct: 67 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 163 -----------------AGNLDAC----------KYFFDEMAN--------KGCMPDVVC 187
GN DA KY E+A+ KG P V+
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++I + A +L+ A L + MI KG +PNVFT+ +I G C A + EA ++++M
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ GC+PN + Y+T+++ L G++ +A+E+ + M
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 280
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 123/265 (46%), Gaps = 5/265 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++ GF T+ LI + A +VVE + F P N+ +A+L L
Sbjct: 386 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 445
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFH 116
+ ++ M+ G D L YN+V+ R K L +++D+ R F+P
Sbjct: 446 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRK-FNPSSS 504
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ L+ L + + A LL+ M E GF +V + L+ GLSR D F+ M
Sbjct: 505 AVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ G P++ V+I+ +A +++ A +L M G P++ T N++I G+C +G+
Sbjct: 565 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 624
Query: 237 DEACTMMKEMESRGCNPNFLVYNTL 261
D A +++EM G PN ++ L
Sbjct: 625 DLARKLLEEMTEAGLEPNDTTHDLL 649
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +Y +++ + + + ++M+ +G+ P + T + V+ + ++
Sbjct: 391 FSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAI 450
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM---KEVGFDPSVLHFTTLM 157
+L D M G + D YN+++ + + K AL +L + ++ F+PS L+
Sbjct: 451 QLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALV 510
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ L + G D K +M+ +G V Y +++ ++A +F+ M++ G
Sbjct: 511 ESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPA 570
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P + T N +I C A K D+A +++ M GC P+ NTL+ +G+ A ++
Sbjct: 571 PEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKL 630
Query: 278 IRHMVEKG 285
+ M E G
Sbjct: 631 LEEMTEAG 638
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ TY IL+ A+ LL MK GF+ + + TTLM GL AG +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F MA K C PDV+ YT ++ + AG+ ++AQ + MI +G P+ T++++I G C
Sbjct: 67 FRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE-AHEVIRHMVEKG 285
G ++A +++++ RG + + T++ L N E A +V+ ++ KG
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
CMP+ Y ++I + +AG+L+ A L + M + G N + ++++G C AG+ EA
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M ++ C P+ + Y LV L AGK EA ++R M+ +G
Sbjct: 65 EHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG 108
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N++I + + G A + + + + P +Y+ ++ Q
Sbjct: 158 MLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQ 217
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V+ M +G P++ TY +M ++ ++++ +LLDE R G PD T+
Sbjct: 218 MDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTT 277
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + +PLAA L ++ G P+++ + L+DGL + GNL+ F EM
Sbjct: 278 IISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++V YT++I S G+++ ++LF +I +G PNV+TY +++ C G EA
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ME GC P+ YN ++ + A +++ MV +G
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRG 442
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 113/207 (54%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G P I+T+ ++ GK+DQ L D+M G P+ +TYN++++ L K K A
Sbjct: 127 GLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEA 186
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L L M++VG P+V++++TL+DG G +D + FD M +KGC P+V YT ++
Sbjct: 187 LGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNG 246
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
Y +E+A L D + KG +P++ T+ ++I G C AG+ A + + + + G PN
Sbjct: 247 YCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPN 306
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ Y L+ L G L EA + + M
Sbjct: 307 IMTYGVLLDGLCKHGNLEEAFALFQEM 333
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 135/287 (47%), Gaps = 12/287 (4%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + +ILI C V V+ + +K P ++ +L+ L +
Sbjct: 92 GIEQDIHSLSILINCFCHLHRVDFGLSVLSKILK---LGLEPSIVTFTTLLNGLCMEGKM 148
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +Y M G P++ TYN+++ + + GK ++ L +M + G P+ Y+ L
Sbjct: 149 DQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTL 208
Query: 122 LH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + G+ D+ + +L M G P+V +T+LM+G + ++ DE
Sbjct: 209 IDGYCLRGQMDEARSVFDL---MVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLR 265
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG +PD+V +T +I+ AG AQ LF + G PN+ TY ++ G C G +E
Sbjct: 266 KGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEE 325
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +EM+ PN ++Y L+ +L GK+ + E+ ++++G
Sbjct: 326 AFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEG 372
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 130/243 (53%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++ + +++ + Y+ + ++ +++ G DI + +I++ L ++D +
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G P T+ LL+ L K + L + M G P+V + +++ LS+
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+G + F +M GC+P+VV Y+ +I Y G++++A+ +FD M++KG PNV+T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S++ G+C + +EA ++ E +G P+ + + T++S L AG+ A ++ R++
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299
Query: 283 EKG 285
G
Sbjct: 300 AHG 302
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D LA+ L+ K + P ++ F+ L + R G+ + Y E+ G D+
Sbjct: 44 DDALASFRLMLLRKPL---PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I + ++ + ++ G P++ T+ +++ G CM GK D+ + +M
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG PN YN ++++L +GK EA ++ M + G
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVG 197
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 10/123 (8%)
Query: 67 VYQQMSDEGYAPDILTYNIVM-----CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++Q+M P+++ Y I++ C K + GK + F RL+DE G P+ +TY L
Sbjct: 329 LFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGK-ELFSRLIDE----GLKPNVYTYTAL 383
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A L M+E G P + ++ G + + + +EM N+G
Sbjct: 384 VGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443
Query: 182 MPD 184
D
Sbjct: 444 SAD 446
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 51/105 (48%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P Y ++ +L + K + ++ ++ DEG P++ TY ++ A + G + + H+
Sbjct: 339 KPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHK 398
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
L +M G +PD YN+++ + P A L+ M GF
Sbjct: 399 LFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 140 bits (353), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 141/287 (49%), Gaps = 8/287 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-PD 79
G + K + F + K +P +YN+++ L+ QY + +Y +MS EG+ PD
Sbjct: 170 GNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPD 229
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+TY+ ++ A +LG+ D +LL+EM +G P Y +L+ + K D AL+L
Sbjct: 230 TMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFE 289
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M+ P V +T L+ GL +AG +D +FF EM +GC PD V MI AG
Sbjct: 290 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAG 349
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKEMESRGCNPNFLVY 258
L+ A LF M T +P+V TYN++I+ F + E + + M+ G +P+ Y
Sbjct: 350 RLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 409
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ L+ ++ +A ++ M EKG Y L+ + KR
Sbjct: 410 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 3/272 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEWVYQ 69
N +I G+ G ++ F + P +YN I+ AL R ++ W ++
Sbjct: 337 VMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSW-FE 395
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M + G +P TY+I++ + ++++ LL+EM GF P Y L+ LGK
Sbjct: 396 RMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A L +KE S + ++ L +AG LD FDEM GC PDV Y
Sbjct: 456 RYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYN 515
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ G L++A M G +P++ +YN ++ G G A M+ M+
Sbjct: 516 ALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQS 575
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + YNT++ L +AG EA +++ M
Sbjct: 576 TVRPDVVSYNTVLGALSHAGMFEEAAKLMEEM 607
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G+ G + F + P +YNA++ L
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 528
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++M + G PDI +YNI++ + G + +L M +S PD +YN +L
Sbjct: 529 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 588
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L A L+ M +GF+ ++ ++++++ + +
Sbjct: 589 GALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N L+ G+ + + + + P NSYN IL+ L + M
Sbjct: 513 AYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 572
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
PD+++YN V+ A G ++ +L++EM GF D TY+ +L +GK D
Sbjct: 573 KQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVD 630
Score = 37.4 bits (85), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++NI++ + G + +E K RP SYN +L AL
Sbjct: 537 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 596
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
++ + ++M+ G+ D++TY+ ++ A +GK+D
Sbjct: 597 FEEAAKLMEEMNTLGFEYDLITYSSILEA---IGKVDH 631
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 134/245 (54%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
++P ++Y I++ L I + ++++M + G PD++TY+ ++ + + ++++
Sbjct: 6 YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+ M G SP+ TYN L+ L + A +LN M + P+++ F+ L++
Sbjct: 66 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 125
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ GN+ + M G P+VV Y+ ++ Y E+ +A+ LFD MITKG P+V
Sbjct: 126 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDV 185
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
F+YN +I G+C A + EA + EM +G P+ + YNTL+ L G+L EAH++ ++
Sbjct: 186 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 245
Query: 281 MVEKG 285
M+ G
Sbjct: 246 MLTNG 250
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 138/281 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G+ T+ +I ++G F K +P +Y+ I+ +L R+
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M +G +P+I TYN ++ + + +L+EM P+ T+++
Sbjct: 61 VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+++ K A +L M E+G +P+V+ +++LM+G S + + FD M KG
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PDV Y ++I Y A + +A+ LF+ MI +G P++ +YN++I G C G+ EA
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ K M + G P+ Y+ L+ G LA+A + R M
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAM 281
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 91/188 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + M++ G P+++TY+ +M ++ + +L D M G PD +YNIL++
Sbjct: 137 VLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYC 196
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A L N M G P ++ + TL+DGL + G L F M G +PD+
Sbjct: 197 KAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLC 256
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++++ + G L KA LF M + PN+ YN +I C + EA + E+
Sbjct: 257 TYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL 316
Query: 247 ESRGCNPN 254
+G PN
Sbjct: 317 FVQGLQPN 324
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 6/156 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++NILI C +G A+++ I L P SYN ++ L
Sbjct: 176 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL---TPDIVSYNTLIDGLCQ 232
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +++ M G PD+ TY+I++ + G L + RL M + P+
Sbjct: 233 LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVM 292
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
YNIL+ + K A L + + G P++ H+
Sbjct: 293 YNILIDAMCKSRNLKEARKLFSELFVQGLQPNMKHW 328
>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
Length = 615
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 151/306 (49%), Gaps = 16/306 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ GF A TF L+ C A +V R + P SYN +L L
Sbjct: 118 VVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE--LGCIPDVFSYNNLLKGLCD 175
Query: 58 I-RQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLG--------KLDQFHRLLDEM 106
R + +E ++ D G PD+++YN V+ ++ G +D+ +L+ M
Sbjct: 176 ENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTM 235
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
++G PD TYN +LH +P A+ L M+ G +P+V+ +++LM+ L + G
Sbjct: 236 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS 295
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FD M +G PD+ Y ++ + G + +++ LFD M+ G P++ TYN++
Sbjct: 296 TEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 355
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I G C+AGK DEA ++ M S G P+ + Y TL++ ++ +A + + MV G
Sbjct: 356 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 415
Query: 287 YIHLVS 292
++++
Sbjct: 416 SPNIIT 421
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 10/257 (3%)
Query: 43 PFKNSYNAILHALL--GIRQYKLIEW-------VYQQMSDEGYAPDILTYNIVMCAKYRL 93
P SYN +L+ GI Q KL V M G PD +TYN ++
Sbjct: 199 PDVVSYNTVLNGFFKEGI-QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSS 257
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+ + L +M G P+ TY+ L++ L K + A + + M + G +P + +
Sbjct: 258 GQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATY 317
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
TL+ G + G + + FD M G PD++ Y +I AG++++A L M++
Sbjct: 318 RTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 377
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P++ TY ++I G+C + D+A + KEM S G +PN + YN ++ L + + A
Sbjct: 378 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 437
Query: 274 AHEVIRHMVEKGKYIHL 290
A E+ + + G + L
Sbjct: 438 AKELYVSITKSGTQLEL 454
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 101/219 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN+ILH Q K ++M +G P+++TY+ +M + G+ + ++ D M
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G PD TY LL K + + + L + M +G P ++ + TL+DG AG +
Sbjct: 306 TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 365
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D M + G PD+V Y +I Y ++ A LF M++ G PN+ TYN +
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++G + A + + G YN ++ L
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 464
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 112/233 (48%), Gaps = 15/233 (6%)
Query: 68 YQQMSDEG---YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
Y +M+ G P + TY I++ R G+LD L + + GF D T+ LL
Sbjct: 77 YNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKG 136
Query: 125 LGKGDKPLAALNL-LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK---G 180
L + A+++ L M E+G P V + L+ GL MA+ G
Sbjct: 137 LCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGG 196
Query: 181 CMPDVVCYTVM--------ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
PDVV Y + I + + A ++KA ++ + M+ G +P+ TYNS++ G+C
Sbjct: 197 SPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCS 256
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G+ EA +K+M S G PN + Y++L++ L G+ EA ++ M ++G
Sbjct: 257 SGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 309
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 116/277 (41%), Gaps = 6/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+ L+ C G V + K+ + ++ +P +YN ++
Sbjct: 305 MTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR---IGVKPDIITYNTLIDGCCL 361
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PDI+TY ++ R+ ++D L EM SG SP+ T
Sbjct: 362 AGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 421
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + AA L + + G + + ++ GL + D F +
Sbjct: 422 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 481
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G +++A+DLF G +P+V TY+ M G +
Sbjct: 482 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 541
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
E + ME GC+ + + N++V L G + A
Sbjct: 542 ELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 86/275 (31%), Positives = 142/275 (51%), Gaps = 10/275 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N LI C G+ A + + ++ +N +P +++ ++ AL ++
Sbjct: 274 GISPTVVTYNSLIYGMCNSGQWKQASILFKEMLE---WNMKPDVVTFSILVDALC--KEG 328
Query: 62 KLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++E V+ +M PDI+TY+ ++ + + LL+EM PD T++
Sbjct: 329 VVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFS 388
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I + V K A +++N M E G P+V+ + +LMDG +D + FD M NK
Sbjct: 389 IWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNK 448
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC PDV+ Y ++I Y + +++A+ LFD M KG PN T+ ++I G C AG+ A
Sbjct: 449 GCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAA 508
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ K+M S GC P+ + Y+TL+S G L EA
Sbjct: 509 KELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEA 543
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 145/285 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E +++I+I + + L + V+ F + P +YN++++ + Q
Sbjct: 235 MVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQ 294
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K ++++M + PD++T++I++ A + G + + + +M + PD TY+
Sbjct: 295 WKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSS 354
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H + K + LLN M P V+ F+ +D + G + + + M +G
Sbjct: 355 LIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y ++++A+ +FD M+ KG P+V +YN +I+G+C + + DEA
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAK 474
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G PN + + TL+S L AG+ A E+ + M G
Sbjct: 475 QLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHG 519
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 139/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G+ T T +++ ++G + K + P SY+ I+ +L R
Sbjct: 200 IMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRL 259
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M G +P ++TYN ++ G+ Q L EM PD T++I
Sbjct: 260 VNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSI 319
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K L AL++ M ++ +P ++ +++L+ G+ ++ +EM ++
Sbjct: 320 LVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRN 379
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV +++ + + G + +AQ + + MI +G PNV TYNS++ G+C+ + DEA
Sbjct: 380 IRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEAR 439
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M ++GC P+ L YN L+ + ++ EA ++ M KG
Sbjct: 440 KVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E TF+IL+ + G+ + + F K P +Y++++H +
Sbjct: 305 MLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSL 364
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + +M PD++T++I + + G + + +++ M G P+ TYN
Sbjct: 365 WKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNS 424
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A + + M G P VL + L+ G ++ +D K FDEM++KG
Sbjct: 425 LMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKG 484
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + +T +I+ AG A++LF M + G P++ TY++++ GFC G DEA
Sbjct: 485 LTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEAL 544
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ + ++ PN ++ L+ + AGKL +A E+
Sbjct: 545 ALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKEL 581
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 127/250 (50%), Gaps = 2/250 (0%)
Query: 36 SKLFNFRPFK--NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
+++ + PF +N +L AL+ ++ Y + +Y++M G + + T I++ L
Sbjct: 93 NQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHL 152
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
+ +L ++ + GF P T+N L++ L + + A+ L+++ G+ P+V
Sbjct: 153 HLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTH 212
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
T +++GL + G A + +M C P+VV Y+++I S + +A DLF M +
Sbjct: 213 TMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRS 272
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P V TYNS+I G C +G++ +A + KEM P+ + ++ LV L G + E
Sbjct: 273 IGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLE 332
Query: 274 AHEVIRHMVE 283
A V M++
Sbjct: 333 ALSVFGKMIQ 342
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 138/317 (43%), Gaps = 36/317 (11%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
N FP + FN L+ + VV + K + F + +++ L + L
Sbjct: 99 NPFPCITQ-FNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGL 157
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V ++ G+ P I+T+N ++ G++ + LD + G+ P +T+ ++++
Sbjct: 158 GFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVN 217
Query: 124 VLGKGDKPLAAL-----------------------------------NLLNHMKEVGFDP 148
L K K AA+ +L HM+ +G P
Sbjct: 218 GLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISP 277
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V+ + +L+ G+ +G F EM PDVV +++++ + G + +A +F
Sbjct: 278 TVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVF 337
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
MI P++ TY+S+I G C + + E+ T++ EM SR P+ + ++ V
Sbjct: 338 GKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKK 397
Query: 269 GKLAEAHEVIRHMVEKG 285
G ++EA +I M+E+G
Sbjct: 398 GMVSEAQSIINLMIERG 414
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M + G P+++TYN +M ++D+ ++ D M G +PD +YNIL+ K ++
Sbjct: 410 MIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSER 469
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L + M G P+ + TTL+ GL +AG A K F +M + GC PD++ Y+
Sbjct: 470 IDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYST 529
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + G L++A LF+ + K QL PN ++ G C AGK ++A + +
Sbjct: 530 LLSGFCKHGHLDEALALFEAL-KKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIE 588
Query: 250 GCNPN 254
P+
Sbjct: 589 ELQPD 593
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 108/223 (48%), Gaps = 6/223 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ TF+I + C G V A+ ++ I+ L RP +YN+++
Sbjct: 375 MLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL---RPNVVTYNSLMDGYCL 431
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q V+ M ++G APD+L+YNI++ + ++D+ +L DEM G +P+ T
Sbjct: 432 HSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSIT 491
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ L + +P AA L M G P ++ ++TL+ G + G+LD F+ +
Sbjct: 492 HTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALK 551
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
P+ V +++ AG+LE A++LF + + P+V
Sbjct: 552 KSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 162/335 (48%), Gaps = 51/335 (15%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWV 67
T++ILI C ++ LA V+ + +K + P + N++L+ G R + V
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMK---LGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
QM + GY PD T+N ++ +R + + L+D M G PD TY I+++ L K
Sbjct: 175 -GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 128 -GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
GD LA L+LL M++ +P V+ + T++D L N++ F EM NKG P+VV
Sbjct: 234 RGDIDLA-LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 187 CY-----------------------------------TVMITSYIAAGELEKAQDLFDGM 211
Y + +I +++ G+L +A+ L+D M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
I + P++FTY+S+I GFCM + DEA M + M S+ C PN + YNTL+ A ++
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 272 AEAHEVIRHMVEKG------KYIHLVSKFKRYKRC 300
E E+ R M ++G Y L+ F + + C
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G+ + TFN LI A + V + + +P +Y +++ L
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGD 236
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L + ++M P ++ YN ++ A ++ L EM G P+ TYN
Sbjct: 237 IDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 296
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A LL+ M E +P+V+ F+ L+D + G L + +DEM +
Sbjct: 297 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ Y+ +I + L++A+ +F+ MI+K PNV TYN++I+GFC A + DE
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM RG N + Y TL+ A + A V + MV G
Sbjct: 417 ELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG 461
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ I++ C G++ LA ++++ + K+ P YN I+ AL
Sbjct: 212 MVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI---EPGVVIYNTIIDALCN 268
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M ++G P+++TYN ++ G+ RLL +M +P+ T
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K K + A L + M + DP + +++L++G LD K+ F+ M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C P+VV Y +I + A +++ +LF M +G + N TY ++I GF A + D
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G P+ + Y+ L+ L N GK+ A V ++
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 127/245 (51%), Gaps = 2/245 (0%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RPF + ++ +L A+ + ++ L+ + +QM + G + ++ TY+I++ R +L
Sbjct: 76 RPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLA 135
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G+ PD T N LL+ G++ A++L+ M E+G+ P F TL+ G
Sbjct: 136 LAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHG 195
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R D M KGC PD+V Y +++ G+++ A L M P
Sbjct: 196 LFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V YN++I C ++A + EM+++G PN + YN+L+ L N G+ ++A ++
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 280 HMVEK 284
M+E+
Sbjct: 316 DMIER 320
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 138/290 (47%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G A +++ I+ K+ P +++A++ A
Sbjct: 282 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI---NPNVVTFSALIDAF-- 336
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++ KL+E +Y +M PDI TY+ ++ +LD+ + + M P+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 396
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + + L M + G + + +TTL+ G +A D + F +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G +PD++ Y++++ G++E A +F+ + P+++TYN MI G C AGK
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + + +G PN + Y T++S G EA + R M E+G
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 139/285 (48%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + IK + P +Y+++++
Sbjct: 317 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 373
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + P+++TYN ++ + ++D+ L EM + G + T
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+H + + A + M G P ++ ++ L+DGL G ++ F+ +
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ Y +MI AG++E DLF + KG PNV TY +M+ GFC G +
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKE 553
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + +EM+ G P+ YNTL+ ++LR+ K A A E+IR M
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASA-ELIREM 597
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P I+ ++ ++ A ++ K D L ++M G S + +TY+IL++ + + AL +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M ++G++P ++ +L++G + +M G PD + +I
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+A L D M+ KG P++ TY ++ G C G D A +++K+ME P ++
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
YNT++ L N + +A + M KG ++V+ + RC
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT-YNSLIRC 300
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 117/251 (46%), Gaps = 6/251 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T++ LI C + A+ + E I F P +YN ++
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCK 408
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++++MS G + +TY ++ ++ + D + +M G PD T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMT 468
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K AL + +++ +P + + +++G+ +AG ++ F ++
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+VV YT M++ + G E+A LF M +G LP+ TYN++IR G
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKA 588
Query: 238 EACTMMKEMES 248
+ +++EM S
Sbjct: 589 ASAELIREMRS 599
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+NL M + PS++ F+ L+ +++ D ++M N G ++ Y+++I
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ +L A + M+ G P++ T NS++ GFC + +A +++ +M G P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +NTL+ L + +EA ++ MV KG LV+
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVT 223
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
KLD L +M +S P ++ LL + K +K ++L M+ +G ++ ++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L++ R L +M G PD+V ++ + + A L M+
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+ FT+N++I G + EA ++ M +GC P+ + Y +V+ L G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 275 HEVIRHMVEKGK 286
+++ M E+GK
Sbjct: 241 LSLLKKM-EQGK 251
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T++IL+ C G+V A V E +SK+ P +YN ++ +
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM---EPDIYTYNIMIEGMCK 513
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +S +G P+++TY +M R G ++ L EM G PD T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 118 YNILLHV-LGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLM 157
YN L+ L GDK A+ L+ M+ F D S + T M
Sbjct: 574 YNTLIRAHLRDGDKA-ASAELIREMRSCRFVGDASTIGLVTNM 615
>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 827
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 9/302 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQ 60
++GF + LI G R V F K + +P +YN IL + +G+
Sbjct: 210 KDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 269
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K I + M G APD TYN ++ R ++ ++ +EM SGFSPD T+N
Sbjct: 270 SK-ISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNT 328
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V GK +P A+ +L M+ GF PS++ + +L+ +R G L D+M KG
Sbjct: 329 LLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKG 388
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV YT +++ + AG E A +F M G PN+ T+N++I+ G+F E
Sbjct: 389 IKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMM 448
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKF 294
+ +E+E C P+ + +NTL++ G +E V + M E+ + L+S +
Sbjct: 449 KVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAY 508
Query: 295 KR 296
R
Sbjct: 509 SR 510
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 122/281 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T+N LI C L + + F + KL F P K ++N +L R+
Sbjct: 279 MKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRR 338
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V ++M G++P I+TYN ++ A R G L + L D+M G PD TY
Sbjct: 339 PKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTT 398
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL K A+ + M+ G P++ F L+ G F+E+
Sbjct: 399 LLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICN 458
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+V + ++ + G + +F M G +P T+N++I + G F +A
Sbjct: 459 CAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAM 518
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ K M G P+ YN +++ L G ++ +V M
Sbjct: 519 AVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEM 559
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIR 59
M E G T T+N+++ G++G+ + + K P +YN ++
Sbjct: 243 MEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGS 302
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Y+ V+++M G++PD +T+N ++ + + + +L EM SGFSP TYN
Sbjct: 303 LYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYN 362
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ + A+ L + M E G P V +TTL+ G +AG + F EM
Sbjct: 363 SLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAA 422
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ + +I + G + +F+ + P++ T+N+++ F G E
Sbjct: 423 GCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEV 482
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G P +NTL+S G +A V + M+E G
Sbjct: 483 SGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAG 528
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 138/312 (44%), Gaps = 42/312 (13%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF TFN LI CG A V +R +++ + P +SYNA+L AL
Sbjct: 489 MKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGV---TPDLSSYNAVLAALAR 545
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF------ 111
++ E V+ +M D P+ LTY ++ A ++++ H L +E+ SG
Sbjct: 546 GGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEI-YSGLTEPVPV 604
Query: 112 -----------------------------SPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
SPD T N ++ + G+ A +LN M
Sbjct: 605 LLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMN 664
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E GF PS+ + +LM SR+ N + + E+ KG PD++ Y +I +Y G ++
Sbjct: 665 ESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGRMK 724
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A +F M T G +P+V TYN+ + + F++A +++ M GC N YN++V
Sbjct: 725 DASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKRNQNTYNSIV 784
Query: 263 SNLRNAGKLAEA 274
+ A+A
Sbjct: 785 DGYCKHSRRADA 796
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 126/278 (45%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+GF TFN L+ G+ ++ +E + + F P +YN+++ A +
Sbjct: 317 SGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLRE 376
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ QM ++G PD+ TY ++ + G + R+ EM +G P+ T+N L+
Sbjct: 377 AMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIK 436
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ G + + + ++ P ++ + TL+ + G F EM G +P
Sbjct: 437 MHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 496
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ + +I++Y G ++A ++ M+ G P++ +YN+++ G ++++ +
Sbjct: 497 ERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVF 556
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EM+ C PN L Y +L+ N+ ++ H + +
Sbjct: 557 AEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEI 594
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 135/309 (43%), Gaps = 36/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V F + K F P ++++N ++ A ++ VY++M
Sbjct: 465 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM 524
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G PD+ +YN V+ A R G +Q ++ EM P+ TY LLH +
Sbjct: 525 LEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEI 584
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L + +P + TL+ S+ L ++ F+E+ KG PD+ M
Sbjct: 585 ERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGS-PDLSTLNAM 643
Query: 192 ITSY------IAAGEL-----------------------------EKAQDLFDGMITKGQ 216
I Y A E+ E+++++ ++ KG
Sbjct: 644 IAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGL 703
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ +YN++I +C G+ +A + M++ G P+ + YNT V++ +A
Sbjct: 704 KPDLISYNTVIFAYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIG 763
Query: 277 VIRHMVEKG 285
V+R+M++ G
Sbjct: 764 VVRYMIKHG 772
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 4/284 (1%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNSYNAILHALLGIRQY 61
+GF + T+N LI GL R+ +E +K ++ +P +Y +L
Sbjct: 352 SGFSPSIVTYNSLISAYARDGLLREAME--LKDQMVEKGIKPDVFTYTTLLSGFEKAGMD 409
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ +M G P+I T+N ++ G+ + ++ +E+ +PD T+N L
Sbjct: 410 EPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTL 469
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L V G+ + MK GF P F TL+ SR G+ + M G
Sbjct: 470 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGV 529
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+ Y ++ + G E+++ +F M PN TY S++ + + + + T
Sbjct: 530 TPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHT 589
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ S P ++ TLV L E + +KG
Sbjct: 590 LAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKG 633
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 139/326 (42%), Gaps = 34/326 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+ L+ + G+ + F + + +P ++NA++ +
Sbjct: 384 MVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGR 443
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + V++++ APDI+T+N ++ + G + + EM R+GF P+ T+N
Sbjct: 444 FAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNT 503
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A+ + M E G P + + ++ L+R G + + F EM +
Sbjct: 504 LISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGR 563
Query: 181 CMPDVVCYTVMITSYIAAGELEK----AQDLFDGM------------------------- 211
C P+ + Y ++ +Y + E+E+ A++++ G+
Sbjct: 564 CKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETE 623
Query: 212 -----ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+ K P++ T N+MI + +A ++ M G +P+ YN+L+
Sbjct: 624 HAFEELKKKGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATYNSLMYMHS 683
Query: 267 NAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + EV++ ++ KG L+S
Sbjct: 684 RSENFERSEEVLKEILAKGLKPDLIS 709
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 7/184 (3%)
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ +LGK K AA ++LN++++ GFD V +T+L+ + G F +M +
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE 246
Query: 180 GCMPDVVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC P ++ Y V++ Y G K L GM + G P+ +TYN++I ++E
Sbjct: 247 GCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEE 306
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + +EM+ G +P+ + +NTL+ + + EA EV++ M G Y L+S
Sbjct: 307 AAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLIS 366
Query: 293 KFKR 296
+ R
Sbjct: 367 AYAR 370
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 99/259 (38%), Gaps = 71/259 (27%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFH-----------------------------------TY 118
GK+ +L+ + + GF D + TY
Sbjct: 196 GKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITY 255
Query: 119 NILLHVLGKGDKPLAALNLLNH------------------------------------MK 142
N++L+V GK P + ++ L H MK
Sbjct: 256 NVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMK 315
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
GF P + F TL+D ++ EM G P +V Y +I++Y G L
Sbjct: 316 LSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLISAYARDGLLR 375
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A +L D M+ KG P+VFTY +++ GF AG + A + EM + GC PN +N L+
Sbjct: 376 EAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALI 435
Query: 263 SNLRNAGKLAEAHEVIRHM 281
N G+ AE +V +
Sbjct: 436 KMHGNRGRFAEMMKVFEEI 454
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 145/320 (45%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ G T+N LI +G ++VV + +P +Y ++L+ L +
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M +G P++ Y I++ G L + H LL+ M +G SPD H +NI
Sbjct: 324 CREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD------------- 167
+ K A+++ N MK+ G P V++F L+D L + G +D
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 168 ----------------------ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
K F+ EM N+G PDVV + ++ + G++ KAQ
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L D M G P+V +Y ++I G C+ G+ DEA + M S G P+ YNTL+
Sbjct: 504 RLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
AG++ +A+ V R M+ G
Sbjct: 564 CRAGRIDDAYGVFREMLRNG 583
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 35/304 (11%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
G K F++ +P +Y ++ L + E V+QQM D+G PD TY
Sbjct: 217 GQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTY 276
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL-----------------G 126
N ++ +GK + R+L+EM G PD +TY LL+ L
Sbjct: 277 NCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIR 336
Query: 127 KGDKPLAAL------------------NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
KG KP A+ +LLN M E G P F + ++ +D
Sbjct: 337 KGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDE 396
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ F++M +G PDVV + +I + G ++ A F+ M+ +G PN+F +NS++
Sbjct: 397 AMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVY 456
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
G C K+++A EM ++G P+ + +NT++ NL G++ +A +I M G
Sbjct: 457 GLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRP 516
Query: 289 HLVS 292
++S
Sbjct: 517 DVIS 520
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 136/289 (47%), Gaps = 6/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + ILI T G + ++ +++ L P + +N I A
Sbjct: 334 MIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGL---SPDHHIFNIIFTAYAK 390
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +M +G +PD++ + ++ A +LG++D ++M G +P+
Sbjct: 391 KAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFV 450
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L DK A M G P V+ F T++ L G + + D M
Sbjct: 451 FNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLME 510
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDV+ YT +I + G +++A D M++ G P+ +TYN+++ G+C AG+ D
Sbjct: 511 RVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRID 570
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+A + +EM G P + Y+T++ L + +EA E+ +M+ GK
Sbjct: 571 DAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 129/284 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ENG FNI+ + + + + F K K P ++ A++ AL + +
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGR 428
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM +EG AP+I +N ++ + K ++ EM G PD +N
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L L + + A L++ M+ VG P V+ +TTL+ G G +D D M + G
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD Y ++ Y AG ++ A +F M+ G P V TY++++ G +F EA
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M + G N +YN +++ L + EA ++ + + K
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 121/234 (51%), Gaps = 11/234 (4%)
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPD 114
R + ++ + ++M + G PD+++YN ++ C + R + L+ H + D GRS P+
Sbjct: 144 RLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRS-CPPN 202
Query: 115 FHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+Y +++ G+ DK A NL M + G P+V+ +TT++DGL +A +D +
Sbjct: 203 VVSYATVINGFFTEGQVDK---AYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEG 259
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F +M +KG PD Y +I Y++ G+ ++ + + M G P+ +TY S++ C
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLC 319
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ EA M +G PN +Y L+ G L+E H+++ MVE G
Sbjct: 320 NNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 111/248 (44%), Gaps = 39/248 (15%)
Query: 77 APDILTYNIVMCAKYRLGKLDQ------------------------------------FH 100
PD+ TY+I++ R+G+L+
Sbjct: 91 TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV---GFDPSVLHFTTLM 157
L+ M G +PD +YN LL + AL LL+ M + P+V+ + T++
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+G G +D F EM ++G P+VV YT +I A +++A+ +F MI KG
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+ TYN +I G+ GK+ E M++EM + G P+ Y +L++ L N G+ EA
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330
Query: 278 IRHMVEKG 285
M+ KG
Sbjct: 331 FDSMIRKG 338
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 10/289 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
M+ G FN ++C T G+V A+++++ + RP SY ++ H L
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER---VGTRPDVISYTTLIGGHCL 530
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+G + M G PD TYN ++ R G++D + + EM R+G +P
Sbjct: 531 VG--RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ +LH L + A L +M G ++ + +++GLS+ +D F
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +K ++ + +MI + +G E A LF + + G +P+VFTY + G
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+E + ME G PN + N LV L + G + A + + EK
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEK 757
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 152/302 (50%), Gaps = 17/302 (5%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNS-YNAILHALLGIR 59
+ F A T++ ++ C GE A ++E K+++ P YN IL L
Sbjct: 1691 SSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEV----PANAKLYNIILTHLCKHG 1746
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ K + M+ APDI TYNI++ A ++G+L+ L++ M D TYN
Sbjct: 1747 KEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIVTYN 1806
Query: 120 ILLHVL---GKGD-KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
L+H L G G + A L M + G P+ + +T ++D L R + + D
Sbjct: 1807 TLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDL 1866
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M GC D+V Y ++I + AG ++KA DLF M T+G +P+V TYNS++ GFC AGK
Sbjct: 1867 MHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGK 1926
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG-----KYIHL 290
+EA + EM++RG PN Y ++ AG++ +AH + M ++G Y+ L
Sbjct: 1927 VEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVAL 1986
Query: 291 VS 292
+S
Sbjct: 1987 IS 1988
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 138/283 (48%), Gaps = 17/283 (6%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN---SYNAILHALL--GIRQYKL 63
T+NILI C G + A+ +VE + R +YN ++H L G ++++
Sbjct: 1769 TYNILINALCKVGRLEDAQGLVE------MMQARECPTDIVTYNTLIHGLCRKGNGRFRV 1822
Query: 64 IEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M D+G+ P +TY +V+ A R+ +Q ++LD M +G + D TYN+L
Sbjct: 1823 ERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNML 1882
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K A++L M G P V+ + +++DG +AG ++ F EM +G
Sbjct: 1883 INRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGKVEEANKLFAEMKARGI 1942
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ YT + + + AG ++ A M +G L + +Y ++I C GK
Sbjct: 1943 FPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEG-LVDAISYVALISTICKLGKGKLGFQ 2001
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+++EM +G PN + +N + L +A +I+ + ++
Sbjct: 2002 LLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQ 2044
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 114/256 (44%), Gaps = 15/256 (5%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNF---------RPFKNSYNAILHALLG 57
PT T+N LI GL RK RF + F P +Y ++ ALL
Sbjct: 1799 PTDIVTYNTLI-----HGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLR 1853
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + V M + G A D++TYN+++ + G +D+ L EM G PD T
Sbjct: 1854 VKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVT 1913
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ K K A L MK G P+ +T++ D +AG + + EM
Sbjct: 1914 YNSIVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMR 1973
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + D + Y +I++ G+ + L M+ KG PN+ T+N + D
Sbjct: 1974 KEG-LVDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTD 2032
Query: 238 EACTMMKEMESRGCNP 253
+A M++E+ + +P
Sbjct: 2033 DAKIMIQELRQQHSSP 2048
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 4/195 (2%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ E S F + TY+ ++ + + AL LL HMK+ + + ++ L
Sbjct: 1684 LIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILTHLC 1743
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G MA C PD+ Y ++I + G LE AQ L + M + ++
Sbjct: 1744 KHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARECPTDIV 1803
Query: 222 TYNSMIRGFCMAG----KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
TYN++I G C G + + A + +EM +G P + Y ++ L +A +V
Sbjct: 1804 TYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKV 1863
Query: 278 IRHMVEKGKYIHLVS 292
+ M E G LV+
Sbjct: 1864 LDLMHENGCAFDLVT 1878
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 5/184 (2%)
Query: 107 GRSGFSPDFHTYNILLHVL-GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
GR G++ +N LL L K A L+ K F + ++T++ G G
Sbjct: 1653 GRHGYTHTAFAFNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGE 1712
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ M + Y +++T G+ ++A DL M T P+++TYN
Sbjct: 1713 TRQALALLEHMKKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNI 1772
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG----KLAEAHEVIRHM 281
+I C G+ ++A +++ M++R C + + YNTL+ L G ++ A + M
Sbjct: 1773 LINALCKVGRLEDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEM 1832
Query: 282 VEKG 285
V+KG
Sbjct: 1833 VDKG 1836
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG T+N+LI + G+ K ++ F++ P +YN+I+ +
Sbjct: 1867 MHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIVDGFCKAGK 1926
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G P+ TY + A + G++ H L EM + G D +Y
Sbjct: 1927 VEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV-DAISYVA 1985
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + K K LL M E GF P+++ F + + LS+ N D K E+ +
Sbjct: 1986 LISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTDDAKIMIQELRQQH 2045
Query: 181 CMP 183
P
Sbjct: 2046 SSP 2048
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 140 bits (352), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 139/280 (49%), Gaps = 6/280 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFI--KSKLFNFRPFKNSYNAILHALLGI-RQYKLIE 65
TF ILI C V A +V E+ +S F P +YN ++ L + RQ + +
Sbjct: 342 TFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLG 401
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V + S P+ +TYN ++ + ++ L D+M + G P+ T N L+ +
Sbjct: 402 LVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGM 461
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + A+ N M+ G + + +T L+ N++ FDEM GC PD
Sbjct: 462 CKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDA 521
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y +I+ AG+L++A + M G P++ ++N +I GFC K DEA M+KE
Sbjct: 522 IVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKE 581
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
ME+ G P+ + YNTL+S+ G + AH +++ MV++G
Sbjct: 582 MENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 138/284 (48%), Gaps = 1/284 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G P T N L+ + G VE F + + + +Y A++ A +
Sbjct: 442 MNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNN 501
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M + G +PD + Y ++ + GKLD+ +L +M +GFSPD ++N+
Sbjct: 502 IEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNV 561
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + +K A +L M+ G P + + TL+ S+ G+ +M +G
Sbjct: 562 LINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEG 621
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP-NVFTYNSMIRGFCMAGKFDEA 239
+P VV Y +I +Y G L++A +F M + ++P N YN +I C + D A
Sbjct: 622 LVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLA 681
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++M +M+ +G PN +N + L+ L++A E++ M E
Sbjct: 682 LSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M +G + +TY ++ A + +++ L DEM +G SPD Y L+ L +
Sbjct: 474 FNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQ 533
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A +L+ MKE GF P ++ F L++G R LD EM N G PD V
Sbjct: 534 AGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVT 593
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I+ + G+ A L M+ +G +P V TY ++I +C+ G DEA + ++M
Sbjct: 594 YNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMS 653
Query: 248 SRG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S PN ++YN L+++L ++ A ++ M KG
Sbjct: 654 STSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 128/252 (50%), Gaps = 6/252 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S NA+L AL R++K + + +M + P+++T+ I++ + ++D+ + ++M
Sbjct: 307 SCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366
Query: 107 G---RSGF--SPDFHTYNILLHVLGKGDKPLAALNLLNHMK-EVGFDPSVLHFTTLMDGL 160
+GF PD TYN L+ L K + L L+ M+ + P+ + + L+DG
Sbjct: 367 NGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGY 426
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+A ++A + FD+M G P+VV ++ G + A + F+ M KG N
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY ++IR FC ++A + EM GC+P+ +VY TL+S L AGKL A V+
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546
Query: 281 MVEKGKYIHLVS 292
M E G +VS
Sbjct: 547 MKEAGFSPDIVS 558
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 123/276 (44%), Gaps = 1/276 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G A T+ LI V K +E F + P Y ++ L +
Sbjct: 481 GLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRA 540
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+V +M + G++PDI+++N+++ R KLD+ + +L EM +G PD TYN L+
Sbjct: 541 SFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISH 600
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMP 183
K A L+ M + G P+V+ + L+ GNLD A K F D + P
Sbjct: 601 FSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPP 660
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ V Y ++I S +++ A L D M KG PN T+N+M +G +A +M
Sbjct: 661 NTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELM 720
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
M CNP+++ L L G+ A+ ++
Sbjct: 721 DRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G +VER P +YN ++ + ++
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQP--RCMPNTVTYNCLIDGYCKASMIEAARELF 439
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM+ +G P+++T N ++ + G+++ +EM G + TY L+
Sbjct: 440 DQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNV 499
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ L + M E G P + + TL+ GLS+AG LD + +M G PD+V +
Sbjct: 500 NNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSF 559
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+I + +L++A ++ M G P+ TYN++I F G F A +MK+M
Sbjct: 560 NVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVK 619
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G P + Y L+ G L EA ++ R M K
Sbjct: 620 EGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 7/214 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E GF +FN+LI C ++ A ++++ + + +P +YN ++
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGI---KPDGVTYNTLISHFSK 603
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR-SGFSPDFH 116
+ + ++M EG P ++TY ++ A G LD+ ++ +M S P+
Sbjct: 604 TGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV 663
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
YNIL++ L + ++ AL+L++ MK G P+ F + GL L D M
Sbjct: 664 IYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM 723
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
C PD + ++ A GE K + G
Sbjct: 724 TEHACNPDYITMEILTEWLSAVGETAKLKSFVQG 757
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 13/211 (6%)
Query: 84 NIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFHTYNILLHVLGKGDKPLAALN----- 136
NI++ +R G++D LLDEM ++ F P+ +T +I+ L K DK A++
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIV 255
Query: 137 -LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L++ E P+ + T L+ L R+G D + G + + ++T+
Sbjct: 256 GLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTAL 315
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM---ESRG-- 250
A E ++ L M PNV T+ +I C + DEA + ++M ES G
Sbjct: 316 GRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFL 375
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + YNTL+ L G+ E ++ M
Sbjct: 376 VEPDVITYNTLIDGLCKVGRQEEGLGLVERM 406
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 140 bits (352), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 142/287 (49%), Gaps = 8/287 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-PD 79
G + R+ + F + K +P +YN+++ L+ QY+ + +Y +MS EG+ PD
Sbjct: 137 GNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPD 196
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+TY+ ++ A +LG+ D +LL+EM G P Y +L+ + K + AL+L
Sbjct: 197 TVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFE 256
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M+ P V +T L+ GL +AG +D +FF EM +GC PD V MI AG
Sbjct: 257 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG 316
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKEMESRGCNPNFLVY 258
L+ A LF M T +P+V TYN++I+ F + E + + M+ G +P+ Y
Sbjct: 317 RLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 376
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ L+ ++ +A ++ M EKG Y L+ + KR
Sbjct: 377 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 423
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 127/270 (47%), Gaps = 3/270 (1%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEWVYQQM 71
N +I G+ G ++ F + + P +YN I+ AL R ++ W +++M
Sbjct: 306 NNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSW-FERM 364
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G +P TY+I++ + ++++ LL+EM GF P Y L+ LGK +
Sbjct: 365 KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 424
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L +KE S + ++ L +AG LD FDEM GC PDV Y +
Sbjct: 425 DLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNAL 484
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
++ G L++A M G +P++ +YN ++ G G A M+ M+
Sbjct: 485 MSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTV 544
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + YNT++ L +AG EA ++++ M
Sbjct: 545 RPDVVSYNTVLGALSHAGMFEEASKLMKEM 574
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 38/288 (13%)
Query: 36 SKLFNFRPFKNSYNAILHALLGIRQY----KLIE-------------------------- 65
+K N+ ++Y A++H L + QY K+I+
Sbjct: 81 AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAK 140
Query: 66 ------WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS-PDFHTY 118
++ Q+ P YN ++ G+ ++ H+L +EM G PD TY
Sbjct: 141 MVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTY 200
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L+ K + +A+ LLN MKE+G P+ +T L+ + + F+EM +
Sbjct: 201 SALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRH 260
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ C PDV YT +I AG +++A F M +G P+ N+MI AG+ D+
Sbjct: 261 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDD 320
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKG 285
A + +EME+ C P+ + YNT++ L + + +E M E G
Sbjct: 321 AMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 368
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G+ G + F + P +YNA++ L
Sbjct: 436 ENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLD 495
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++M + G PDI +YNI++ + G + +L M +S PD +YN +L
Sbjct: 496 EALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVL 555
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L A L+ M +GF+ ++ ++++++ + +
Sbjct: 556 GALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 51/118 (43%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N L+ G+ + + + + P NSYN IL+ L + M
Sbjct: 480 AYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 539
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
PD+++YN V+ A G ++ +L+ EM GF D TY+ +L +GK D
Sbjct: 540 KQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVD 597
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++NI++ + G + +E K RP SYN +L AL
Sbjct: 504 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGM 563
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++ + ++M+ G+ D++TY+ ++ A +GK+D H D+
Sbjct: 564 FEEASKLMKEMNTLGFEYDLITYSSILEA---IGKVD--HEYTDQ 603
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 152/323 (47%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T TFN ++ C GEVG A +V++ ++F P SYN +++ L G
Sbjct: 198 MIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVM---RMFGCDPNDVSYNVLVNGLSG 254
Query: 58 IRQYKLIEWVYQQMS-----------------------------------DEGYAPDILT 82
++ + + +QMS G P ++T
Sbjct: 255 KGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVT 314
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN +M + RLG++ R LD M PD +YN L++ + AL L + ++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
PSV+ + TL+DG R GNLD K D+M G PDVV +T+++ + G L
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A++LFD M+++G P+ Y + I G G +A M +EM++ G P+ + YN L+
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L G +A+E+++ M +G
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEG 517
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 139/285 (48%), Gaps = 7/285 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+N P+ T+N LI C G + +A+ + + IK L P ++ ++ +
Sbjct: 376 KNLVPSVV-TYNTLIDGGCRTGNLDIAKGMKDDMIKHGLC---PDVVTFTILVRGFCQMG 431
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + ++ +M G PD + Y + + +LG + + +EM GF PD TYN
Sbjct: 432 NLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYN 491
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L++ L K A L+ M+ G P + +T+++ +G L + F +M K
Sbjct: 492 VLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKK 551
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P VV YTV+I SY G L+ A+ FD M KG PNV TYN++I G C D A
Sbjct: 552 GIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVA 611
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ EMES+G +PN Y L++ N +A ++ + M+++
Sbjct: 612 YNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDR 656
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T T+N + +C G V AR+ ++ + L P SYN +++
Sbjct: 303 MLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLM---PDLVSYNTLIYGYSR 359
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ ++ + P ++TYN ++ R G LD + D+M + G PD T
Sbjct: 360 LGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVT 419
Query: 118 YNILL-----------------HVLGKGDKP------------------LAALNLLNHMK 142
+ IL+ +L +G KP A + MK
Sbjct: 420 FTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK 479
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
GF P ++ + L++GL + GN D +M +G +PD V YT +I +++ +G L
Sbjct: 480 AEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLR 539
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA+++F M+ KG P+V TY +I + + G+ D A EM+ +G +PN + YN L+
Sbjct: 540 KAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALI 599
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L + A+ + M KG
Sbjct: 600 YGLCKENMMDVAYNLFAEMESKG 622
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 131/274 (47%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G TF IL+ C G + +A+++ + + L +P +Y + L
Sbjct: 408 MIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL---KPDCIAYTTRIVGELK 464
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M EG+ PD++TYN+++ +LG D + L+ +M G PD T
Sbjct: 465 LGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVT 524
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++H A + + M + G PSV+ +T L+ + G LD K +FDEM
Sbjct: 525 YTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQ 584
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+V+ Y +I ++ A +LF M +KG PN +TY +I +
Sbjct: 585 DKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQ 644
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+A + K+M R P+ ++ L+ +L KL
Sbjct: 645 DALKLYKDMLDREIKPDSCTHSALMKHLSKDYKL 678
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 113/238 (47%), Gaps = 2/238 (0%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L L +E VY M P I+T+N +M ++ + G++ + +LD M
Sbjct: 176 NRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRM 235
Query: 109 SGFSPDFHTYNILLHVL-GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G P+ +YN+L++ L GKG+ A L+ M +G S + L+ G + +
Sbjct: 236 FGCDPNDVSYNVLVNGLSGKGEFDRAK-ELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFE 294
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
EM +G +P VV Y ++ S G + A+ D M+ + +P++ +YN++I
Sbjct: 295 EANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLI 354
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ G F EA + E+ S+ P+ + YNTL+ G L A + M++ G
Sbjct: 355 YGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%)
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M +G PD N +L +L + + M + P+++ F T+MD + G
Sbjct: 162 KMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEG 221
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ D M GC P+ V Y V++ GE ++A++L + M G + TYN
Sbjct: 222 EVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYN 281
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+IRGFC F+EA + +EM RG P + YNT++ +L G++++A + MV +
Sbjct: 282 PLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNE 341
Query: 285 GKYIHLVS 292
LVS
Sbjct: 342 DLMPDLVS 349
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 6/142 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G + T+ +LI G + A+K + + P +YNA+++ L
Sbjct: 548 MLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGV---SPNVITYNALIYGLCK 604
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M +G +P+ TY I++ L +L +M PD T
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664
Query: 118 YNILLHVLGKGDKPLAALNLLN 139
++ L+ L K K LA L L N
Sbjct: 665 HSALMKHLSKDYKLLAVLRLEN 686
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G +RTF +LI C +G A ++++ K N P SY A+++ L
Sbjct: 106 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR---NLVPSAVSYGAMINGLCH 162
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L + ++M+ G P+++ Y+ ++ G++++ RLLD M SG +PD
Sbjct: 163 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 222
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K K A L ++ G P + F + G S+ G + +FDEM
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Query: 178 NKGCMPDVVCYTVMITSYIAAGEL-----------------------------------E 202
+ G MP+ YTV+I + AG L +
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 342
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A +F + KG +P+VFTY+S+I GFC G+ ++A + EM +G PN +YN LV
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 402
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L +G + A ++ M EKG
Sbjct: 403 DGLCKSGDIQRARKLFDGMPEKG 425
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 113/218 (51%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M D G P+ Y +++ ++ G L + + + G PD T + +H L K
Sbjct: 278 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 337
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ AL + + +KE G P V +++L+ G + G ++ DEM KG P++
Sbjct: 338 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 397
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ +G++++A+ LFDGM KG P+ TY++MI G+C + EA ++ EM
Sbjct: 398 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 457
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S+G P+ VYN LV G + +A + R M++KG
Sbjct: 458 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 495
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 142/291 (48%), Gaps = 1/291 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G + +LI + G + + F P + +A +H LL +
Sbjct: 281 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 340
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ ++ ++G PD+ TY+ ++ + G++++ L DEM G +P+ YN
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A L + M E G +P + ++T++DG ++ N+ F EM +KG
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P Y ++ G++EKA +LF M+ KG ++N++I G+C + K EA
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEAS 519
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ +EM ++ P+ + Y T++ AGK+ EA+ + + M E+ + V
Sbjct: 520 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 570
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 35/278 (12%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y I L ++ + +++M G PD + ++ R G +D+ R+
Sbjct: 8 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 67
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGK-----------------GDKPLA------------ 133
D M G + TYN+L+H L K G KP +
Sbjct: 68 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127
Query: 134 ------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL LL+ M++ PS + + +++GL +L ++M G P+VV
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ +I Y + G +E+A+ L DGM G P++F YN++I AGK +EA T + E++
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG P+ + + + GK+ EA + M++ G
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 285
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 125/300 (41%), Gaps = 18/300 (6%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G T++ LI + G K E + L P YNA++ L +
Sbjct: 353 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 412
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++ M ++G PD +TY+ ++ + + + L EM G P YN L+
Sbjct: 413 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 472
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H K A+NL M + GF + L F TL+DG ++ + F EM K M
Sbjct: 473 HGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 531
Query: 183 PDVVCYTVMITSYIAAGELEKAQ-----------------DLFDGMITKGQLPNVFTYNS 225
PD V YT +I + AG++E+A LF+ M+ KG P+ TY
Sbjct: 532 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGL 591
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I C EA + E+ +G +++ L++ L L EA +++ M E G
Sbjct: 592 VIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELG 651
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
MG G P+ +TY I+ L + + A M++ G P + L+DG R G+
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+D D M + G +++ Y V+I G++EKA ++ GMIT G PN T+
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G+C A ++ EME R P+ + Y +++ L + L+ A++++ M G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 114/278 (41%), Gaps = 21/278 (7%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ ARK+ + + L P +Y+ ++ ++ +M +G
Sbjct: 405 LCKSGDIQRARKLFDGMPEKGL---EPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGV 461
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P YN ++ + G +++ L EM + GF+ ++N L+ K K A
Sbjct: 462 QPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQ 520
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN-----------------K 179
L M P + +TT++D +AG ++ F EM K
Sbjct: 521 LFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAK 580
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD V Y ++I ++ L +A L D ++ KG L ++ +I C EA
Sbjct: 581 GVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEA 640
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
++ EM G P+ +TLV + AGK+ EA V
Sbjct: 641 SKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 678
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
M++ GF TT +FN LI C ++ A ++ + I ++ P +Y ++ H
Sbjct: 491 MLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIM---PDHVTYTTVIDWHCK 546
Query: 56 LG-----------IRQYKLIE----WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
G +++ LI ++++M +G PD +TY +V+ A + L +
Sbjct: 547 AGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAF 606
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L DE+ G +++L+ L K + A LL+ M E+G PS+ +TL+
Sbjct: 607 KLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSF 666
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
AG +D F+ + + G +PD ++ + + E A++L ++
Sbjct: 667 HEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%)
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M KG +PN +TY + G C A + +EA +EM+ G P++ + L+ G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
+ E + MV G I+L++
Sbjct: 61 IDEVLRIKDVMVSCGIPINLIT 82
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 142/284 (50%), Gaps = 5/284 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+ ++ C G+ A ++ + ++ + +P Y+AI+ L
Sbjct: 204 MVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM--EEMSHIKPNVVIYSAIIDGLWK 261
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +Y +M ++G PD+ TYN ++ G+ + RLL EM +P+ T
Sbjct: 262 DGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVT 321
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L++ K K A L + M G P+ + + +++DG + LDA ++ F MA
Sbjct: 322 YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMA 381
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PDV + +I Y A ++ +L M G + + TYN++I GFC+ G +
Sbjct: 382 TKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN 441
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + ++M S G P+ + NTL+ L + GKL +A E+ + M
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 485
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 115/250 (46%), Gaps = 11/250 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ ++ + + Q+M + P+++TY+ ++ A + K + L DEM
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ TYN ++ K ++ AA ++ M G P V F TL+DG A +
Sbjct: 346 LPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D EM G + D Y +I + G+L A DL MI+ G P++ T N++
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 465
Query: 227 IRGFCMAGKFDEACTMMKEMESR-----------GCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ G C GK +A M K M+ G P+ YN L+S L N GK EA
Sbjct: 466 LDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAE 525
Query: 276 EVIRHMVEKG 285
E+ + M +G
Sbjct: 526 ELYKEMPHRG 535
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 7/285 (2%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF L +C G V A +++R ++ L +P + +Y I+ + I +
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGL---QPNQITYGTIVDGMCKIGDTVSALNLL 236
Query: 69 QQMSDEGY-APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++M + + P+++ Y+ ++ ++ G+ H L EM G PD TYN ++
Sbjct: 237 RKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCS 296
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A LL M E +P+V+ ++ L++ + + +DEM +G +P+ +
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y MI + L+ A+ +F M TKG P+VFT+N++I G+C A + D+ ++ EM
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + YNTL+ G L A ++ + M+ G +V+
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 156/376 (41%), Gaps = 87/376 (23%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N +I C+ G A+++++ ++ K+ P +Y+A+++A +
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKI---NPNVVTYSALINAYVK 331
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLG-------------------- 94
R++ E +Y +M G P+ +TYN ++ C + RL
Sbjct: 332 ERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFT 391
Query: 95 ------------KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
++D LL EM +G D TYN L+H AAL+L M
Sbjct: 392 FNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMI 451
Query: 143 EVGFDPSVLHFTTLMDGLSRAG-----------------NLDACKYF------------- 172
G P ++ TL+DGL G +LDA + F
Sbjct: 452 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNIL 511
Query: 173 ----------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ EM ++G +P+ + Y+ MI L++A +FD M +K
Sbjct: 512 ISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSF 571
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+V T+N+++ G+C AG+ D+ + EM RG + + Y TL+ R G + A +
Sbjct: 572 SPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALD 631
Query: 277 VIRHMVEKGKYIHLVS 292
+ + M+ G Y ++
Sbjct: 632 IFQEMISSGVYPDTIT 647
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 42/288 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + +N ++ ++ + + L+ +YQ+M + D+ ++NI++
Sbjct: 66 SDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSC 125
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + GF PD T++ LLH L D+ AL+L + M P+V+ F
Sbjct: 126 SKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVVTF 181
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCM------------------------------- 182
TTLM+GL R G + D M G
Sbjct: 182 TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEE 241
Query: 183 -----PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P+VV Y+ +I G A +L+ M KG P++FTYN MI GFC +G++
Sbjct: 242 MSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWS 301
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA +++EM R NPN + Y+ L++ K EA E+ M+ +G
Sbjct: 302 EAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 126/288 (43%), Gaps = 17/288 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G TFN LI C + +++ ++ L +YN ++H
Sbjct: 380 MATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLV---ADTTTYNTLIHGFCL 436
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-------- 109
+ + QQM G PDI+T N ++ GKL + M +S
Sbjct: 437 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASR 496
Query: 110 ---GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TYNIL+ L K L A L M G P+ + ++++++GL + L
Sbjct: 497 PFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRL 556
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D FD M +K PDVV + +++ Y AG ++ +LF M +G + + TY ++
Sbjct: 557 DEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITL 616
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
I GF G + A + +EM S G P+ + ++++ L + +L A
Sbjct: 617 IHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRA 664
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 113/261 (43%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N LI C G++ A + ++ I S + P + N +L L
Sbjct: 415 MTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVC---PDIVTCNTLLDGLCD 471
Query: 58 IRQYKLIEWVYQQMSDE-----------GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ K +++ M G PD+ TYNI++ GK + L EM
Sbjct: 472 NGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEM 531
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ TY+ +++ L K + A + + M F P V+ F TL+ G +AG +
Sbjct: 532 PHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRV 591
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + D + Y +I + G + A D+F MI+ G P+ T SM
Sbjct: 592 DDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSM 651
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ + A M+++++
Sbjct: 652 LTVLWSKEELKRAVAMLEDLQ 672
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 4/182 (2%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L +M RS P +N L+ V+ + ++P ++L M+ V F L+
Sbjct: 64 LFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFC 123
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
L F ++ G PDVV ++ ++ + +A DLF M PNV
Sbjct: 124 SCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCR----PNVV 179
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+ +++ G C G+ EA ++ M G PN + Y T+V + G A ++R M
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239
Query: 282 VE 283
E
Sbjct: 240 EE 241
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%), Gaps = 6/153 (3%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M PSV+ F LM + R D + +M K DV + ++I
Sbjct: 61 AIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIK 120
Query: 194 SYIAAGELEKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + +L A F G ITK G P+V T+++++ G C+ + EA + +M C
Sbjct: 121 CFCSCSKLPFALSTF-GKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CR 175
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + + TL++ L G++ EA ++ MVE G
Sbjct: 176 PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG 208
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 139/279 (49%), Gaps = 12/279 (4%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFN------FRPFKNSYNAILHALLGIRQYKLIE 65
F+ LIC G KVVE KLFN F P + +Y A++ + + K
Sbjct: 252 AFSALICGLSGSG---KVVE---ADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAF 305
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+++ QM G P+++TY + + G+LD + LL EM R G + TYN +++ L
Sbjct: 306 FLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGL 365
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K L A+ L+ MKE G P + +TTLMD + G + + EM ++G P V
Sbjct: 366 CKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTV 425
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V + V++ +G+LE + L M+ KG +PN TYNS+++ +C+ + + +
Sbjct: 426 VTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRG 485
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M ++G P+ YN L+ A + EA + + MVEK
Sbjct: 486 MCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK 524
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 138/265 (52%), Gaps = 4/265 (1%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDI 80
VG +KVV+ + +L +P +Y++I+ LL + K++E V ++M G PD
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSII--LLLCKSGKVVEGEKVLREMMKRGVFPDH 215
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ Y ++ +LG ++L EM PD ++ L+ L K + A L N
Sbjct: 216 VIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNE 275
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M + GF+P + +T L+DG + G + + ++M G P+VV YT + +GE
Sbjct: 276 MIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGE 335
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L+ A +L M KG N+ TYN+++ G C AG +A +M+EM+ G +P+ + Y T
Sbjct: 336 LDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ G++ +A E++R M+++G
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRG 420
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 138/281 (49%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++NIL+ + +G R+ ++ + P SY I+ + + + +
Sbjct: 105 GVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKV 164
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++M +G P++ TY+ ++ + GK+ + ++L EM + G PD Y L+
Sbjct: 165 VQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDG 224
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K AA L + M+ P + F+ L+ GLS +G + F+EM KG PD
Sbjct: 225 FCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPD 284
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V YT +I Y GE++KA L + M+ G PNV TY ++ G C +G+ D A ++
Sbjct: 285 EVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLH 344
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM +G N YNT+V+ L AG + +A +++ M E G
Sbjct: 345 EMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 131/246 (53%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++++L + + + + +M +G PD+++Y ++ +G+L + +L+ EM
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ +TY+ ++ +L K K + +L M + G P + +TTL+DG + GN
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNT 231
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A F EM + +PD + ++ +I +G++ +A LF+ MI KG P+ TY ++
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I G+C G+ +A + +M G PN + Y L L +G+L A+E++ M KG
Sbjct: 292 IDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGL 351
Query: 287 YIHLVS 292
+++ +
Sbjct: 352 QLNIST 357
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 131/245 (53%), Gaps = 4/245 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +++A++ L G + + ++ +M +G+ PD +TY ++ +LG++ + L
Sbjct: 248 PDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFL 307
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++M + G +P+ TY L L K + A LL+ M G ++ + T+++GL +
Sbjct: 308 HNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK 367
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AGN+ +EM G PD + YT ++ +Y GE+ KA++L M+ +G P V T
Sbjct: 368 AGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVT 427
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN--LRNAGKLAEAHEVIRH 280
+N ++ G CM+GK ++ ++K M +G PN YN+++ +RN +++ E+ R
Sbjct: 428 FNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRIST--EIYRG 485
Query: 281 MVEKG 285
M +G
Sbjct: 486 MCAQG 490
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 98/198 (49%)
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
C + L ++ E + G + +YNIL++ L + K A +LL M+ G
Sbjct: 83 CLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI 142
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P V+ +TT++DG G L EM KG P++ Y+ +I +G++ + + +
Sbjct: 143 PDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKV 202
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
M+ +G P+ Y ++I GFC G A + EME+R P+ + ++ L+ L
Sbjct: 203 LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSG 262
Query: 268 AGKLAEAHEVIRHMVEKG 285
+GK+ EA ++ M++KG
Sbjct: 263 SGKVVEADKLFNEMIKKG 280
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 38/182 (20%)
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-------------CM------ 182
K+ G DP V F L AG L+ + FFD++ N G C+
Sbjct: 33 KDWGSDPHV--FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDM 90
Query: 183 -----------PDV-VC-----YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
P + VC Y +++ S G++ +A L M KG +P+V +Y +
Sbjct: 91 LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTT 150
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G+C G+ + ++KEM+ +G PN Y++++ L +GK+ E +V+R M+++G
Sbjct: 151 IIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG 210
Query: 286 KY 287
+
Sbjct: 211 VF 212
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILICTCGEVGL--ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
G+ + +N ++ + L AR+++ ++ P +YN ++ AL Q +
Sbjct: 115 GYAPSLLAYNAVLLALSDASLPSARRLLASMLRD---GVAPNVYTYNILVRALCARGQRE 171
Query: 63 -LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V M G AP+++TYN ++ A R G++D RL+ M G P T+N +
Sbjct: 172 EALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTV 231
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ L K + A + + M G P + + TL+ G +AG L F EMA KG
Sbjct: 232 VNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGV 291
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+PDVV +T +I + AG LE+A L M +G N FT+ ++I GFC G D+A
Sbjct: 292 VPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALL 351
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
MKEM P+ + YN L++ G++ EA E+I M KG
Sbjct: 352 AMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 139/277 (50%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L+ C GEV A ++V + RP ++N +++ L + + ++
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREG---GVRPSLVTFNTVVNGLCKAGRMEDARKMF 248
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M+ EG PD ++YN ++ + G L + + EM + G PD T+ L+H + +
Sbjct: 249 DEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRA 308
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A+ L+ M+E G + FT L+DG R G LD EM P VVCY
Sbjct: 309 GNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCY 368
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+I Y G +++A++L M KG P+V TY++++ G+C G D A + ++M
Sbjct: 369 NVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLK 428
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ + Y++L+ L +L +A E+ M++ G
Sbjct: 429 KGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLG 465
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 141/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G + TFN ++ C G + ARK+ + + L P SYN ++
Sbjct: 216 MREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGL---TPDGVSYNTLVSGYCK 272
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
V+ +M+ +G PD++T+ ++ A R G L++ L+ +M G + T
Sbjct: 273 AGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFT 332
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ + AL + M+E PSV+ + L++G + G +D + EM
Sbjct: 333 FTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEME 392
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PDVV Y+ +++ Y G+ + A +L M+ KG +P+ TY+S+IRG C +
Sbjct: 393 AKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLG 452
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+AC + ++M G P+ Y TL+ G + +A + M++KG +V+
Sbjct: 453 DACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVT 507
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 94/184 (51%), Gaps = 2/184 (1%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL-SRAGNLDA 168
G++P YN +L L P +A LL M G P+V + L+ L +R +A
Sbjct: 115 GYAPSLLAYNAVLLALSDASLP-SARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
D+M GC P+VV Y ++ ++ AGE++ A+ L M G P++ T+N+++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
G C AG+ ++A M EM G P+ + YNTLVS AG L EA V M +KG
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293
Query: 289 HLVS 292
+V+
Sbjct: 294 DVVT 297
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 128/279 (45%), Gaps = 22/279 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSY--NAI 51
M + G TF LI C G V L ++ ER ++ F F + + N
Sbjct: 286 MAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGF 345
Query: 52 LH-ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
L ALL +++ M + P ++ YN+++ +LG++D+ L+ EM G
Sbjct: 346 LDDALLAMKE----------MRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKG 395
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DAC 169
PD TY+ +L K +A L M + G P + +++L+ GL L DAC
Sbjct: 396 MKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDAC 455
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ F++M G PD YT +I + G ++KA L D MI KG LP+V TY+ +I G
Sbjct: 456 E-LFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ + EA ++ ++ P+ + Y L+ R A
Sbjct: 515 LSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTA 553
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 127/300 (42%), Gaps = 15/300 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TF LI G + + + +P YN +++ + +
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M +G PD++TY+ ++ ++G D L +M + G PD TY+
Sbjct: 381 MDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSS 440
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A L M ++G P +TTL+DG + GN+ DEM KG
Sbjct: 441 LIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG 500
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM-------------- 226
+PDVV Y+V+I + ++AQ L + + +P+ Y ++
Sbjct: 501 VLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVA 560
Query: 227 -IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++GF M G ++A + + M R + VY+ L+ G + +A + ++ G
Sbjct: 561 LLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCG 620
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G +A +N LI C G + +A + +K + P ++YN+++HAL
Sbjct: 317 MVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI---SPTMSTYNSLIHALFM 373
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E + +++ ++G +PD +TYNI++ R + L DEM SG P T
Sbjct: 374 EQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKT 433
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LLHVL K ++ A +L + G P + F L+DG N+ +M
Sbjct: 434 YTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMD 493
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD V + ++ + G++E+A++LFD M +G P+ ++N++I G+ G
Sbjct: 494 RMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIK 553
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEKG 285
+A + EM G NP L YN LV L G LAE E+++ MV KG
Sbjct: 554 DAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAE--ELLKEMVSKG 601
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 10/304 (3%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF ++ F+ LI +C ++ A + E F K P + N++L L + + +
Sbjct: 147 GFKSSI-VFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y +M + T+NI++ + GKL + + M SG P+ TYN ++H
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ AA +L MK +P + +L+ G+ + G L+ F+EM KG P
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y +I + G L+ A D M+ KG P + TYNS+I M + DEA M+K
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIK 385
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG---------KYIHLVSKFK 295
E++ +G +P+ + YN L++ +A + M+ G +H++SK
Sbjct: 386 EIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKN 445
Query: 296 RYKR 299
R K
Sbjct: 446 RMKE 449
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + A K+ E ++ L RP YN ++ + +M +G
Sbjct: 301 MCKQGRLEEASKIFEEMVQKGL---RPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGI 357
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P + TYN ++ A + + D+ ++ E+ G SPD TYNIL++ + A
Sbjct: 358 SPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFL 417
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P+ +T+L+ LS+ + F ++ ++G +PD + + +I +
Sbjct: 418 LHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHC 477
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+ ++ A +L M P+ T+N++++G C GK +EA + EM+ RG P+ +
Sbjct: 478 SNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHI 537
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+NTL+S G + +A V M++ G
Sbjct: 538 SFNTLISGYSRRGDIKDAFRVRNEMLDTG 566
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+N ++ C+ G V A ++ + K+ P +Y +++ +
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKI---EPDSFTYGSLISGMCK 303
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++++M +G P + YN ++ G LD DEM + G SP T
Sbjct: 304 QGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L + A ++ ++E G P + + L++G R N DEM
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P YT ++ +++A DLF + ++G LP+ +N++I G C
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVK 483
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++K+M+ P+ + +NT++ GK+ EA E+ M +G
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRG 531
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNS---YNAILHALLG 57
M E G T T N L+ + L R + +++F R K+S +N +++ L
Sbjct: 177 MKEKGVLPTIETCNSLLSLF--LKLNRTEAAWVLYAEMFRLR-IKSSVYTFNIMINVLCK 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + M G P+I+TYN ++ G+++ +L M R PD T
Sbjct: 234 EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + K + A + M + G PS + + TL+DG GNLD + DEM
Sbjct: 294 YGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEML 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P + Y +I + ++A+ + + KG P+ TYN +I G+C
Sbjct: 354 KKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAK 413
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + EM + G P Y +L+ L ++ EA ++ + + +G
Sbjct: 414 KAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E G A T+NILI C C A + + + S + +P K +Y ++LH L
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGI---KPTKKTYTSLLHVLSKKN 445
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ K + ++++++ EG PD + +N ++ + LL +M R PD T+N
Sbjct: 446 RMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFN 505
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ + K A L + MK G P + F TL+ G SR G++ +EM +
Sbjct: 506 TIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDT 565
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G P V+ Y ++ E + A++L M++KG P+ TY ++I G DE
Sbjct: 566 GFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+ G A FN LI C+ V A ++++ + K+ P + ++N I+
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV---PPDEVTFNTIMQGHCR 513
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M G PD +++N ++ R G + R+ +EM +GF+P T
Sbjct: 514 EGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLT 573
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
YN L+ L K + A LL M G P + TL++G+++ D K
Sbjct: 574 YNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 142/290 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI + G + V K + + +P YN I+++L +
Sbjct: 153 LVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKL 212
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
VY +M +G +PD++TY ++ +G L + LL+EM +P+ T+NI
Sbjct: 213 LGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNI 272
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A LL M + P V + +L+DG + KY F MA +G
Sbjct: 273 LIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRG 332
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV CYT MI +++A LF+ M K +P++ TYNS+I G C + A
Sbjct: 333 VTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAI 392
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ K M+ +G P+ Y L+ L +G+L +A E+ + ++ KG ++++
Sbjct: 393 ALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNV 442
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G T+ LI +G ++ + KL N P ++N ++ AL +
Sbjct: 223 MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGK 282
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + M PD+ TYN ++ + + ++ + M + G +PD Y
Sbjct: 283 MKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTN 342
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K A++L MK P ++ + +L+DGL + +L+ M +G
Sbjct: 343 MINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQG 402
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV YT+++ +G LE A+++F ++ KG NV Y +I C AG FDEA
Sbjct: 403 IQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEAL 462
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +ME +GC P+ + ++ ++ L + +A +++R M+ +G
Sbjct: 463 DLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARG 507
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N IL +L+ + Y + +++Q G PD+ T +I++ + + +
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ GF P+ T N L+ L + AL + + GF + + TL++GL + G
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A ++ PDVV Y +I S L A D++ MI KG P+V TY ++I
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLI 239
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
GFC+ G EA +++ EM+ + NPN +N L+ L GK+ EA ++ M++
Sbjct: 240 HGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMK 295
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 129/292 (44%), Gaps = 6/292 (2%)
Query: 4 NGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T +ILI C C + LA V +K F P + N ++ L +
Sbjct: 86 NGITPDLCTLSILINCFCHQAHITLAFSVFANILKR---GFHPNAITLNTLIKGLCFRGE 142
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + Q+ +G+ D ++Y ++ + G+ RLL ++ PD YN
Sbjct: 143 IKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 202
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K A ++ + M G P V+ +TTL+ G G+L +EM K
Sbjct: 203 IINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN 262
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V + ++I + G++++A+ L M+ P+VFTYNS+I G+ + + A
Sbjct: 263 INPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAK 322
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M RG P+ Y +++ L + EA + M K +V+
Sbjct: 323 YVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVT 374
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 41/244 (16%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI G++ A+ ++ +K+ + +P +YN+++ + + K ++V+
Sbjct: 269 TFNILIDALSKEGKMKEAKILLAVMMKACI---KPDVFTYNSLIDGYFLVDEVKHAKYVF 325
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+ G PD+ Y ++ + +D+ L +EM PD TYN L+ L K
Sbjct: 326 YSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKN 385
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY----------------- 171
A+ L MKE G P V +T L+DGL ++G L+ K
Sbjct: 386 HHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAY 445
Query: 172 -----------FFDE-------MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
FFDE M +KGCMPD V + ++I + E +KA+ + MI
Sbjct: 446 TVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIA 505
Query: 214 KGQL 217
+G L
Sbjct: 506 RGLL 509
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 79/173 (45%), Gaps = 1/173 (0%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P FH NIL ++ P ++L + G P + + L++ ++
Sbjct: 56 PTFHFNNILSSLVNNKHYP-TVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F + +G P+ + +I GE++KA D ++ +G + +Y ++I G C
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ +++++E P+ ++YNT++++L L +A +V M+ KG
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG 227
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 67/150 (44%), Gaps = 3/150 (2%)
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+A+ NL+ M+ P HF ++ L + F + G PD+ +++
Sbjct: 42 VASFNLMLLMRP---PPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSIL 98
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + + A +F ++ +G PN T N++I+G C G+ +A ++ ++G
Sbjct: 99 INCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGF 158
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + Y TL++ L G+ ++R +
Sbjct: 159 QLDQVSYGTLINGLCKTGETKAVARLLRKL 188
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 141/292 (48%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TFN LI V L ++V+R + L +Y A+++
Sbjct: 176 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-------TYGAVVN 228
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + ++M D++ YN ++ + +D L ++M G P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TYN L+ L + A LL++M E +P+V+ F+ L+D + G L + +
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DEM + PD+ Y+ +I + L++A+ +F+ MI+K PNV TYN++I+GFC A
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E + +EM RG N + YNTL+ L AG A ++ + MV G
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 156/313 (49%), Gaps = 43/313 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++NILI C ++ LA V+ + +K + P + +++L+ ++ +
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMK---LGYEPDIVTLSSLLNGYCHSKRISDAVALV 173
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK- 127
QM + GY PD +T+N ++ + K + L+D+M + G PD TY +++ L K
Sbjct: 174 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD--- 184
GD L AL+LL M++ + V+ + T++DGL + ++D F++M KG PD
Sbjct: 234 GDIDL-ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFT 292
Query: 185 --------------------------------VVCYTVMITSYIAAGELEKAQDLFDGMI 212
VV ++ +I +++ G+L +A+ L+D MI
Sbjct: 293 YNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ P++FTY+S+I GFCM + DEA M + M S+ C PN + YNTL+ A ++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 273 EAHEVIRHMVEKG 285
E E+ R M ++G
Sbjct: 413 EGMELFREMSQRG 425
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 142/287 (49%), Gaps = 12/287 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ ++ C G++ LA ++++ K K+ YN I+ G
Sbjct: 211 MVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKI---EADVVIYNTIID---G 264
Query: 58 IRQYKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +YK I+ ++ +M +G PD+ TYN ++ G+ RLL M +P+
Sbjct: 265 LCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPN 324
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T++ L+ K K + A L + M + DP + +++L++G LD K+ F+
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M +K C P+VV Y +I + A +E+ +LF M +G + N TYN++I+G AG
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
D A + K+M S G P+ + Y+ L+ L GKL +A V ++
Sbjct: 445 DCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 491
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G A +++ I+ K+ P +++A++ A
Sbjct: 281 METKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKI---NPNVVTFSALIDAF-- 335
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++ KL+E +Y +M PDI TY+ ++ +LD+ + + M P+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + + L M + G + + + TL+ GL +AG+ D + F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PD++ Y++++ G+LEKA +F+ + P+++TYN MI G C AGK
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + + +G PN ++Y T++S G EA + R M E G
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 132/251 (52%), Gaps = 4/251 (1%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + +N +L A+ ++++ L+ + ++M + + D+ +YNI++ R
Sbjct: 70 EMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRS 129
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+L +L +M + G+ PD T + LL+ + A+ L++ M E+G+ P + F
Sbjct: 130 QLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFN 189
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
TL+ GL D+M +GC PD+V Y ++ G+++ A L M K
Sbjct: 190 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKM-EK 248
Query: 215 GQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G++ +V YN++I G C D+A + +ME++G P+ YN+L+S L N G+ ++
Sbjct: 249 GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSD 308
Query: 274 AHEVIRHMVEK 284
A ++ +M+E+
Sbjct: 309 ASRLLSNMIER 319
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + IK + P +Y+++++
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 372
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + P+++TYN ++ + ++++ L EM + G + T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + A + M G P ++ ++ L+DGL + G L+ F+ +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ Y +MI AG++E DLF + KG PNV Y +MI GFC G +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + +EM+ G P+ YNTL+ + LR+ K A A E+I+ M
Sbjct: 553 EADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA-ELIKEM 596
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T++ LI C + A+ + E I F P +YN ++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCK 407
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G + +TYN ++ ++ G D ++ +M G PD T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K K AL + ++++ +P + + +++G+ +AG ++ F ++
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ YT MI+ + G E+A LF M G LP+ YN++IR G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 587
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ ++KEM S G + ++V N+ + G+L +++
Sbjct: 588 ASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSY 624
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 1/192 (0%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
KLD L EM +S P +N LL + K K ++L M+ + + +
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L++ R L +M G PD+V + ++ Y + + A L D M+
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+ T+N++I G + K EA ++ +M RGC P+ + Y +V+ L G + A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 275 HEVIRHMVEKGK 286
+++ M EKGK
Sbjct: 240 LSLLKKM-EKGK 250
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 76/159 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ L M + PS++ F L+ +++ D + M N D+ Y ++I
Sbjct: 64 AIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ +L A + M+ G P++ T +S++ G+C + + +A ++ +M G P
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 183
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + +NTL+ L K +EA ++ MV++G LV+
Sbjct: 184 DTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 222
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M+ +G P T++IL+ C G++ A V E KSK+ P +YN ++
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM---EPDIYTYNIMIEGMCK 512
Query: 54 --------------ALLGIRQYKLI-----------------EWVYQQMSDEGYAPDILT 82
+L G++ +I + ++++M ++G PD
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 572
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
YN ++ A+ R G L+ EM GF D T ++++++L G + L +L+
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 149/323 (46%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G +RTF +LI C +G A ++++ K N P SY A+++ L
Sbjct: 305 MITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR---NLVPSAVSYGAMINGLCH 361
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L + ++M+ G P+++ Y+ ++ G++++ RLLD M SG +PD
Sbjct: 362 CKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFC 421
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K K A L ++ G P + F + G S+ G + +FDEM
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481
Query: 178 NKGCMPDVVCYTVMITSYIAAGEL-----------------------------------E 202
+ G MP+ YTV+I + AG L +
Sbjct: 482 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQ 541
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A +F + KG +P+VFTY+S+I GFC G+ ++A + EM +G PN +YN LV
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALV 601
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L +G + A ++ M EKG
Sbjct: 602 DGLCKSGDIQRARKLFDGMPEKG 624
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 113/218 (51%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M D G P+ Y +++ ++ G L + + + G PD T + +H L K
Sbjct: 477 FDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLK 536
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ AL + + +KE G P V +++L+ G + G ++ DEM KG P++
Sbjct: 537 NGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFI 596
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ +G++++A+ LFDGM KG P+ TY++MI G+C + EA ++ EM
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S+G P+ VYN LV G + +A + R M++KG
Sbjct: 657 SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG 694
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 143/292 (48%), Gaps = 1/292 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G + +LI + G + + F P + +A +H LL +
Sbjct: 480 MLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGR 539
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ ++ ++G PD+ TY+ ++ + G++++ L DEM G +P+ YN
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A L + M E G +P + ++T++DG ++ N+ F EM +KG
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P Y ++ G++EKA +LF M+ KG ++N++I G+C + K EA
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKIQEAS 718
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM ++ P+ + Y T++ AGK+ EA+ + + M E+ + V+
Sbjct: 719 QLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT 770
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 123/278 (44%), Gaps = 35/278 (12%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y I L ++ + +++M G PD + ++ R G +D+ R+
Sbjct: 207 PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRI 266
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGK-----------------GDKPLA------------ 133
D M G + TYN+L+H L K G KP +
Sbjct: 267 KDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326
Query: 134 ------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL LL+ M++ PS + + +++GL +L ++M G P+VV
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ +I Y + G +E+A+ L DGM G P++F YN++I AGK +EA T + E++
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG P+ + + + GK+ EA + M++ G
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHG 484
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 1/283 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G T++ LI + G K E + L P YNA++ L +
Sbjct: 552 EKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQ 611
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++ M ++G PD +TY+ ++ + + + L EM G P YN L+
Sbjct: 612 RARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H K A+NL M + GF + L F TL+DG ++ + F EM K M
Sbjct: 672 HGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD V YT +I + AG++E+A LF M + + + TY S++ G+ G+ E +
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++M ++G P+ + Y ++ L EA ++ +V KG
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 833
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 135/303 (44%), Gaps = 44/303 (14%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQ 60
G P +F+IL +C GLA V+ + I++ P+ +S +IL ++L R
Sbjct: 99 GVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRT------PYSSS--SILDSVLFWFRN 150
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL------------------ 102
Y G +P + ++I++ + R+G LD+ +
Sbjct: 151 YG------------GSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNS 196
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L MG G P+ +TY I+ L + + A M++ G P + L+DG R
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G++D D M + G +++ Y V+I G++EKA ++ GMIT G PN T
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ +I G+C A ++ EME R P+ + Y +++ L + L+ A++++ M
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376
Query: 283 EKG 285
G
Sbjct: 377 FSG 379
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 7/280 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G + T++ +I C V A + + SK +P YNA++H
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE-MPSK--GVQPHSFVYNALVHGCCK 676
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G+A L++N ++ + K+ + +L EM PD T
Sbjct: 677 EGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVT 735
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ K K A L M+E + +T+LM G ++ G F++M
Sbjct: 736 YTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMV 795
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD V Y ++I ++ L +A L D ++ KG L ++ +I C
Sbjct: 796 AKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLT 855
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
EA ++ EM G P+ +TLV + AGK+ EA V
Sbjct: 856 EASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 118/282 (41%), Gaps = 1/282 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G + +N L+ C + G K + F + L S+N ++ +
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLF-REMLQKGFATTLSFNTLIDGYCKSCK 713
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++Q+M + PD +TY V+ + GK+++ + L EM D TY
Sbjct: 714 IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTS 773
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K + L M G P + + ++ + NL DE+ KG
Sbjct: 774 LMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKG 833
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + ++IT+ +L +A L D M G P++ ++++R F AGK DEA
Sbjct: 834 MLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEAT 893
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ + ++S G P+ LV+ N +A +I+ +V
Sbjct: 894 RVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 22/150 (14%)
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF------------ 208
S + LD+ ++F G P V + ++I SY G L++A ++F
Sbjct: 136 SSSSILDSVLFWFRNYG--GSSP--VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISL 191
Query: 209 ------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
M KG +PN +TY + G C A + +EA +EM+ G P++ + L+
Sbjct: 192 IRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 251
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + E + MV G I+L++
Sbjct: 252 DGFMREGDIDEVLRIKDVMVSCGIPINLIT 281
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 140/292 (47%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TFN LI V L ++V R + LF +Y +++
Sbjct: 177 MVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-------TYGTVVN 229
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + ++M +++ YN ++ + +D L ++M G P
Sbjct: 230 GLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKP 289
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TYN L+ L + A LL+ M E +P+V+ F +L+D ++ G L + F
Sbjct: 290 DVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 349
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DEM + P++V Y +I + L++AQ +F M++K LP+V TYN++I+GFC A
Sbjct: 350 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKA 409
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E + +EM RG N + YNTL+ L AG A ++ + MV G
Sbjct: 410 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 131/265 (49%), Gaps = 3/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ LA ++++ K K+ YN I+ L + ++ +M +G
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKI---EANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD+ TYN ++ G+ RLL +M +P+ T+N L+ K K + A
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M + DP+++ + +L++G LD + F M +K C+PDVV Y +I +
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A +E+ +LF M +G + N TYN++I+G AG D A + K+M S G P+ +
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y+ L+ L GKL +A V ++
Sbjct: 468 TYSILLDGLCKYGKLEKALVVFEYL 492
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T++IL+ C ++ LA V+ + +K + P + +++L+ ++
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMK---LGYEPDIVTLSSLLNGYCHGKRI 167
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM + GY PD +T+N ++ + K + L+D M G PD TY +
Sbjct: 168 SEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 227
Query: 122 LHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K GD L AL+LL M++ + +V+ + T++DGL + ++D F++M KG
Sbjct: 228 VNGLCKRGDIDL-ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
PDV Y +I+ ++ G+L +A+
Sbjct: 287 IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAE 346
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD MI + PN+ TYNS+I GFCM + DEA + M S+ C P+ + YNTL+
Sbjct: 347 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGF 406
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
A ++ E E+ R M ++G
Sbjct: 407 CKAKRVEEGMELFREMSQRG 426
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G A +++ I+ K+ P ++N+++ A
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKI---NPNVVTFNSLIDAF-- 336
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ KLIE ++ +M P+I+TYN ++ +LD+ ++ M PD
Sbjct: 337 AKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 396
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + + L M + G + + + TL+ GL +AG+ D + F +
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PD++ Y++++ G+LEKA +F+ + PN++TYN MI G C AGK
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + + +G PN ++Y T++S G EA + R M E G
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 566
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TFN LI G++ A K+ + I+ + P +YN++++
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI---DPNIVTYNSLINGFCM 373
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ M + PD++TYN ++ + ++++ L EM + G + T
Sbjct: 374 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 433
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + A + M G P ++ ++ L+DGL + G L+ F+ +
Sbjct: 434 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 493
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P++ Y +MI AG++E DLF + KG PNV Y +MI GFC G +
Sbjct: 494 KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 553
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + +EM+ G P+ YNTL+ + LR+ K A A E+I+ M
Sbjct: 554 EADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASA-ELIKEM 597
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 115/231 (49%), Gaps = 2/231 (0%)
Query: 57 GIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
G+ + KL + V + +M P I+ ++ ++ A ++ K D L ++M G +
Sbjct: 56 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 115
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY+ILL+ + + AL +L M ++G++P ++ ++L++G + D
Sbjct: 116 HYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVD 175
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M G PD V + +I + +A L D M+ +G P++FTY +++ G C G
Sbjct: 176 QMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 235
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A +++K+ME N ++YNT++ L + +A ++ M KG
Sbjct: 236 DIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 286
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 134/278 (48%), Gaps = 7/278 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T+N LI C + A+++ + P +YN ++
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL---PDVVTYNTLIKGFCK 408
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G + +TYN ++ ++ G D ++ +M G PD T
Sbjct: 409 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 468
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K K AL + ++++ +P++ + +++G+ +AG ++ F ++
Sbjct: 469 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ YT MI+ + G E+A LF M G LP+ YN++IR G
Sbjct: 529 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKA 588
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ ++KEM S G + ++V N+ + G+L +++
Sbjct: 589 ASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSY 625
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M+ +G P T++IL+ C G++ A V E KSK+ P +YN ++
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM---EPNIYTYNIMIEGMCK 513
Query: 54 --------------ALLGIRQYKLI-----------------EWVYQQMSDEGYAPDILT 82
+L G++ +I + ++++M ++G PD
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 573
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
YN ++ A+ R G L+ EM GF D T ++++++L G + L +L+
Sbjct: 574 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 630
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 139/305 (45%), Gaps = 27/305 (8%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNS--YNAILHALLGIRQYKL 63
P T RTF IL + R S + R ++ +N++L AL R
Sbjct: 129 LPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASK 188
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + + + + PD++TYN + R+ + LL +M SG +P TYN++L
Sbjct: 189 AASLVRAL-ERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILK 247
Query: 124 VLGKGDKPLAALNLLNHMKEVGFD-----PSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + A N MK+ G P V+ +TT++ GL AG LD + FDEM+
Sbjct: 248 GFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSK 307
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+GC P + Y +I G +E A +FD MI K +PNV TY +IRG C GK D
Sbjct: 308 EGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDR 367
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG---KYIHLVSKFK 295
A +M+ M++ GC P YN L IR+ E+G K +HL +
Sbjct: 368 AMKLMERMKNEGCEPVVQTYNVL----------------IRYSFEEGEMDKALHLFERMS 411
Query: 296 RYKRC 300
+ + C
Sbjct: 412 KGEEC 416
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 114/246 (46%), Gaps = 15/246 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-----SKLFNFRPFKNSYNAILHAL 55
M E+G T T+N+++ G + F++ SK N +P SY I+H L
Sbjct: 230 MAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGL 289
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Q ++ +MS EG P I TYN ++ + G ++ + D+M R + P+
Sbjct: 290 GVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNV 349
Query: 116 HTYNILLHVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
TY +L+ L GK D+ A+ L+ MK G +P V + L+ G +D +
Sbjct: 350 VTYTVLIRGLCHVGKIDR---AMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHL 406
Query: 173 FDEMAN-KGCMPDVVCYTVMITSYIA---AGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
F+ M+ + C+P+ Y ++I++ A ++ A + M+ +G LP F N ++
Sbjct: 407 FERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVERGYLPRRFMLNRVLN 466
Query: 229 GFCMAG 234
G + G
Sbjct: 467 GLMLTG 472
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 149/305 (48%), Gaps = 20/305 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T++ LI VG + ++ F K L N +P ++N ++ R+
Sbjct: 221 MVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 280
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V+ M +G PD++TYN +M + +++ + + M + G +PD +YNI
Sbjct: 281 MKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNI 340
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K K A+NL N M P+V+ + +L+DGLS++G + D+M ++G
Sbjct: 341 LINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 400
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF------------------- 221
P+++ Y +I + +++KA L +G P+++
Sbjct: 401 VPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITV 460
Query: 222 -TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN MI GFC G FDEA +++ +M+ C PN + Y + +L + + +A ++ R
Sbjct: 461 NTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFRE 520
Query: 281 MVEKG 285
M+ +G
Sbjct: 521 MITRG 525
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ LI C GE A +++R + KL YN +++ +
Sbjct: 151 LVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQR-VDGKLVQLNAVM--YNTVIYGMCK 207
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M +G +P+++TY+ ++ + +GKL L +++ PD +T
Sbjct: 208 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYT 267
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ K K + M + G P V+ + +LMDG ++ K F+ MA
Sbjct: 268 FNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMA 327
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD+ Y ++I + +++KA +LF+ M K +PNV TYNS+I G +G+
Sbjct: 328 QGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRIS 387
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ +M RG PN L YN+++ L ++ +A +I ++G
Sbjct: 388 YALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQG 435
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 140/285 (49%), Gaps = 11/285 (3%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
+ +T+ TF+ + +V A + R ++ N P +N IL +L+ + Y +
Sbjct: 53 SYSSTSTTFH----SNNDVDDAVSLFNRLLRQ---NPTPPAFEFNKILGSLVKSKHYHTV 105
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD-QFHRLL---DEMGRSGFSPDFHTYNI 120
+ Q+M G P++ NI++ +LG + Q H+ D++ GF D +Y
Sbjct: 106 LSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGT 165
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H L K + AAL+LL + + + + T++ G+ + +++ + EM +KG
Sbjct: 166 LIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKG 225
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y+ +I+ + G+L+ A DLF+ +I + P+ +T+N ++ GFC K E
Sbjct: 226 ISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGK 285
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
T+ M +G P+ + YN+L+ ++ A + M + G
Sbjct: 286 TVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGG 330
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 32/275 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N L+ C EV A+ + + + P SYN +++
Sbjct: 291 MMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGV---NPDIRSYNILINGFCK 347
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ ++ +M + P+++TYN ++ + G++ +L+D+M G P+ T
Sbjct: 348 IKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILT 407
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC-------- 169
YN ++ L K + A+ L+ K+ G PS+ +T L+DGL + D
Sbjct: 408 YNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMI 467
Query: 170 -----KYFFDE-------MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
K FDE M + C+P+ V Y + I S + E +KA+ LF MIT+G L
Sbjct: 468 HGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFREMITRGLL 527
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+Y C + K ++ TM++ C+
Sbjct: 528 NRSASYP------CSSMKIHQSLTMVQHTWCDSCS 556
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/77 (20%), Positives = 38/77 (49%)
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y+ T++ + +++ A LF+ ++ + P F +N ++ + + ++ ++
Sbjct: 52 ISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQK 111
Query: 246 MESRGCNPNFLVYNTLV 262
ME RG PN N L+
Sbjct: 112 MEFRGIKPNLFNCNILI 128
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 145/300 (48%), Gaps = 8/300 (2%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T + +I G + K V F + K+ +P +YN+++ L+ QY+ + +
Sbjct: 153 VTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHEL 212
Query: 68 YQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +MS+EG+ PD +TY+ ++ A +LG+ D RLL+EM +G P Y +L+ +
Sbjct: 213 YNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFF 272
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + AL L M+ P V +T L+ GL +AG D FF EM +GC PD V
Sbjct: 273 KLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTV 332
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKE 245
MI AG L+ A LF+ M T +P+V TYN++I+ F + E + +
Sbjct: 333 VINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFER 392
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
M+ G +P+ Y+ L+ + +A ++ M EKG Y L+ + KR
Sbjct: 393 MKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 452
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRL-GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++++M P ++TYN ++ A + ++ + + M SG SP TY+IL+
Sbjct: 353 LFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGF 412
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ++ A+ LL M E GF P + +L+D L +A D F E+
Sbjct: 413 CKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSA 472
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y VMI AG L+ A +LFD M G PNV+ YN+++ G AG DEA T M+
Sbjct: 473 RVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRR 532
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ GC P+ YN +++ L G A E++ +M +
Sbjct: 533 MQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSA 572
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 127/277 (45%), Gaps = 4/277 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLI 64
P T N +I G+ G V+ F + P +YN I+ AL R ++
Sbjct: 329 PDTV-VINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEIS 387
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
W +++M G +P TY+I++ + + ++ LL+EM GF P Y L+
Sbjct: 388 SW-FERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDA 446
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
LGK + A L +KE S + ++ L +AG LD FDEM GC P+
Sbjct: 447 LGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPN 506
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y +++ AG L++A M G +P++ +YN ++ G G A M+
Sbjct: 507 VYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLS 566
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
M+ P+ + YNT++ + +AG EA ++++ M
Sbjct: 567 NMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEM 603
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 127/293 (43%), Gaps = 15/293 (5%)
Query: 1 MIENGFPTTARTFNILIC-------TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M +NG TA+ + +LI G +GL ++ ++ + +F +Y ++
Sbjct: 252 MKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVF-------TYTELIR 304
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L ++ + +M EG PD + N ++ + G+LD +L +EMG P
Sbjct: 305 GLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIP 364
Query: 114 DFHTYNILLHVLGKGDKPLAALN-LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
TYN ++ L + ++ ++ MK G PS ++ L+DG + +
Sbjct: 365 SVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMML 424
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+EM KG P Y +I + A + A +LF + + Y MI+
Sbjct: 425 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGK 484
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG+ D+A + EM GC PN YN L+S L AG L EA +R M E G
Sbjct: 485 AGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHG 537
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 72/160 (45%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G+ G V F + P +YNA++ L
Sbjct: 465 ENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLD 524
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++M + G PDI +YNI++ + G + +L M +S PD +YN +L
Sbjct: 525 EALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVL 584
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ A L+ M +GF+ ++ ++++++ + +
Sbjct: 585 GAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N L+ G+ + + + + P NSYN IL+ L + M
Sbjct: 509 AYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNM 568
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
PD ++YN V+ A G ++ +L+ EM GF D TY+ +L +GK D
Sbjct: 569 KQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKVD 626
>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 536
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 1/277 (0%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+TFNILI VG A K VE F P +YN ++ + K ++
Sbjct: 206 TKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFD 265
Query: 70 QM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ S G +PD++TY ++ + GK+ + LLD+M R G P T+N+L+ K
Sbjct: 266 DVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + M G P V+ FT+L+DG R G ++ ++EM +G P+ Y
Sbjct: 326 GEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTY 385
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I + L KA++L + +K +P F YN +I GFC AGK +EA +++EME
Sbjct: 386 SILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEK 445
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C P+ + + L+ G++ EA + MV G
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 1/208 (0%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ N ++ +L +++ +L +E R D T+NIL+ L K A+ LL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGG 231
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM-ANKGCMPDVVCYTVMITSYIAAG 199
M G P ++ + TL+ G ++ L FD++ ++ GC PDVV YT MI+ Y AG
Sbjct: 232 MSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAG 291
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
++++A L D M+ G P T+N ++ G+ AG+ A + +M S GC P+ + +
Sbjct: 292 KMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFT 351
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+L+ G++ + + M +G +
Sbjct: 352 SLIDGYCRVGQVNQGFRLWEEMNARGMF 379
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 3/255 (1%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
N R +YN + +L + L +++ M +G +P+ ++ + GKL
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHC 156
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
LL + N LL+ L K D+ A+ L F L+
Sbjct: 157 ATALL--LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIR 214
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM-ITKGQL 217
GL G + M+ GC+PD+V Y +I + + EL+KA ++FD + + G
Sbjct: 215 GLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCS 274
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+V TY SMI G+C AGK EA ++ +M G P + +N LV AG++ A E+
Sbjct: 275 PDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEI 334
Query: 278 IRHMVEKGKYIHLVS 292
M+ G + +V+
Sbjct: 335 RGKMISFGCFPDVVT 349
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 108/222 (48%), Gaps = 3/222 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A +++ ++ ++ P ++N ++ + E + +M G
Sbjct: 288 CKAGKMQEASVLLDDMLRLGIY---PTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCF 344
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++T+ ++ R+G+++Q RL +EM G P+ TY+IL++ L K ++ L A L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKAREL 404
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + P + ++DG +AG ++ +EM K C PD + +T++I +
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G + +A +F M+ G P+ T +S++ AG EA
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 17/284 (5%)
Query: 12 TFNILI---CTCGEVGLARKVV----ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
T+N LI C+ G ARK++ ++ I + +F +Y++I+ +L+ + +
Sbjct: 83 TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVF-------TYSSIIKSLVKEAKPEES 135
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V ++M G PD+ +N VM R +++ + M SG+ PD +Y+IL+H
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195
Query: 125 LGKGDKPLAALNLLNHM--KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K K +L +L+ M + G+ P+V+ F+TL+ GL R G L+ F M GC
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ YT +I A ++ +A++LF+ M P+ YNS+I G+C G DEA +
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315
Query: 243 MKEME-SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM G P + +NTL+ GKL A+E++ M KG
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKG 359
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 3/249 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ + VYQ M + GY PD ++Y+I++ ++GKLD+ ++L EM
Sbjct: 153 AFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM 212
Query: 107 G--RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+G+ P+ T++ L+H L + + AL + M E G P+ +TTL+ GL RA
Sbjct: 213 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAE 272
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTY 223
+ + F++M PD V Y +I Y G +++A+ L+ M L P + T+
Sbjct: 273 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 332
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I GFC GK A ++ EM ++G + Y L++ L A KL EA EV + M E
Sbjct: 333 NTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMRE 392
Query: 284 KGKYIHLVS 292
K + VS
Sbjct: 393 KKFLLDPVS 401
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++ ++ + + G+ + +E F K + P +YN ++++ ++ ++Q M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 72 SDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
E PD TYN ++ G + +LL EM + + TY+ ++ L K K
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P + +L M G +P V F +M G +R+ N++ + + M G PD V Y +
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 191 MITSYIAAGELEKAQDLFDGMITK--GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I G+L+++ + M + G +PNV T++++I G C G+ ++A + M
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
GC PN Y TL++ L A K+ +A E+ M +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 117/243 (48%), Gaps = 3/243 (1%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y+ ++ +L V++ M E P ++TYN+++ ++ G+ + L
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQS 70
Query: 106 MGRSG-FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
M R PD TYN L+ L A LL+ M++ +V +++++ L +
Sbjct: 71 MKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEA 130
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ +EM GC PDV + ++ + + +EKA++++ M+ G P+ +Y+
Sbjct: 131 KPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYH 190
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCN--PNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+I G GK DE+ ++ EM R PN + ++TL+ L G+L +A EV M+
Sbjct: 191 ILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 250
Query: 283 EKG 285
E G
Sbjct: 251 EAG 253
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 124/282 (43%), Gaps = 3/282 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGI 58
M+E+G+ +++ILI ++G + ++ + + + P +++ ++H L
Sbjct: 177 MVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRT 236
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + V+ M + G P+ TY ++ R K+ Q L ++M ++ PD Y
Sbjct: 237 GELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAY 296
Query: 119 NILLHVLGKGDKPLAALNLLNHMKE-VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L+ K A L M G P+++ F TL+DG + G L EM
Sbjct: 297 NSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMG 356
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG D Y ++I A +L++A +++ M K L + + S + G C G D
Sbjct: 357 TKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNID 416
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+A + + G PN + L +L G++ +A +++
Sbjct: 417 QAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ C Y ++ S AG L +A ++F+ M ++ +P++ TYN +I C AG+
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 236 FDEACTMMKEME-SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
F +A + + M+ + P+ YNTL+S L ++G A +++ M +K
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDK 110
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 12/308 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++ T+NILI C G + +A + +R K P +YN ++
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCL---PNVVTYNTLIDGYCK 252
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+R+ + + M+ +G P++++YN+V+ R G++ + +L EM + G+S D T
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K AL + M G PSV+ +T+L+ + +AGN++ F D+M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ YT ++ + G + +A + MI G P+V TYN++I G C+AGK
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A ++++M+ +G P+ + Y+T++S + + EA V R MV KG Y L+
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492
Query: 292 SKFKRYKR 299
F +R
Sbjct: 493 QGFCEQRR 500
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 131/279 (46%), Gaps = 1/279 (0%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEW 66
+T+ F++++ + + L K + S+ F P SYNA+L A + R E
Sbjct: 132 STSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+++M +P++ TYNI++ G LD R D M + G P+ TYN L+
Sbjct: 192 VFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYC 251
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K LL M G +P+++ + +++GL R G + + EM +G D V
Sbjct: 252 KLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEV 311
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y G +A + M+ G P+V TY S+I C AG + A + +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM 371
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG PN Y TLV G + EA+ V++ M++ G
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNG 410
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +++ L + K I +V +M+ GY+ D +TYN ++ + G Q + EM
Sbjct: 277 SYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G SP TY L+H + K A L+ M+ G P+ +TTL+DG S+ G +
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ EM + G P VV Y +I + AG++ A + + M KG P+V +Y+++
Sbjct: 397 NEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTV 456
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ GFC + DEA + ++M ++G P+ + Y++L+ + EA ++ M+ G
Sbjct: 457 LSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVG 515
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 135/281 (48%), Gaps = 6/281 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G+ T+N LI C G A + ++ L P +Y +++H++
Sbjct: 301 MNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL---SPSVITYTSLIHSMCK 357
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
QM G P+ TY ++ + G +++ +R+L EM +GFSP T
Sbjct: 358 AGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVT 417
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K + A+ +L MKE G P V+ ++T++ G R+ ++D +M
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + Y+ +I + ++A DLFD M+ G P+ FTY ++I +CM G
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+A + EM +G P+ + Y+ L++ L + EA ++
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLL 578
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
+ A V + ++S++ P +YN ++ + + +M +G P+++T
Sbjct: 186 ISFAENVFKEMLQSQV---SPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVT 242
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ +L K+D LL M G P+ +YN++++ L + + +L M
Sbjct: 243 YNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMN 302
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G+ + + TL+ G + GN EM G P V+ YT +I S AG +
Sbjct: 303 KRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMN 362
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A + D M +G PN TY +++ GF G +EA ++KEM G +P+ + YN L+
Sbjct: 363 RATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI 422
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ AGK+ +A V+ M EKG +VS
Sbjct: 423 NGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 141/308 (45%), Gaps = 25/308 (8%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAIL--HALLGIRQY 61
G RT+ L+ + G + R +K + N F P +YNA++ H + G
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAY-RVLKEMIDNGFSPSVVTYNALINGHCIAG---- 429
Query: 62 KLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
K+++ V + M ++G PD+++Y+ V+ R +D+ R+ +M G PD TY+
Sbjct: 430 KMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYS 489
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ + + A +L + M VG P +T L++ G+L +EM K
Sbjct: 490 SLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEK 549
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN--------------- 224
G +PDVV Y+V+I +A+ L + + +P+ TY+
Sbjct: 550 GVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVV 609
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I+GFCM G EA + + M + P+ YN ++ G + +A+ + + MV+
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKS 669
Query: 285 GKYIHLVS 292
G +H V+
Sbjct: 670 GFLLHTVT 677
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 134/302 (44%), Gaps = 25/302 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+NGF + T+N LI C G++ A V+E + L P SY+ +L
Sbjct: 406 MIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL---TPDVVSYSTVLSGF-- 460
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R Y + E V ++M +G PD +TY+ ++ + + L DEM R G PD
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L++ A+ L N M E G P V+ ++ L++GL++ K +
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580
Query: 176 MANKGCMPDVVCYTVMITS---------------YIAAGELEKAQDLFDGMITKGQLPNV 220
+ + +P V Y +I + + G + +A +F+ M+ K P+
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDG 640
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
YN MI G C G +A ++ KEM G + + LV L GK+ E + VI +
Sbjct: 641 TAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIAN 700
Query: 281 MV 282
++
Sbjct: 701 VL 702
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL--- 121
+ V++ M ++ + PD YN+++ R G + + + L EM +SGF HT ++
Sbjct: 625 DQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFL--LHTVTVIALV 682
Query: 122 --LHVLGKGDKPLAAL-NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
LH GK ++ + + N+L + + + L++ R GN+D EMA
Sbjct: 683 KTLHKEGKVNELNSVIANVLRSCELSEAEQA----KVLVEINHREGNMDVVLDVLAEMAK 738
Query: 179 KGCMPD 184
G +P+
Sbjct: 739 DGFLPN 744
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 140/278 (50%), Gaps = 11/278 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ LI C + A +V E+ + FRP +Y+ ++ L + K ++
Sbjct: 91 TYTTLITGFCKSKKSDDALRVFEQLVAR---GFRPDVVTYSCLIDGLCKEGRLKEAIDLF 147
Query: 69 QQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M G P+ +TYN ++ R+GK+D+ LL+ M +G SPD TY L++ K
Sbjct: 148 GRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A +LLN M G P+V+ FT+LMDGL R L + EM K C P V
Sbjct: 208 LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 267
Query: 188 YTVMITSYIAAGELEKAQD-LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ Y +LE+A+ + + M PNV ++N MIRG C + EA +++E
Sbjct: 268 YNTILDGYCRVNQLEEARKFMLEEMDCP---PNVVSFNIMIRGLCKVNRSSEAMELVEEA 324
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
R CNP+ ++Y T++ L K+ EA V R M+E+
Sbjct: 325 RRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+++ L + + ++M G PDI TY ++ + K D R+
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-PSVLHFTTLMDGLS 161
+++ GF PD TY+ L+ L K + A++L M + G P+ + + +L+ G
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G +D + MA G PDVV YT ++ + L+ A DL + M KG PNV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
T+ S++ G C + +A ++ EM + C+P YNT++ +L EA +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARK 286
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 109/216 (50%), Gaps = 1/216 (0%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ D P +TYN ++ + + + + LL+EM SG PD TY L+ K K
Sbjct: 45 VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYT 189
AL + + GF P V+ ++ L+DGL + G L F M G CMP+ V Y
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I+ + G++++A +L + M G P+V TY +++ GFC + D+A ++ +M +
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G PN + + +L+ L +L++A ++ M K
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 260
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 10/265 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF T++ LI C G + A + R IKS + P +YN+++
Sbjct: 115 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSG--SCMPNTVTYNSLISGFCR 172
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M++ G +PD++TY +M +L +LD + LL++M R G +P+ T
Sbjct: 173 MGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVT 232
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEM 176
+ L+ L + ++ A+++L M+ P+V + T++DG R L+ A K+ +EM
Sbjct: 233 FTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEM 292
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
C P+VV + +MI +A +L + + P+V Y ++I C K
Sbjct: 293 ---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349
Query: 237 DEACTMMKEM-ESRGCNPNFLVYNT 260
DEAC + ++M E GC PN + Y+T
Sbjct: 350 DEACRVYRKMLEEPGCLPNSITYST 374
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P V Y +I+ A +A DL + M+ G +P++FTY ++I GFC + K D+A
Sbjct: 51 VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK-------YIHLVSKF 294
+ +++ +RG P+ + Y+ L+ L G+L EA ++ M++ G Y L+S F
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170
Query: 295 KR 296
R
Sbjct: 171 CR 172
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
MI G T T+NI+I C C E G F + K P +YN+++ +
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMCKE-GDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + +++M PD++TYN ++ + GKL + EM +SG P+ +Y+
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYS 242
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K D AL M+ +G P+ +T+L+D + GNL DEM+
Sbjct: 243 TLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQV 302
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +VV YT +I +++A++LF M+T G +PN+ +Y ++I GF A D A
Sbjct: 303 GVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRA 362
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM+ RG P+ L+Y T + +L K+ A V+ M EKG
Sbjct: 363 LELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKG 408
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 130/288 (45%), Gaps = 4/288 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF F++LI E + + ++ F K K P S N +LH + + +
Sbjct: 62 GFGVFDALFSVLI----EEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ M G P + TYNI++ + G ++ L +EM G PD TYN ++
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK + + MK + +P V+ + TL++ + G L FF EM G P+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ ++ ++ +++A + M G +PN TY S++ +C G +A +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM G N + Y L+ L + ++ EA E+ MV G +L S
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLAS 345
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 123/257 (47%), Gaps = 1/257 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
P T T+N +I G+VG V F + K + P +YN +++ +
Sbjct: 165 IPDTV-TYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGL 223
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+++M G P++++Y+ ++ A + + Q + +M R G P+ HTY L+
Sbjct: 224 EFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAY 283
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K A L + M +VG + +V+ +T L+DGL + + F +M G +P++
Sbjct: 284 CKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNL 343
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
YT +I ++ A +++A +L D M +G P++ Y + I C K + A +M E
Sbjct: 344 ASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNE 403
Query: 246 MESRGCNPNFLVYNTLV 262
M+ +G N +Y TL+
Sbjct: 404 MQEKGIKANTFIYTTLM 420
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 109/252 (43%), Gaps = 17/252 (6%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F+ SY + H L R Y + ++M + +K L D F
Sbjct: 6 FKHTIESYCIVAHILFCARMYYDANRILREM---------------VLSKAELKDCDVFD 50
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L R+ P F ++ L VL + D AL + MK P L+
Sbjct: 51 VLWST--RNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKF 108
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+R G D K FF +M G P V Y +MI G++E A LF+ M +G +P+
Sbjct: 109 ARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDT 168
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYNSMI G+ G+ D+ +EM+S C P+ + YNTL++ GKL + E R
Sbjct: 169 VTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFRE 228
Query: 281 MVEKGKYIHLVS 292
M + G ++VS
Sbjct: 229 MKQSGLKPNVVS 240
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y A++ L + + K E ++ +M G P++ +Y ++ + +D+ LLDEM
Sbjct: 310 TYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEM 369
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD Y + L +K AA ++N M+E G + +TTLMD ++ N
Sbjct: 370 KGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENP 429
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK--GQLPNVFTYN 224
+ +EM V + V+I + KA D F G I+ G N Y
Sbjct: 430 SEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYF-GRISNDFGLQANAAIYT 488
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+MI G C + + A T+ ++M +G P+ Y +L+ G + +A + M E
Sbjct: 489 AMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEI 548
Query: 285 G 285
G
Sbjct: 549 G 549
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 12 TFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
T+N LI C C + G K +E F + K +P SY+ ++ A + Y
Sbjct: 205 TYNTLINCFC-KFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVD 263
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G P+ TY ++ A ++G L RL DEM + G + TY L+ L ++
Sbjct: 264 MRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVER 323
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M G P++ +T L+ G +A N+D DEM +G PD++ Y
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
I S ++E A+ + + M KG N F Y +++ +
Sbjct: 384 FIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I +GF T+N + C VG A KV++ ++ P +YN +++ L
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE---GHDPDVFTYNIVVNCLCKN 334
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q + + + QM D G PDI T+N ++ A +L++ L ++ G SPD +T+
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 394
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P AL L MK G P + + TL+D L G L +M +
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 454
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC + Y +I +E+A+++FD M +G N T+N++I G C K D+
Sbjct: 455 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 514
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ +M S G PN + YN+++++ G + +A +++ M G + +V+
Sbjct: 515 AFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVT 568
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 132/280 (47%), Gaps = 35/280 (12%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD--- 97
+P ++N ++ AL Q + + ++MS G APD T+ +M G ++
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236
Query: 98 --------------------------QFHRLLDEMG------RSGFSPDFHTYNILLHVL 125
+ R+ D +G GF PD TYN ++ L
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ D AL +++ M + G DP V + +++ L + G L+ K ++M ++GC+PD+
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ +I + LE+A DL + KG P+V+T+N +I C G A + +E
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M++ GC P+ + YNTL+ NL + GKL +A ++++ M G
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 150/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+NI++ C C G++ A+ ++ + + P ++N ++ AL
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL---PDITTFNTLIAALCT 368
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Q++ +G +PD+ T+NI++ A ++G RL +EM SG +PD T
Sbjct: 369 GNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVT 428
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K AL+LL M+ G S + + T++DGL + ++ + FD+M
Sbjct: 429 YNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + + + +I +++ A L + MI++G PN TYNS++ +C G
Sbjct: 489 LQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIK 548
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++ M + G + + Y TL++ L AG+ A +V+R M KG
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 2/249 (0%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
LF + YN +L+ L+ + KL+E VY +M G PD++T+N +M A R ++
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVR 198
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+L+EM G +PD T+ L+ + AAL + M E+G + + L+
Sbjct: 199 TAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 158 DGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+G + G + DA Y E+A+ G PD + Y + + A + D M+ +G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGH 317
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+VFTYN ++ C G+ +EA ++ +M RGC P+ +NTL++ L +L EA +
Sbjct: 318 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALD 377
Query: 277 VIRHMVEKG 285
+ R + KG
Sbjct: 378 LARQVTVKG 386
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 141/293 (48%), Gaps = 14/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G TFN LI CT + LAR+V + + ++ F N +++
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF-------NILIN 399
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL + L ++++M + G PD +TYN ++ LGKL + LL +M +G
Sbjct: 400 ALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPR 459
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN ++ L K + A + + M G + + F TL+DGL + +D
Sbjct: 460 STITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLI 519
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M ++G P+ + Y ++T Y G+++KA D+ + M G +V TY ++I G C A
Sbjct: 520 NQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKA 579
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G+ A +++ M +G P YN ++ +L + +A + R M E G+
Sbjct: 580 GRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGE 632
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 8/295 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFNILI C G+ LA ++ E S P + +YN ++ L + +
Sbjct: 386 GVSPDVYTFNILINALCKVGDPHLALRLFEEMKNS---GCTPDEVTYNTLIDNLCSLGKL 442
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M G +TYN ++ + ++++ + D+M G S + T+N L
Sbjct: 443 GKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTL 502
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A L+N M G P+ + + +++ + G++ + M G
Sbjct: 503 IDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGF 562
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
DVV Y +I AG + A + GM KG P YN +++ +A +
Sbjct: 563 EVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622
Query: 242 MMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
+ +EM G P+ L Y + L R G + EA + + MV+KG +I S F+
Sbjct: 623 LFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG-FIPEFSSFR 676
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 120/264 (45%), Gaps = 11/264 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIRQYKLIEWV 67
T+N LI C+ G++G A +++ + P +YN I+ L + + E V
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGC----PRSTITYNTIIDGLCKKMRIEEAEEV 483
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN-ILLHVLG 126
+ QM +G + + +T+N ++ + K+D L+++M G P+ TYN IL H
Sbjct: 484 FDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCK 543
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+GD AA ++L M GF+ V+ + TL++GL +AG M KG P
Sbjct: 544 QGDIKKAA-DILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPK 602
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG-KFDEACTMMKE 245
Y ++ S + A LF M G+ P+ TY + RG C G EA M E
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 662
Query: 246 MESRGCNPNFLVYNTLVSNLRNAG 269
M +G P F + L L N G
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNLG 686
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 144/289 (49%), Gaps = 5/289 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G + + N+++ C G V A ++ S F P + ++N +++ L
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM--SNQDGFFPDQYTFNTLVNGLCK 307
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + M EGY PD+ TYN V+ +LG++ + LD+M SP+ T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K ++ A L + G P V F +L+ GL N F+EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC PD Y ++I S + G+L++A ++ M G +V TYN++I GFC A K
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + EME G + N + YNTL+ L + ++ +A +++ M+ +G+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ 536
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 142/282 (50%), Gaps = 5/282 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P T T+N LI T + + E R + SK P ++N+++ L R +++
Sbjct: 363 PNTV-TYNTLISTLCKENQVEEATELARVLTSK--GILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++++M +G PD TYN+++ + GKLD+ +L +M SG + TYN L+
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K +K A + + M+ G + + + TL+DGL ++ ++ D+M +G PD
Sbjct: 480 FCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPD 539
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y ++T + G+++KA D+ M + G P++ TY ++I G C AG+ + A +++
Sbjct: 540 KFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
++ +G YN ++ L K EA + R M+E+ +
Sbjct: 600 SIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 8/257 (3%)
Query: 34 IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
+ SK NF P Y IL L + + + + M + G + I++ + +
Sbjct: 72 LASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQF 131
Query: 94 GKLDQF----HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
D+ H ++D+ G PD H YN +L++L G+ M G P
Sbjct: 132 ELQDEILGVVHWMIDDFG---LKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPD 188
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
V F L+ L RA L ++M + G +PD +T ++ YI G+L+ A + +
Sbjct: 189 VSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIRE 248
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPNFLVYNTLVSNLRNA 268
M+ G + + N ++ GFC G+ ++A ++EM ++ G P+ +NTLV+ L A
Sbjct: 249 QMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 269 GKLAEAHEVIRHMVEKG 285
G + A E++ M+++G
Sbjct: 309 GHVKHAIEIMDVMLQEG 325
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 2/217 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+G + T+N LI + R+ E F + ++ +YN ++ L R+ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ QM EG PD TYN ++ R G + + ++ M +G PD TY L+
Sbjct: 524 ASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CM 182
L K + A LL ++ G + + ++ GL R F EM +
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAA 643
Query: 183 PDVVCYTVMITSYI-AAGELEKAQDLFDGMITKGQLP 218
PD V Y ++ G + +A D ++ KG +P
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 8/276 (2%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNS--YNAILHALLGIRQYKL 63
P T RTF IL + R S + R ++ +N++L AL R
Sbjct: 122 LPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRSHRVVQDLPLFNSLLDALGKSRHASK 181
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + + + + PD++TYN + R + LL +M SG +P TYNI+L
Sbjct: 182 AASLVRAL-ERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILK 240
Query: 124 VLGKGDKPLAALNLLNHMKEVGFD-----PSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + A N MK+ G P ++ +TT++ GL AG LD + FDEM+
Sbjct: 241 GFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSK 300
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+GC P V Y +I G +E A +FD M+ K +PNV TY +IRG C GK D
Sbjct: 301 EGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDR 360
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A +M+ M+ GC P YN L+ G++ +A
Sbjct: 361 AMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKA 396
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 18/296 (6%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E FP T+N L C + A ++ + +S P K +YN IL
Sbjct: 189 LERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAES---GVTPTKTTYNIILKGFFRA 245
Query: 59 RQYKLIEWVYQQMS-----DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
Q + + QM DE PDI++Y ++ G+LD+ +L DEM + G +P
Sbjct: 246 GQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTP 305
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN L+ V+ K A+ + + M + P+V+ +T L+ GL G +D
Sbjct: 306 SVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLM 365
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ--LPNVFTYNSMIRGFC 231
+ M +GC P V Y V+I GE+EKA LF+ M +KG+ LPN TYN +I
Sbjct: 366 ERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERM-SKGEDCLPNQDTYNIIISAMF 424
Query: 232 MAGKFDEACT---MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ + ++ T M+ EM RG P + N +++ L G + +++R M EK
Sbjct: 425 VRKRAEDMATAARMVMEMVERGYLPRRFMLNRVLNGLMLTGNQQISRDLLR-MQEK 479
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 130/274 (47%), Gaps = 22/274 (8%)
Query: 34 IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI-LTYNIVMCAKYR 92
+ ++L + R NS A+ L + ++++ + PDI + + + +R
Sbjct: 99 LSARLRHPRQLTNSILALFPRLRLPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRSHR 158
Query: 93 LGK-LDQFHRLLDEMGRSG---------------FSPDFHTYNILLHVLGKGDKPLAALN 136
+ + L F+ LLD +G+S F PD TYN L + AL+
Sbjct: 159 VVQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVVTYNTLADGWCRAKDTSRALD 218
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-----CMPDVVCYTVM 191
LL M E G P+ + ++ G RAG + FF +M +G C PD+V YT +
Sbjct: 219 LLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTI 278
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I AG+L+KA+ LFD M +G P+V TYN++I+ C G ++A T+ +M +
Sbjct: 279 IHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDY 338
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + Y L+ L + GK+ A +++ M +G
Sbjct: 339 MPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEG 372
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 137/279 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ GF T+ LI +VG + + N +P Y +I+ +L RQ
Sbjct: 152 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 211
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ QM +G +PDI TY ++ A L + LL++M S PD ++
Sbjct: 212 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 271
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A +++ M + G +P V+ +TTLMDG +D FD M KG
Sbjct: 272 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ YT +I Y +++KA LF+ M K +P+ TYN+++ G C G+ +A
Sbjct: 332 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAI 391
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM +RG P+ + Y+ L+ +L L EA +++
Sbjct: 392 ALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK 430
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 139/286 (48%), Gaps = 3/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
PTT T +C G++G A + ++ I F+P +Y +++ L +
Sbjct: 126 PTTFTTLIRGLCVEGKIGEALHLFDKMIDE---GFQPNVVTYGTLINGLCKVGNTSAAIR 182
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M PD++ Y ++ + + ++ + L +M G SPD TY L+H L
Sbjct: 183 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 242
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ LLN M P V+ F+T++D L + G + D M +G PDVV
Sbjct: 243 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 302
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ + E+++A +FD M+ KG P+V +Y ++I G+C K D+A + +EM
Sbjct: 303 TYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEM 362
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ P+ YNTL+ L + G+L +A + MV +G+ LV+
Sbjct: 363 CRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V A ++V+ I+ + P +Y ++ + V+ M +G+
Sbjct: 276 LCKEGKVTEAHEIVDMMIQRGV---EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APD+++Y ++ ++ K+D+ L +EM R + PD TYN L+H L + A+
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P ++ ++ L+D L + +L+ + PD+ Y ++I
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG P+V+TYN MI G C G +EA + EM+ C+P+
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 512
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+ + A +++ M+ +G
Sbjct: 513 TYNTIARGFLQNNETLRAIQLLEEMLARG 541
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 128/243 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L ++ ++ Y + + QM G P++ T NI++ + L ++ +
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M + GF P+V+ + TL++GL +
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M C PDVV YT +I S ++ +A +LF M+ +G P++FT
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S++ C ++ T++ +M + P+ ++++T+V L GK+ EAHE++ M+
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293
Query: 283 EKG 285
++G
Sbjct: 294 QRG 296
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 127/272 (46%), Gaps = 6/272 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ L+ C E+ A KV + ++ F P SY +++
Sbjct: 292 MIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK---GFAPDVISYTTLINGYCK 348
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + +++++M + + PD TYN +M +G+L L EM G PD T
Sbjct: 349 IHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVT 408
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K A+ LL ++ +P + + ++DG+ RAG L+A + F ++
Sbjct: 409 YSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLS 468
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P V Y +MI G L +A LF M P+ TYN++ RGF +
Sbjct: 469 SKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETL 528
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
A +++EM +RG + + LV L + G
Sbjct: 529 RAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + F L+ + ++ V+ + F P + N ++++ + +
Sbjct: 53 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 112
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++ G+ PD T+ ++ GK+ + L D+M GF P+ TY L++ L
Sbjct: 113 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 172
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AA+ LL M++ P V+ +T+++D L + + F +M +G PD+
Sbjct: 173 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 232
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ + E + L + M+ LP+V +++++ C GK EA ++ M
Sbjct: 233 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 292
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG P+ + Y TL+ ++ EA +V MV KG
Sbjct: 293 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 331
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 112/246 (45%), Gaps = 6/246 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ GF ++ LI C ++ A + E + + + P +YN ++H L
Sbjct: 327 MVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE---WIPDTKTYNTLMHGLCH 383
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ +M G PD++TY+I++ + + L++ LL + S +PD
Sbjct: 384 VGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQV 443
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI++ + + + AA +L +++ G PSV + ++ GL + G L+ F EM
Sbjct: 444 YNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMD 503
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C PD Y + ++ E +A L + M+ +G +V T ++ G
Sbjct: 504 GNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDGLDQ 563
Query: 238 EACTMM 243
+C +M
Sbjct: 564 SSCFLM 569
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L F+RLL P + LL + K L+L M G P+V
Sbjct: 41 LSSFNRLL----HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ + ++ G PD +T +I G++ +A LFD MI +G
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV TY ++I G C G A +++ ME C P+ ++Y +++ +L ++ EA
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216
Query: 276 EVIRHMVEKG 285
+ MV +G
Sbjct: 217 NLFSQMVGQG 226
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+FH+ ++ + L D L++ N L HM PS++ F L+ +++ +
Sbjct: 26 NFHSKSLHFNTL---DDALSSFNRLLHMHP---PPSIVDFAKLLTSIAKMKHYSTVLSLS 79
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M + G P+V ++I S+ + A + ++ G P+ T+ ++IRG C+
Sbjct: 80 TQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVE 139
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK EA + +M G PN + Y TL++ L G + A ++R M E+G
Sbjct: 140 GKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQG 190
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V A KV + + +P YNA++ + +M + G A
Sbjct: 232 CKVGRVDEAVKVFDEMLTKG--EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 289
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TYN+++ A + G+ + + L++EMG G + D TYNIL++ K AL +
Sbjct: 290 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEI 349
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+M G +V+ +T+L+ LS+ G + FDE +G PD+V Y +I S+
Sbjct: 350 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 409
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+G +++A ++ M K P+ TYN+++RG C+ G+ DEA ++ EM RG P+ +
Sbjct: 410 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL+S G + +A + M+ KG
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKG 497
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 124/255 (48%), Gaps = 14/255 (5%)
Query: 47 SYNAILHALL----GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
+YN ++HAL G Y+L+E +M +G A D+ TYNI++ + G + + +
Sbjct: 294 TYNLLVHALFMDGRGTEAYELVE----EMGGKGLALDVFTYNILINGHCKEGNVKKALEI 349
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M R G TY L++ L K + L + G P ++ + L++ S
Sbjct: 350 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 409
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+GN+D EM K PD V Y ++ G +++A+ L D M +G P++ T
Sbjct: 410 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+ M G +A + EM ++G NP L YN L+ L G+ +A +++ MV
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 529
Query: 283 EKG------KYIHLV 291
E G YI L+
Sbjct: 530 ENGITPDDSTYISLI 544
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T T+N+L+ G A ++VE + K F +YN +++
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEE-MGGKGLALDVF--TYNILINGHCK 339
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K +++ MS G ++TY ++ A + G++ + +L DE R G PD
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ A ++ M++ P + + TLM GL G +D + DEM
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMT 459
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD+V Y +I+ Y G+++ A + + M+ KG P + TYN++I+G C G+ D
Sbjct: 460 KRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGD 519
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
+A M+KEM G P+ Y +L+ L
Sbjct: 520 DAENMVKEMVENGITPDDSTYISLIEGL 547
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+NI+L L KP AL LL M P+ + + T++ G G + A EM
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 177 ANKGCM-PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAG 234
+G + P+ Y +I+ + G +++A +FD M+TKG++ P YN++I G+C G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K D A M RG YN LV L G+ EA+E++ M KG
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 6/213 (2%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
T+NI++ GK + LL +M R P+ TYN ++ + AAL+++ M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 142 KEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAG 199
+E G P+ + T++ G + G +D FDEM KG P+ V Y +I Y G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L+ A D M+ +G V TYN ++ M G+ EA +++EM +G + YN
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L++ G + +A E+ +M +G +V+
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 9/169 (5%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+LL +L L + MK + S L+ L A F +M
Sbjct: 92 NLLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSAPAF----ALFADMFR 147
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ +M+ +AG+ +A +L M PN TYN++I GFC G+
Sbjct: 148 LRLPLCTTTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQA 203
Query: 239 ACTMMKEMESR-GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +M+EM R G PN Y T++S G++ EA +V M+ KG+
Sbjct: 204 ALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 252
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI T G + A +++ K ++ P +YN ++ L + + +
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIA---PDDVTYNTLMRGLCLLGRVDEARKLID 456
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M+ G PD++TYN ++ G + R+ +EM GF+P TYN L+ L K
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 516
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ A N++ M E G P + +L++GL+
Sbjct: 517 QGDDAENMVKEMVENGITPDDSTYISLIEGLT 548
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L +C G V ARK+++ K +P +YN ++ K +
Sbjct: 434 TYNTLMRGLCLLGRVDEARKLIDEMTKR---GIQPDLVTYNTLISGYSMKGDVKDALRIR 490
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G+ P +LTYN ++ + G+ D ++ EM +G +PD TY L+ L
Sbjct: 491 NEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550
Query: 129 DK 130
D+
Sbjct: 551 DE 552
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GE+ LA +E F ++ + FR S N +L +L+ + ++E VY++M ++
Sbjct: 173 GEMDLA---LEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNV 229
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+T+++V+ ++GK + ++++M GFSP TYN ++ K K A LL
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M P+ + F L+DG R N+ A K F+EM +G P+VV Y +I + G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A L D M G PNV TYN++I GFC EA M+ ++ RG PN + +NT
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ AG++ +A + M++ G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTG 434
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 143/298 (47%), Gaps = 9/298 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TF+++I C G+ A VVE K + F P +YN I+
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM---KAWGFSPSVITYNTIIDGYCK 276
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M + P+ +T+NI++ R + ++ +EM R G P+ T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ L K AL L + M +G P+V+ + L++G + L + D++
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+V+ + +I +Y AG ++ A L M+ G PNV TYN +I GFC G
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV---EKGKYIHLVS 292
EA + KEME G + + YN LV L G+ +A ++ M +KG+ ++V+
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVT 514
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 130/264 (49%), Gaps = 9/264 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI C V A+KV E + L +P +YN++++ L + +
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGL---QPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+MS G P+++TYN ++ + L + +LD++G+ G +P+ T+N L+ GK
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L + M + G P+V + L+ G R GN+ + EM G D+V Y
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477
Query: 189 TVMITSYIAAGELEKAQDLFDGMI---TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+++ + GE KA L D M KG+ N+ TYN +I+GFC GK +EA ++ E
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNE 537
Query: 246 MESRGCNPNFLVYNTLVSNLRNAG 269
M +G PN Y+ L + G
Sbjct: 538 MLEKGLIPNRTTYDILRDEMMEKG 561
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 141/287 (49%), Gaps = 9/287 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF + T+N +I C G++ A +++ + ++ P + ++N ++
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI---HPNEITFNILIDGFCRDENV 315
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+++M +G P+++TYN ++ GKLD+ L D+M G P+ TYN L
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K A +L+ + + G P+V+ F TL+D +AG +D M + G
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+V Y +I + G +++A+ L M G ++ TYN ++ C G+ +A
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495
Query: 242 MMKEM---ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM E +G N + YN L+ N GKL EA+ ++ M+EKG
Sbjct: 496 LLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 542
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 8/292 (2%)
Query: 5 GFPTTARTFNILICTC---GEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGIRQ 60
GF +A + N ++ + G +G+ V + I+ ++ N F + +++ L + +
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF----DVVINGLCKVGK 244
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ V + M G++P ++TYN ++ + GK+ + LL EM P+ T+NI
Sbjct: 245 FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + AA + M+ G P+V+ + +L++GL G LD D+M+ G
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y +I + L++A+++ D + +G PNV T+N++I + AG+ D+A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M G PN YN L+ G + EA ++ + M G LV+
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVT 476
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL + + GF S L ++ L + G + + + EM + +VV + V+I
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+ +KA D+ + M G P+V TYN++I G+C AGK +A ++KEM ++ +P
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N + +N L+ + A +V M +G ++V+
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 24/148 (16%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G P++ TYN ++ R G + + +L EM +G D TYNIL+ L K +
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489
Query: 131 PLAALNLLNHM---KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF-------------- 173
A+ LL+ M ++ G +++ + L+ G G L+
Sbjct: 490 TRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549
Query: 174 -----DEMANKGCMPDVV--CYTVMITS 194
DEM KG +PD+ Y V I+S
Sbjct: 550 YDILRDEMMEKGFIPDIDGHLYNVSISS 577
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 54/196 (27%)
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK------------------GCMP 183
KE G +V F L+ L+ A N + + D A GC
Sbjct: 99 KEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCAN 158
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFD-------------------GMITKGQLP------ 218
++ +++ +Y+ GE++ A + FD ++ +G++
Sbjct: 159 SIIV-DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217
Query: 219 ----------NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
NV T++ +I G C GKF +A ++++M++ G +P+ + YNT++ A
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 269 GKLAEAHEVIRHMVEK 284
GK+ +A +++ MV K
Sbjct: 278 GKMFKADALLKEMVAK 293
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 145/320 (45%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ G T+N LI +G ++VV + +P +Y ++L+ L +
Sbjct: 264 MIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGR 323
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +++ M +G P++ Y I++ G L + H LL+ M +G SPD H +NI
Sbjct: 324 CREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNI 383
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD------------- 167
+ K A+++ N MK+ G P V+++ L+D L + G +D
Sbjct: 384 IFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEG 443
Query: 168 ----------------------ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
K F+ EM N+G PDVV + ++ + G++ KAQ
Sbjct: 444 VAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQ 503
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L D M G P V +Y ++I G C+ G+ DEA + M S G P+ YNTL+
Sbjct: 504 RLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGY 563
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
AG++ +A+ V R M+ G
Sbjct: 564 CRAGRIDDAYGVFREMLRNG 583
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 143/321 (44%), Gaps = 35/321 (10%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P ++ I+I G K F++ +P +Y ++ L + E
Sbjct: 200 PPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEG 259
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL- 125
V+QQM D+G PD TYN ++ +GK + R+L+EM G PD +TY LL+ L
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLC 319
Query: 126 ----------------GKGDKPLAAL------------------NLLNHMKEVGFDPSVL 151
KG KP A+ +LLN M E G P
Sbjct: 320 NNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHH 379
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
F + ++ +D + F++M +G PDVV Y +I + G ++ A F+ M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQM 439
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +G PN+F +NS++ G C K+++A EM ++G P+ + +NT++ NL G++
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499
Query: 272 AEAHEVIRHMVEKGKYIHLVS 292
+A +I M G ++S
Sbjct: 500 MKAQRLIDLMERVGTRPGVIS 520
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 129/284 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ENG FNI+ + + + + F K K P +Y A++ AL + +
Sbjct: 369 MVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGR 428
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM +EG AP+I +N ++ + K ++ EM G PD +N
Sbjct: 429 VDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNT 488
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L L + + A L++ M+ VG P V+ +TTL+ G G +D D M + G
Sbjct: 489 ILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVG 548
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD Y ++ Y AG ++ A +F M+ G P V TY++++ G +F EA
Sbjct: 549 LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAK 608
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M + G N +YN +++ L + EA ++ + + K
Sbjct: 609 ELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK 652
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 123/234 (52%), Gaps = 11/234 (4%)
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPD 114
R + ++ + ++M + G PD+++YN ++ C + R + L+ H + D GRS P+
Sbjct: 144 RLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRS-CPPN 202
Query: 115 FHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+Y I+++ G+ DK A NL M + G P+V+ +TT++DGL +A +D +
Sbjct: 203 VVSYAIVINGFFTEGQVDK---AYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEG 259
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F +M +KG PD Y +I Y++ G+ ++ + + M G P+ +TY S++ C
Sbjct: 260 VFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLC 319
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ EA + M +G PN +Y L+ G L+E H+++ MVE G
Sbjct: 320 NNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENG 373
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 39/248 (15%)
Query: 77 APDILTYNIVMCAKYRLGKLDQ------------------------------------FH 100
PD TY+I++ R+G+L+
Sbjct: 91 TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV---GFDPSVLHFTTLM 157
L+ M G +PD +YN LL + AL LL+ M + P+V+ + ++
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+G G +D F EM ++G P+VV YT +I A +++A+ +F MI KG
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+ TYN +I G+ GK+ E M++EM + G P+ Y +L++ L N G+ EA +
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330
Query: 278 IRHMVEKG 285
M+ KG
Sbjct: 331 FDSMIRKG 338
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 128/289 (44%), Gaps = 10/289 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
M+ G FN ++C T G+V A+++++ + RP SY ++ H L
Sbjct: 474 MLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER---VGTRPGVISYTTLIGGHCL 530
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+G + M G PD TYN ++ R G++D + + EM R+G +P
Sbjct: 531 VG--RIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ +LH L + A L +M G ++ + +++GLS+ +D F
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +K ++ + +MI + +G E A LF + + G +P+VFTY + G
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+E + ME G PN + N LV L + G + A + + EK
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEK 757
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 112/264 (42%), Gaps = 7/264 (2%)
Query: 29 VVERFIKSKLFNF-------RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
V+++ K+K F F RP +N IL L Q + + M G P ++
Sbjct: 460 TVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVI 519
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
+Y ++ +G++D+ + LD M G PD TYN LLH + + A + M
Sbjct: 520 SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G P V+ ++T++ GL K + M G ++ Y +++ +
Sbjct: 580 LRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCV 639
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A LF + +K + T+N MI +G+ ++A + + S G P+ Y +
Sbjct: 640 DEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLI 699
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
NL G L E ++ M + G
Sbjct: 700 AENLIEEGYLEEFDDLFSAMEKSG 723
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 151 LHFTTLMDGLSRAGNL---DACKYFFDEMANKGCMPDVVCYTVMITSYI-------AAGE 200
L ++ +R+G+L DA K FD + V+ + ++T+ + E
Sbjct: 13 LELERVIGSRARSGSLGLDDALK-LFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTE 71
Query: 201 LEKAQDLFDGMITKGQL---PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
E LF+ MI + + P+ TY+ +I FC G+ + + G N +V
Sbjct: 72 SELVVSLFNRMIRECTIKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIV 131
Query: 258 YNTLVSNLRNAGKLAEAHEV-IRHMVEKGKYIHLVS 292
N L+ L +A +L EA ++ ++ M E G +VS
Sbjct: 132 INQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVS 167
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H+ + + +L + V+ ++ G P ++++N +M +LG L++ RL + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++AQDL D MI KG P+ FTY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
E G Y ++++F
Sbjct: 379 PEIGTYTMIINEF 391
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDG 411
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G P++
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G P+V T
Sbjct: 383 TYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +M +G PD TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G P VV
Sbjct: 409 RDGYKPSVV 417
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 109/211 (51%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G AP + YN ++ + + GKLD+ L + MG G P+ TY+IL+ K K A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L+ L M EVG +V +++L+ G + G L A K FDEM G P+VV YT +I+
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
Y GEL A L+ M KG PN +T+ ++I G C A + EA + EM PN
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN L+ G A E++ MVEKG
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLAR--KVVERFIKSKLFNFRPFK---NSYNAILHAL 55
M +G + T+N+ I GL + +V E L +++ + +Y ++ L
Sbjct: 241 MESSGCDLSVATYNVFI-----RGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ +++ E + +M + G+ P + ++ + G + L++++ + G +P
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
YN L++ + K K A +L N+M G P+ + ++ L+D + G LD +F +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G V Y+ +I+ + G+L A+ LFD MI G PNV Y S+I G+C G+
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + EM +G +PN + L+S L +A ++AEA+++ MVE
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 139/328 (42%), Gaps = 49/328 (14%)
Query: 1 MIENGF-PTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE GF P+ A N++ + G +G A +V K K F P YNA+++++
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVN---KVKKFGVAPSLFVYNALINSMCK 367
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAK------------------------ 90
+ E ++ M +G P+ +TY+I++ C +
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427
Query: 91 --------YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+LGKL L DEM +G P+ Y L+ K + A L + M
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P+ FT L+ GL A + F EM +P+ V Y V+I + G
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM--------ESRGCNPN 254
+A +L D M+ KG +P+ +TY +I G C G+ EA M ++ E GC PN
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPN 607
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ Y L++ L G + +A + R M+
Sbjct: 608 VVTYTALINGLCKIGLMDKAELLCREML 635
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 47 SYNAILHALL-GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN + L R ++ +E + +S +G D+ TY ++ ++ + + +++E
Sbjct: 252 TYNVFIRGLCKNQRVWEAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M GF P + L+ L K +A +L+N +K+ G PS+ + L++ + + G
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD + F+ M +KG P+ V Y+++I S+ G+L+ A M G V+ Y+S
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G C GK A ++ EM + G PN ++Y +L+S G+L A + M KG
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + + +L+ L+ IRQ+++ ++ ++ G PD+ Y V+ + L + +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M SG TYN+ + L K + A+ + N + G V + TL+ GL +
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+A + +EM G +P + ++ G + A DL + + G P++F
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I C GK DEA ++ M +G PN + Y+ L+ + GKL A + M
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417
Query: 283 EKG 285
E G
Sbjct: 418 EVG 420
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 50/331 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI NG + LI C GE+ A ++ + P ++ A++ L
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI---SPNTYTFTALISGLCH 507
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M + P+ +TYN+++ + G + LLDEM G PD +T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567
Query: 118 YNILLHVLGKGDKPLAALNLLNHMK-------EV-GFDPSVLHFTTLMDGLSRAGNLDAC 169
Y L+ L + A +N ++ E+ G P+V+ +T L++GL + G +D
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKA 627
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ EM +P+ Y + + G +EKA L D ++ +G L N TYN +IRG
Sbjct: 628 ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHD-VLLEGFLANTVTYNILIRG 686
Query: 230 FCMAGKFDEACTMM-----------------------------------KEMESRGCNPN 254
FC G+ EA ++ + M +RG NP+
Sbjct: 687 FCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPD 746
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN L+ G+L +A E+ M+ +G
Sbjct: 747 TVAYNFLIYGCCVTGELTKAFELRDDMMRRG 777
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 9/270 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E T+N+LI C G L ++VE+ + + +RP + +
Sbjct: 521 MVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGR 580
Query: 54 ALLGIRQYKLIEWVYQQMSD-EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
++ Q++++ EG P+++TY ++ ++G +D+ L EM S
Sbjct: 581 VSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSL 640
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ +TY L L A+ L + + E GF + + + L+ G + G +
Sbjct: 641 PNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEV 699
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
M + G PD + Y+ +I Y G+L++A L++ M+ +G P+ YN +I G C+
Sbjct: 700 LVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCV 759
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G+ +A + +M RG PN YN+L+
Sbjct: 760 TGELTKAFELRDDMMRRGVKPNRATYNSLI 789
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 15/243 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVV-----ERFIKSKLFNFRPFKNSYNAIL 52
M+E G T+ LI C+ G V AR+ + E+ +++ P +Y A++
Sbjct: 556 MVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALI 615
Query: 53 HALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRS 109
+ L I E + ++M P+ TY + ++ + K Q H +L E
Sbjct: 616 NGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE---- 671
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
GF + TYNIL+ K + A +L +M + G P + ++T++ R G+L
Sbjct: 672 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 731
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
++ M N+G PD V Y +I GEL KA +L D M+ +G PN TYNS+I G
Sbjct: 732 IKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Query: 230 FCM 232
C+
Sbjct: 792 TCL 794
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + M D G P I T + V+ R+ + L DE+ SG PD + Y ++ L
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A ++ M+ G D SV + + GL + + + ++ KG DV
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ E E +++ + MI G +P+ ++++ G G A ++ ++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ G P+ VYN L++++ GKL EA + +M KG +
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLF 387
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
F LD + FS +++L+ + + L L ++ M + G P + + +++
Sbjct: 130 FESFLDSYRKCNFSTTL-GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLN 188
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL R + FDE+ + G PDV YT ++ S + +A+++ M + G
Sbjct: 189 GLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDL 248
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TYN IRG C + EA + + +G + Y TLV L + E++
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308
Query: 279 RHMVEKG 285
M+E G
Sbjct: 309 NEMIEFG 315
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 6/130 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ + + + V M D G +PD ++Y+ ++ R G L + +L + M
Sbjct: 679 TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP------SVLHFTTLMDGL 160
G +PD YN L++ + A L + M G P S++H T LM +
Sbjct: 739 LNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 798
Query: 161 SRAGNLDACK 170
S + +CK
Sbjct: 799 SSTADYFSCK 808
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GE+ LA +E F ++ + FR S N +L +L+ + ++E VY++M ++
Sbjct: 173 GEMDLA---LEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNV 229
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+T+++V+ ++GK + ++++M GFSP TYN ++ K K A LL
Sbjct: 230 VTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M P+ + F L+DG R N+ A K F+EM +G P+VV Y +I + G+
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A L D M G PNV TYN++I GFC EA M+ ++ RG PN + +NT
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ AG++ +A + M++ G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTG 434
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 136/277 (49%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNILI C V A+KV E + L +P +YN++++ L + +
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGL---QPNVVTYNSLINGLCSNGKLDEALGLQ 357
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+MS G P+++TYN ++ + L + +LD++G+ G +P+ T+N L+ GK
Sbjct: 358 DKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKA 417
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L + M + G P+V + L+ G R GN+ + EM G D+V Y
Sbjct: 418 GRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTY 477
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++ + GE KA L D M G P+ TYN++I G+ G A + ME
Sbjct: 478 NILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEK 537
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G N + YN L+ N GKL EA+ ++ M+EKG
Sbjct: 538 KGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 574
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TF+++I C G+ A VVE K + F P +YN I+
Sbjct: 220 MIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM---KAWGFSPSVITYNTIIDGYCK 276
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M + P+ +T+NI++ R + ++ +EM R G P+ T
Sbjct: 277 AGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ L K AL L + M +G P+V+ + L++G + L + D++
Sbjct: 337 YNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIG 396
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+V+ + +I +Y AG ++ A L M+ G PNV TYN +I GFC G
Sbjct: 397 KRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + KEME G + + YN LV L G+ +A ++ M E G
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVG 504
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 8/292 (2%)
Query: 5 GFPTTARTFNILICTC---GEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGIRQ 60
GF +A + N ++ + G +G+ V + I+ ++ N F + +++ L + +
Sbjct: 189 GFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTF----DVVINGLCKVGK 244
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ V + M G++P ++TYN ++ + GK+ + LL EM P+ T+NI
Sbjct: 245 FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + AA + M+ G P+V+ + +L++GL G LD D+M+ G
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y +I + L++A+++ D + +G PNV T+N++I + AG+ D+A
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M G PN YN L+ G + EA ++ + M G LV+
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVT 476
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 139/291 (47%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF + T+N +I C G++ A +++ + ++ P + ++N ++
Sbjct: 259 GFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRI---HPNEITFNILIDGFCRDENV 315
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+++M +G P+++TYN ++ GKLD+ L D+M G P+ TYN L
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K A +L+ + + G P+V+ F TL+D +AG +D M + G
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+V Y +I + G +++A+ L M G ++ TYN ++ C G+ +A
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ EM G NP+ L YN L+ G A V M +KG+ ++V+
Sbjct: 496 LLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVT 546
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G P++ TYN ++ R G + + +L EM +G D TYNIL+ L K +
Sbjct: 430 MLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGE 489
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+ LL+ M EVG +PS L + L+DG R GN A M KG ++V Y V
Sbjct: 490 TRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNV 549
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+I + G+LE+A L + M+ KG +PN TY+
Sbjct: 550 LIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 79/159 (49%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL + + GF S L ++ L + G + + + EM + +VV + V+I
Sbjct: 178 ALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVIN 237
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+ +KA D+ + M G P+V TYN++I G+C AGK +A ++KEM ++ +P
Sbjct: 238 GLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHP 297
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N + +N L+ + A +V M +G ++V+
Sbjct: 298 NEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVT 336
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 25/213 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR--PFKNSYNAILHALLGIRQYK 62
G TFN LI G+ G R ++S + + P ++YN ++ K
Sbjct: 399 GLAPNVITFNTLIDAYGKAG--RMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVK 456
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ ++M G D++TYNI++ A + G+ + RLLDEM G +P TYN L+
Sbjct: 457 EARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALI 516
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF--------- 173
+ AALN+ M++ G +++ + L+ G G L+
Sbjct: 517 DGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLI 576
Query: 174 ----------DEMANKGCMPDVV--CYTVMITS 194
DEM KG +PD+ Y V I+S
Sbjct: 577 PNRTTYDILRDEMMEKGFIPDIDGHLYNVSISS 609
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 83/196 (42%), Gaps = 54/196 (27%)
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK------------------GCMP 183
KE G +V F L+ L+ A N + + D A GC
Sbjct: 99 KEFGAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCAN 158
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFD-------------------GMITKGQLP------ 218
++ +++ +Y+ GE++ A + FD ++ +G++
Sbjct: 159 SIIV-DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217
Query: 219 ----------NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
NV T++ +I G C GKF +A ++++M++ G +P+ + YNT++ A
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277
Query: 269 GKLAEAHEVIRHMVEK 284
GK+ +A +++ MV K
Sbjct: 278 GKMFKADALLKEMVAK 293
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 136/263 (51%), Gaps = 2/263 (0%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ-MSDEGYAPDILT 82
G + E + KL P K +++A++ R+ +Y++ ++ + PD++T
Sbjct: 127 GKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVT 186
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
Y ++ + G L++ ++L M P+ TY+ LLH L K AL+L M
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P+V+ +TTL+ GL A +DA + DEM C PD V Y ++ Y G +E
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES-RGCNPNFLVYNTL 261
+A+ LF M TK LP+ TY ++RGFC A + +EA +++ M++ G +P+ + Y+ +
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366
Query: 262 VSNLRNAGKLAEAHEVIRHMVEK 284
V+ A + EA E I+ M+ +
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIAR 389
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 132/255 (51%), Gaps = 6/255 (2%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P ++ I+ Q K +++M E AP+ TYN+V+ + + +
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYE 62
Query: 102 LLDEM--GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMD 158
+L EM G+S +PD TY+ +++ K + A +L M G P V+ +T+++D
Sbjct: 63 VLKEMRDGKS-VAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL- 217
GL R G +D EM KG PD ++ +IT + A ++++A L+ ++T
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+V TY ++I GFC +G ++A M+ ME R C PN + Y++L+ L AG L +A ++
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 278 IRHMVEKGKYIHLVS 292
R M KG ++V+
Sbjct: 242 FRRMTSKGCVPNVVT 256
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 111/240 (46%), Gaps = 1/240 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y ++H L + + +M+ PD ++YN ++ RLG++++ +L
Sbjct: 252 PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQL 311
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK-EVGFDPSVLHFTTLMDGLS 161
EM PD TY L+ + A LL +MK G DP V+ ++ ++ G S
Sbjct: 312 FKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYS 371
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
RA F EM + P+ V Y+ +I AG ++ A ++ M+ K P+V
Sbjct: 372 RAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVG 431
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+NS+I C G DEA ++ M + G P + Y TL+ G++ A+E+ M
Sbjct: 432 TFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVM 491
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 14/296 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M P ++N L+ C G + A+++ + P + +Y ++
Sbjct: 280 MTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCL---PDRITYTCLVRGFCN 336
Query: 58 IRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + ++ + M + G PD++TY+IV+ R + + + EM +P+
Sbjct: 337 ASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV 396
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+ L+ L K + A+ +L +M +PSV F +++ L R G++D M
Sbjct: 397 TYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 456
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM-------ITKGQLPNVFTYNSMIRG 229
A G P +V YT ++ + G +E A +LF+ M + L ++++IRG
Sbjct: 457 AAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRG 516
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C A + D+A +++E+ SR C P +V L AG+ EA ++I + + G
Sbjct: 517 LCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 135/253 (53%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H+ + + +L + V+ ++ G P ++++N +M +LG L++ RL + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++AQDL D MI KG P+ FTY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
E G Y ++++F
Sbjct: 379 PEIGTYTMIINEF 391
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G P++
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G P+V T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 77/189 (40%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +M +G PD TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G P VV
Sbjct: 409 RDGYKPSVV 417
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ L+ C GE A K++ R I+ + + RP YN I+ L
Sbjct: 228 VVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLL-RMIEDR--STRPDVVMYNTIIDGLCK 284
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Y +M+ G PD++TY+ ++C G+L LL+EM +PD +T
Sbjct: 285 DKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYT 344
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ L K K A NLL M + G P+V+ ++TLMDG G + K F M
Sbjct: 345 YTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMV 404
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P V Y +MI +++A +L M+ K +PN TYNS+I G C +G+
Sbjct: 405 QTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRIT 464
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +MKE+ RG + + Y +L+ L L +A + M E+G
Sbjct: 465 SALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERG 512
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 134/276 (48%), Gaps = 3/276 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GEV + ++ + F+ + SY +L+ L I + + + + + D
Sbjct: 212 LCLKGEVKKSLHFHDKVVAQ---GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRST 268
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD++ YN ++ + +++ + EM G PD TY+ L+ + + A +
Sbjct: 269 RPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFS 328
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LLN M +P V +T L+D L + G L K M +G P+VV Y+ ++ Y
Sbjct: 329 LLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYC 388
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
GE+ A+ +F M+ P+V +YN MI G C DEA +++EM + PN +
Sbjct: 389 LVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTV 448
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN+L+ L +G++ A ++++ + +G+ +++
Sbjct: 449 TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVIT 484
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ ILI C G++ A+ ++ K +P +Y+ ++ + + + ++
Sbjct: 344 TYTILIDALCKEGKLKEAKNLLGVMTKE---GVKPNVVTYSTLMDGYCLVGEVHNAKQIF 400
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M P + +YNI++ + +D+ LL EM P+ TYN L+ L K
Sbjct: 401 HAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKS 460
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +AL+L+ + G V+ +T+L+DGL + NLD F +M +G P+ Y
Sbjct: 461 GRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTY 520
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I L+ AQ LF ++ KG +V+TYN MI G C G DEA M +ME
Sbjct: 521 TALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMED 580
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + + ++ +L + +A +++ M+ KG
Sbjct: 581 NGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 1/280 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP T++ LIC G + L N P +Y ++ AL + K +
Sbjct: 304 FPDVI-TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAK 362
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ M+ EG P+++TY+ +M +G++ ++ M ++ +P +YNI+++ L
Sbjct: 363 NLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGL 422
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
KG A+NLL M P+ + + +L+DGL ++G + + E+ ++G DV
Sbjct: 423 CKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADV 482
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ YT ++ L+KA LF M +G PN +TY ++I G C + A + +
Sbjct: 483 ITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQH 542
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +GC + YN ++ L G L EA + M + G
Sbjct: 543 ILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 106/212 (50%), Gaps = 6/212 (2%)
Query: 75 GYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
GY P+ + +M C K + K FH D++ GF + +Y LL+ L K +
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLHFH---DKVVAQGFQMNQVSYGTLLNGLCKIGET 253
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ LL +++ P V+ + T++DGL + ++ F+ EM ++G PDV+ Y+ +
Sbjct: 254 RCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTL 313
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + AG+L A L + M K P+V+TY +I C GK EA ++ M G
Sbjct: 314 ICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGV 373
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
PN + Y+TL+ G++ A ++ MV+
Sbjct: 374 KPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQ 405
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 35/251 (13%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P I+ + ++ + ++ L +M G PD T +IL++ + + +
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFS 188
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG---------------- 180
+L + ++G+ P+ + TTLM GL G + +F D++ +G
Sbjct: 189 VLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLC 248
Query: 181 -------------------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
PDVV Y +I + +A D + M ++G P+V
Sbjct: 249 KIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVI 308
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+++I GFC+AG+ A +++ EM + NP+ Y L+ L GKL EA ++ M
Sbjct: 309 TYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVM 368
Query: 282 VEKGKYIHLVS 292
++G ++V+
Sbjct: 369 TKEGVKPNVVT 379
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 104/255 (40%), Gaps = 41/255 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T++ L+ C GEV A+++ +++++ P SYN +++ L
Sbjct: 368 MTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV---NPSVCSYNIMINGLCK 424
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M + P+ +TYN ++ + G++ L+ E+ G D T
Sbjct: 425 GKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVIT 484
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF---- 173
Y LL L K A+ L MKE G P+ +T L+DGL + L + F
Sbjct: 485 YTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHIL 544
Query: 174 -------------------------------DEMANKGCMPDVVCYTVMITSYIAAGELE 202
+M + GC+PD V + ++I S E +
Sbjct: 545 VKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDEND 604
Query: 203 KAQDLFDGMITKGQL 217
KA+ L MI KG L
Sbjct: 605 KAEKLLHEMIAKGLL 619
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++ N M + PS++ F ++ L + + +M KG PD+V +++I
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ + + ++ G PN ++++G C+ G+ ++ ++ ++G
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N + Y TL++ L G+ A +++R M+E
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLR-MIE 264
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 146/293 (49%), Gaps = 6/293 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E A T + LI C G A V++ ++ + P +Y +L A
Sbjct: 153 ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCV---PDVVTYTILLEATCKRS 209
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YK + +M D+G PDI+TYN+V+ + G++D L + G P+ +YN
Sbjct: 210 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 269
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I+L L ++ A L+ M + G P+V+ F L+ L R G ++ +++
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 329
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P+ + Y ++ ++ +++KA D M+++G P++ +YN+++ C +G+ D A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ +++ +GC P + YNT++ L AGK EA E++ MV KG +++
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 442
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 142/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N+++ + G +E + P SYN +L L +
Sbjct: 221 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +M +G P+++T+N+++ R G ++ +L+++ + G SP+ +YN
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH K K A+ L+ M G P ++ + TL+ L R+G +D ++ +KG
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I AG+ ++A +L + M++KG P++ TY+++ G C + ++A
Sbjct: 401 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 460
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ G PN ++YN ++ L + A ++ +M+ G
Sbjct: 461 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 505
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 119/252 (47%), Gaps = 7/252 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIE-WVYQQMSD-EGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +YNA++ G Q W ++ + + Y D L +C + G+
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDAYTCDTLIRG--LCGR---GRTANAL 180
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+LDEM R PD TY ILL K A+ LL+ M++ G P ++ + +++G+
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G +D F + + GC P+ V Y +++ A E A++L M KG PNV
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 300
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T+N +I C G + A +++++ GC+PN L YN L+ K+ +A +
Sbjct: 301 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDL 360
Query: 281 MVEKGKYIHLVS 292
MV +G Y +VS
Sbjct: 361 MVSRGCYPDIVS 372
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 41/254 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P TFN+LI C G V A +V+E+ K + P SYN +LHA
Sbjct: 291 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK---YGCSPNSLSYNPLLHAFCK 347
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ M G PDI++YN ++ A R G++D LL ++ G +P +
Sbjct: 348 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 407
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF---- 172
YN ++ L K K AL LLN M G P ++ ++T+ GL R + DA + F
Sbjct: 408 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 467
Query: 173 ------------------------------FDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F M GCMP+ YT++I G ++
Sbjct: 468 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 527
Query: 203 KAQDLFDGMITKGQ 216
+A+DL D + ++G+
Sbjct: 528 EARDLLDELCSRGE 541
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 8/102 (7%)
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD +I A+G +A+ + P+V YN+M+ G+C AG+ D A
Sbjct: 96 PDAGTCAALIKKLSASGRTAEARRVLAACG-----PDVMAYNAMMAGYCGAGQVDAARRW 150
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E R + +TL+ L G+ A A V+ M+ +
Sbjct: 151 CAE---RAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRR 189
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 139/277 (50%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G A V++ ++ P +Y +L A YK +
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCV---PDVVTYTILLEATCKRSGYKQAVKLL 210
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M D+G APDI+TYN+V+ + G++D L + G P+ +YNI+L L
Sbjct: 211 DEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTA 270
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
++ A L+ M G P+V+ F L+ L R G ++ D++ GC P+ + Y
Sbjct: 271 ERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ ++ ++++A + M++ G P++ +YN+++ C G+ D A ++ +++
Sbjct: 331 NPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 390
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC P + YNT++ L AGK EA E++ MV KG
Sbjct: 391 KGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKG 427
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIR 59
M + G T+N+++ + G +E F+KS + P SYN +L L
Sbjct: 213 MRDKGCAPDIVTYNVVVNGICQEGRVDDAME-FLKSLPSYGCEPNTVSYNIVLKGLCTAE 271
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+++ E + +MS +G P+++T+N+++ R G ++ +LD++ + G +P+ +YN
Sbjct: 272 RWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+LH K K A+ + M G P ++ + TL+ L R G +DA ++ +K
Sbjct: 332 PILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P ++ Y +I AG+ E+A +L + M+TKG P++ TY+++ G C G+ +EA
Sbjct: 392 GCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ G PN ++YN ++ L A ++ +MV G
Sbjct: 452 IKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNG 497
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 11/276 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G AR+V L + P SYNA++ Q + M E
Sbjct: 100 LCASGRTAEARRV--------LASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME-- 149
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD TYN ++ G+ D +LD+M R G PD TY ILL K A+
Sbjct: 150 -PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL+ M++ G P ++ + +++G+ + G +D F + + GC P+ V Y +++
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLC 268
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A E A+ L M KG+ PNV T+N +I C G + A ++ ++ GC PN L
Sbjct: 269 TAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSL 328
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN ++ K+ A + MV G Y +VS
Sbjct: 329 SYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVS 364
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 117/257 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G P TFN+LI GL +E + + P SYN ILHA ++
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M G PDI++YN ++ A R G++D LL ++ G +P +YN
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K AL LLN M G P ++ ++T+ GL R G ++ F ++ + G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y ++ A DLF M++ G +PN TY +I G G EA
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522
Query: 241 TMMKEMESRGCNPNFLV 257
MM E+ SRG LV
Sbjct: 523 EMMAELCSRGVVSKTLV 539
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TA T+N LI C G + +A ++ ++ L P ++YN ++HAL
Sbjct: 287 MKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLM---PTVSTYNMLIHALFL 343
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++MS++G PD +TYNI++ R G + + L DEM G P T
Sbjct: 344 DCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++VL K + A +L + G P ++ F L+DG GN+D EM
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+PD V + ++ G++E A++L + M ++G P+ +YN++I G+ G
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + EM S G NP L YN L+ L + A ++++ M+ KG
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKG 571
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 134/284 (47%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N +I C+ G V AR + F K +P +Y + + + +
Sbjct: 221 GIKPNVVTYNTIIHGYCSRGRVEGARMI---FDLMKCRGVKPDSYTYGSFISGMCKEGKL 277
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + ++M + G P +TYN ++ G L+ D+M R G P TYN+L
Sbjct: 278 EEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNML 337
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L K A ++ M E G P + + L++G R GN+ DEM +KG
Sbjct: 338 IHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGI 397
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P V YT +I G +++A DLF+ ++ KG P++ +N++I G C G D A
Sbjct: 398 QPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFA 457
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+KEM+ P+ + +NTL+ GK+ A E+I M +G
Sbjct: 458 MLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRG 501
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 124/245 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N +++ L + K + M G P+++TYN ++ G+++ + D M
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD +TY + + K K A +L MKE+G P+ + + TL+DG GNL
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + D+M +G MP V Y ++I + ++++A + M KG +P+ TYN +
Sbjct: 313 EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I G+C G +A T+ EM S+G P + Y +L+ L G++ +A ++ +V KG
Sbjct: 373 INGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGI 432
Query: 287 YIHLV 291
+ L+
Sbjct: 433 FPDLI 437
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 135/299 (45%), Gaps = 15/299 (5%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+++LI C E+ E F K P ++ N +L L + + +Y +M
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183
Query: 73 DEGYAPDILTYNI---VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++T+NI V+C + +L K +F L++ +G P+ TYN ++H
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG---IKPNVVTYNTIIHGYCSRG 240
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A + + MK G P + + + G+ + G L+ ++M G P V Y
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I Y G LE A D D M+ +G +P V TYN +I + K DEA ++KEM +
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG---------KYIHLVSKFKRYKR 299
G P+ + YN L++ G + +A + M+ KG I+++SK R K+
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQ 419
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++I + + A + FD M KG +P+V N M+ F + + ++A + E
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
M + + +N +++ L GKL +A E I
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFI 214
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 141/292 (48%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
++E+G A T+N LI C G++ A +++ R I + +F +YN ++H
Sbjct: 313 LLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVF-------TYNLLIH 365
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL ++ + E + ++M ++G PD++TYNI + R G + L DEM P
Sbjct: 366 ALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRP 425
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TY L+ V GK ++ A + G P ++ F L+DG GN+D
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM N +PD V + ++ Y ++E+A+ L D M +G P+ +YN++I G+
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKR 545
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G +A + EM S G +P L YN L+ G+ A E++R M KG
Sbjct: 546 GDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKG 597
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N +I C G+ A K+ F K N +P +YN+ + L R+
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKI---FKTMKDKNLKPDCYTYNSFISRLCKERRI 303
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V ++ + G P+ +TYN ++ G LD+ DEM G TYN+L
Sbjct: 304 EEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLL 363
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L + A +++ M+E G +P V+ + ++G R GN FDEM K
Sbjct: 364 IHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNI 423
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P V YT +I + + +A++ F I +G LP++ +N++I G C+ G D A
Sbjct: 424 RPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQ 483
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM++ P+ + +NTL+ K+ EA +++ M E+G
Sbjct: 484 LLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERG 527
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 3/263 (1%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
+ +A V E +K N + ++N +++ L ++K + M G P+++T
Sbjct: 198 IKMAWFVYEEMVK---MNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVT 254
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN V+ GK + ++ M PD +TYN + L K + A +L +
Sbjct: 255 YNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLL 314
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G P+ + + L+DG G+LD + DEM N+G + V Y ++I + +E
Sbjct: 315 ESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIE 374
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+D+ M KG P+V TYN I G+C G +A ++ EM + P Y +L+
Sbjct: 375 EAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLI 434
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+++EA E + +++G
Sbjct: 435 DVFGKRNRMSEAEEKFKKSIKEG 457
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+EM + T+NI++++L + K A + + HM+ G P+V+ + T+++G
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G +A F M +K PD Y I+ +E+A + ++ G +PN TY
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I G C G D+A EM +RG + YN L+ L ++ EA ++I+ M E
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385
Query: 284 KGKYIHLVS---KFKRYKRC 300
KG +V+ + Y RC
Sbjct: 386 KGVEPDVVTYNIQINGYCRC 405
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 6/244 (2%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K+ +VY++M I+T+NI++ R GK + + M G P+ TYN +
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K AA + MK+ P + + + L + ++ ++ G
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P+ V Y +I G+L+KA D M+ +G + +VFTYN +I + + +EA
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAED 378
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFK 295
M+KEM +G P+ + YN ++ G +A + MVEK Y L+ F
Sbjct: 379 MIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFG 438
Query: 296 RYKR 299
+ R
Sbjct: 439 KRNR 442
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 8/210 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLG- 57
M+E T T+ LI G+ + E+F KS P +NA++ H + G
Sbjct: 418 MVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGN 477
Query: 58 -IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R ++L+ ++M + PD +T+N +M R K+++ +LLDEM G PD
Sbjct: 478 IDRAFQLL----KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHI 533
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+YN L+ K AL + + M +GFDP++L + L+ G S+ G D + EM
Sbjct: 534 SYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREM 593
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
+KG PD Y +I + +L + D
Sbjct: 594 QSKGITPDDSTYLYVIEAMKTNDDLVENDD 623
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 16/239 (6%)
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRL-GKLDQFHRLLDEMGRSGFSPDFH----- 116
L+E + + + D+ T I +C YRL FH L + + + F+
Sbjct: 79 LVETLLSHLHRHPHCLDLNTRCITLCILYRLPSPKPSFHILQPILHTTTPTVIFNELSLA 138
Query: 117 ----------TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+++LL + KP AL LN MKE P +L+ L + +
Sbjct: 139 RNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKI 198
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ ++EM +V + +MI G+ +KA+D M G PNV TYN++
Sbjct: 199 KMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+C+ GKF+ A + K M+ + P+ YN+ +S L ++ EA V+ ++E G
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 94/205 (45%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L +++++ A + K D+ L+ M + P T N LL +L K +K A +
Sbjct: 148 LVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEE 207
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M ++ S++ F +++ L R G K F M G P+VV Y +I Y G+
Sbjct: 208 MVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGK 267
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
E A +F M K P+ +TYNS I C + +EA ++ ++ G PN + YN
Sbjct: 268 FEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNA 327
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ N G L +A M+ +G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRG 352
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 140/269 (52%), Gaps = 2/269 (0%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A +++ + S F P SYNA+L L R++ ++ + ++M G
Sbjct: 191 VCDQGPVDEAVRLLRDLLPS--FGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGC 248
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+I+T++ ++ R G ++ H + +M G +PD Y ++ + K ++ A
Sbjct: 249 PPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARG 308
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+LN M G P+V+ + TL+ GL A + + EM +K C D V + +++
Sbjct: 309 ILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLC 368
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G +++ ++ + M+ G +P+V TY ++I GFC G DEA +++ M + GC PN +
Sbjct: 369 QNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTV 428
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y ++ L +A + +A E++ M+++G
Sbjct: 429 SYTIVLKGLCSAERWVDAEELMSQMIQQG 457
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P TF+ LI GL +V E + P Y I+ + +
Sbjct: 243 MVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M G +P+++ YN ++ + ++ LL EM D T+NI
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + +L M E G P V+ +TT+++G + G +D MA G
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ V YT+++ +A A++L MI +G PN T+N++I C G ++A
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++K+M GC+P+ + Y+T++ L AG EA E++ MV+KG
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 136/298 (45%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVIN---GFCK 404
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + M+ G P+ ++Y IV+ + L+ +M + G P+ T
Sbjct: 405 EGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVT 464
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AGN D + M
Sbjct: 465 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMV 524
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+ + Y+ + ++ G + K +F+ + + YN++I C G+ D
Sbjct: 525 KKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETD 584
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A + M S GC PN Y L+ L + G + EA E++ + KG HL+ F
Sbjct: 585 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALRKHLMKHF 642
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 131/274 (47%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G R + +I C + +AR ++ R + P YN +L L
Sbjct: 278 MAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPS---YGLSPNVVCYNTLLKGLCS 334
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D+ D +T+NI++ + G +D+ +L++M G PD T
Sbjct: 335 ADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVIT 394
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL A + +M
Sbjct: 395 YTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMI 454
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC P+ V + +I G +E+A +L M+ G P++ +Y+++I G AG D
Sbjct: 455 QQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTD 514
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M +G +PN ++Y+++ S L G++
Sbjct: 515 EALELLNVMVKKGMSPNTIIYSSIASALSGEGRI 548
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 1/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y ++ AL + V M+ G AP Y++ + A R +
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168
Query: 103 LDEMGRSGFSPDFHTYNILLH-VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L ++ G + D N++L V +G A L + + G +P V+ + ++ GL
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
A + +EM GC P++V ++ +I G E+ ++ M G P+V
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y ++I G C + + A ++ M S G +PN + YNTL+ L +A + EA ++ M
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348
Query: 282 VEK 284
+K
Sbjct: 349 FDK 351
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y M+ Y AG+L A+ L + PN +TY ++R C G+ +A ++ +M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVPVA---PNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RGC P +Y+ + A A V+R + +G
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRG 176
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ G P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYX 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M++EM S G P Y +++ G + ++++ M G +V+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ + + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 1/280 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KLIE 65
P TFNILI VG K E F + F P +YN ++ L + + +
Sbjct: 195 PPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACD 254
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ + S +PD++TY ++ +LGKL+ L +EM RSG P T+N+L+
Sbjct: 255 LLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGF 314
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
GK +AA + M P V+ FT+L+DG R G++ +D M + P++
Sbjct: 315 GKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNI 374
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y+V+I + + +A+DL + P F YN +I GFC AG DEA ++ E
Sbjct: 375 YTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTE 434
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
ME + C P+ + + L+ G++ EA ++ + M+ G
Sbjct: 435 MEEKRCRPDKVTFTILIIGHCMKGRMVEALDIFKKMLAIG 474
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 137/274 (50%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N L+ + G + + F ++ F+ P ++N ++ L + + + ++ M
Sbjct: 165 VYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAM 224
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDK 130
G PD++TYN ++ + +LD+ LL E+ R+ SPD TY ++ K K
Sbjct: 225 QSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGK 284
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA L M G +P+V+ F L+DG + GN+ A + ++MA+ C+PDVV +T
Sbjct: 285 LEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTS 344
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I Y G++ ++D M + PN++TY+ +I C + EA ++++++
Sbjct: 345 LIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSD 404
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P +YN ++ AG + EA+ ++ M EK
Sbjct: 405 VFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEK 438
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 109/237 (45%), Gaps = 1/237 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y ++ +L + + L+E V M +G+ D ++ + + GK D +L+ E
Sbjct: 94 STYELLIRSLCQMGLHDLVEMVIGYMRSDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIE 153
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ YN LL+ L KG K A+ L P+ F L+ GL R G
Sbjct: 154 VQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGE 213
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYN 224
++ F+ M + GC+PDVV Y +I+ A EL++A DL + ++ P+V TY
Sbjct: 214 VEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYT 273
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
S+I GF GK + A + +EM G P + +N L+ G + A + M
Sbjct: 274 SIISGFRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKM 330
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G++ A + E I+S + P ++N ++ I E ++++M+ PD+
Sbjct: 283 GKLEAASVLFEEMIRSGI---EPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDV 339
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+T+ ++ R G + ++ D M SP+ +TY+++++ L K ++ A +LL
Sbjct: 340 VTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQ 399
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+K P + ++DG +AGN+D EM K C PD V +T++I + G
Sbjct: 400 LKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKGR 459
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+ +A D+F M+ G P+ T +S++ AGK EA
Sbjct: 460 MVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEA 498
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 13/192 (6%)
Query: 115 FHTYNILLHVLGK-GDKPLAALNLLNHMKEVG--FDPSVLHFTTLMDGLSRAGNLDACKY 171
F TY +L+ L + G L + ++ +M+ G D VL F L+ ++AG D K
Sbjct: 93 FSTYELLIRSLCQMGLHDLVEM-VIGYMRSDGHLIDSRVLGF--LVTSFAQAGKFDLAKK 149
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
E+ + Y ++ + G++ +A LF + PN +T+N +IRG C
Sbjct: 150 LIIEVQGEEARISSFVYNYLLNELVKGGKVHEAIFLFKENLAFHSPPNTWTFNILIRGLC 209
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------ 285
G+ ++ + M+S GC P+ + YNTL+S L A +L A ++++ + +
Sbjct: 210 RVGEVEKGFELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDV 269
Query: 286 -KYIHLVSKFKR 296
Y ++S F++
Sbjct: 270 MTYTSIISGFRK 281
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 1/222 (0%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+E + +Q+ E Y PD++TY I++ A + Q +LLDEMG G PD TYN+L++
Sbjct: 1 MEVLDRQLEKECY-PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN 59
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ K + A+ LN M G P+V+ ++ + G + EM KGC P
Sbjct: 60 GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
VV + ++I G L +A D+ + M T G PN +YN ++ GFC K D A +
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M SRGC P+ + YNT+++ L GK+ A E++ + KG
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKG 221
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 116/216 (53%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M G PD++TYN+++ + G+LD+ + L+ M G P+ T+NI+L +
Sbjct: 41 EMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTG 100
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ + A LL M G PSV+ F L++ L R G L ++M GC P+ + Y
Sbjct: 101 RWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYN 160
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ + ++++A + M+++G P++ TYN+M+ C GK D A ++ ++ S+
Sbjct: 161 PLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSK 220
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC+P + YNT++ L GK +A E++ M KG
Sbjct: 221 GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKG 256
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 113/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M G P+ L+YN ++ + K+D+ + L+ M G PD TYN +L L
Sbjct: 143 ILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALC 202
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K AA+ LLN + G P ++ + T++DGLS+ G D EM KG PDV+
Sbjct: 203 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVI 262
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I G++E+A F + G PN FTYNS++ G C A + D A + M
Sbjct: 263 TYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYM 322
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S+GC P + Y L+ + N G EA E++ + +G
Sbjct: 323 ISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 119/250 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + TFNILI GL + ++ K P SYN +LH ++
Sbjct: 112 MVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKK 171
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M G PDI+TYN ++ A + GK+D LL+++ G SP TYN
Sbjct: 172 MDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNT 231
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A+ LL+ M+ G P V+ +++L+ GLSR G ++ FF ++ G
Sbjct: 232 VIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFG 291
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ Y ++ A + ++A D MI+KG P +Y +I G G EA
Sbjct: 292 VKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEAL 351
Query: 241 TMMKEMESRG 250
++ E+ SRG
Sbjct: 352 ELLNELCSRG 361
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 89/180 (49%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
PD TY IL+ A+ LL+ M G P V+ + L++G+ + G LD F
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+ M + G P+V+ + +++ S + G A+ L M+ KG P+V T+N +I C
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G A ++++M + GC PN L YN L+ K+ A + + MV +G Y +V+
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ D + K P+V TY +I C +A ++ EM SRGC P+ + YN LV+ +
Sbjct: 2 EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G+L EA + + M G ++++
Sbjct: 62 CKEGRLDEAIKFLNSMPSYGSQPNVIT 88
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 129/247 (52%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F P SYNA+L L +++ ++ + ++M P+I+T+N ++ R G ++
Sbjct: 221 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
H +L +M G +PD Y ++ + K A +LN M G P+V+ + TL+
Sbjct: 281 VHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL A + + EM +K C D V + +++ + G +++ +L + M+ G +P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMP 400
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TY ++I GFC G DEA ++K M + GC PN + Y ++ L +A + +A +++
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460
Query: 279 RHMVEKG 285
M+++G
Sbjct: 461 SQMIQQG 467
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 6/305 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN LI GL +V E + P Y I+ +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH 312
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K+ + +M G P+++ YN ++ + ++ LL EM D T+NI
Sbjct: 313 LKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + LL M G P V+ +TT+++G + G +D M G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + YT+++ +A A+DL MI +G N T+N++I C G ++A
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK------YIHLVSKF 294
++K+M GC+P+ + Y+T++ L AGK EA E++ MV KG Y + S
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 295 KRYKR 299
R R
Sbjct: 553 SREGR 557
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 134/274 (48%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G R + +I C G + +A +++ R + +P YN +L L
Sbjct: 288 MAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPS---YGLKPNVVCYNTLLKGLCS 344
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D+ D +T+NI++ + G +D+ LL++M G PD T
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVIT 404
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL A + +M
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC + + + +I G +E+A +L M+ G P++ +Y+++I G AGK D
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ S L G++
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 136/298 (45%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + + P +Y +++ G +
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVIN---GFCK 414
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + M+ G P+ ++Y IV+ + L+ +M + G + T
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AG D + M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + ++ G + K +FD + + YN++I C G+ +
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A + M S GC PN Y L+ L + G + EA E++ + KG HL+ F
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHF 652
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + A V++ + P Y+ IL A ++ V + + G
Sbjct: 132 LCARGRIADALAVLDEMPRRGCAPIPPM---YHVILEAACRGGGFRSAVRVLEDLHARGC 188
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
A D+ N+V+ A G +D+ LL ++ G PD +YN +L L +
Sbjct: 189 ALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE 248
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M + P+++ F TL+ L R G + +MA GC PD+ Y +I
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGIC 308
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G L+ A ++ + M + G PNV YN++++G C A +++E ++ EM + C + +
Sbjct: 309 KEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 368
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N LV G + E++ M+ G
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLVHG 397
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ TY V+ A G++ +LDEM R G +P Y+++L +G +A+ +
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + G V + +++ + G++D + ++ + GC PDVV Y ++
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A Q+L + M+ PN+ T+N++I C G F+ ++ +M GC P+ +
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRM 299
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G L AHE++ M G
Sbjct: 300 YATIIDGICKEGHLKVAHEILNRMPSYG 327
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 97/203 (47%), Gaps = 3/203 (1%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ R G+L+ RL + P+ +TY ++ L + AL +L+ M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + +++ R G + +++ +GC DV +++ + G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA L + + G P+V +YN++++G CMA ++ +M+EM C PN + +NTL+
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
S L G HEV+ M E G
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHG 292
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 109/211 (51%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G AP + YN ++ + + GKLD+ L + MG G P+ TY+IL+ K K A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L+ L M EVG +V +++L+ G + G L A K FDEM G P+VV YT +I+
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
Y GEL A L+ M KG PN +T+ ++I G C A + EA + EM PN
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN L+ G A E++ MVEKG
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLAR--KVVERFIKSKLFNFRPFK---NSYNAILHAL 55
M +G + T+N+ I GL + +V E L +++ + +Y ++ L
Sbjct: 241 MESSGCDLSVATYNVFI-----RGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGL 295
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ +++ E + +M + G+ P + ++ + G + L++++ + G +P
Sbjct: 296 CKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSL 355
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
YN L++ + K K A +L N+M G P+ + ++ L+D + G LD +F +
Sbjct: 356 FVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGK 415
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G V Y+ +I+ + G+L A+ LFD MI G PNV Y S+I G+C G+
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGE 475
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + EM +G +PN + L+S L +A ++AEA+++ MVE
Sbjct: 476 LHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 141/329 (42%), Gaps = 41/329 (12%)
Query: 1 MIENGF-PTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE GF P+ A N++ + G +G A +V K K F P YNA+++++
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVN---KVKKFGVAPSLFVYNALINSMCK 367
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAK------------------------ 90
+ E ++ M +G P+ +TY+I++ C +
Sbjct: 368 DGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427
Query: 91 --------YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+LGKL L DEM +G P+ Y L+ K + A L + M
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P+ FT L+ GL A + F EM +P+ V Y V+I + G
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A +L D M+ KG +P+ +TY +I G C G+ EA M +++ N + ++ L+
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G+L +A + R M+ +G + LV
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLV 636
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 119/240 (49%), Gaps = 2/240 (0%)
Query: 47 SYNAILHALL-GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN + L R ++ +E + +S +G D+ TY ++ ++ + + +++E
Sbjct: 252 TYNVFIRGLCKNQRVWEAVE-IKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M GF P + L+ L K +A +L+N +K+ G PS+ + L++ + + G
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD + F+ M +KG P+ V Y+++I S+ G+L+ A M G V+ Y+S
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSS 430
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G C GK A ++ EM + G PN ++Y +L+S G+L A + M KG
Sbjct: 431 LISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKG 490
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 111/243 (45%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + + +L+ L+ IRQ+++ ++ ++ G PD+ Y V+ + L + +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M SG TYN+ + L K + A+ + N + G V + TL+ GL +
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+A + +EM G +P + ++ G + A DL + + G P++F
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I C GK DEA ++ M +G PN + Y+ L+ + GKL A + M
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417
Query: 283 EKG 285
E G
Sbjct: 418 EVG 420
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 135/287 (47%), Gaps = 15/287 (5%)
Query: 6 FPTTARTFNILI---CTCGEVGLAR----KVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
FP T++ILI C G++ +A K+ E IK+ ++ Y++++ +
Sbjct: 387 FPNDV-TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVY-------PYSSLISGHCKL 438
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + ++ +M G P+++ Y ++ + G+L RL EM G SP+ +T+
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ L ++ A L M E P+ + + L++G + GN DEM
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG +PD Y +I+ + G + +A++ + + + Q N +++++ G+C G+ D+
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDD 618
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +EM RG + + Y+ L+ + ++++ M ++G
Sbjct: 619 ALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG 665
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 1/236 (0%)
Query: 27 RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV 86
R +++ + RP Y ++ A K+ ++ M EG P+++TY +
Sbjct: 652 RSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTAL 711
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+ ++G +D+ L EM S P+ +TY L L A+ L + + E GF
Sbjct: 712 INGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GF 770
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
+ + + L+ G + G + M + G PD + Y+ +I Y G+L++A
Sbjct: 771 LANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIK 830
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
L++ M+ +G P+ YN +I G C+ G+ +A + +M RG PN YN+L+
Sbjct: 831 LWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 44/319 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI NG + LI C GE+ A ++ + P ++ A++ L
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI---SPNTYTFTALISGLCH 507
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M + P+ +TYN+++ + G + LLDEM G PD +T
Sbjct: 508 ANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYT 567
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD----ACKY-- 171
Y L+ L + A +N ++ + + F+ L+ G + G LD AC+
Sbjct: 568 YRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREML 627
Query: 172 -----------------------------FFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+M ++G PD V YT MI + AG L+
Sbjct: 628 GRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLK 687
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A L+D M+++G LPNV TY ++I G C G D+A + +EM + PN Y +
Sbjct: 688 MAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 747
Query: 263 SNLRNAGKLAEA---HEVI 278
L + G + +A H+V+
Sbjct: 748 DYLTSEGNIEKAIQLHDVL 766
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 114/238 (47%), Gaps = 1/238 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y+ +++ +L + + I + +QM D+G PD + Y ++ A + G L L D M
Sbjct: 638 YSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMV 697
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G P+ TY L++ L K A L M P+ + +D L+ GN++
Sbjct: 698 SEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 757
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
D + +G + + V Y ++I + G +++A ++ MI G P+ +Y+++I
Sbjct: 758 KAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+C G EA + + M +RG NP+ + YN L+ G+L +A E+ M+ +G
Sbjct: 817 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 131/295 (44%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T ++ LI C G++ A+ + + I + L +P Y +++
Sbjct: 416 MTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGL---KPNVVIYTSLISGYCK 472
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M+ +G +P+ T+ ++ ++ + ++L EM P+ T
Sbjct: 473 EGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVT 532
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+ K + A LL+ M E G P + L+ GL G + + F +++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +C++ ++ Y G L+ A D M+ +G ++ Y+ +I G
Sbjct: 593 GEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRR 652
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++K+M +G P+ ++Y T++ AG L A + MV +G ++V+
Sbjct: 653 SIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVT 707
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 7/193 (3%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQF 99
P +Y A+++ L I E + ++M P+ TY + ++ + K Q
Sbjct: 703 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL 762
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
H +L E GF + TYNIL+ K + A +L +M + G P + ++T++
Sbjct: 763 HDVLLE----GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 818
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
R G+L ++ M N+G PD V Y +I GEL KA +L D M+ +G PN
Sbjct: 819 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 878
Query: 220 VFTYNSMIRGFCM 232
TYNS+I G C+
Sbjct: 879 RATYNSLIHGTCL 891
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 103/226 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + M D G P I T + V+ R+ + L DE+ SG PD + Y ++ L
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A ++ M+ G D SV + + GL + + + ++ KG DV
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ E E +++ + MI G +P+ ++++ G G A ++ ++
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G P+ VYN L++++ GKL EA + +M KG + + V+
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVT 392
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 1/187 (0%)
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
F LD + FS +++L+ + + L L ++ M + G P + + +++
Sbjct: 130 FESFLDSYRKCNFSTTL-GFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLN 188
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL R + FDE+ + G PDV YT ++ S + +A+++ M + G
Sbjct: 189 GLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDL 248
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TYN IRG C + EA + + +G + Y TLV L + E++
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308
Query: 279 RHMVEKG 285
M+E G
Sbjct: 309 NEMIEFG 315
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF T+NILI C G + A +V+ I S + P SY+ I++
Sbjct: 769 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI---SPDCISYSTIIYEYCRRGDL 825
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K +++ M + G PD + YN ++ G+L + L D+M R G P+ TYN L
Sbjct: 826 KEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885
Query: 122 LH 123
+H
Sbjct: 886 IH 887
>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
Length = 793
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 139/291 (47%), Gaps = 10/291 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKS--KLFNFRPFKNSYNAILHAL 55
M E G T+N LI C G V A +++ ++S K+ F + N +L+ L
Sbjct: 411 MTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTF-----TLNTLLYNL 465
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++Y+ E + + G+ PD ++Y VM A ++ K + L DEM + +P
Sbjct: 466 CKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSI 525
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ L K A++ LN + E+G P + ++ + G+L+ F ++
Sbjct: 526 STYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNK 585
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PDVV ++ G LEKA LF+ + KG+ +V TYN++I+ C
Sbjct: 586 MVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDND 645
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
D A +ME RG P+ YN L+S L AG+ EA +++ + E GK
Sbjct: 646 VDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGK 696
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 145/320 (45%), Gaps = 42/320 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C G +G AR ++ R K + P + +YN ++ A +
Sbjct: 239 GLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIV---PTRATYNTLVSAYARLGWI 295
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDFHTYNI 120
K V + M+ G+ PD+ TYN++ + GK+D+ +L DEM + G SPD TYN
Sbjct: 296 KQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNT 355
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + ALNLL M+E G S++ ++ GL R G L+ + M +G
Sbjct: 356 LVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEG 415
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y +I + AG + KA L D M+ G + FT N+++ C +++EA
Sbjct: 416 LTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAE 475
Query: 241 TMMK-----------------------------------EMESRGCNPNFLVYNTLVSNL 265
+++ EM R P+ YNTL+ L
Sbjct: 476 ELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGL 535
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
GKL EA + + ++E G
Sbjct: 536 STMGKLTEAIDKLNELMEMG 555
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 127/275 (46%), Gaps = 1/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN+L+ T G + K + F P +YN +L+A + +M
Sbjct: 211 TFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARM 270
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
EG P TYN ++ A RLG + Q +++ M GF PD TYN+L L + K
Sbjct: 271 KKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 330
Query: 132 LAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L + M+++G P V+ + TL+D + +EM KG +V + +
Sbjct: 331 DEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNI 390
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ G+LE+A + M +G P+V TYN++I C AG +A +M EM G
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ NTL+ NL + EA E++R ++G
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRG 485
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 106/222 (47%), Gaps = 11/222 (4%)
Query: 78 PDILTYNIVMCAKYR------LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
P + N V+ A R LD FH L+ P+ +T+N+L+H
Sbjct: 170 PSLQAANAVLSALARSPSTSPQASLDAFHSLI----ALRLHPNHYTFNLLVHTHCSKGTL 225
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL+ L+ M+ G P + + TL++ R G L + M +G +P Y +
Sbjct: 226 ADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTL 285
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG- 250
+++Y G +++A D+ + M G P+++TYN + G C AGK DEA + EME G
Sbjct: 286 VSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGI 345
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+P+ + YNTLV + ++A ++ M EKG LV+
Sbjct: 346 VSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVT 387
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 131/280 (46%), Gaps = 17/280 (6%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMC 88
+ IK KL P ++YN ++ L + KL E + ++ + G PD TYNI++
Sbjct: 514 DEMIKRKL---TPSISTYNTLIKGLSTMG--KLTEAIDKLNELMEMGLVPDDTTYNIIIH 568
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
A + G L++ + ++M + F PD T N L++ L + A+ L E G
Sbjct: 569 AYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKV 628
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
V+ + TL+ L + ++D FF +M +G PDV Y V++++ AG +AQ +
Sbjct: 629 DVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKML 688
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP--NFLVYNTLVSNLR 266
+ G+L F Y S I+ A + + + ++ES G + YN + L
Sbjct: 689 HKLNESGKLYGRFFYPS-IKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELC 747
Query: 267 NAGKLAEAHEVIRHMVEKG------KYIHLVSKF-KRYKR 299
G+L EA V+ M++KG YI L+ KR KR
Sbjct: 748 IGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQKR 787
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 133/244 (54%), Gaps = 2/244 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y+ ++ L + + + M G +PD++TY I++ + K+ +
Sbjct: 189 PNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEV 248
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM +G P+ TYN LLH L + + AL L+ M G P+V+ + TL+DGL +
Sbjct: 249 LREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 308
Query: 163 AGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G + DAC D M +KG PD++ Y ++I A +++++ L ++ G P+V
Sbjct: 309 VGRVKDACAMLAD-MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 367
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+S+I G C + + DEAC ++ ++SRGC P+ ++Y+TL+ L AGK+ EA ++ M
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 427
Query: 282 VEKG 285
G
Sbjct: 428 AGDG 431
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 121/260 (46%), Gaps = 42/260 (16%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ M G D + Y ++ ++ +LDQ +L EM G P+ TYN L+ L K
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN--------- 178
++P A L HMK V PS++ + TL+DGL R G L+ F EM +
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 179 ---------------------------------KGCMPDVVCYTVMITSYIAAGELEKAQ 205
+GC PDV+ YT+++ ++ A
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ M+ G +PN+ TYNS++ G C A + +A +M++M RGC PN + Y TL+ L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G++ +A ++ M++KG
Sbjct: 307 CKVGRVKDACAMLADMIDKG 326
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 148/285 (51%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ IL+ C +V A +V+ + + P +YN++LH L
Sbjct: 217 MKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV---PNLVTYNSLLHGLCR 273
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + + M+ G P+++TY ++ ++G++ +L +M G +PD
Sbjct: 274 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 333
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEM 176
YN+L++ L K D+ ++ LL G P V+ +++++ GL R+ LD AC+ +
Sbjct: 334 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL-YV 392
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++GC PDV+ Y+ +I AG++++A DL++ M G +V TY+++I G C AG+
Sbjct: 393 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRV 452
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
DEA ++ M G P+ + YN+L+ L + L EA E++ M
Sbjct: 453 DEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 124/240 (51%), Gaps = 3/240 (1%)
Query: 26 ARKVVERFIKSKLFNFR---PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
AR+V + + R P +Y ++ L + + K + M D+G PD++
Sbjct: 274 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 333
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN+++ + ++D+ LL G PD TY+ +++ L + ++ A LL ++K
Sbjct: 334 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 393
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P V+ ++TL+DGL +AG +D ++ MA GC DVV Y+ +I AG ++
Sbjct: 394 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVD 453
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L M+ G P+ TYNS+I+G C DEA +++EME C P+ + YN L+
Sbjct: 454 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 126/258 (48%), Gaps = 7/258 (2%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +Y A+L + + + +M + P++ +I++ + + R
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
M SG D Y LL L K + AL +L+ M++ G +P+V+ + +L+DGL
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ----- 216
+ D + F+ M + C P +V Y ++ G+LE+A LF M+ +
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185
Query: 217 --LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PNV TY+ +I G C A + +A +++ M++RGC+P+ + Y LV L K+A A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245
Query: 275 HEVIRHMVEKGKYIHLVS 292
EV+R M++ G +LV+
Sbjct: 246 WEVLREMLDAGCVPNLVT 263
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN +++ L Q + ++ G PD++TY+ V+ R +LD+ RLL +
Sbjct: 334 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 393
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G PD Y+ L+ L K K A +L M G D V+ ++TL+DGL +AG +D
Sbjct: 394 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVD 453
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
M G P + Y +I L++A +L + M P+ TYN +I
Sbjct: 454 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 513
Query: 228 RGFCMAGKFDEACTMMKEMESR-----GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
G C + D A ++++ ++R G + + Y++L+ L AG++AEA + + M+
Sbjct: 514 HGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMI 573
Query: 283 EKG 285
+ G
Sbjct: 574 DNG 576
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 16/296 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G +N+LI C +V + ++ R + +P +Y+++++ L
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG---GIKPDVVTYSSVIYGL-- 376
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R +L E + + G PD++ Y+ ++ + GK+D+ L + M G D
Sbjct: 377 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADV 436
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ L+ L K + A LL M +G PS + + +L+ GL +LD +E
Sbjct: 437 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 496
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK-----GQLPNVFTYNSMIRGF 230
M C P V Y ++I ++ A L + + G + Y+S+I G
Sbjct: 497 MERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGL 556
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE-AHEVIRHMVEKG 285
C AG+ EA +EM G P+ + Y+ L+ L+ + L E H V+ MV+ G
Sbjct: 557 CKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 35/136 (25%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA------- 233
C PDV Y ++ + GE+++AQ FD M +K +PNVF + +I G C A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 234 ----------------------------GKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ D+A ++ EM GC PN + YN+L+ L
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 266 RNAGKLAEAHEVIRHM 281
+ A E+ HM
Sbjct: 125 CKNNEPDRAQELFEHM 140
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ T L+ C V A +V++ ++ +RP +YNAI+ +L
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE---IGYRPDIVAYNAIIDSLCK 202
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ ++++ +G P+++TY ++ G+ + RLL +M + +P+ T
Sbjct: 203 TRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT 262
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ LL K K L A + M + DP ++ +++L++GL +D FD M
Sbjct: 263 YSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC PDVV Y +I + A +E LF M +G + N TYN++I+GF G D
Sbjct: 323 SKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVD 382
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +M+S G +P+ YN L+ L + G L +A + M + + +V+
Sbjct: 383 KAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVT 437
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 140/280 (50%), Gaps = 1/280 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP+ FN L+ ++ V+ K ++ R ++N +++ Q L
Sbjct: 82 FPSIV-DFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V +M GY PD +T ++ R ++ L+D+M G+ PD YN ++ L
Sbjct: 141 SVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSL 200
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + AL+ + G P+V+ +T L++GL +G + +M + P+V
Sbjct: 201 CKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNV 260
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y+ ++ +++ G++ +A+++F+ M+ P++ TY+S+I G C+ + DEA M
Sbjct: 261 ITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S+GC P+ + YNTL++ A ++ + ++ R M ++G
Sbjct: 321 MVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 156/316 (49%), Gaps = 24/316 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLAR----KVVERFIKSKLFNF------------ 41
++ENG P TA + + C C + + ER K++L +
Sbjct: 17 LLENGKPRTASSPSFSHCSSCRCSARASSSVSGGDLRERLSKTRLRDIKLHDAINLFREM 76
Query: 42 ---RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
RPF + +N +L A++ +++Y ++ + ++M G D+ T+NIV+ ++
Sbjct: 77 VKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQV 136
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+L +M + G+ PD T L++ + ++ A++L++ M E+G+ P ++ + +
Sbjct: 137 SLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAI 196
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+D L + ++ FF E+ KG P+VV YT ++ +G A L MI +
Sbjct: 197 IDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI 256
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
PNV TY++++ F GK EA + +EM +P+ + Y++L++ L ++ EA++
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 277 VIRHMVEKGKYIHLVS 292
+ MV KG + +VS
Sbjct: 317 MFDLMVSKGCFPDVVS 332
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 134/271 (49%), Gaps = 7/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G A +++ IK K+ P +Y+A+L A ++ K++E ++++M
Sbjct: 235 LCNSGRWNDAARLLRDMIKRKI---TPNVITYSALLDAF--VKNGKVLEAKEIFEEMVRM 289
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
PDI+TY+ ++ ++D+ +++ D M G PD +YN L++ K +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDG 349
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L M + G + + + TL+ G + G++D + FF +M + G PD+ Y +++
Sbjct: 350 MKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGG 409
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G LEKA +F+ M ++ TY ++I+G C GK ++A + + +G P+
Sbjct: 410 LCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPD 469
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T++S L G E + M ++G
Sbjct: 470 IVTYTTMMSGLCTKGLQHEVEALYTKMKQEG 500
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 145/289 (50%), Gaps = 5/289 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G + + N+++ C G V A ++ S F P + ++N +++ L
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM--SNQDGFFPDQYTFNTLVNGLCK 307
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + M EGY PD+ TYN V+ +LG++ + +LD+M SP+ T
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K ++ A L + G P V F +L+ GL N F+EM
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC PD Y ++I S + G+L++A ++ M G +V TYN++I GFC A K
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + EME G + N + YNTL+ L + ++ +A +++ M+ +G+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 143/282 (50%), Gaps = 5/282 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P T T+N LI T + + E R + SK P ++N+++ L R +++
Sbjct: 363 PNTV-TYNTLISTLCKENQVEEATELARVLTSK--GILPDVCTFNSLIQGLCLTRNHRVA 419
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++++M +G PD TYN+++ + GKLD+ +L +M SG + TYN L+
Sbjct: 420 MELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDG 479
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K +K A + + M+ G + + + TL+DGL ++ ++ D+M +G PD
Sbjct: 480 FCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPD 539
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y ++T + G+++KA D+ M + G P++ TY ++I G C AG+ + A +++
Sbjct: 540 KYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
++ +G N YN ++ L K EA + R M+E+ +
Sbjct: 600 SIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
++GF TFN L+ C G V A ++++ ++ + P +YN+++ L +
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE---GYDPDVYTYNSVISGLCKLG 344
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ K V QM +P+ +TYN ++ + ++++ L + G PD T+N
Sbjct: 345 EVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 404
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L A+ L M+ G +P + L+D L G LD +M
Sbjct: 405 SLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELS 464
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC V+ Y +I + A + +A+++FD M G N TYN++I G C + + ++A
Sbjct: 465 GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDA 524
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M +M G P+ YN+L+++ G + +A ++++ M G
Sbjct: 525 AQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 34 IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
+ SK NF P Y IL L + ++ + + M T+ I++ + +
Sbjct: 72 LASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQF 131
Query: 94 GKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH--MKEVGFDPSV 150
D+ ++D M G PD H YN +L++L G+ L ++H M G P V
Sbjct: 132 ELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNS--LKLVEISHAKMSVWGIKPDV 189
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
F L+ L RA L ++M + G +PD +T ++ YI G+L+ A + +
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPNFLVYNTLVSNLRNAG 269
M+ G + + N ++ GFC G+ ++A ++EM ++ G P+ +NTLV+ L AG
Sbjct: 250 MVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAG 309
Query: 270 KLAEAHEVIRHMVEKG 285
+ A E++ M+++G
Sbjct: 310 HVKHAIEIMDVMLQEG 325
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 97/211 (45%), Gaps = 2/211 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ + + E ++ +M G + + +TYN ++ + +++ +L+D+M
Sbjct: 472 TYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD +TYN LL +G A +++ M G +P ++ + TL+ GL +AG +
Sbjct: 532 IMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRV 591
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNS 225
+ + KG Y +I + +A +LF M+ + + P+ +Y
Sbjct: 592 EVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRI 651
Query: 226 MIRGFCM-AGKFDEACTMMKEMESRGCNPNF 255
+ RG C G EA + E+ +G P F
Sbjct: 652 VFRGLCNGGGPIREAVDFLVELLEKGFVPEF 682
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 2/217 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+G + T+N LI + R+ E F + ++ +YN ++ L R+ +
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ QM EG PD TYN ++ R G + + ++ M +G PD TY L+
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CM 182
L K + A LL ++ G + + + ++ GL R F EM +
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Query: 183 PDVVCYTVMITSYI-AAGELEKAQDLFDGMITKGQLP 218
PD V Y ++ G + +A D ++ KG +P
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 2/275 (0%)
Query: 12 TFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
TFNI I C E L R V S+ RP +YN ++ L + E +
Sbjct: 332 TFNIFIQGLCKEGSLDRAVRLLGCVSRE-GLRPDVVTYNTVICGLCRKSRVVEAEECLHK 390
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M + G+ P+ TYN ++ + G + +R+L + GF PD TY L++ +
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGD 450
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P A+ + G PS++ + TL+ GL + G + +EMA KGC PD+ Y +
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I G L A L ITKG +P++FTYN+++ G+C K D A ++ M S+G
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YNTL++ L K E E+ + M EKG
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 121/243 (49%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N ++HAL E ++ ++ G P++ T+NI + + G LD+ RL
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRL 352
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L + R G PD TYN ++ L + + + A L+ M GF+P+ + +++DG +
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + + KG PD Y ++ + G+ ++A +F + KG P++
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I+G C G A +M EM +GC P+ YN +++ L G L++A+ +I +
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532
Query: 283 EKG 285
KG
Sbjct: 533 TKG 535
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 142/298 (47%), Gaps = 8/298 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALL 56
M+ GF T+N +I C G V A R +K +F F+P + +Y ++++
Sbjct: 391 MVNGGFEPNDFTYNSIIDGYCKKGMVVDA----NRILKDAVFKGFKPDEFTYCSLVNGFC 446
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
V++ +G P I+ YN ++ + G + +L++EM G PD
Sbjct: 447 QDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIW 506
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN++++ L K A +L+ G P + + TL+DG R LD+ + M
Sbjct: 507 TYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRM 566
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++G PDV+ Y ++ + E+ ++F M KG PN+ TYN++I C + K
Sbjct: 567 WSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKV 626
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+EA ++ EM+S+G P+ + + TL++ G L A+ + R M ++ H + +
Sbjct: 627 NEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATY 684
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 133/299 (44%), Gaps = 43/299 (14%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLD 97
RP YN ++ G+ Q LI Q +M+++G PDI TYN+++ ++G L
Sbjct: 466 LRPSIIVYNTLIK---GLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLS 522
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+ L+ + G PD TYN L+ + K +A+ L+N M G P V+ + TL+
Sbjct: 523 DANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLL 582
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+GL + + F M KGC P+++ Y +I S + ++ +A DL M +KG
Sbjct: 583 NGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMK--------------------------------- 244
P+V ++ ++I GFC G D A + +
Sbjct: 643 PDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALR 702
Query: 245 ---EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
EM+ GC+P+ Y L+ G + + ++ + +EKG +I ++ F R C
Sbjct: 703 LFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKG-FIPSLTTFGRVLNC 760
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 132/335 (39%), Gaps = 70/335 (20%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G ++ V+ F + LFN P SYNAI++ L+ + VY +M D+ D+
Sbjct: 166 GRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDV 225
Query: 81 LTYNI-----------------------------------VMCAKYRLGKLDQFHRLLDE 105
TY I V+ Y G D+ L DE
Sbjct: 226 YTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDE 285
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M PD T+N L+H L K L + L + + + G P++ F + GL + G+
Sbjct: 286 MLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGS 345
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD ++ +G PDVV Y +I + +A++ M+ G PN FTYNS
Sbjct: 346 LDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNS 405
Query: 226 MI-----------------------------------RGFCMAGKFDEACTMMKEMESRG 250
+I GFC G D+A + K+ +G
Sbjct: 406 IIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKG 465
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +VYNTL+ L G + A +++ M EKG
Sbjct: 466 LRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 131/291 (45%), Gaps = 13/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N++I C G + A ++ I P +YN ++
Sbjct: 496 MAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCI---PDIFTYNTLVDGY-- 550
Query: 58 IRQYKL---IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
RQ KL IE V +M +G PD++TYN ++ + K ++ + M G +P+
Sbjct: 551 CRQLKLDSAIELV-NRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 609
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN ++ L K A++LL MK G P V+ F TL+ G + G+LD F
Sbjct: 610 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR 669
Query: 175 EMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M + Y ++I+++ ++ A LF M G P+ +TY +I GFC
Sbjct: 670 GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKT 729
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G ++ + E +G P+ + +++ L K+ EA +I MV+K
Sbjct: 730 GNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQK 780
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N L+ + + +V+E F P +YN I+ +L ++
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYN 119
+ +M +G PD++++ ++ ++G LD + L M + S TYN
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYN 685
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I++ + AL L + MK+ G DP + L+DG + GN++ F E K
Sbjct: 686 IIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEK 745
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G +P + + ++ ++++A + M+ K +P+
Sbjct: 746 GFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDT 786
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 3/178 (1%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH--FTTLMDGLSRAGN 165
+ GF TY +L LG K NLL+ M+ D ++L + M R G
Sbjct: 112 KQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRS-NLDNTLLEGVYVEAMRFYGRKGK 170
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ F+ M C P V Y ++ + G +A ++ M K +V+TY
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTI 230
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
I+ FC G+ A +++ M GC N + Y T+V+ G A E+ M+E
Sbjct: 231 RIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLE 288
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 49/106 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ A K+ ++ +M G PD TY +++ + G ++Q ++ L E
Sbjct: 683 TYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLEN 742
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
GF P T+ +L+ L K A+ +++ M + P ++
Sbjct: 743 IEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTVN 788
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 132/254 (51%), Gaps = 9/254 (3%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN IL L + K + M+ APDI TYNI++ A ++G+L+ L++ M
Sbjct: 42 YNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQ 101
Query: 108 RSGFSPDFHTYNILLHVL---GKGD-KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D TYN L+H L G G + A L M + G P+ + +T ++D L R
Sbjct: 102 ARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRV 161
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
+ + D M GC D+V Y ++I + AG ++KA DLF M T+G +P+V TY
Sbjct: 162 KMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTY 221
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS++ GFC AGK +EA + EM++RG PN Y ++ AG++ +AH + M +
Sbjct: 222 NSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRK 281
Query: 284 KG-----KYIHLVS 292
+G Y+ L+S
Sbjct: 282 EGLVDAISYVALIS 295
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 17/273 (6%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN---SYNAILHALL--GIRQYKL 63
T+NILI C G + A+ +VE + R +YN ++H L G ++++
Sbjct: 76 TYNILINALCKVGRLEDAQGLVE------MMQARDCPTDIVTYNTLIHGLCRKGNGRFRV 129
Query: 64 IEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M D+G+ P +TY +V+ A R+ +Q ++LD M +G + D TYN+L
Sbjct: 130 ERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNML 189
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K A++L M G P V+ + +++DG +AG ++ F EM +G
Sbjct: 190 INRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGI 249
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ YT + + + AG ++ A M +G L + +Y ++I C GK
Sbjct: 250 FPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEG-LVDAISYVALISTICKLGKGKLGFQ 308
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+++EM +G PN + +N + L +A
Sbjct: 309 LLREMLEKGFKPNLVTFNVVFEALSKESNTDDA 341
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 104/243 (42%), Gaps = 39/243 (16%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
TY+ ++ G+ Q LL+ M + + YNI+L L K K AL+LL+ M
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG-- 199
P + + L++ L + G L+ + + M + C D+V Y +I G
Sbjct: 66 ATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNG 125
Query: 200 --ELEKAQDLFDGMITKGQLP-----------------------------------NVFT 222
+E+A LF+ M+ KG P ++ T
Sbjct: 126 RFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVT 185
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN +I F AG D+A + EM +RGC P+ + YN++V AGK+ EA+++ M
Sbjct: 186 YNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMK 245
Query: 283 EKG 285
+G
Sbjct: 246 ARG 248
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 15/242 (6%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNF---------RPFKNSYNAILHALLG 57
PT T+N LI GL RK RF + F P +Y ++ ALL
Sbjct: 106 PTDIVTYNTLI-----HGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLR 160
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + V M + G A D++TYN+++ + G +D+ L EM G PD T
Sbjct: 161 VKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVT 220
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ K K A L MK G P+ +T++ D +AG + + EM
Sbjct: 221 YNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMR 280
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + D + Y +I++ G+ + L M+ KG PN+ T+N + D
Sbjct: 281 KEG-LVDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTD 339
Query: 238 EA 239
+A
Sbjct: 340 DA 341
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 78/180 (43%), Gaps = 4/180 (2%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+ ++ + + AL LL HMK + + ++ L + G M
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG-- 234
A C PD+ Y ++I + G LE AQ L + M + ++ TYN++I G C G
Sbjct: 66 ATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNG 125
Query: 235 --KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + A + +EM +G P + Y ++ L +A +V+ M E G LV+
Sbjct: 126 RFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVT 185
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 1/167 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG T+N+LI + G+ K ++ F++ P +YN+++ +
Sbjct: 174 MHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGK 233
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G P+ TY + A + G++ H L EM + G D +Y
Sbjct: 234 VEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGLV-DAISYVA 292
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
L+ + K K LL M E GF P+++ F + + LS+ N D
Sbjct: 293 LISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKESNTD 339
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 39/63 (61%)
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N FTY++++RG+C G+ +A +++ M++ N +YN ++++L GK EA +++
Sbjct: 3 NAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLL 62
Query: 279 RHM 281
M
Sbjct: 63 HSM 65
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 139/284 (48%), Gaps = 7/284 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
N P T TFNIL+ C G V AR V E + P +YNA++ Q
Sbjct: 301 NVMPDTV-TFNILVDGLCKEGMVSEARCVSETMTEK---GAEPNAYTYNALMDGYCLHNQ 356
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V M +G AP++ +YNI++ + ++++ RLL EM +PD TY+
Sbjct: 357 MDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYST 416
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + +P ALNL M G P ++ ++ L+DG + G+LD EM +
Sbjct: 417 LMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERR 476
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+++ YT++I AG+LE A++LF + G P+++TYN MI+G G DEA
Sbjct: 477 IKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAY 536
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ME G P+ YN ++ + A ++I MV K
Sbjct: 537 EFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGK 580
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T+N ++ C+ G++ A ++ + + N P ++N ++ L
Sbjct: 262 MVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR---NVMPDTVTFNILVDGLCK 318
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
V + M+++G P+ TYN +M ++D+ ++L M G +P+ +
Sbjct: 319 EGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSS 378
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL++ K + A LL+ M E P + ++TLM GL + G F EM
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +PD++ Y++++ + G L++A L M + PN+ Y +IRG +AGK +
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE 498
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + ++ + G P+ YN ++ L G EA+E R M + G
Sbjct: 499 VAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG 546
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G ++N +I C G +A +V + +++ +P +YN I+ +L
Sbjct: 192 MVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNR---GKPNVVTYNTIIDSLCK 248
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R +M D G PD++TYN ++ LG+L++ RL EM PD T
Sbjct: 249 DRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVT 308
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ L K A + M E G +P+ + LMDG +D M
Sbjct: 309 FNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMI 368
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P++ Y ++I Y + + +A+ L M K P+ TY+++++G C G+
Sbjct: 369 GKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPR 428
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA + KEM S G P+ + Y+ L+ G L EA ++++ M E+
Sbjct: 429 EALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHER 475
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + N+LI C V A V+ + K +P ++N +++ L +
Sbjct: 126 GVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFK---LGIQPDAITFNTLINGLCNEGKI 182
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K ++ +M G+ P++++YN V+ + G R+ +M ++ P+ TYN +
Sbjct: 183 KEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTI 242
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A+ L+ M + G P V+ + T++ G G L+ F EM +
Sbjct: 243 IDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNV 302
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPD V + +++ G + +A+ + + M KG PN +TYN+++ G+C+ + DEA
Sbjct: 303 MPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIK 362
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ M +GC PN YN L++ + ++ EA ++ M EK
Sbjct: 363 VLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 121/247 (48%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
N RP + L ++ +QY + QM G ++ + N+++ RL +D
Sbjct: 90 MNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDF 149
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
++ +M + G PD T+N L++ L K A+ L N M G +P+V+ + T+++
Sbjct: 150 AVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVIN 209
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL + GN F +M P+VV Y +I S + +A + M+ +G P
Sbjct: 210 GLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPP 269
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TYN+++ GFC G+ +EA + KEM R P+ + +N LV L G ++EA V
Sbjct: 270 DVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVS 329
Query: 279 RHMVEKG 285
M EKG
Sbjct: 330 ETMTEKG 336
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 127/259 (49%), Gaps = 6/259 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S N +++ L + V +M G PD +T+N ++ GK+ + L +EM
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
SG P+ +YN +++ L K + A+ + M++ P+V+ + T++D L + +
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F EM ++G PDVV Y ++ + + G+L +A LF M+ + +P+ T+N +
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG- 285
+ G C G EA + + M +G PN YN L+ ++ EA +V+ M+ KG
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372
Query: 286 -----KYIHLVSKFKRYKR 299
Y L++ + + KR
Sbjct: 373 APNLSSYNILINGYCKSKR 391
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL M + PSV+ F + +++ + ++M G +V V+I
Sbjct: 80 ALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLIN 139
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
++ A + M G P+ T+N++I G C GK EA + EM G P
Sbjct: 140 CLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEP 199
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVE-KGK 286
N + YNT+++ L G A V R M + +GK
Sbjct: 200 NVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGK 233
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 75/192 (39%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E T++ L+ +VG R+ + F + P +Y+ +L
Sbjct: 402 MSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGH 461
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M + P+I+ Y I++ + GKL+ L ++ G PD TYN+
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNV 521
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K A M++ GF P + ++ G + + DEM K
Sbjct: 522 MIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKR 581
Query: 181 CMPDVVCYTVMI 192
D + +++
Sbjct: 582 FSADSSTFQMLL 593
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DA F+ M P VV + + S + A L + M G NV++ N +
Sbjct: 79 DALTSFY-RMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVL 137
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C D A ++M +M G P+ + +NTL++ L N GK+ EA + MV G
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGH 197
Query: 287 YIHLVS 292
+++S
Sbjct: 198 EPNVIS 203
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 74/161 (45%), Gaps = 6/161 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G ++IL+ C G + A K+++ + ++ +P Y ++ +
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI---KPNIILYTILIRGMFI 493
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + ++ ++S +G PDI TYN+++ + G D+ + +M GF PD +
Sbjct: 494 AGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCS 553
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
YN+++ + A+ L++ M F F L+D
Sbjct: 554 YNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLD 594
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + + + V+ ++ G P ++++N +M RLG LDQ +L + M
Sbjct: 139 FNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A +L N M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ + +M ++ +PD++ Y +I G+L++AQDL D M KG P+ TY ++I
Sbjct: 259 SAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A + + M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 379 PDNGTYTMIINEF 391
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ +A+ V + K + RP S+N +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITK---WGLRPSVVSFNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+++ + L +EM G P+ T
Sbjct: 184 LGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K K +A+ M F P ++ + TL+ GL + G+L + DEM
Sbjct: 244 FTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMR 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A +L + M+ + + Y ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRAT 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++EM S G P+ Y +++ + A ++++ M +G
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQG 411
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y+QM + + PD++TYN ++ + G L Q LLDEM G PD TY L+
Sbjct: 263 TYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +A L M + + +T L+ GL + G + EM + G PD
Sbjct: 323 KEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + +++ A L M +G +P V T
Sbjct: 383 TYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G+V A + ++ + F P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQMLSQ---CFLPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +M +G PD +TY ++ + G LD L + M + D
Sbjct: 289 KGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + A +L M VG P +T +++ + ++ EM
Sbjct: 349 YTALISGLCQEGRATDAEKMLREMLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQ 408
Query: 178 NKGCMPDVV 186
+G +P VV
Sbjct: 409 RQGHVPCVV 417
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 151/288 (52%), Gaps = 16/288 (5%)
Query: 3 ENGFPTTARTFNILI-CTCGE------VGLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
++ +PT RT+ +LI CG + L +++ E+ IK P ++Y ++ +L
Sbjct: 317 DDCYPT-VRTYTVLIKALCGSERKSEALNLVKEMEEKGIK-------PNIHTYTVLIDSL 368
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + QM ++G P+++TYN ++ + G ++ +++ M P+
Sbjct: 369 CSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + A+ +LN M E P V+ + +L+DG R+GN D+
Sbjct: 429 RTYNELIKGYCKRNVH-KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M ++G +PD YT MI S + +E+A DLFD + K +PNV Y ++I G+C AGK
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+EA M+++M S+ C PN L +N L+ L GKL EA + MV+
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVK 595
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 138/288 (47%), Gaps = 7/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+N LI C G + A VVE ++S+ N RP +YN ++
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDALDVVE-LMESR--NLRPNTRTYNELIKGYCK 440
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+K + V +M + PD++TYN ++ + R G D +RLL M G PD T
Sbjct: 441 RNVHKAM-GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWT 499
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K + A +L + +++ P+V+ +T L+DG +AG ++ ++M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C+P+ + + +I G+L++A L + M+ P V T +I G FD
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++M S G P+ Y T + G+L +A +++ M E G
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%), Gaps = 40/274 (14%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN +L++L ++ VY +M ++ P+I TYN ++ ++G +++ ++ + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 108 RSGFSPDFHTYNILL-----------------------------------HVLGKGDKPL 132
+G PDF TY L+ H L +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A++L MK+ P+V +T L+ L + EM KG P++ YTV+I
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
S + +LEKA++L M+ KG +PNV TYN++I G+C G ++A +++ MESR
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425
Query: 253 PNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEK 284
PN YN L+ RN K A V+ M+E+
Sbjct: 426 PNTRTYNELIKGYCKRNVHK---AMGVLNKMLER 456
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ + R G +D+ ++ EM P+ +TYN +++ K A ++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G DP +T+L+ G + +LD+ F EM KGC + V YT +I ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A DLF M P V TY +I+ C + + EA ++KEME +G PN Y L+
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+L + KL +A E++ M+EKG
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKG 388
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 12/271 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFR---PFKNSYNAILHA 54
M+E T+N LI C G A +++ L N R P +Y +++ +
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS------LMNDRGLVPDPWTYTSMIDS 506
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L ++ + ++ + + P+++ Y ++ + GK+++ H +L++M P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPN 566
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+N L+H L K A L M ++ P+V T L+ L + G+ D F
Sbjct: 567 SLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQ 626
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G PD YT I +Y G L+ A+D+ M G P++FTY+S+I+G+ G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLG 686
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ + A ++K M GC P+ + +L+ +L
Sbjct: 687 RTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ TL++ L+R G +D K + EM P++ Y M+ Y G +E+A ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+ FTY S+I G+C D A + KEM +GC N + Y L+ L ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305
Query: 273 EAHEVIRHMVEKGKY 287
EA ++ M + Y
Sbjct: 306 EAMDLFVKMKDDDCY 320
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
CY ++ S G +++ + ++ M+ PN++TYN M+ G+C G +EA + +
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMI 244
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
G +P+F Y +L+ L A +V + M KG Y HL+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLI 295
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 121/352 (34%), Gaps = 96/352 (27%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+N P + TFN LI CT G++ A + E+ +K + +P ++ ++H LL
Sbjct: 561 KNCLPNSL-TFNALIHGLCTDGKLKEATLLEEKMVK---IDLQPTVSTDTILIHRLLKDG 616
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF---- 115
+ +QQM G PD TY + R G+L ++ +M +G SPD
Sbjct: 617 DFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYS 676
Query: 116 -------------------------------HTY-NILLHVLG------KGDKPLA---- 133
HT+ +++ H+L KG +P
Sbjct: 677 SLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMS 736
Query: 134 -------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK------- 179
+ LL M E G P+ + LM G+ GNL + FD M K
Sbjct: 737 NMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSE 796
Query: 180 -----------------------------GCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
G +P + ++I GE E+ +F
Sbjct: 797 LVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQN 856
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
++ G + + +I G G + + ME GC + Y+ L+
Sbjct: 857 LLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLI 908
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 100/248 (40%), Gaps = 19/248 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR- 59
M ENG T++ LI G++G + P ++++ +++ LL ++
Sbjct: 663 MKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 60 -----------------QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
++ ++ + ++M + G P+ +Y +M +G L ++
Sbjct: 723 GKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKV 782
Query: 103 LDEMG-RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
D M + G SP +N LL K +K A +++ M VG P + L+ L
Sbjct: 783 FDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLY 842
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G + F + G D + + ++I G +E +LF+ M G +
Sbjct: 843 KKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQ 902
Query: 222 TYNSMIRG 229
TY+ +I G
Sbjct: 903 TYSLLIEG 910
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 143/292 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G+ +++I+I VG +V++ K+ P YN I+ L R
Sbjct: 187 MVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL 246
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M G P ++TY ++ LG+ + LL+EM PD +++
Sbjct: 247 VNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSV 306
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ ++ K + A +L M E+G +P V + TLM+G + + F+ M +KG
Sbjct: 307 LIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKG 366
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MPDV +++++ Y A +++A+ LFD M +G +P+ +YN++I G C A + EA
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ K+M S G PN + Y+ L+ L G L +A + R M G LV+
Sbjct: 427 ELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVT 478
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 150/297 (50%), Gaps = 10/297 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G TF+ LI C G++G A +E F ++P +SY+ I+ L
Sbjct: 152 IIKLGLEPNVITFSTLINGFCIEGKIGRA---IELFDVMVARGYKPNVHSYSIIIKGLCR 208
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--CAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + + + M G PD++ YN ++ K RL +++ + +M +G P
Sbjct: 209 VGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRL--VNEAVHIFCKMKGTGILPTV 266
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+H L + A LLN MK P ++ F+ L+D + + G + +
Sbjct: 267 VTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKT 326
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G PDV Y ++ Y E+ +A+ +F+ MI+KG++P+VF+++ ++ G+C A +
Sbjct: 327 MTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKR 386
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEA + EM RG P+ + YNTL+S L A + EA E+ + M G +LV+
Sbjct: 387 IDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVT 443
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 6/245 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
F++LI C GEV AR +++ + P +YN +++ + V+
Sbjct: 303 AFSVLIDIMCKEGEVSEARVILKTMTE---MGVEPDVATYNTLMNGYCLRMEVVEARKVF 359
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M +G PD+ +++I++ + ++D+ +L DEM G PD +YN L+ L +
Sbjct: 360 EVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQA 419
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+PL A L M G+ P+++ ++ L+D LS+ G LD F M N G PD+V Y
Sbjct: 420 RRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTY 479
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+MI G+ + A++LF + KG PN + I G C G DEA ++ME
Sbjct: 480 NIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Query: 249 RGCNP 253
C+P
Sbjct: 540 DDCSP 544
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 126/261 (48%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L + V F K K P +Y +++H L + ++K + +M PD++ ++
Sbjct: 246 LVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFS 305
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
+++ + G++ + +L M G PD TYN L++ + + A + M
Sbjct: 306 VLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISK 365
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P V F+ L++G +A +D K FDEM ++G +PD V Y +I+ A +A
Sbjct: 366 GRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEA 425
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++LF M + G PN+ TY+ ++ G D+A + + ME+ G P+ + YN ++
Sbjct: 426 EELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDG 485
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
+ GK +A E+ + KG
Sbjct: 486 MCKYGKFKDARELFAELSVKG 506
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 119/246 (48%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P + + AL+ ++ YK + + +QM G + D+L+ I++ RL +D
Sbjct: 86 NPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYG 145
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L ++ + G P+ T++ L++ K A+ L + M G+ P+V ++ ++ G
Sbjct: 146 FSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKG 205
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G + M GC PDVV Y ++ + +A +F M G LP
Sbjct: 206 LCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPT 265
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY S+I G G++ EA ++ EM+ P+ + ++ L+ + G+++EA +++
Sbjct: 266 VVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILK 325
Query: 280 HMVEKG 285
M E G
Sbjct: 326 TMTEMG 331
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 98/214 (45%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M + P I+ + + A R+ L +M +G S D + IL++ +
Sbjct: 79 FNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCR 138
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
++L + ++G +P+V+ F+TL++G G + FD M +G P+V
Sbjct: 139 LCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHS 198
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+++I G+ + L + M G P+V YN+++ C +EA + +M+
Sbjct: 199 YSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMK 258
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G P + Y +L+ LRN G+ EA ++ M
Sbjct: 259 GTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G +F+IL+ C + A+++ + L P SYN ++ L
Sbjct: 362 MISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLI---PDTVSYNTLISGLCQ 418
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ E +++ M GY P+++TY+I++ + G LDQ L M SG PD T
Sbjct: 419 ARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVT 478
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI++ + K K A L + G P+ T +DG+ + G LD F +M
Sbjct: 479 YNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQME 538
Query: 178 NKGCMPDVVC 187
C P C
Sbjct: 539 KDDCSPAQGC 548
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 68/148 (45%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+ NHM PS++ F L L R + +M G DV+ T++I
Sbjct: 75 ALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILIN 134
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ ++ + +I G PNV T++++I GFC+ GK A + M +RG P
Sbjct: 135 CFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKP 194
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N Y+ ++ L GK E +++ HM
Sbjct: 195 NVHSYSIIIKGLCRVGKTTEVIKLLEHM 222
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 53/121 (43%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N++ F+ M N +P +V + + ++ + + L M G +V +
Sbjct: 71 NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I FC D +++ ++ G PN + ++TL++ GK+ A E+ MV +
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190
Query: 285 G 285
G
Sbjct: 191 G 191
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G TFN+L+ + V + F + + N P +Y+ ++ A+
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ M G P+I TY ++ + G +D+ L +EM G YN
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H LG+ + AA L M G P + FT+L+ GL AG + F E + G
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C DV Y V+I + + L++A ++F + G +P+V+T+N+++ G C +G+ +A
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M+ GC P+ VYNTL+ LR +G++ EA +++ M G
Sbjct: 355 ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 5/273 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T +N LI G G A + F + +P ++ ++++ L +
Sbjct: 220 MTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGR 279
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++Q+ D G A D+ YN+++ + +LD+ + E+ G PD +T+N
Sbjct: 280 ASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNA 339
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A LL MK G P V + TL+DGL ++G ++ EM + G
Sbjct: 340 LMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y +I G +E A LF+ + KG N TYN+++ G CMAG+ DEA
Sbjct: 400 YEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG-FANTVTYNTILNGLCMAGRVDEAY 458
Query: 241 TMMKEMESRGC----NPNFLVYNTLVSNLRNAG 269
+ M+ +P+F+ Y TL++ R AG
Sbjct: 459 KLFNGMKQETVDGVIDPDFVTYTTLLNGARQAG 491
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 134/263 (50%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
GL K VE + + ++YN+++ A + + VY+ M G PD T
Sbjct: 67 AGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYT 126
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+N++M A + ++D +L +EM SP+ TY+IL+ + K AL + MK
Sbjct: 127 FNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK 186
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P++ +T+++DGL ++G++D + F+EM ++G + V Y +I +G +
Sbjct: 187 SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRAD 246
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A LF M++KG P+ T+ S++ G +AG+ EA + +E GC + +YN L+
Sbjct: 247 AAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLI 306
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L + +L EA E+ + E G
Sbjct: 307 DTLCKSKRLDEAWEIFGELEEDG 329
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T++ILI C CG V A KV F+ K RP +Y +++ L +++
Sbjct: 161 TYSILIDAVCKCGGVEKALKV---FLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLF 217
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M+ EG + YN ++ R G+ D +L EM G PD T+ L++ LG
Sbjct: 218 EEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVA 277
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + ++VG V + L+D L ++ LD F E+ G +PDV +
Sbjct: 278 GRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTF 337
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ +G + A L M G P+V YN++I G +G+ +EA ++ EM+S
Sbjct: 338 NALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQS 397
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + YNTL+ G++ +A + + KG
Sbjct: 398 LGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG 434
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 121/237 (51%), Gaps = 1/237 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN+++H L + ++++M +G PD +T+ ++ G+ + R+ E
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEAR 291
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G + D + YN+L+ L K + A + ++E G P V F LMDGL ++G +
Sbjct: 292 DVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH 351
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+M GC PDV Y +I +G +E+A L M + G P+V TYN++I
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLI 411
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
C G+ ++A + +E+ ++G N + YNT+++ L AG++ EA+++ M ++
Sbjct: 412 DESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQE 467
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 38/245 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G TF L+ G G A + F +++ N YN ++ L ++
Sbjct: 255 MLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKR 314
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ ++ ++G PD+ T+N +M + G++ LL +M R+G +PD YN
Sbjct: 315 LDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNT 374
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A LL M+ +G++P V+ + TL+D + G ++ F+E++ KG
Sbjct: 375 LIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG 434
Query: 181 --------------CM------------------------PDVVCYTVMITSYIAAGELE 202
CM PD V YT ++ AG E
Sbjct: 435 FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSE 494
Query: 203 KAQDL 207
A L
Sbjct: 495 LANSL 499
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F L G + AG L+ M C Y +I +++ AG +KA ++ M
Sbjct: 57 FIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMG 116
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+ +T+N ++ F A + D + +EM+++ C+PN + Y+ L+ + G +
Sbjct: 117 QSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVE 176
Query: 273 EAHEVIRHMVEKG 285
+A +V M +G
Sbjct: 177 KALKVFLDMKSRG 189
>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 136/274 (49%), Gaps = 3/274 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F +LI EVGL + + ++K F P + NA+L+ LL + ++ +Y M
Sbjct: 121 VFGVLIIAFSEVGLVDEALRVYLKVGAF---PAVQACNALLNGLLKKSSFDIMWELYNNM 177
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
P ++TYN+++ A R G + + L+ EM + G P Y L+H L K
Sbjct: 178 VSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKL 237
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ A ++ MK+ G P++ + LMDG + N+ + + M + G P+VV + ++
Sbjct: 238 MEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGIL 297
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + EL A+ F M G +PNV +NS+I G+ AG EA ++ EME
Sbjct: 298 IDALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKI 357
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ Y+ L+ N G + EA ++++ M ++G
Sbjct: 358 SPDVFTYSILIKNACRLGTVEEADDILKRMEKEG 391
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 136/289 (47%), Gaps = 13/289 (4%)
Query: 6 FPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FPT T+N+L+ C G+V A+ ++ +K + P Y ++H L +
Sbjct: 183 FPTVV-TYNVLVDACCRQGDVLRAKSLISEMVKKGI---EPTVVIYTTLIHGLCSESKLM 238
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +++QM D G P++ TYN++M + + Q L M G P+ T+ IL+
Sbjct: 239 EAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILI 298
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K + LAA M + G P+V+ F +L+DG S+AGN EM
Sbjct: 299 DALCKVRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKIS 358
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDV Y+++I + G +E+A D+ M +G N YNS+I G+C G ++A +
Sbjct: 359 PDVFTYSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEI 418
Query: 243 MK------EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K +M G P+ L Y ++ NA +A+ + M++ G
Sbjct: 419 FKATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMG 467
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 111/246 (45%), Gaps = 18/246 (7%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y+A++H L G + Y + + D++ + C R+ L L ++
Sbjct: 65 YSAVIHYLTGAKVYPTARCLTK---------DLIQTLLQSCTPRRVNSL--VFNALSQLR 113
Query: 108 RSGFSPD-FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
S F+P F I +G D+ L ++K VG P+V L++GL + +
Sbjct: 114 GSKFNPSVFGVLIIAFSEVGLVDEALRV-----YLK-VGAFPAVQACNALLNGLLKKSSF 167
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D ++ M ++ P VV Y V++ + G++ +A+ L M+ KG P V Y ++
Sbjct: 168 DIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTL 227
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I G C K EA +M ++M+ G PN YN L+ + +A + + M++ G
Sbjct: 228 IHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGL 287
Query: 287 YIHLVS 292
++V+
Sbjct: 288 QPNVVT 293
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 12/248 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G T+N+L+ C V A + + + L +P ++ ++ AL
Sbjct: 247 MKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGL---QPNVVTFGILIDALCK 303
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+R+ + QM+ G P+++ +N ++ + G + LL EM + SPD T
Sbjct: 304 VRELLAARRFFVQMAKFGVVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFT 363
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC------KY 171
Y+IL+ + A ++L M++ G + + + +L+DG + GN++
Sbjct: 364 YSILIKNACRLGTVEEADDILKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATK 423
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
FF +M G PD + Y VM+ ++ A + L MI G +PN T + RG+
Sbjct: 424 FFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQ 483
Query: 232 MAGKFDEA 239
G A
Sbjct: 484 DNGYLKSA 491
>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
Length = 799
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 139/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+NGF T+N LI +G ++VV+ + +P +Y ++L+ L +
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M +G P + TY I++ G L + H LD M +G SPD H +NI
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNI 379
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
K A+++ N M++ G P+V+++ L+D L + G +D + F++M N+G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++V + ++ + E+A++L M+ +G PN +N++I C G+ E
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ ME G P+ Y L+S G+ EA +V MV G
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG 544
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 130/279 (46%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P +++I+I G K F++ P +Y ++ L + + E
Sbjct: 196 PPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEG 255
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+QQM D G+ P+ TYN ++ +GK + ++L+EM G PD +TY LL+ L
Sbjct: 256 VFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLC 315
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A + M G P V + L+ G + G L F D M G PD
Sbjct: 316 KNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHH 375
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ + ++Y G ++KA D+F+ M G PNV Y ++I C G+ D+A +M
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G PN +V+N+LV L K A E++ M+++G
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+ ILI T G + ++ +++ L P + +N A
Sbjct: 330 MIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGL---SPDHHIFNIFFSAYAK 386
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +M G +P+++ Y ++ A +LG++D ++M G +P+
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L DK A L+ M + G P+ + F TL+ L G + + D M
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 506
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD YT +I+ Y G ++A+ +FDGM++ G P TYN+++ G+C A + D
Sbjct: 507 HVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRID 566
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + +EM +G P + YNT++ L + +EA E+ +M+ G
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 614
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 137/292 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ENG FNI + G+ K ++ F K + P +Y A++ AL + +
Sbjct: 365 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 424
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E + QM +EG P+I+ +N ++ + K ++ L+ EM G P+ +N
Sbjct: 425 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 484
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + L++ M+ VG P +T L+ G G D + FD M + G
Sbjct: 485 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIG 544
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P V Y ++ Y +A ++ A LF M+ KG P V TYN+++ G +F EA
Sbjct: 545 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAK 604
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M + G + YN +++ L + + EA ++ + + KG +++++
Sbjct: 605 ELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 656
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G A FN LIC VG + + RP SY ++ +
Sbjct: 470 MLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGR 529
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E V+ M G +P +TYN ++ ++D + L EM R G +P TYN
Sbjct: 530 TDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNT 589
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+LH L + + A L +M G + + +++GL ++ +D F + +KG
Sbjct: 590 ILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 649
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+++ +T+MI + + G E A DLF + G +PNV TY + G +E
Sbjct: 650 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 709
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ ME G PN + N LV L + G ++ A + + E+
Sbjct: 710 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 753
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 122/247 (49%), Gaps = 12/247 (4%)
Query: 47 SYNAILHALL-GIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK-LDQFHR 101
+ N +L L G R + ++ + Q+M + G PD ++Y I+ +C + R + L+ H
Sbjct: 127 AINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHM 186
Query: 102 LLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ D+ GR P+ +Y+I+++ G+ DKP NL M + G P V+ +TT++D
Sbjct: 187 MADDHGRR-CPPNVVSYSIVINGFFTEGQVDKP---YNLFLEMIDRGIPPDVVTYTTVID 242
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL +A D + F +M + G P+ Y +I Y++ G+ ++ + + M +G P
Sbjct: 243 GLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKP 302
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ +TY S++ C G+ EA M +G P Y L+ G L+E H +
Sbjct: 303 DCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFL 362
Query: 279 RHMVEKG 285
MVE G
Sbjct: 363 DLMVENG 369
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 107/213 (50%), Gaps = 4/213 (1%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP++ TY+I++ R+G L+ + ++G+ D N LL L G + A++
Sbjct: 87 APNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMD 146
Query: 137 -LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN---KGCMPDVVCYTVMI 192
LL M E+G P + +T L+ GL + MA+ + C P+VV Y+++I
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVI 206
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G+++K +LF MI +G P+V TY ++I G C A FD A + ++M G
Sbjct: 207 NGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YN L+ + GK E +++ M +G
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG 299
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G FN L+ CT + A ++V + + P +N ++ L
Sbjct: 435 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC---PNAVFFNTLICNLCN 491
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M G PD +Y ++ G+ D+ ++ D M G SP T
Sbjct: 492 VGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVT 551
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LLH + A L M G P V+ + T++ GL + K + M
Sbjct: 552 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 611
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G D+ Y +++ + +++A +F + +KG N+ T+ MI G+ +
Sbjct: 612 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 671
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + + + G PN + Y + NL G L E + M + G
Sbjct: 672 DAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 719
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 144/284 (50%), Gaps = 6/284 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C G++G A + ++ I F+P +Y +++ L + +
Sbjct: 184 TFNTLIRGLCVEGKIGEALHLFDKTIGE---GFQPDVVTYGTLMNGLCKVGNTSAAIRLL 240
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M + P+++ YN ++ + + ++ + L EM G SPD TYN L+H L
Sbjct: 241 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 300
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ LLN M P+V+ F+T++D L + G + D M +G PDVV Y
Sbjct: 301 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 360
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T ++ + E+++A +FD M+ KG +PNV +YN +I G+C + D+A ++++M
Sbjct: 361 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 420
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G + + YNTL+ L + G+L A + MV G+ LV+
Sbjct: 421 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 464
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 127/243 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L ++ ++ Y + + QM G PD+ T NI++ + L +L +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+N L+ L K AL+L + GF P V+ + TLM+GL +
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M K C P+V+ Y +I S ++ +A +LF MITKG P++FT
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I C ++ T++ EM + PN +V++T+V L G +A AH+V+ M+
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349
Query: 283 EKG 285
++G
Sbjct: 350 KRG 352
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 6/281 (2%)
Query: 2 IENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I GF T+ L +C G A +++ ++ N RP +YN I+ +L
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK---NCRPNVIAYNTIIDSLCKD 265
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
RQ ++ +M +G +PDI TYN ++ A L + LL+EM S P+ +
Sbjct: 266 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ ++ L K A ++++ M + G +P V+ +T LMDG +D FD M +
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KGC+P+V Y ++I Y ++KA L + M +G + + TYN++I G C G+
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
A + EM + G P+ + Y L+ L LAEA +++
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 486
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 35/314 (11%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + F L+ + ++ V+ + F P + N ++++ +R+
Sbjct: 109 PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS 168
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++ G PD T+N ++ GK+ + L D+ GF PD TY L++ L
Sbjct: 169 VLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLC 228
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------ 180
K AA+ LL M + P+V+ + T++D L + + F EM KG
Sbjct: 229 KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 288
Query: 181 -----------------------------CMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
MP+VV ++ ++ + G + A D+ D M
Sbjct: 289 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 348
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
I +G P+V TY +++ G C+ + DEA + M +GC PN YN L++ ++
Sbjct: 349 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408
Query: 272 AEAHEVIRHMVEKG 285
+A ++ M +G
Sbjct: 409 DKAMGLLEQMSLQG 422
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 84/183 (45%), Gaps = 6/183 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ L+ C E+ A KV + + P SYN +++
Sbjct: 348 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV---PNVRSYNILINGYCQ 404
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ + +QMS +G D +TYN ++ +G+L L EM SG PD T
Sbjct: 405 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 464
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ LL ++ D +L + +DG+ RAG L+A + F ++
Sbjct: 465 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 524
Query: 178 NKG 180
+G
Sbjct: 525 CQG 527
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D L++ N + HM PS + FT L+ +++ + +M + G PDV
Sbjct: 94 DDALSSFNRMLHMHP---PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 150
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I S+ L A + ++ G P+ T+N++IRG C+ GK EA + +
Sbjct: 151 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 210
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + Y TL++ L G + A ++R MV+K
Sbjct: 211 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK 246
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
HF TL D LS F+ M + P V +T ++TS L M
Sbjct: 89 HFNTLDDALSS----------FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM 138
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G P+V+T N +I FC + A +++ ++ GC P+ +NTL+ L GK+
Sbjct: 139 DSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKI 198
Query: 272 AEAHEVIRHMVEKG 285
EA + + +G
Sbjct: 199 GEALHLFDKTIGEG 212
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 144/284 (50%), Gaps = 6/284 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C G++G A + ++ I F+P +Y +++ L + +
Sbjct: 222 TFNTLIRGLCVEGKIGEALHLFDKTIGE---GFQPDVVTYGTLMNGLCKVGNTSAAIRLL 278
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M + P+++ YN ++ + + ++ + L EM G SPD TYN L+H L
Sbjct: 279 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 338
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ LLN M P+V+ F+T++D L + G + D M +G PDVV Y
Sbjct: 339 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 398
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T ++ + E+++A +FD M+ KG +PNV +YN +I G+C + D+A ++++M
Sbjct: 399 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 458
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G + + YNTL+ L + G+L A + MV G+ LV+
Sbjct: 459 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 127/243 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L ++ ++ Y + + QM G PD+ T NI++ + L +L +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+N L+ L K AL+L + GF P V+ + TLM+GL +
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M K C P+V+ Y +I S ++ +A +LF MITKG P++FT
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I C ++ T++ EM + PN +V++T+V L G +A AH+V+ M+
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387
Query: 283 EKG 285
++G
Sbjct: 388 KRG 390
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 136/281 (48%), Gaps = 6/281 (2%)
Query: 2 IENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I GF T+ L +C G A +++ ++ N RP +YN I+ +L
Sbjct: 247 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK---NCRPNVIAYNTIIDSLCKD 303
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
RQ ++ +M +G +PDI TYN ++ A L + LL+EM S P+ +
Sbjct: 304 RQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 363
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ ++ L K A ++++ M + G +P V+ +T LMDG +D FD M +
Sbjct: 364 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 423
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KGC+P+V Y ++I Y ++KA L + M +G + + TYN++I G C G+
Sbjct: 424 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 483
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
A + EM + G P+ + Y L+ L LAEA +++
Sbjct: 484 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 524
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + +A VV+ IK + P +Y A++ + V+ M +G
Sbjct: 370 LCKEGMIAIAHDVVDMMIKRGV---EPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 426
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P++ +YNI++ ++ ++D+ LL++M G D TYN L+H L + A+
Sbjct: 427 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 486
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P ++ + L+D L + +L + D++ Y + I
Sbjct: 487 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMC 546
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG P+V TYN MI G C G DEA + ++M+ GC+ +
Sbjct: 547 RAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGC 606
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+YNT++ + + A ++++ M+ +G
Sbjct: 607 IYNTIIRGFLRSNETFGATQLLQEMLAEG 635
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 140/295 (47%), Gaps = 9/295 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ L+ C E+ A KV + + P SYN +++
Sbjct: 386 MIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV---PNVRSYNILINGYCQ 442
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ + +QMS +G D +TYN ++ +G+L L EM SG PD T
Sbjct: 443 IQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 502
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ LL ++ D +L + +DG+ RAG L+A + F ++
Sbjct: 503 YRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLS 562
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PDV Y +MI G L++A LF M G + YN++IRGF + +
Sbjct: 563 SKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETF 622
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE--VIRHMVEKGKYIHL 290
A +++EM + G + + +V L + G L ++ E +R + E+ + +HL
Sbjct: 623 GATQLLQEMLAEGFSADVSTTTLIVEMLSDDG-LDQSFERLRLRGVGEEDRELHL 676
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 35/314 (11%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + F L+ + ++ V+ + F P + N ++++ +R+
Sbjct: 147 PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS 206
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++ G PD T+N ++ GK+ + L D+ GF PD TY L++ L
Sbjct: 207 VLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLC 266
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------ 180
K AA+ LL M + P+V+ + T++D L + + F EM KG
Sbjct: 267 KVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIF 326
Query: 181 -----------------------------CMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
MP+VV ++ ++ + G + A D+ D M
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 386
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
I +G P+V TY +++ G C+ + DEA + M +GC PN YN L++ ++
Sbjct: 387 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 446
Query: 272 AEAHEVIRHMVEKG 285
+A ++ M +G
Sbjct: 447 DKAMGLLEQMSLQG 460
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D L++ N + HM PS + FT L+ +++ + +M + G PDV
Sbjct: 132 DDALSSFNRMLHMHP---PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTL 188
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I S+ L A + ++ G P+ T+N++IRG C+ GK EA + +
Sbjct: 189 NILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIG 248
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + Y TL++ L G + A ++R MV+K
Sbjct: 249 EGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK 284
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 59/134 (44%), Gaps = 10/134 (7%)
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
HF TL D LS F+ M + P V +T ++TS L M
Sbjct: 127 HFNTLDDALSS----------FNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM 176
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G P+V+T N +I FC + A +++ ++ GC P+ +NTL+ L GK+
Sbjct: 177 DSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKI 236
Query: 272 AEAHEVIRHMVEKG 285
EA + + +G
Sbjct: 237 GEALHLFDKTIGEG 250
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 19/287 (6%)
Query: 27 RKVVERFIKSKLFN-------------FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E F+K K F + +N ++H + +L + V+ +++
Sbjct: 105 RKVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITK 164
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P ++++N +M RLG LD+ RL M SG PD +TY++L++ L K K
Sbjct: 165 WGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMND 224
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L M G P+ + FTTL+DG + G++D + EM +G PD++ Y +I
Sbjct: 225 ANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIY 284
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L++AQDL D M KG P+ TY ++I G C G + A K M
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRL 344
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLVSKF 294
+ + Y L+S L G+ +A +++R M+ + G Y ++++F
Sbjct: 345 DDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEF 391
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITK---WGLRPSVVSFNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K++ + L EM +G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K A+ M GF P ++ + TL+ GL + G+L + DEM+
Sbjct: 244 FTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A MI + + Y ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++EM S G P+ Y +++ G + ++++ M G
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDG 411
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 71/156 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y++M +G++PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 TYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AL M + + +T L+ GL R G + EM + G PD
Sbjct: 323 KEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G+++ L M G +P V T
Sbjct: 383 TYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI NG TF LI C G + LA + + ++ F P +YN +++ L
Sbjct: 232 MIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQ---GFSPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P +T +++ + G++ EM
Sbjct: 349 YTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGHVPCVV 417
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 146/292 (50%), Gaps = 8/292 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQ 60
G P T NIL+ C C ++ LA + + IK P ++ ++L+ G R
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIK---LGHEPSIVTFGSLLNGFCRGDRV 167
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y + +++ QM GY P+++ YN ++ + ++D LL+ M + G PD TYN
Sbjct: 168 YDAL-YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNS 226
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A +++ M + P V F L+D + G + + F++EM +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y+++I L++A+++F M++KG P+V TY+ +I G+C + K +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM RG N + Y L+ AGKL A E+ R MV G + ++++
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 141/280 (50%), Gaps = 6/280 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G+ +N +I C +V A ++ R K + P +YN+++ L
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI---GPDVVTYNSLISGLCS 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + M+ PD+ T+N ++ A + G++ + +EM R PD T
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L++ L + A + M G P V+ ++ L++G ++ ++ F EM+
Sbjct: 294 YSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + + V YT++I Y AG+L A+++F M+ G PN+ TYN ++ G C GK +
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+A ++ +M+ G + + + YN ++ + AG++A+A ++
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 127/250 (50%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++ +L A+ +++Y ++ ++++QM G ++ T NI++ R +L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M + G P T+ LL+ +GD+ AL + + M +G+ P+V+ + T++DGL +
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ +D + M G PDVV Y +I+ ++G A + M + P+VFT
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N++I G+ EA +EM R +P+ + Y+ L+ L +L EA E+ MV
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 283 EKGKYIHLVS 292
KG + +V+
Sbjct: 319 SKGCFPDVVT 328
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G T+N LI C+ G A ++V K +++ P ++NA++ A +
Sbjct: 212 MEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY---PDVFTFNALIDACVK 268
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E Y++M PDI+TY++++ +LD+ + M G PD T
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL++ K K + L M + G + + +T L+ G RAG L+ + F M
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+++ Y V++ G++EKA + M G ++ TYN +IRG C AG+
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + + +G P+ Y T++ L G EA + R M E G
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG 496
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 6/246 (2%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C G V A + E I+ L P +Y+ +++ L + E ++
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSL---DPDIVTYSLLIYGLCMYSRLDEAEEMF 314
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M +G PD++TY+I++ + K++ +L EM + G + TY IL+ +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRA 374
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A + M G P+++ + L+ GL G ++ +M G D+V Y
Sbjct: 375 GKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I AGE+ A D++ + +G +P+++TY +M+ G G EA + ++M+
Sbjct: 435 NIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKE 494
Query: 249 RGCNPN 254
G PN
Sbjct: 495 DGILPN 500
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
R KLD L M + P ++ LL + K K + L M+ +G ++
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
L++ R L F +M G P +V + ++ + + A +FD M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G PNV YN++I G C + + D A ++ ME G P+ + YN+L+S L ++G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 272 AEAHEVIRHMVEKGKY 287
++A ++ M ++ Y
Sbjct: 238 SDATRMVSCMTKREIY 253
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 122/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ A ++ +M D G PD++TY V+ A R+GK+D ++M
Sbjct: 409 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 468
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +PD + YN L+ L A L++ + G ++ F+++++ L + G +
Sbjct: 469 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 528
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FD N G PD V Y++++ Y G++EKA +FD M++ G PNV Y ++
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTL 588
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C G+ DE ++ +EM RG P+ ++Y+ ++ L AG+ A M E G
Sbjct: 589 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESG 647
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G PD++TYN V+ A + +D+ L +M P+ TYN L++
Sbjct: 254 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 313
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ + M+ P V+ + LM L + G + + FD MA KG PDV
Sbjct: 314 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 373
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +M+ Y G L DLFD M+ G P+ +T+N +I+ + G D+A + EM
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y T+++ L GK+ +A E M+++G
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 472
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L +++V+R I L +YN+++HAL R E +QM ++ P+ TYN
Sbjct: 254 LFKEMVQRGIPPDLV-------TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 306
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ G+ + R+ EM R PD T ++L+ L K K A ++ + M
Sbjct: 307 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 366
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G +P V + +++G + G L FD M G PD + V+I +Y G L+KA
Sbjct: 367 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 426
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+F+ M G P+V TY ++I C GK D+A +M +G P+ YN L+
Sbjct: 427 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 486
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G L +A E+I ++ G ++ +V
Sbjct: 487 FCTHGSLLKAKELISEIMNNGMHLDIV 513
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI G ++ V F + + + P + + ++ +L + K V+ M
Sbjct: 304 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 363
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +G PD+ +YNI++ G L L D M G +PDF+T+N+L+
Sbjct: 364 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 423
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ + N M++ G P V+ + T++ L R G +D F++M ++G PD Y +
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483
Query: 192 ITSYIAAGELEK-----------------------------------AQDLFDGMITKGQ 216
I + G L K AQ++FD + G
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 543
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ Y+ ++ G+C+ GK ++A + M S G PN +VY TLV+ G++ E
Sbjct: 544 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 603
Query: 277 VIRHMVEKG 285
+ R M+++G
Sbjct: 604 LFREMLQRG 612
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGKLDQFHRLLD 104
SY+ +L +L + + + + M++ G +P+++ YN V+ ++ G +++ L
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM + G PD TYN ++H L K A L M P+ + L+ G S G
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 316
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F EM +PDVV ++++ S G++++A+D+FD M KGQ P+VF+YN
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 376
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M+ G+ G + + M G P+F +N L+ N G L +A + M +
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436
Query: 285 G 285
G
Sbjct: 437 G 437
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 4 NGF-PTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
NGF AR + C G V L + R ++ + P ++Y ++
Sbjct: 81 NGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLS--PTSHTYAILMDCCTRAH 138
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-FHRLLDEMGRSGFSPDFHTY 118
+ +L + Q+ G +I+ N ++ + D+ LL G PD +Y
Sbjct: 139 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 198
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ILL L K A +LL M E G P+V+ + T++DG + G+++ F EM
Sbjct: 199 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 258
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD+V Y ++ + A ++KA+ M+ K LPN +TYN++I G+ G++
Sbjct: 259 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 318
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + KEM P+ + + L+ +L GK+ EA +V M KG+
Sbjct: 319 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 368
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TFN+LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 398 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 457
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G APD YN ++ G L + L+ E+ +G D ++
Sbjct: 458 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 517
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P + ++ LMDG G ++ FD M + G
Sbjct: 518 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 577
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y G +++ LF M+ +G P+ Y+ +I G AG+ A
Sbjct: 578 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 637
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G + YN ++ L
Sbjct: 638 MKFHEMTESGIAMDICTYNIVLRGL 662
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G +N LI CT G + A++++ + + + F +++I++ L
Sbjct: 468 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF---FSSIINNLCK 524
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ + G PD + Y+++M +GK+++ R+ D M +G P+
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ K + L+L M + G PS + ++ ++DGL +AG K F EM
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMT 644
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G D+ Y +++ ++A LF + N+ T N+MI G + +
Sbjct: 645 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 704
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + PN + Y+ +++NL G + EA ++ M G
Sbjct: 705 EAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G P + Y+I++ ++ G+ EM SG + D TYNI+L L
Sbjct: 604 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLF 663
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L ++ + +++ T++DG+ + ++ K F ++ +P+VV
Sbjct: 664 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVV 723
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++MIT+ I G +E+A+D+F M G PN N ++R + A + ++
Sbjct: 724 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 783
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ R + L LV + G E
Sbjct: 784 DERNFSLEHLTAMLLVDLFSSKGTCRE 810
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-------FFDEMANKGCM 182
+P A +LL+ ++ G + L+RA + AC+ F+ A++
Sbjct: 57 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 116
Query: 183 PDVVC-----YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P V+ Y +++ A E A F ++ G N+ N ++ GFC A + D
Sbjct: 117 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 176
Query: 238 EAC-TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ GC P+ Y+ L+ +L + GK +A +++R M E G
Sbjct: 177 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 225
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 145/289 (50%), Gaps = 12/289 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+NG F LI C G+ + K++ + +K FRP Y +++H G
Sbjct: 33 MIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALK----RFRPDVFLYTSVIH---G 85
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ Y + + D+++Y V+ ++D+ L +E+ +G SP+
Sbjct: 86 YCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVA 145
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEM 176
Y ++ L K + L M P+ +T ++DGL +A L DACK F++M
Sbjct: 146 YTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK-VFEQM 204
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
KGC+PD + YT +I + A ++++A+ L D M+TKG P TY S++ GFC
Sbjct: 205 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMI 264
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EA ++ +M RGC P ++ +L+S + G+ EA++V+ M +G
Sbjct: 265 NEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 313
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
L+ + G V AR V + I+ P +Y I+ I + + + M+ G
Sbjct: 327 LLFSTGRVPEARHVFDSMIEK---GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 383
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
PD YN +M +L ++DQ + D M SG P+ T+N+L+H L K K A
Sbjct: 384 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 443
Query: 136 NLLNHMKE-VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+L M E P+++ +T L+DGL +AG + F EM ++G +P+ YT +I S
Sbjct: 444 SLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYS 503
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
AG + +A+ L + M+ G P+V Y+++I G + D A + +EM RGC PN
Sbjct: 504 LAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 563
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRH 280
+ Y L R AG+ + V +H
Sbjct: 564 EVTYKVLRRGFRAAGRALDLEAVKQH 589
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +Y ++ L + V++QM +G PD +TY ++ + K+D+ +L
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LD M G P TY ++H K D A ++ M+E G +P + FT+L+
Sbjct: 236 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + EM +GC PDV+ YT +I + G + +A+ +FD MI KG P+ T
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I+ F G + A +++ M G P+ YN+L+ ++ +A V MV
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415
Query: 283 EKG 285
G
Sbjct: 416 ASG 418
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 1/239 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y +++ L + V+ M ++G APD LTY ++ ++G ++ +L+ M
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+SG PD YN L+ K ++ A + + M G P+ + F LM GL + G D
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 440
Query: 168 ACKYFFDEMANKGCMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F EM K +P +V YT++I AG + +A F MI +G +P TY S+
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSL 500
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I AG+ EA ++++M G NP+ Y+ L++ L ++ + A +V + M+++G
Sbjct: 501 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 559
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ LI ++ ARK+++ + P +Y +I+H
Sbjct: 204 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK---GPEPTAVTYGSIVHGFCK 260
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V QM + G P + + ++ G+ ++ +++L EM G +PD
Sbjct: 261 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVIL 320
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ +L + A ++ + M E G P L + T++ S+ GN++A + MA
Sbjct: 321 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 380
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD Y ++ Y+ +++A ++D M+ G PN T+N ++ G GK D
Sbjct: 381 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 440
Query: 238 EACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ KEM E P + Y L+ L AG+++EA + M+++G
Sbjct: 441 RAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 111/244 (45%), Gaps = 35/244 (14%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G P I++YN V+ + K+D+ ++ + M +G PD + L+H K +P
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD--------------------------- 167
LLN + F P V +T+++ G +AG+LD
Sbjct: 62 HKLLNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120
Query: 168 ------ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
AC+ F+E+ GC P+VV YT +I + AG +E F+ M +P
Sbjct: 121 SKRIDEACE-LFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +I G C A +AC + ++M +GC P+ + Y TL+ A K+ EA +++ M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239
Query: 282 VEKG 285
+ KG
Sbjct: 240 LTKG 243
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F + K P +Y A++ LL + + +++MS P TY +V+
Sbjct: 129 ELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGL 188
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ L ++ ++M + G PD TY L+ K K A LL+ M G +P+
Sbjct: 189 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 248
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + +++ G + ++ K +M +GC P + +T +++ Y++ G E+A +
Sbjct: 249 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 308
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M +G P+V Y S+I G+ EA + M +GC P+ L Y T++ N G
Sbjct: 309 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 368
Query: 271 LAEAHEVIRHMVEKG 285
+ A E++ M + G
Sbjct: 369 VEAAGEILELMAKSG 383
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 33/170 (19%)
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
+G +P+++ + T++ GL+ +D FF+ M + GC PDV+ +T +I + AG+ +
Sbjct: 1 MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAG----------------------------- 234
L + + + + P+VF Y S+I G+C AG
Sbjct: 61 GHKLLNQALKRFR-PDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119
Query: 235 ---KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ DEAC + +E+++ GC+PN + Y ++ L AG++ + + M
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEM 169
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 144/279 (51%), Gaps = 7/279 (2%)
Query: 14 NILIC-TCGEVGLARKVVE---RFIKS-KLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
N+LIC T +V + +E RF++ ++ P +YN ++ + + + +
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGK 127
+ M +G PD ++Y +M + ++ + L+ +M + G PD TYN L+H+L K
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVV 186
D AL L +E GF L ++ ++ L + G + K +EM +KG C PDVV
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ + GE++KA+ L M T G PN +Y +++ G C GK EA MM
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E +PN + Y+ ++ LR GKL+EA +V+R MV KG
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 554
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 139/284 (48%), Gaps = 1/284 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E+G T+N LI + A + + ++ FR K Y+AI+HAL +
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 63 LIEWVYQQMSDEGY-APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M +G+ PD++TY V+ RLG++D+ +LL M G P+ +Y L
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L+ + + K L A ++N +E + P+ + ++ +M GL R G L EM KG
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P V +++ S G +A+ + + KG NV + ++I GFC + D A +
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M + + Y TLV L G++AEA E+++ M+ KG
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 659
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 101/205 (49%), Gaps = 1/205 (0%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
++ VM + R G+L ++L M R+G P+ N + V + ++ AL L M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ VG P+V+ + ++ G ++ ++M +KGC+PD V Y ++ +
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 202 EKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +DL M + G +P+ TYN++I DEA +K+ + +G + L Y+
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
+V L G+++EA ++I M+ KG
Sbjct: 424 IVHALCKEGRMSEAKDLINEMLSKG 448
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ D Y +L VL K + +L MK G + F+ +M SRAG L
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M G P+++ I ++ A LEKA + M G +PNV TYN MIRG+
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
C + +EA ++++M S+GC P+ + Y T++ L ++ E ++++ M ++
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+ P +Y+ I+H L R+ KL E V ++M +G+ P + N+++ + R G+ +
Sbjct: 520 WSPNSITYSVIMHGLR--REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 577
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ ++E G + + + ++H + D+ AAL++L+ M + V +TTL+D
Sbjct: 578 ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 637
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + G + +M +KG P V Y +I Y G+++ + + MI++ +
Sbjct: 638 TLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR 697
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMM 243
+ YN +I C+ GK +EA T++
Sbjct: 698 TI--YNQVIEKLCVLGKLEEADTLL 720
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
DP V + ++++ LS+ + M +G ++ ++ SY AG+L A
Sbjct: 206 DPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+ M G PN+ N+ I F A + ++A ++ M+ G PN + YN ++
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 267 NAGKLAEAHEVIRHMVEKG 285
+ ++ EA E++ M KG
Sbjct: 324 DLHRVEEAIELLEDMHSKG 342
>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 9/292 (3%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQYKLIEWVYQQ 70
+ LI G R+ V F K + RP +YN IL+ +G+ K+ V
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV-DS 281
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G APD+ TYN ++ + R ++ + +EM +GFSPD TYN LL V GK +
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P A+ +L M+ GF PS++ + +L+ +R G LD +M KG PDV YT
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+++ + G+ + A +F+ M G PN+ T+N++I+ G F E + +E++
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKR 296
C P+ + +NTL++ G +E V + M E+ + L+S + R
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSR 513
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T+N LI +C L + E F + K F P K +YNA+L R+
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V ++M G+AP I+TYN ++ A R G LD+ L +M + G PD TY
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL K K A+ + M+ G P++ F L+ GN F+E+
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PD+V + ++ + G + +F M G +P T+N++I + G FD+A
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM 521
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + M G P+ YN +++ L G ++ +V+ M
Sbjct: 522 AIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM 562
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDE 105
+Y +++ A +Y+ V++++ +EG P ++TYN+++ ++G + L+D
Sbjct: 222 AYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS 281
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M SG +PD +TYN L+ +G A + MK GF P + + L+D ++
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM G P +V Y +I++Y G L++A +L M+ KG P+VFTY +
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++ GF GK D A + +EM GC PN +N L+ N G E +V +
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 1/284 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIRQY 61
E G T T+N+++ G++G+ + + S K P +YN ++ + Y
Sbjct: 248 EEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLY 307
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+++M G++PD +TYN ++ + + + +L EM SGF+P TYN L
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + A+ L + M + G P V +TTL+ G + G D F+EM GC
Sbjct: 368 ISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++ + +I + G + +F+ + +P++ T+N+++ F G E
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G P +NTL+S G +A + R M++ G
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAG 531
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 128/281 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+N ++ GL + + + K +P + +Y ++LHA ++
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 586
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + +++ P + ++ + L + R E+ GFSPD T N
Sbjct: 587 VERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA 646
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + G+ +LN +K+ GF PS+ + +LM SR + + + E+ KG
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD++ + +I +Y G +++A +F M G P+V TYN+ I + F EA
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAI 766
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++K M GC PN YN+L+ + EA I ++
Sbjct: 767 DVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNL 807
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 96/190 (50%), Gaps = 2/190 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + ++ ++G++PDI T N ++ R + + + +L+ + SGF+P TYN L+++
Sbjct: 626 ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYM 685
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + + ++L + G P ++ F T++ R G + F EM + G PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ Y I SY + +A D+ MI G PN TYNS+I FC + DEA + +
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFIS 805
Query: 245 EMESRGCNPN 254
+ R +P+
Sbjct: 806 NL--RNLDPS 813
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ R+ +E + + F P +YN+++ A
Sbjct: 321 GFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEA 380
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ QM +G PD+ TY ++ + GK D ++ +EM +G P+ T+N L+ +
Sbjct: 381 MELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKM 440
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
G + + + +K P ++ + TL+ + G F EM G +P+
Sbjct: 441 HGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 500
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ +I++Y G ++A ++ M+ G P++ TYN+++ G ++++ ++
Sbjct: 501 RDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKL----AEAHEVIRHMVE 283
EM+ C PN L Y +L+ N ++ A A E+ ++E
Sbjct: 561 EMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIE 603
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNSYNAILHALLGI 58
M +GF + T+N LI GL + +E +KS++ +P +Y +L
Sbjct: 352 MEASGFAPSIVTYNSLISAYARDGLLDEAME--LKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ V+++M G P+I T+N ++ G + ++ +E+ PD T+
Sbjct: 410 GKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTW 469
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N LL V G+ + MK GF P F TL+ SR G D + M +
Sbjct: 470 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PD+ Y ++ + G E+++ + M PN TY S++ + + +
Sbjct: 530 AGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVER 589
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ S P ++ TLV + L E + E+G
Sbjct: 590 MSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQG 636
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 135/309 (43%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI G G ++++ F + K+ P ++N +L + V+++M
Sbjct: 433 TFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 492
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG--- 128
G+ P+ T+N ++ A R G DQ + M +G +PD TYN +L L +G
Sbjct: 493 KRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLW 552
Query: 129 ---DKPLAA----------------LNLLNHMKEVG-------------FDPSVLHFTTL 156
+K LA L+ + KEV +P + TL
Sbjct: 553 EQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIEPQAVLLKTL 612
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ S++ L + F E+ +G PD+ M++ Y + K ++ + + G
Sbjct: 613 VLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGF 672
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ TYNS++ + F+++ +++E+ ++G P+ + +NT++ G++ EA
Sbjct: 673 TPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASR 732
Query: 277 VIRHMVEKG 285
+ M + G
Sbjct: 733 IFAEMKDFG 741
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ VLGK + A +LL+ ++ G + +T+L+ + G F ++ +
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 180 GCMPDVVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC P ++ Y V++ Y G K L D M + G P+++TYN++I ++E
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + +EM++ G +P+ + YN L+ + + EA EV++ M G Y L+S
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 293 KFKR 296
+ R
Sbjct: 370 AYAR 373
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
E GF T N ++ G + K E FIK F P +YN++++
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS--GFTPSLTTYNSLMYMYSRTEH 691
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +++ +G PDI+++N V+ A R G++ + R+ EM G +PD TYN
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNT 751
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + A++++ +M + G P+ + +L+D + D F + N
Sbjct: 752 FIASYASDSMFIEAIDVVKYMIKNGCKPNQNTYNSLIDWFCKLNRRDEASSFISNLRN 809
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 125/249 (50%), Gaps = 1/249 (0%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+FR YN ++ L R+ + + M+ GY ++TY ++ + G LD
Sbjct: 5 HFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAA 64
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL +M +G +P+ TY L+ L K +P A+ + M G +P ++ + +L+ G
Sbjct: 65 QALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHG 124
Query: 160 LSRAGNLDACKYFFDE-MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L A +D E M G +PDVV Y I+ AG+L+K ++ + M G P
Sbjct: 125 LCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISP 184
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V T+ S+I G C A + D+A + K M RGC P+ L Y+ ++ NL A +L EV+
Sbjct: 185 DVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVL 244
Query: 279 RHMVEKGKY 287
HMV+ G Y
Sbjct: 245 EHMVKSGHY 253
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 148/324 (45%), Gaps = 43/324 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+ LI C A + V+R ++S P +YN+++H L
Sbjct: 71 MADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRS---GCEPDLVTYNSLIHGLCM 127
Query: 58 IRQYKLIEWVYQQ-MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ V Q+ M + G PD++TYN + + GKLD+ +L+EM R G SPD
Sbjct: 128 ANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVV 187
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+ ++ L K ++ A + M E G P L ++ ++D LSRA LD + + M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEK--------------------------------- 203
G Y +I + I AG++E
Sbjct: 248 VKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKF 307
Query: 204 --AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFLVYNT 260
A+++ GMI G LPN+ +YN +I G C +G D+A + ++M G C P+ + +NT
Sbjct: 308 PLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNT 367
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEK 284
L+S AG+L++A ++++ M K
Sbjct: 368 LISGFCKAGRLSQAQQLLKEMKAK 391
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 100/181 (55%), Gaps = 1/181 (0%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M F D YN L+ L K KP AL LL+ M G+D SV+ +TTL+DGL ++G+
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LDA + +MA+ GC P+VV YT +I A A M+ G P++ TYNS
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 226 MIRGFCMAGKFDEACTMMKE-MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I G CMA + D+A +++E M G P+ + YNT +S L AGKL + E++ M
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180
Query: 285 G 285
G
Sbjct: 181 G 181
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 133/296 (44%), Gaps = 7/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG+ + T+ LI C G++ A+ ++++ + P +Y A++ L
Sbjct: 36 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADA---GCAPNVVTYTALIDGLCK 92
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE-MGRSGFSPDFH 116
R+ ++M G PD++TYN ++ ++D +L E M SG PD
Sbjct: 93 ARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVV 152
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN + L K K L +L M G P V+ F +++ GL +A +D F M
Sbjct: 153 TYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGM 212
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+GC+PD + Y++M+ + A L+ +++ + M+ G TY +I AG
Sbjct: 213 LERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDI 272
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ A ++ GC +N + L +GK A ++ M+E G +L+S
Sbjct: 273 ESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLS 328
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 7/219 (3%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M+ + D YN ++ + K LL M +G+ TY L+ L K
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA LL M + G P+V+ +T L+DGL +A M GC PD+V Y
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 191 MITSYIAAGELEKA----QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+I A ++ A Q+L MI G++P+V TYN+ I G C AGK D+ M++EM
Sbjct: 121 LIHGLCMANRMDDAGLVLQEL---MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G +P+ + + +++S L A ++ +A +V + M+E+G
Sbjct: 178 DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERG 216
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 37/287 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE+G T+N I + G K +E + P ++ +I+ L +
Sbjct: 142 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANR 201
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG-------FSP 113
V++ M + G PD LTY+I++ R +LD +L+ M +SG ++P
Sbjct: 202 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAP 261
Query: 114 DFH----------------------------TYNILLHVLGKGDKPLAALNLLNHMKEVG 145
H T+N + L + K A N+L M E G
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-PDVVCYTVMITSYIAAGELEKA 204
P++L + ++DGL ++GN+D +M + GC PDV+ + +I+ + AG L +A
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381
Query: 205 QDLFDGMITKGQ-LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
Q L M K +P+V TYN+MI G G +A +++EM++ G
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
Length = 798
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 49/327 (14%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+N L +C G ARKV + +K +P + Y +LH
Sbjct: 267 MCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKK---GHKPDSSIYGTLLHGYAT 323
Query: 58 ----IRQYKLIE-------------------------------WVYQQMSDEGYAPDILT 82
++ ++L++ + +M +G P+I+T
Sbjct: 324 EGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVT 383
Query: 83 YNIVMCAKYRLGKLD----QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
Y VM A R+GK+D QF RL+ E G +P+ + L+H L DK A L
Sbjct: 384 YGTVMDALCRVGKVDDAMSQFDRLISE----GLTPNGVVFRTLIHGLCACDKWDKAEELA 439
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M G P+ + F TL++ L + G + K FD M DV+ YT +I Y
Sbjct: 440 VEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLD 499
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G++++A L +GM+ G PN TYN++I G+C G+ ++AC++ ++M S+G NP ++Y
Sbjct: 500 GKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIY 559
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+T++ L ++A A E+ M++ G
Sbjct: 560 STILHGLFQTRRIAAAKELYLWMIKCG 586
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 134/292 (45%), Gaps = 9/292 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I G+ A TF+ L+ C A + R + + P SYN +L L
Sbjct: 122 VIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPA--LGCTPNAFSYNILLKGLCD 179
Query: 58 I-RQYKLIEWVYQQMSDE---GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
R + + ++ M+D+ G PD+++Y V+ R G+LD+ + L DEM G SP
Sbjct: 180 ENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSP 239
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TYN LLH KP A+ + M G +P V+ + TLM L + G + F
Sbjct: 240 NCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVF 299
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M KG PD Y ++ Y G L + L D M+ G P+ + +N +I +
Sbjct: 300 DSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKH 359
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DEA +M +G +PN + Y T++ L GK+ +A ++ +G
Sbjct: 360 GMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 141/320 (44%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+N L+ G ++ + F K P +YN ++ L +
Sbjct: 232 MLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGR 291
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V+ M +G+ PD Y ++ G L Q H+LLD M R+G PD + +NI
Sbjct: 292 SMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNI 351
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K A+ + M++ G P+++ + T+MD L R G +D FD + ++G
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEG 411
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN--------------------- 219
P+ V + +I A + +KA++L MI +G PN
Sbjct: 412 LTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAK 471
Query: 220 --------------VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
V TY ++I G+C+ GK DEA +++ M G PN + YNT+++
Sbjct: 472 NIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGY 531
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G++ +A + R M KG
Sbjct: 532 CKNGRIEDACSLFRQMASKG 551
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY +++ LL Q ++ +M D+G +P+ +TYN ++ GK + +
Sbjct: 204 PDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGI 263
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+M R G PD TYN L+ L K + + A + + M + G P + TL+ G +
Sbjct: 264 FRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYAT 323
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G PD + ++I +Y G +++A F M +G PN+ T
Sbjct: 324 EGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVT 383
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +++ C GK D+A + + S G PN +V+ TL+ L K +A E+ M+
Sbjct: 384 YGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMI 443
Query: 283 EKG 285
+G
Sbjct: 444 GRG 446
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 107/212 (50%), Gaps = 5/212 (2%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL- 137
D+ TY+IV+ R G LD L + R+G++ T++ LL L + A+++
Sbjct: 95 DLCTYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM----ANKGCMPDVVCYTVMIT 193
L M +G P+ + L+ GL + M GC PDVV YT +I
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G+L+KA LFD M+ +G PN TYN ++ G+C +GK EA + ++M G P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YNTL+ L G+ EA +V MV+KG
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKG 306
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 129/289 (44%), Gaps = 11/289 (3%)
Query: 12 TFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWV 67
T++I+I C G LA + R I++ + +++ +L L R ++
Sbjct: 98 TYSIVIGCCSRAGHLDLAFAALGRVIRT---GWTAQAITFSPLLKGLCHDKRTSDAMDIA 154
Query: 68 YQQMSDEGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++M G P+ +YNI++ C + R + L H ++ + R G PD +Y +++
Sbjct: 155 LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVIN 214
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + + A L + M + G P+ + + L+ G +G F +M G P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV Y ++ G +A+ +FD M+ KG P+ Y +++ G+ G + ++
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M G P+ ++N L+ G + EA M ++G + ++V+
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVT 383
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 109/265 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNILI + G+ + + F K + P +Y ++ AL + +
Sbjct: 337 MVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGK 396
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ EG P+ + + ++ K D+ L EM G P+ +N
Sbjct: 397 VDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNT 456
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL+ L K A N+ + M V V+ +TTL+DG G +D + M G
Sbjct: 457 LLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDG 516
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y +I Y G +E A LF M +KG P + Y++++ G + A
Sbjct: 517 VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
+ M G YN ++ L
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGL 601
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 125/312 (40%), Gaps = 41/312 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I G F LI C C + A ++ I + P +N +L+ L
Sbjct: 407 LISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGIC---PNTIFFNTLLNHLCK 463
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M D++TY ++ GK+D+ +LL+ M G P+ T
Sbjct: 464 EGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVT 523
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +++ K + A +L M G +P ++ ++T++ GL + + A K + M
Sbjct: 524 YNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMI 583
Query: 178 NKG-------------------CMPDVV----------------CYTVMITSYIAAGELE 202
G C D + + +MI + + G +
Sbjct: 584 KCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHD 643
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+DLF ++ +G +PNV TY M++ G +E + +E GC + + N LV
Sbjct: 644 EAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALV 703
Query: 263 SNLRNAGKLAEA 274
L G++ +A
Sbjct: 704 GKLPQKGEVRKA 715
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 115/289 (39%), Gaps = 40/289 (13%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V A +R I L P + ++H L ++ E + +M G
Sbjct: 391 LCRVGKVDDAMSQFDRLISEGL---TPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGI 447
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ + +N ++ + G + + + D M R D TY L+ K A
Sbjct: 448 CPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATK 507
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL M G P+ + + T+++G + G + DAC F +MA+KG P +V Y+ ++
Sbjct: 508 LLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACS-LFRQMASKGVNPGIVIYSTILHGL 566
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM----------------------- 232
+ A++L+ MI G + TYN +++G C
Sbjct: 567 FQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQN 626
Query: 233 ------------AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
G+ DEA + + +RG PN + Y ++ +L G
Sbjct: 627 RTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 116/219 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M D G PD++TY V+ A R+GK+D ++M G +PD + YN L+
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
L A L++ + G ++ F+++++ L + G + + FD N G PD V
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 535
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++++ Y G++EKA +FD M++ G PNV Y +++ G+C G+ DE ++ +EM
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREM 595
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG P+ ++Y+ ++ L AG+ A M E G
Sbjct: 596 LQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESG 634
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G PD++TYN V+ A + +D+ L +M P+ TYN L++
Sbjct: 241 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 300
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ + M+ P V+ + LM L + G + + FD MA KG PDV
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +M+ Y G L DLFD M+ G P+ +T+N +I+ + G D+A + EM
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y T+++ L GK+ +A E M+++G
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L +++V+R I L +YN+++HAL R E +QM ++ P+ TYN
Sbjct: 241 LFKEMVQRGIPPDLV-------TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 293
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ G+ + R+ EM R PD T ++L+ L K K A ++ + M
Sbjct: 294 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 353
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G +P V + +++G + G L FD M G PD + V+I +Y G L+KA
Sbjct: 354 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 413
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+F+ M G P+V TY ++I C GK D+A +M +G P+ YN L+
Sbjct: 414 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 473
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G L +A E+I ++ G ++ +V
Sbjct: 474 FCTHGSLLKAKELISEIMNNGMHLDIV 500
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 137/309 (44%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI G ++ V F + + + P + + ++ +L + K V+ M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 350
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +G PD+ +YNI++ G L L D M G +PDF+T+N+L+
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 410
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ + N M++ G P V+ + T++ L R G +D F++M ++G PD Y +
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470
Query: 192 ITSYIAAGELEK-----------------------------------AQDLFDGMITKGQ 216
I + G L K AQ++FD + G
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ Y+ ++ G+C+ GK ++A + M S G PN +VY TLV+ G++ E
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 590
Query: 277 VIRHMVEKG 285
+ R M+++G
Sbjct: 591 LFREMLQRG 599
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGKLDQFHRLLD 104
SY+ +L +L + + + + M++ G +P+++ YN V+ ++ G +++ L
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM + G PD TYN ++H L K A L M P+ + L+ G S G
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 303
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F EM +PDVV ++++ S G++++A+D+FD M KGQ P+VF+YN
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M+ G+ G + + M G P+F +N L+ N G L +A + M +
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 285 G 285
G
Sbjct: 424 G 424
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 4 NGF-PTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
NGF AR + C G V L + R ++ + P ++Y ++
Sbjct: 68 NGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLS--PTSHTYAILMDCCTRAH 125
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-FHRLLDEMGRSGFSPDFHTY 118
+ +L + Q+ G +I+ N ++ + D+ LL G PD +Y
Sbjct: 126 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ILL L K A +LL M E G P+V+ + T++DG + G+++ F EM
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 245
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD+V Y ++ + A ++KA+ M+ K LPN +TYN++I G+ G++
Sbjct: 246 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 305
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + KEM P+ + + L+ +L GK+ EA +V M KG+
Sbjct: 306 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TFN+LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 385 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G APD YN ++ G L + L+ E+ +G D ++
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P + ++ LMDG G ++ FD M + G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y G +++ LF M+ +G P+ Y+ +I G AG+ A
Sbjct: 565 IEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAK 624
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G + YN ++ L
Sbjct: 625 VKFHEMTESGIAMDICTYNIVLRGL 649
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G +N LI CT G + A++++ + + + F +++I++ L
Sbjct: 455 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF---FSSIINNLCK 511
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ + G PD + Y+++M +GK+++ R+ D M +G P+
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ K + L+L M + G PS + ++ ++DGL +AG K F EM
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G D+ Y +++ ++A LF + N+ T N+MI G + +
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 691
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + P+ + Y+ +++NL G + EA ++ M G
Sbjct: 692 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G P + Y+I++ ++ G+ EM SG + D TYNI+L L
Sbjct: 591 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLF 650
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L ++ + +++ T++DG+ + ++ K F ++ +P VV
Sbjct: 651 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVV 710
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++MIT+ I G +E+A+D+F M G PN N ++R + A + ++
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKI 770
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ R + L LV + G E
Sbjct: 771 DERNFSLEHLTTMLLVDLFSSKGTCRE 797
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-------FFDEMANKGCM 182
+P A +LL+ ++ G + L+RA + AC+ F+ A++
Sbjct: 44 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 103
Query: 183 PDVVC-----YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P V+ Y +++ A E A F ++ G N+ N ++ GFC A + D
Sbjct: 104 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 163
Query: 238 EAC-TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ GC P+ Y+ L+ +L + GK +A +++R M E G
Sbjct: 164 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 212
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 130/247 (52%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F P SYNA+L L +++ ++ + ++M P+I+T+N ++ R G ++
Sbjct: 221 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
H +L +M G +PD Y ++ + K A +LN M G P+V+ + TL+
Sbjct: 281 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL A + + EM +K C D V + +++ + G +++ +L + M+ +G +P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMP 400
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TY ++I GFC G DEA ++K M + GC PN + Y ++ L +A + +A +++
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460
Query: 279 RHMVEKG 285
M+++G
Sbjct: 461 SQMIQQG 467
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 6/305 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN LI GL +V E + P Y I+ +
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M G P+++ YN ++ + ++ LL EM D T+NI
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + LL M E G P V+ +TT+++G + G +D M G
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + YT+++ +A A+DL MI +G N T+N++I C G ++A
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK------YIHLVSKF 294
++K+M GC+P+ + Y+T++ L AGK EA E++ MV KG Y + S
Sbjct: 493 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 552
Query: 295 KRYKR 299
R R
Sbjct: 553 SREGR 557
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 135/274 (49%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G R + +I C G + +A +++ R + +P YN +L L
Sbjct: 288 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS---YGLKPNVVCYNTLLKGLCS 344
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D+ D +T+NI++ + G +D+ LL++M G PD T
Sbjct: 345 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVIT 404
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL A + +M
Sbjct: 405 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 464
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC + + + +I G +E+A +L M+ G P++ +Y+++I G AGK D
Sbjct: 465 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 524
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ S L G++
Sbjct: 525 EALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+ +I + GL + V +P SY +L L +
Sbjct: 393 MLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + QM +G + +T+N ++ + G ++Q LL +M +G SPD +Y+
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 512
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ LGK K AL LLN M G P+ + ++++ LSR G ++ FD + +
Sbjct: 513 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 572
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D V Y +I+S GE E+A + M++ G +PN TY +IRG G EA
Sbjct: 573 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 632
Query: 241 TMMKEMESRG 250
M+ E+ S+G
Sbjct: 633 EMLTELCSKG 642
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 358 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVIN---GFCK 414
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + M+ G P+ ++Y IV+ + L+ +M + G + T
Sbjct: 415 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 474
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AG D + M
Sbjct: 475 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 534
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + ++ G + K +FD + + YN++I C G+ +
Sbjct: 535 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 594
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A + M S GC PN Y L+ L + G + EA E++ + KG HL+ F
Sbjct: 595 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHF 652
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 121/269 (44%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + A V++ + P Y+ IL A ++ V + + G
Sbjct: 132 LCARGRIADALAVLDEMPRRGCAPIPPM---YHVILEAACRGGGFRSAVRVLEDLHARGC 188
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
A D+ N+V+ A G +D+ LL ++ G PD +YN +L L +
Sbjct: 189 ALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE 248
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M + P+++ F TL+ L R G + +M GC PD+ Y +I
Sbjct: 249 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGIC 308
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G LE A ++ + M + G PNV YN++++G C A +++E ++ EM + C + +
Sbjct: 309 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 368
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N LV G + E++ M+E+G
Sbjct: 369 TFNILVDFFCQNGLVDRVIELLEQMLERG 397
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ TY V+ A G++ +LDEM R G +P Y+++L +G +A+ +
Sbjct: 120 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 179
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + G V + +++ + G++D + ++ + GC PDVV Y ++
Sbjct: 180 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 239
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A Q+L + M+ PN+ T+N++I C G F+ ++ +M GC P+ +
Sbjct: 240 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 299
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G L AHE++ M G
Sbjct: 300 YATIIDGICKEGHLEVAHEILNRMPSYG 327
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ R G+L+ RL + P+ +TY ++ L + AL +L+ M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + +++ R G + +++ +GC DV +++ + G ++
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L + + G P+V +YN++++G CMA ++ +M+EM C PN + +NTL+
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
S L G HEV+ MVE G
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHG 292
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D MI KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM + G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +M +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + +++S +N ++H
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHR 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ KL + V+ ++ G P +++N +M RLG LD+ RL + M SG PD
Sbjct: 146 FCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L N M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITK---WGLRPTAVSFNTLMNGYIRL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L +EM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD V YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M++EM S G P Y +++ G + ++++ M G +V+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Cucumis sativus]
Length = 831
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 144/292 (49%), Gaps = 9/292 (3%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQYKLIEWVYQQ 70
+ LI G R+ V F K + RP +YN IL+ +G+ K+ V
Sbjct: 223 YTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV-DS 281
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G APD+ TYN ++ + R ++ + +EM +GFSPD TYN LL V GK +
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P A+ +L M+ GF PS++ + +L+ +R G LD +M KG PDV YT
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+++ + G+ + A +F+ M G PN+ T+N++I+ G F E + +E++
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKR 296
C P+ + +NTL++ G +E V + M E+ + L+S + R
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSR 513
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 129/281 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T+N LI +C L + E F + K F P K +YNA+L R+
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V ++M G+AP I+TYN ++ A R G LD+ L +M + G PD TY
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL K K A+ + M+ G P++ F L+ GN F+E+
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICE 461
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PD+V + ++ + G + +F M G +P T+N++I + G FD+A
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM 521
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + M G P+ YN +++ L G ++ +V+ M
Sbjct: 522 AIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEM 562
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 117/236 (49%), Gaps = 1/236 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDE 105
+Y +++ A +Y+ V++++ +EG P ++TYN+++ ++G + L+D
Sbjct: 222 AYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS 281
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M SG +PD +TYN L+ +G A + MK GF P + + L+D ++
Sbjct: 282 MKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRR 341
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM G P +V Y +I++Y G L++A +L M+ KG P+VFTY +
Sbjct: 342 PREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTT 401
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++ GF GK D A + +EM GC PN +N L+ N G E +V +
Sbjct: 402 LLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEI 457
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 133/284 (46%), Gaps = 1/284 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIRQY 61
E G T T+N+++ G++G+ + + S K P +YN ++ + Y
Sbjct: 248 EEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLY 307
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+++M G++PD +TYN ++ + + + +L EM SGF+P TYN L
Sbjct: 308 EEAAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSL 367
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + A+ L + M + G P V +TTL+ G + G D F+EM GC
Sbjct: 368 ISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGC 427
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++ + +I + G + +F+ + +P++ T+N+++ F G E
Sbjct: 428 QPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSG 487
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G P +NTL+S G +A + R M++ G
Sbjct: 488 VFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLDAG 531
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 128/281 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+N ++ GL + + + K +P + +Y ++LHA ++
Sbjct: 527 MLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKE 586
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + +++ P + ++ + L + R E+ GFSPD T N
Sbjct: 587 VERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNA 646
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + G+ +LN +K+ GF PS+ + +LM SR + + + E+ KG
Sbjct: 647 MVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKG 706
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD++ + +I +Y G +++A +F M G P+V TYN+ I + F EA
Sbjct: 707 MKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAI 766
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++K M C PN YN+L+ + EA+ I ++
Sbjct: 767 DVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNL 807
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V F + K F P ++++N ++ A + +Y++M
Sbjct: 468 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRM 527
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G PD+ TYN V+ A R G +Q ++L EM P+ TY LLH G +
Sbjct: 528 LDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEV 587
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L + +P + TL+ S++ L + F E+ +G PD+ M
Sbjct: 588 ERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAM 647
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
++ Y + K ++ + + G P++ TYNS++ + F+++ +++E+ ++G
Sbjct: 648 VSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGM 707
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + +NT++ G++ EA + M + G
Sbjct: 708 KPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFG 741
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ R+ +E + + F P +YN+++ A
Sbjct: 321 GFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGLLDEA 380
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ QM +G PD+ TY ++ + GK D ++ +EM +G P+ T+N L+ +
Sbjct: 381 MELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKM 440
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
G + + + +K P ++ + TL+ + G F EM G +P+
Sbjct: 441 HGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 500
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ +I++Y G ++A ++ M+ G P++ TYN+++ G ++++ ++
Sbjct: 501 RDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLA 560
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKL----AEAHEVIRHMVE 283
EM+ C PN L Y +L+ N ++ A A E+ ++E
Sbjct: 561 EMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIYSGIIE 603
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + ++ ++G++PDI T N ++ R + + + +L+ + SGF+P TYN L+++
Sbjct: 626 ERAFLELREQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYM 685
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + + ++L + G P ++ F T++ R G + F EM + G PD
Sbjct: 686 YSRTEHFEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPD 745
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ Y I SY + +A D+ MI PN TYNS+I FC + DEA
Sbjct: 746 VITYNTFIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEA----- 800
Query: 245 EMESRGCNPNFLVYNTLVSNLRN 267
N+ +SNLRN
Sbjct: 801 --------------NSFISNLRN 809
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 118/287 (41%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNSYNAILHALLGI 58
M +GF + T+N LI GL + +E +KS++ +P +Y +L
Sbjct: 352 MEASGFAPSIVTYNSLISAYARDGLLDEAME--LKSQMVKKGIKPDVFTYTTLLSGFEKT 409
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ V+++M G P+I T+N ++ G + ++ +E+ PD T+
Sbjct: 410 GKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTW 469
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N LL V G+ + MK GF P F TL+ SR G D + M +
Sbjct: 470 NTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAMAIYRRMLD 529
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PD+ Y ++ + G E+++ + M PN TY S++ + + +
Sbjct: 530 AGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVER 589
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ S P ++ TLV + L E + E+G
Sbjct: 590 MSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQG 636
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 7/184 (3%)
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ VLGK + A +LL+ ++ G + +T+L+ + G F ++ +
Sbjct: 190 VIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYASNGRYREAVMVFKKLEEE 249
Query: 180 GCMPDVVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC P ++ Y V++ Y G K L D M + G P+++TYN++I ++E
Sbjct: 250 GCRPTLITYNVILNVYGKMGMPWSKIAGLVDSMKSSGVAPDLYTYNTLISSCRRGSLYEE 309
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + +EM++ G +P+ + YN L+ + + EA EV++ M G Y L+S
Sbjct: 310 AAEVFEEMKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLIS 369
Query: 293 KFKR 296
+ R
Sbjct: 370 AYAR 373
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 4/178 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
E GF T N ++ G + K E FIK F P +YN++++
Sbjct: 634 EQGFSPDITTLNAMVSIYGRRRMVSKTNEILNFIKDS--GFTPSLTTYNSLMYMYSRTEH 691
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +++ +G PDI+++N V+ A R G++ + R+ EM G +PD TYN
Sbjct: 692 FEKSEDILREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKDFGLAPDVITYNT 751
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + A++++ +M + P+ + +L+D + D F + N
Sbjct: 752 FIASYASDSMFIEAIDVVKYMIKNECKPNQNTYNSLIDWFCKLNRRDEANSFISNLRN 809
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I +GF T+N + C G V A KV++ ++ P +YN +++ L
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQE---GHDPDVFTYNTVINCLSKN 350
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + QM D G PD T+N ++ A +L++ L E+ G SPD +T+
Sbjct: 351 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTF 410
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P + L MK G P + + L+D L G L +EM +
Sbjct: 411 NILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMES 470
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC V Y +I + +E+A+++FD M +G + T+N++I G C A + D+
Sbjct: 471 NGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDD 530
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++++M G PN + YN+++++ G + +A +++ M G I +V+
Sbjct: 531 ATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVT 584
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T N LI R V + P + ++ ++ +
Sbjct: 188 MTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGS 247
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V +M + G +P +T N+++ ++G+++ + + GF PD TYN
Sbjct: 248 IEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNT 307
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+H L + AL +++ M + G DP V + T+++ LS+ G LD K ++M ++G
Sbjct: 308 FVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 367
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PD + +I + + LE+A DL + KG P+V+T+N +I C G
Sbjct: 368 CLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 427
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM+S GC P+ + YN L+ +L + GKL A +++ M G
Sbjct: 428 RLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 137/293 (46%), Gaps = 14/293 (4%)
Query: 1 MIENGFPTTARTFNILICTCGE-------VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G TFN LI + LAR++ + + ++ F N+ +
Sbjct: 363 MVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
LGIR ++++M G PD +TYNI++ +GKL LL+EM +G
Sbjct: 423 PHLGIR-------LFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPR 475
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN ++ L K + A + + M G S + F TL+DGL +A +D
Sbjct: 476 STVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELI 535
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M +G P+ + Y ++T Y G ++KA D+ + M G +V TY ++I G C A
Sbjct: 536 EQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKA 595
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G+ A +++ M +G P YN ++ +L L +A + R M E G+
Sbjct: 596 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGE 648
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 2/239 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N +L+ L+ + KL+E VY +M+ G PD++T N ++ A R ++ +L+EM
Sbjct: 165 FNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 224
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL- 166
G +PD T+ L+ + AAL + M E G P+ + L++G + G +
Sbjct: 225 SHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVE 284
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DA Y E+A+ G PD V Y + G + A + D M+ +G P+VFTYN++
Sbjct: 285 DALGYIQQEIAD-GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+ DEA ++ +M RGC P+ +NTL+ L + +L EA ++ R + KG
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKG 402
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 1/220 (0%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++ Q+++D G+ PD +TYN + + G + +++D M + G PD TYN +++ L
Sbjct: 289 YIQQEIAD-GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCL 347
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + A ++N M + G P F TL+ LS L+ E+ KG PDV
Sbjct: 348 SKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDV 407
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ ++I + G+ LF+ M + G P+ TYN +I C GK A ++ E
Sbjct: 408 YTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNE 467
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
MES GC + + YNT++ L ++ EA EV M +G
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 114/264 (43%), Gaps = 8/264 (3%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDE--GYAPDIL 81
GL R++ + + R F SY + R ++ V Q+ ++ G D +
Sbjct: 110 GLVREMRREGHQVRAVVVRSFVESYARLR------RFDDAVDLVLNQLDNDTFGVQADTV 163
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
+N ++ KL + +EM G PD T N L+ L + + A+ +L M
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEM 223
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G P FTTLM G G+++A +M GC P V V+I Y G +
Sbjct: 224 SSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRV 283
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A I G P+ TYN+ + G C G A +M M G +P+ YNT+
Sbjct: 284 EDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 343
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
++ L G+L EA ++ MV++G
Sbjct: 344 INCLSKNGELDEAKGIVNQMVDRG 367
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 11/282 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIRQYKLIEWV 67
T+NILI C+ G++G A ++ N P +YN I+ AL + + E V
Sbjct: 444 TYNILIDHLCSMGKLGNALDLLNEMES----NGCPRSTVTYNTIIDALCKKMRIEEAEEV 499
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN-ILLHVLG 126
+ QM +G + +T+N ++ + ++D L+++M + G P+ TYN IL H
Sbjct: 500 FDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCK 559
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+G+ AA ++L M GF+ V+ + TL++GL +AG M KG P
Sbjct: 560 QGNIKKAA-DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPK 618
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM-AGKFDEACTMMKE 245
Y +I S L A +LF M G+ P+ TY + R C G EA + E
Sbjct: 619 AYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVE 678
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
M ++G P F + L L N G I ++EK K+
Sbjct: 679 MVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKF 720
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 103/253 (40%), Gaps = 38/253 (15%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS--------------------- 109
++ E +AP Y ++ G D L+ EM R
Sbjct: 80 LAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRR 139
Query: 110 -----------------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
G D +N LL+VL +G K ++ N M G P V+
Sbjct: 140 FDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVT 199
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
TL+ L RA + +EM++ G PD +T ++ +I G +E A + M+
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P T N +I G+C G+ ++A +++ + G P+ + YNT V L G ++
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS 319
Query: 273 EAHEVIRHMVEKG 285
A +V+ M+++G
Sbjct: 320 HALKVMDLMLQEG 332
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 137/274 (50%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++N LI E G + V F++ K P +Y A++ L +K + + +M
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAM-GLLDEM 318
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ PD++TYN ++ + R G LD +RLL M G PD TY + L K ++
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L + + E G +V+ ++ L+DG + G +D F++M +K C P+ + +
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNAL 438
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I +AG L++A LFD M+ G P V+T+N +I G FD+A +++M S G
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P YN + +AGK+ EA +++ M E+G
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEG 532
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 15/291 (5%)
Query: 1 MIENGFPT---TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN--SYNAILHAL 55
MI+ G T+ +F + C +V A +V E P +N SYN ++H L
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM---------PNRNEVSYNQLIHGL 268
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ ++ +M D+ P++ TY ++ R + + LLDEM PD
Sbjct: 269 CEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDL 327
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ + +A LL+ MKE G P + +D L ++ ++ + FD
Sbjct: 328 ITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDS 387
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +G +V+ Y+V+I Y G++++A LF+ M++K PN +T+N++I G C AG
Sbjct: 388 LTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGN 447
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA ++ +M G P +N L+ + G +AH+ ++ M+ G+
Sbjct: 448 LKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 132/303 (43%), Gaps = 65/303 (21%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN +L L + +Y +M +E + DI T+N+++ ++G + + + + +M
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219
Query: 108 RSGFSPDFHT-------------------------------YNILLHVL---GKGDKPLA 133
++G SPD+ T YN L+H L G+ D+ ++
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGRIDEAVS 279
Query: 134 -------------------------------ALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
A+ LL+ M E P ++ + +L+ G R
Sbjct: 280 LFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCR 339
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG+LD+ M +G +PD Y I + +E+A+ LFD + +G NV
Sbjct: 340 AGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIM 399
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+ +I G+C GK DEA + ++M S+ C+PN +N L+ L +AG L EA + MV
Sbjct: 400 YSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV 459
Query: 283 EKG 285
+ G
Sbjct: 460 KMG 462
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 129/268 (48%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E T+N LI C G + A +++ + L P + +Y + L
Sbjct: 318 MLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLV---PDQRTYGCFIDFLCK 374
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +++EG + +++ Y++++ ++GK+D+ L ++M SP+ +T
Sbjct: 375 SNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYT 434
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+H L AL+L + M ++G P+V F L+ + + G+ D +M
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P Y I Y +AG++++A+D+ M +G P+ FTY S+I+ + G
Sbjct: 495 SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTY 554
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
A ++K M C P+ + +L+ L
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQL 582
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 126/313 (40%), Gaps = 35/313 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ A TFN LI C+ G + A + ++ +K L +P ++N ++ +L
Sbjct: 423 MLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGL---KPTVYTFNILIGRMLK 479
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q+M G P TYN + GK+ + ++ +M G PD T
Sbjct: 480 QGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFT 539
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM------------------DG 159
Y L+ GK +A ++L M + +PS F +L+ +
Sbjct: 540 YTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVES 599
Query: 160 LSRAGNL-----------DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+S G++ D F+EM GC PD CY +I+ L A L
Sbjct: 600 VSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLL 659
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
D M +G P+ +N++I C K+ EA ++++M G +P TL+ L
Sbjct: 660 DQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEE 719
Query: 269 GKLAEAHEVIRHM 281
G+ + V + +
Sbjct: 720 GETERGNSVFKKL 732
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 105/265 (39%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G P T+ LI G++GL + + P +++ +++ L R
Sbjct: 528 MKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKR- 586
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+V ++ + G ++ +++ + D L +EM + G +PD Y
Sbjct: 587 -----YVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEK 641
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + K + AL LL+ M++ G PS + F ++ + ++M G
Sbjct: 642 LISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSG 701
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P + +I GE E+ +F + G + + +I G G +E
Sbjct: 702 HSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFS 761
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
+ +EME GCN + Y+ L L
Sbjct: 762 QLFEEMEKNGCNFSPRTYSILTQKL 786
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic; AltName: Full=Protein PROTON GRADIENT
REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 3/265 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C V AR + E+F K +P +YN ++ LL ++ + V+ Q+ G
Sbjct: 760 CKHNNVSGARTLFEKFTKD--LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCI 817
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD+ TYN ++ A + GK+D+ L EM + T+NI++ L K AL+L
Sbjct: 818 PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDL 877
Query: 138 L-NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M + F P+ + L+DGLS++G L K F+ M + GC P+ Y ++I +
Sbjct: 878 YYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFG 937
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGE + A LF M+ +G P++ TY+ ++ CM G+ DE KE++ G NP+ +
Sbjct: 938 KAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVV 997
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
YN +++ L + +L EA + M
Sbjct: 998 CYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 137/292 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E GF A ++N LI + + +E + + L FRP +Y++++ L R
Sbjct: 179 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRD 238
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M G P++ T+ I + R GK+++ + +L M G PD TY +
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A + MK P + + TL+D S +LD+ K F+ EM G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PDVV +T+++ + AG +A D D M +G LPN+ TYN++I G + D+A
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ MES G P Y + +G A E M KG ++V+
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 120/251 (47%)
Query: 35 KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
K + F F SYN ++H LL R VY++M EG+ P + TY+ +M +
Sbjct: 178 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR 237
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+D LL EM G P+ +T+ I + VLG+ K A +L M + G P V+ +T
Sbjct: 238 DIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 297
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L+D L A LD K F++M PD V Y ++ + +L+ + + M
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +P+V T+ ++ C AG F EA + M +G PN YNTL+ L +L +A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 275 HEVIRHMVEKG 285
E+ +M G
Sbjct: 418 LELFGNMESLG 428
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 1/278 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA T+ + I G+ G + +E F K K P + NA L++L + +
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ + D G PD +TYN++M ++G++D+ +LL EM +G PD N L++
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K D+ A + MKE+ P+V+ + TL+ GL + G + F+ M KGC P+
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + + E+ A + M+ G +P+VFTYN++I G G+ EA
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+M+ + P+F+ TL+ + A + +A+++I + +
Sbjct: 668 QMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 106/215 (49%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D+G P++ TYN ++C R+ +LD L M G P +TY + + GK
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
++AL MK G P+++ + L++AG K F + + G +PD V Y +
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
M+ Y GE+++A L M+ G P+V NS+I A + DEA M M+
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + YNTL++ L GK+ EA E+ MV+KG
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 3/282 (1%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK-LI 64
P A T+N L+ G+ G ++ E + + ++N ++ L+ +
Sbjct: 817 IPDVA-TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDAL 875
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ Y MSD ++P TY ++ + G+L + +L + M G P+ YNIL++
Sbjct: 876 DLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILING 935
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK + AA L M + G P + ++ L+D L G +D ++F E+ G PD
Sbjct: 936 FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPD 995
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMIT-KGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
VVCY ++I + LE+A LF+ M T +G P+++TYNS+I +AG +EA +
Sbjct: 996 VVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY 1055
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E++ G PN +N L+ +GK A+ V + MV G
Sbjct: 1056 NEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1097
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 132/315 (41%), Gaps = 37/315 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TF I I G G + E + P +Y ++ AL R+
Sbjct: 253 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 312
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ V+++M + PD +TY I + ++ + LD + EM + G PD T+ IL+
Sbjct: 313 KEVFEKMKTGRHKPDRVTY-ITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K A + L+ M++ G P++ + TL+ GL R LD F M + G P
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKP 431
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV----------------------- 220
Y V I Y +G+ A + F+ M TKG PN+
Sbjct: 432 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 491
Query: 221 ------------FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
TYN M++ + G+ DEA ++ EM GC P+ +V N+L++ L A
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Query: 269 GKLAEAHEVIRHMVE 283
++ EA ++ M E
Sbjct: 552 DRVDEAWKMFMRMKE 566
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+F P +Y ++ L + + +++ M D G P+ YNI++ + G+ D
Sbjct: 886 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAA 945
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L M + G PD TY++L+ L + L+ +KE G +P V+ + +++G
Sbjct: 946 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIING 1005
Query: 160 LSRAGNLDACKYFFDEM-ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L ++ L+ F+EM ++G PD+ Y +I + AG +E+A +++ + G P
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
NVFT+N++IRG+ ++GK + A + + M + G +PN Y L
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 124/288 (43%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G TF IL+ C G G A ++ + P ++YN ++ LL
Sbjct: 354 MEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGIL---PNLHTYNTLICGLLR 410
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ M G P TY + + + G ++M G +P+
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L+ L K + A + +K++G P + + +M S+ G +D EM
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC PDV+ +I + A +++A +F M P V TYN+++ G GK
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + M +GC PN + +NTL L ++ A +++ M++ G
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 35/272 (12%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L AL + + + +V+ M D TY + + G L Q L +M
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMRE 181
Query: 109 SGFSPDFHTYNILLHV-----------------------------------LGKGDKPLA 133
GF + ++YN L+H+ LGK +
Sbjct: 182 FGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
+ LL M+ +G P+V FT + L RAG ++ M ++GC PDVV YTV+I
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ A +L+ A+++F+ M T P+ TY +++ F D EME G P
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + LV L AG EA + + M ++G
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 97/227 (42%), Gaps = 36/227 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +NILI G+ G A F
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALF--------------------------- 949
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++M EG PD+ TY++++ +G++D+ E+ SG +PD YN+
Sbjct: 950 --------KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ LGK + AL L N MK G P + + +L+ L AG ++ ++E+
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
G P+V + +I Y +G+ E A ++ M+T G PN TY +
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T + +I G + K + F + K +P +YN+++ L+ QY+ + +
Sbjct: 157 VTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHEL 216
Query: 68 YQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +MS+EG+ PD +TY+ ++ A +LG+ D RLL+EM +G P Y +++ +
Sbjct: 217 YNEMSNEGHCHPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFF 276
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K D AL+L M+ + P V +T L+ GL +AG +D +F+ EM + C PD V
Sbjct: 277 KLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTV 336
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKE 245
MI AG L+ LF+ M +PNV TYN++I+ F + E + +
Sbjct: 337 VMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFER 396
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
M+ G +P+ Y+ L+ ++ +A ++ M EKG Y L+ + KR
Sbjct: 397 MKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 3/237 (1%)
Query: 47 SYNAILHALL--GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+YN I+ AL R ++ W +++M G +P TY+I++ + ++++ LL+
Sbjct: 372 TYNTIIKALFESKSRVSEVFSW-FERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLE 430
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM GF P Y L+ LGK + A L +KE S + ++ L +AG
Sbjct: 431 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAG 490
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
LD FDEM+ GC P+V Y +++ A L++A M G LP++ +YN
Sbjct: 491 RLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYN 550
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++ G G A M+ M++ P+ + YNT++S L +AG EA E+++ M
Sbjct: 551 IILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEM 607
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 132/317 (41%), Gaps = 36/317 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG TA+ + ++I ++ + F + + RP +Y ++ L +
Sbjct: 256 MKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGR 315
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR------------ 108
Y +M E PD + N ++ + G+LD +L +EMG
Sbjct: 316 IDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNT 375
Query: 109 ------------------------SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
SG SP TY+IL+ K ++ A+ LL M E
Sbjct: 376 IIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEK 435
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
GF P + +L+D L +A D F E+ Y VMI AG L+ A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDA 495
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+LFD M G PNV+ YN+++ G A DEA T M++M+ GC P+ YN +++
Sbjct: 496 INLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNG 555
Query: 265 LRNAGKLAEAHEVIRHM 281
L G A E++ +M
Sbjct: 556 LAKTGGPHRAMEMLTNM 572
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 41/245 (16%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF---SPDFHTYNILLHVLGKGDKPL 132
Y D TY ++ + + + +++ EM RS +P + ++ +LG
Sbjct: 119 YQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTP--MELSQVIRMLGNAKMIG 176
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVM 191
A+ + +K P+ + +++ L G + ++EM+N+G C PD V Y+ +
Sbjct: 177 KAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSAL 236
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQL---------------------------------- 217
I+++ G + A L + M G
Sbjct: 237 ISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYC 296
Query: 218 -PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+VFTY +IRG AG+ DEA EM+ C P+ +V N +++ L AG+L + +
Sbjct: 297 RPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLK 356
Query: 277 VIRHM 281
+ M
Sbjct: 357 LFEEM 361
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 71/160 (44%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G+ G + F + P +YNA++ L
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLD 528
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++M + G PDI +YNI++ + G + +L M S PD +YN +L
Sbjct: 529 EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L A L+ M +GF+ ++ ++++++ + +
Sbjct: 589 SALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P NSYN IL+ L + M + PD ++YN V+ A G ++ L
Sbjct: 544 PDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAEL 603
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ EM GF D TY+ +L +GK D+
Sbjct: 604 MKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++NI++ + G + +E K +P SYN +L AL
Sbjct: 537 MQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGM 596
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
++ + ++M+ G+ D++TY+ ++ A +GK+DQ
Sbjct: 597 FEEAAELMKEMNALGFEYDLITYSSILEA---IGKVDQ 631
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G+V A KV + + P YNA++ ++ +M D G +
Sbjct: 194 CKVGKVEDATKVFDEMLTEG--KVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVS 251
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TYN+ + + G+ + H L++EMG G +PD TYNIL++ K K A+ +
Sbjct: 252 MTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKM 311
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
M G +V+ +T+L+ LS G + F++ +G PD+ Y +I S+
Sbjct: 312 FEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCT 371
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G++++A ++ M K P+ TYN+++RG C+ G+ DEA +++EM RG P+ +
Sbjct: 372 GGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVS 431
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL+S G + +A +V M+ KG
Sbjct: 432 YNTLISGYSMKGDIKDAVKVRDEMMGKG 459
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T T+N+ + T G A +VE + L P +YN +++
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGL---APDAFTYNILINGYCK 301
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K +++ M +G ++TY ++ A G + + RL ++ R G PD
Sbjct: 302 EGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFM 361
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ G A ++ M++ P + + TLM GL G LD + +EM
Sbjct: 362 YNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMT 421
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD+V Y +I+ Y G+++ A + D M+ KG P + TYN+MI+G C+ G+
Sbjct: 422 KRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGG 481
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
+A ++KEM G P+ Y +L+ L
Sbjct: 482 DAEDLVKEMVGNGITPDDSTYISLIEGL 509
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 129/287 (44%), Gaps = 6/287 (2%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A T+N +I C G V +++ + P K +Y ++ + + +
Sbjct: 147 AVTYNTVIAGFCARGRVQAGIEIMREMRERG--GIAPDKYTYATVISGWCKVGKVEDATK 204
Query: 67 VYQQMSDEG-YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V+ +M EG P+ + YN ++ G L+ R EM G S TYN+ +H L
Sbjct: 205 VFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ A L+ M E G P + L++G + G F+ M KG V
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V YT +I + G +++ LF+ + +G P++F YN++I C G D A +M E
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
ME + P+ + YNTL+ L G+L EA +I M ++G LVS
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVS 431
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 6/171 (3%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+NI+L L KP+ AL LL M P+ + + T++ G G + A EM
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMREM 173
Query: 177 ANKGCM-PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAG 234
+G + PD Y +I+ + G++E A +FD M+T+G++ PN YN++I G+C G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A EM RG + YN V L G+ AEAH ++ M EKG
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKG 284
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 88/207 (42%), Gaps = 2/207 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T T+ LI G+ ++ F + RP YNA++++
Sbjct: 315 MVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGD 374
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + PD +TYN +M LG+LD+ L++EM + G PD +YN
Sbjct: 375 MDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNT 434
Query: 121 LLHVLG-KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ KGD A+ + + M GF+P++L + ++ GL G + EM
Sbjct: 435 LISGYSMKGDIK-DAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGN 493
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQD 206
G PD Y +I E A D
Sbjct: 494 GITPDDSTYISLIEGLTTEDERLAAGD 520
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ +M+ AG+ +A +L M + PN TYN++I GFC G+ +M+
Sbjct: 116 TTTFNIMLRHLCTAGKPVRALELLRQMPS----PNAVTYNTVIAGFCARGRVQAGIEIMR 171
Query: 245 EMESR-GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EM R G P+ Y T++S GK+ +A +V M+ +GK
Sbjct: 172 EMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGK 214
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V R+ E F + P + +Y +++ I Q + E + M G
Sbjct: 248 CRAGNV---RRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVG 304
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ + +N ++ R G +D ++ M + G D +TYN L L + ++ A L
Sbjct: 305 HNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTL 364
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M E G P+ + +TTL+ + G++ + F EMA KG MP VV Y VM+ YI
Sbjct: 365 LHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIK 424
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A+ M KG +P+V+TY S++ G C+ GK D A + +EM+ RG PN +
Sbjct: 425 KGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVA 484
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y L+S L G+ EA ++ M++ G
Sbjct: 485 YTALISGLAKEGRSEEAFQLYDDMLKAG 512
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L ++V+ + G++D LLDEM R G + YN LL + LL
Sbjct: 133 LAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELLEI 192
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G + +V +T L+D LS AG++ + DEM K DV YT +I +Y AG
Sbjct: 193 MENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGN 252
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A ++FD + G PN TY +I GFC G+ + A ++ +M+ RG N +++NT
Sbjct: 253 VRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNT 312
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ G + A +V M + G
Sbjct: 313 MIDGYCRQGMVDNALKVKAAMEKMG 337
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 130/286 (45%), Gaps = 16/286 (5%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-- 56
+ NG RT+ +LI C G++ A + L + + +N I+ +
Sbjct: 264 VGNGIEPNERTYGVLINGFCKIGQMEAAEML--------LADMQGRGVGHNQIIFNTMID 315
Query: 57 GIRQYKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G + +++ V M G D+ TYN + C R+ ++ + LL M G P
Sbjct: 316 GYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPP 375
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
++ TY L+ + K + A L M G PSV+ + +MDG + G++ + F
Sbjct: 376 NYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFR 435
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM KG +PDV Y ++ + G+++ A LF+ M +G PNV Y ++I G
Sbjct: 436 KEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKE 495
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
G+ +EA + +M G P+ +Y+ LV +L + H+ I+
Sbjct: 496 GRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDIHHKQIK 541
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++ +L +E V +M + A D+ Y V+ A R G + + + DE
Sbjct: 204 TYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDEC 263
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+G P+ TY +L++ K + AA LL M+ G + + F T++DG R G +
Sbjct: 264 VGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMV 323
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D M G DV Y + + +A+ L MI KG PN TY ++
Sbjct: 324 DNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTL 383
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C G EA + +EM +G P+ + YN ++ G + EA + M +KG
Sbjct: 384 ISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKG 442
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 124/286 (43%), Gaps = 3/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P A C G V AR +++ + R YN++L + + ++
Sbjct: 132 PLAASVVVDGFCKSGRVDDARALLDEMPR---HGVRLNALCYNSLLDCYVRRKDDARVQE 188
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M + G + TY I++ + G + + ++DEM + D + Y +++
Sbjct: 189 LLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYC 248
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A + + G +P+ + L++G + G ++A + +M +G + +
Sbjct: 249 RAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQI 308
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ MI Y G ++ A + M G +V+TYN++ G C + EA T++ M
Sbjct: 309 IFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIM 368
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G PN++ Y TL+S G + EA + R M KG +V+
Sbjct: 369 IEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVT 414
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 62/137 (45%)
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
S L + ++DG ++G +D + DEM G + +CY ++ Y+ + + Q+L
Sbjct: 131 SPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELL 190
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M G V TY ++ AG + ++ EM+++ + +Y +++ A
Sbjct: 191 EIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRA 250
Query: 269 GKLAEAHEVIRHMVEKG 285
G + A EV V G
Sbjct: 251 GNVRRASEVFDECVGNG 267
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G P T+ LI C G++ AR++ P +YN ++ +
Sbjct: 368 MIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAM---PSVVTYNVMMDGYIK 424
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E ++M +G PD+ TY ++ GK+D +L +EM G P+
Sbjct: 425 KGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVA 484
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
Y L+ L K + A L + M + G P ++ L+ L
Sbjct: 485 YTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +GF A L+ + G + +E F ++ + P +Y A++HAL +
Sbjct: 83 MKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGK 141
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDFHTYN 119
+ + + ++M +G APD +T++ ++ + G +Q R+L+++ + G + D
Sbjct: 142 FDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFET 201
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I+ + K + A +L + GF P+VL F +++G +A +LD+ + M K
Sbjct: 202 IIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEK 261
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC+P+V +T++IT A + +AQ L + M+ G PNV TY+++I G C G+ D+A
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDA 321
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + ME R C PN + +N L+ L A ++ EA ++ M E G
Sbjct: 322 YELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 151/312 (48%), Gaps = 18/312 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TF+ LI C G A +V+E I+ + N ++ I+ L
Sbjct: 152 MVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNS---DAAFETIIQRL-- 206
Query: 58 IRQYKLIEWVYQQMS---DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+Y +E + + +G+ P +L +N+V+ + LD ++LL+ M G P+
Sbjct: 207 CNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPN 266
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+ IL+ L K ++ A LL M G P+V+ ++T+++GL + G +D F
Sbjct: 267 VFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 326
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M + C P+VV + ++I A +E+A+ L+ M G P++ TYNS+I G C +
Sbjct: 327 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 386
Query: 235 KFDEACTMMKEMESRGCN-PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KY 287
+ DEA + + + G + N + Y+TL G++A+A + +V+KG Y
Sbjct: 387 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 446
Query: 288 IHLVSKFKRYKR 299
L+ ++ + R
Sbjct: 447 TSLILEYCKTSR 458
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 139/289 (48%), Gaps = 9/289 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G TF ILI C VG A++++E+ + + P +Y+ +++ L
Sbjct: 258 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV---MGGCSPNVVTYSTVINGLCK 314
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q ++Q M P+++T+NI++ + ++++ +L M +G +PD T
Sbjct: 315 QGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIIT 374
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPS-VLHFTTLMDGLSRAGNL-DACKYFFDE 175
YN L+ L K + A L + E G + + ++TL G + G + DAC+ F
Sbjct: 375 YNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACR-IFSM 433
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +KG PD+ YT +I Y + +L + M +KG P V T ++++ G
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 493
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ A + M +RGC + L+YN +V + A K +A V+ +++K
Sbjct: 494 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK 542
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 120/274 (43%), Gaps = 70/274 (25%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-------------------------- 111
P+ TY I++ G LD +LL+EM SGF
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 112 --------SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR- 162
+PD TY L+H L K K A +L M G P + F+TL+DGL +
Sbjct: 115 FRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKF 174
Query: 163 -----------------AGNLDAC----------KYFFDEMAN--------KGCMPDVVC 187
GN DA KY E+A+ KG P V+
Sbjct: 175 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 234
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++I + A +L+ A L + MI KG +PNVFT+ +I G C A + EA ++++M
Sbjct: 235 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GC+PN + Y+T+++ L G++ +A+E+ + M
Sbjct: 295 MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLM 328
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 5/265 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++ GF T+ LI + A +VVE + F P N+ +A+L L
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 493
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----FHRLLDEMGRSGFSPDFH 116
+ ++ M+ G D L YN+V+ R K D+ +++D+ R F+P
Sbjct: 494 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRK-FNPSSS 552
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ L+ L + K A LL+ M E GF +V + L+ GLSR D F+ M
Sbjct: 553 AVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAM 612
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ G P++ V+I+ +A +++ A +L M G P++ T N++I G+C +G+
Sbjct: 613 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 672
Query: 237 DEACTMMKEMESRGCNPNFLVYNTL 261
D A +++EM G PN ++ L
Sbjct: 673 DLARKLLEEMTEAGLEPNDTTHDLL 697
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 114/248 (45%), Gaps = 3/248 (1%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +Y +++ + + + ++M+ +G+ P + T + V+ + ++
Sbjct: 439 FSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAI 498
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKG---DKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+L D M G + D YN+++ + + DK LA L + ++ F+PS L+
Sbjct: 499 QLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALV 558
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ L + G D K +M+ +G V Y +++ ++A +F+ M++ G
Sbjct: 559 ESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPA 618
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P + T N +I C A K D+A +++ M GC P+ NTL+ +G+ A ++
Sbjct: 619 PEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKL 678
Query: 278 IRHMVEKG 285
+ M E G
Sbjct: 679 LEEMTEAG 686
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 90/174 (51%), Gaps = 2/174 (1%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ TY IL+ A+ LL MK GF+ + + TTLM GL AG +
Sbjct: 55 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F MA K C PDV+ YT ++ + AG+ ++AQ + M+ +G P+ T++++I G C
Sbjct: 115 FRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCK 173
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE-AHEVIRHMVEKG 285
G ++A +++++ RG + + T++ L N E A +V+ ++ KG
Sbjct: 174 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 227
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+A F + MA + CMP+ Y ++I + +AG+L+ A L + M + G N + ++
Sbjct: 40 EALALFRNAMA-RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTL 98
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++G C AG+ EA + M ++ C P+ + Y LV L AGK EA ++R MV +G
Sbjct: 99 MKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQG 156
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A LF + + +PN FTY +IRGF AG D A +++EM+S G N +V+ TL
Sbjct: 39 QEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTL 98
Query: 262 VSNLRNAGKLAEAHEVIRHMVE 283
+ L +AG++ EA E R M +
Sbjct: 99 MKGLCDAGRVVEALEHFRAMAK 120
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 133/255 (52%), Gaps = 3/255 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GEV R + E IK++ P SY+ ++H L+ + ++ +M ++G D+
Sbjct: 566 GEVEKGRALFEE-IKAQ--GLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDV 622
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L YN V+ + GK+D+ ++LL+EM G P TY ++ L K D+ A L
Sbjct: 623 LAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEE 682
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
K +G D +V+ +++L+DG + G +D +E+ KG P+ + ++ + + A E
Sbjct: 683 AKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+++AQ F M PN TY+ MI G CM KF++A +EM+ +G PN + Y T
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTT 802
Query: 261 LVSNLRNAGKLAEAH 275
+++ L AG + EA
Sbjct: 803 MIAGLAKAGNVMEAR 817
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F FRP ++Y ++ AL + + ++ QM + GY ++ + ++ R G++D
Sbjct: 197 FKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDA 256
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
LLDEM + F+ D YN+ + GK K A + MK G P + +TTL+
Sbjct: 257 ALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIG 316
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L +A LD F+E+ +P V Y MI Y +AG+ ++A L + KG +P
Sbjct: 317 VLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIP 376
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V YN ++ GK +EA + EM PN YN L+ L AG+L A +V
Sbjct: 377 SVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA-PNLTTYNILIDMLCKAGELEAALKVQ 435
Query: 279 RHMVEKGKYIHLVS 292
M E G + ++++
Sbjct: 436 DTMKEAGLFPNIMT 449
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M G +PD++ N M ++ G++++ L +E+ G PD +Y+IL+H L
Sbjct: 539 IYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K L MKE G VL + T++DG ++G +D +EM KG P VV
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ L++A LF+ + G NV Y+S+I GF G+ DEA +++E+
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+G PN +N L+ L A ++ EA ++M
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNM 753
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 5/228 (2%)
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ +KL E V + M + P Y ++ A + D L +M G+ +
Sbjct: 179 VKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANV 238
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
H + L+ V + + AAL+LL+ MK F ++ + +D + G +D FF E
Sbjct: 239 HLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHE 298
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +G +PD V YT +I A L++A +LF+ + +P V+ YN+MI G+ AGK
Sbjct: 299 MKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGK 358
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA---HEVIRH 280
FDEA ++++ + +GC P+ + YN +++ L GK+ EA H+ +R
Sbjct: 359 FDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M D P+++ Y ++ ++ G+ + H++ EM G SPD N + +
Sbjct: 504 LYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVF 563
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L +K G P V ++ L+ GL +AG F EM +G DV+
Sbjct: 564 KAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVL 623
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + +G+++KA L + M TKG P V TY S++ G + DEA + +E
Sbjct: 624 AYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 683
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S G + N ++Y++L+ G++ EA+ ++ +++KG
Sbjct: 684 KSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 722
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M N F +N+ I G+VG + F + K P +Y ++ L R+
Sbjct: 264 MKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARR 323
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++++ P + YN ++ GK D+ + LL+ R G P YN
Sbjct: 324 LDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNC 383
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L LG+ K AL + + M++ P++ + L+D L +AG L+A D M G
Sbjct: 384 ILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKVQDTMKEAG 442
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+++ +MI A +L++A +F G+ K P+ T+ S+I G G+ D+A
Sbjct: 443 LFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAY 502
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ ++M PN +VY +L+ N G+ + H++ + MV +G
Sbjct: 503 SLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRG 547
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 141/292 (48%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +N +I C G+V A +++E +K+K +P +Y +++ L
Sbjct: 613 MKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE-MKTK--GLQPTVVTYGSVVDGLAK 669
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ G +++ Y+ ++ ++G++D+ + +L+E+ + G +P+ +T
Sbjct: 670 IDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYT 729
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ A +MK + P+ + ++ +++GL + F+ EM
Sbjct: 730 WNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQ 789
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ + YT MI AG + +A+ LFD G +P+ YN+MI G A K
Sbjct: 790 KQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAM 849
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+A + +E +GC N L+ L A L +A V + E K H
Sbjct: 850 DAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQH 901
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 132/267 (49%), Gaps = 6/267 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NILI C GE+ A KV + ++ LF P + N ++ L ++ ++
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKEAGLF---PNIMTVNIMIDRLCKAQKLDEACSIF 470
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ + +PD T+ ++ R G++D + L ++M S P+ Y L+ K
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + M G P ++ + MD + +AG ++ + F+E+ +G +PDV Y
Sbjct: 531 GRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSY 590
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I + AG + LF M +G +V YN++I GFC +GK D+A +++EM++
Sbjct: 591 SILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKT 650
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+G P + Y ++V L +L EA+
Sbjct: 651 KGLQPTVVTYGSVVDGLAKIDRLDEAY 677
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 148/355 (41%), Gaps = 71/355 (20%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+ LI + + VE F + L P +YN ++ +
Sbjct: 299 MKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGK 358
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ +G P ++ YN ++ R GK+++ R+ DEM R +P+ TYNI
Sbjct: 359 FDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNLTTYNI 417
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH---------------------------- 152
L+ +L K + AAL + + MKE G P+++
Sbjct: 418 LIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKV 477
Query: 153 -------FTTLMDGLSRAGNLDACKYFFD------------------------------- 174
F +L+DGL R G +D ++
Sbjct: 478 CSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGH 537
Query: 175 ----EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
EM ++GC PD++ + AGE+EK + LF+ + +G +P+V +Y+ +I G
Sbjct: 538 KIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGL 597
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG E + EM+ +G + + L YNT++ +GK+ +A++++ M KG
Sbjct: 598 VKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKG 652
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 140/279 (50%), Gaps = 6/279 (2%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A T+N LI C G A V+E + P +Y +L A YK
Sbjct: 166 AYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCL---PDVVTYTILLEATCKRSGYKQAMK 222
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ +M D+G APDI+TYN+V+ + G+++ L + G P+ +YNI+L L
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
++ A L+ M G P+V+ F L+ L R G ++ ++M GC P+ +
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ ++ ++ KA + + M+++G P++ +YN+++ C G+ D A ++ ++
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQL 402
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +GC+P + YNT++ L AGK EA E++ M KG
Sbjct: 403 KDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKG 441
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 136/274 (49%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N+++ + G +E + P SYN +L L +++ E + ++M
Sbjct: 238 TYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEM 297
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +G P+++T+N+++ R G ++ +L++M + G +P+ +YN LLH K K
Sbjct: 298 AHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKI 357
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ + M G P ++ + TL+ L R G +D ++ +KGC P ++ Y +
Sbjct: 358 HKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTV 417
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I AG+ ++A +L D M +KG P++ TY+++ G C + +EA +++ G
Sbjct: 418 IDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGI 477
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P +YN ++ L + A ++ +M+ G
Sbjct: 478 RPTAALYNAILLGLCKRRETHNAIDLFAYMISSG 511
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 128/276 (46%), Gaps = 11/276 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G AR+V L P YNA++ G Q ++ + ++D
Sbjct: 114 LCASGRTADARRV--------LAASGPDVMVYNAMVAGYCGAGQ---LDAARRLVADMPV 162
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD TYN ++ G+ +L++M R G PD TY ILL K A+
Sbjct: 163 EPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMK 222
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL+ M + G P ++ + +++G+ + G ++ F + + GC P+ V Y +++
Sbjct: 223 LLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLF 282
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A E A+ L + M KG PNV T+N +I C G + A ++++M GC PN L
Sbjct: 283 TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSL 342
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L+ K+ +A E + MV +G Y +VS
Sbjct: 343 SYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVS 378
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 111/251 (44%), Gaps = 37/251 (14%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G P TFN+LI GL +E + + P SYN +LHA ++
Sbjct: 297 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKK 356
Query: 61 -YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+K +E+V + M G PDI++YN ++ A R G++D LL ++ G SP +YN
Sbjct: 357 IHKAMEFV-ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYN 415
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA-----CKY--- 171
++ L K K AL LL+ M G P ++ ++T+ GL R ++ CK
Sbjct: 416 TVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDM 475
Query: 172 ---------------------------FFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
F M + GCMP+ YT+++ G +++A
Sbjct: 476 GIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEA 535
Query: 205 QDLFDGMITKG 215
++LF + ++G
Sbjct: 536 RELFAQLCSRG 546
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 150/323 (46%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G A + LI G + LA + +E+ K+ N P YN+++ L
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKA---NVHPDLFCYNSLIKGLST 535
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + E Y Q+ G PD TY+ ++ + G L++ +LL +M SG P+ T
Sbjct: 536 VGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADT 595
Query: 118 Y-----------------NILLHVLGKGDKP------------------LAALNLLNHMK 142
Y +IL +LG GDKP A +L ++
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVE 655
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G P + +++L+ GL + +++ DEMA +G P +VCY +I + +G++
Sbjct: 656 KNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDIS 715
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+++FD ++ KG +PN TY ++I G C G +A + KEM RG P+ VYN L
Sbjct: 716 RARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLA 775
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ +A L +A + M +G
Sbjct: 776 TGCSDAADLEQALFLTEEMFNRG 798
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 133/311 (42%), Gaps = 37/311 (11%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G + A +++ + + S L +P ++Y +L Y+ + + Q M G
Sbjct: 569 CKTGNLEKADQLLRQMLNSGL---KPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDK 625
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD Y IV+ R ++ +L E+ ++G PD H Y+ L+ L K A+ L
Sbjct: 626 PDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGL 685
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M + G +P ++ + L+DG R+G++ + FD + KG +P+ V YT +I
Sbjct: 686 LDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCK 745
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYN--------------------------------- 224
G++ A DL+ M+ +G P+ F YN
Sbjct: 746 NGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLF 805
Query: 225 -SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++ GFC GK E ++ M R PN +VS AGKL EAH V + +
Sbjct: 806 NTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQ 865
Query: 284 KGKYIHLVSKF 294
K +F
Sbjct: 866 KKASQSATDRF 876
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V A E + + P +Y A+++ L + K + +
Sbjct: 280 TYNVMISGLCRSGAVEEAFGFKEEMVD---YGLSPDAFTYGALMNGLCKGSRLKEAKALL 336
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+MS G P+I+ Y ++ + GK + +L EM +G P+ Y+ L+ L K
Sbjct: 337 DEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKI 396
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LL M +VG P + LM G + + D +EM N G +P+V Y
Sbjct: 397 GQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSY 456
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+MI GE ++A +L + MI++G PN F Y +I G G AC +++M
Sbjct: 457 GIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTK 516
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ YN+L+ L G++ EA E + ++G
Sbjct: 517 ANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG 553
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ A +++ I + + +P K Y+ ++ L I Q + ++M G PD
Sbjct: 362 GKTAEAFDILKEMISAGV---QPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT 418
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
TYN +M ++ D LL+EM SG P+ ++Y I+++ L + + A NLL
Sbjct: 419 FTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEE 478
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P+ + L+ G S+ GN+ ++M PD+ CY +I G
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+E+A++ + + +G +P+ FTY+ +I G+C G ++A ++++M + G PN Y
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ + + +++ M+ G
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSG 623
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 1/279 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P+TA ++L+ T + G R + + P + N +L LL +L+
Sbjct: 171 PSTA-VLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ M G PD+ TY+ + A + D ++ +EM R + + TYN+++ L
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A M + G P + LM+GL + L K DEM+ G P++V
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ ++ G+ +A D+ MI+ G PN Y+++IRG C G+ A ++KEM
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ YN L+ A E++ M G
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSG 448
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 115/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ + A R + + V+++M A + +TYN+++ R G +++ +EM
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SPD TY L++ L KG + A LL+ M G P+++ + TL+DG + G
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKT 364
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
EM + G P+ + Y +I G+L +A L MI G P+ FTYN +
Sbjct: 365 AEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPL 424
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++G D A ++ EM + G PN Y +++ L G+ EA ++ M+ +G
Sbjct: 425 MQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG 483
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P ++++ + G + +++ M G +P N LL L + D
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M+ G P V ++T ++ +A + DA K F+EM + C + V Y VMI+
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+G +E+A + M+ G P+ FTY +++ G C + EA ++ EM G PN +
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
VY TLV GK AEA ++++ M+ G
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAG 378
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 130/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++ LI C G++G A K+++ IK L RP +YN ++
Sbjct: 374 MISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGL---RPDTFTYNPLMQGHFQ 430
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M + G P++ +Y I++ + G+ + LL+EM G P+
Sbjct: 431 QHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFM 490
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A L M + P + + +L+ GLS G ++ + ++ ++
Sbjct: 491 YAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQ 550
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +PD Y+ +I Y G LEKA L M+ G PN TY ++ G+ + ++
Sbjct: 551 KRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYE 610
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++++ M G P+ +Y ++ NL + + A V+ + + G
Sbjct: 611 KVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNG 658
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 6/239 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N++L AL R + + + ++ + PD++TYN + R+ + +L M
Sbjct: 168 FNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMV 226
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-----PSVLHFTTLMDGLSR 162
SG +P TYNI+L + + A + MK+ G P V+ +TT++ GL
Sbjct: 227 ESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGV 286
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG L+ + FDEMA +GC P V Y +I G +E A +FDGM+ KG +PNV T
Sbjct: 287 AGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVT 346
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y +IRG C AGK D +++ M++ GC P YN L+ L G++ + ++ M
Sbjct: 347 YTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKM 405
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK R L++ F+PD TYN L + AL++L M E G P+ +
Sbjct: 182 GKAASLVRALEQR----FTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTY 237
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG-----CMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ G RAG L FF +M +G C PDVV YT M+ AG+LEKA+ +F
Sbjct: 238 NIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVF 297
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
D M +G P+V TYN++I+ C G ++A T+ M +G PN + Y L+ L +A
Sbjct: 298 DEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHA 357
Query: 269 GKLAEAHEVIRHMVEKG 285
GK+ +++ M G
Sbjct: 358 GKIDRGLKLLERMKNGG 374
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 9/256 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-----SKLFNFRPFKNSYNAILHAL 55
M+E+G T T+NI++ G R + F++ SK + +P SY ++H L
Sbjct: 225 MVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGL 284
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Q + V+ +M+ EG AP + TYN ++ + G ++ + D M G+ P+
Sbjct: 285 GVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNV 344
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY +L+ L K L LL MK G +P V + L+ L G ++ F++
Sbjct: 345 VTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEK 404
Query: 176 MAN-KGCMPDVVCYTVMITSYI---AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
M+ + C+P+ Y ++I++ A ++ A + D M+ +G LP F +N ++ G
Sbjct: 405 MSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDEMVDRGYLPRRFMFNRVLNGLM 464
Query: 232 MAGKFDEACTMMKEME 247
+ G + + +++ E
Sbjct: 465 LTGNQELSRKLLRMQE 480
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 6/184 (3%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +N LL L K A +L+ + E F P V+ + TL DG R +
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDTSRALDVL 222
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-----PNVFTYNSMIR 228
M G P Y +++ + AG+L A D F M +G P+V +Y +M+
Sbjct: 223 RLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVH 282
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
G +AG+ ++A + EM GC P+ YN L+ + G + +A V M+ KG
Sbjct: 283 GLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVP 342
Query: 289 HLVS 292
++V+
Sbjct: 343 NVVT 346
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 134/281 (47%), Gaps = 4/281 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF FN+L+ ++G+ + + F K F P S N +LH L + L
Sbjct: 180 GFGVFDTLFNVLV----DLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ M G +P + TYN+V+ R G L+ L +EM G PD TYN L+
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK A+++ MK+ G +P V+ + +L++ + + + M +G P+
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ +I ++ AG L +A F MI G PN FTY S+I C G +EA +
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ G N N + Y L+ L G++ EA E+ +++ G
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 129/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + T+N++I G F + K RP +YN+++ +
Sbjct: 242 MVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGM 301
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V+++M D G PD++TYN ++ + ++ Q L M + G P+ TY+
Sbjct: 302 LTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYST 361
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K L A M VG P+ +T+L+D + G+L+ EM G
Sbjct: 362 LIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAG 421
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
++V YT ++ G + +A++LF ++ G N Y S+ G+ A ++A
Sbjct: 422 VNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAM 481
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM + P+ L+Y T + L ++ ++ VIR M++ G
Sbjct: 482 DILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N LI G+VG+ V F + K P +YN++++ +
Sbjct: 277 MKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFER 336
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
M G P+++TY+ ++ A + G L + ++ +M R G P+ TY
Sbjct: 337 IPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTS 396
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K A L + M++ G + +++ +T L+DGL G + + F + G
Sbjct: 397 LIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAG 456
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ YT + YI A +EKA D+ + M K P++ Y + I G C + +++
Sbjct: 457 WTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSM 516
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++EM G N +Y TL+ GK EA +++ M + G I +V+
Sbjct: 517 AVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVT 568
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 120/254 (47%), Gaps = 6/254 (2%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP ++ + + L+ + + + +M+ P + + N ++ +RL K +
Sbjct: 178 RPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELL---HRLSKSSKGGL 234
Query: 102 LLD---EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L +M +G SP TYN+++ L + AA +L MK G P ++ + +L+D
Sbjct: 235 ALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLID 294
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G + G L F+EM + GC PDV+ Y +I + + +A + GM +G P
Sbjct: 295 GYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQP 354
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV TY+++I FC AG EA +M G PN Y +L+ G L EA ++
Sbjct: 355 NVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLE 414
Query: 279 RHMVEKGKYIHLVS 292
M + G +++V+
Sbjct: 415 SEMQQAGVNLNIVT 428
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+ L+ E G R+ E F + + Y ++ H + +
Sbjct: 417 MQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKM 476
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M+ + PD+L Y + R +++ ++ EM G + + + Y
Sbjct: 477 MEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTT 536
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K K A+NLL M+++G +V+ + L+DGL + G + +FD M G
Sbjct: 537 LIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNG 596
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+++ YT +I LE+A++LF+ M+ KG P+ Y S+I G G EA
Sbjct: 597 LQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEAL 656
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ M G + Y +L+ G++ A ++ M+ KG
Sbjct: 657 SLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG 701
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++M D G + Y ++ A +++GK + LL EM G TY +L+ L
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ +HM G P+++ +T L+DGL + L+ K F+EM +KG PD +
Sbjct: 578 KIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKL 637
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I + G +A L + M+ G ++ Y S+I GF G+ A +++ EM
Sbjct: 638 VYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEM 697
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ ++ L+ G + EA + M +G
Sbjct: 698 LRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 12/306 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+ LI C G++ A K+ E ++ N +Y A+L L
Sbjct: 382 MIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL-ESEMQQAGVNLNIV--TYTALLDGLCE 438
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E ++ + G+ + Y + + +++ +L+EM + PD
Sbjct: 439 DGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLL 498
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y + L + ++ ++ ++ M + G + +TTL+D + G EM
Sbjct: 499 YGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQ 558
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G VV Y V+I G +++A FD M G PN+ Y ++I G C +
Sbjct: 559 DLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLE 618
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
EA + EM +G +P+ LVY +L+ G EA + MVE G Y L+
Sbjct: 619 EAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLI 678
Query: 292 SKFKRY 297
F RY
Sbjct: 679 WGFSRY 684
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 118/285 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T++ LI + G+ + + F+ +P + +Y +++ A I
Sbjct: 347 MKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGD 406
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M G +I+TY ++ G++ + L + ++G++ + Y
Sbjct: 407 LNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTS 466
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L H K A+++L M + P +L + T + GL R ++ EM + G
Sbjct: 467 LFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG 526
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ YT +I +Y G+ +A +L M G V TY +I G C G +A
Sbjct: 527 LTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAV 586
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M G PN ++Y L+ L L EA + M++KG
Sbjct: 587 RYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKG 631
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 95/215 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G + + LI +VG + V + + + +Y ++ L I
Sbjct: 522 MMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGL 581
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M+ G P+I+ Y ++ + L++ L +EM G SPD Y
Sbjct: 582 VQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTS 641
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K P AL+L N M E+G + + +T+L+ G SR G + K DEM KG
Sbjct: 642 LIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKG 701
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+PD V ++ Y G++ +A L D M +G
Sbjct: 702 IIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 84/225 (37%), Gaps = 24/225 (10%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG-RSGFSPDFHTYNILLHVLGKG 128
+SD AP ++ +V G + E G R+GF +Y +L H+L G
Sbjct: 86 HLSDSALAPIWVSKALVKLK----GDPKSALKFFKEAGARAGFRHAAESYCVLAHILFCG 141
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVC 187
L A +++ +G + C +F + + C P
Sbjct: 142 MFYLDARSVIKEWILLGRE------------------FPGCDFFDMLWSTRNVCRPGFGV 183
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ + + G LE+A+ F M LP V + N ++ + K A + K+M
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G +P+ YN ++ L G L A + M KG +V+
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVT 288
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ LI C G+ A ++ + I+ K+F P Y ++ L G
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF---PTVVIYTILIRGLCG 240
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E +++ M + G P++ TYN +M ++ + + L EM G P+ T
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ IL+ L K D+ ++A L M G P++ + L+DG +AGNL E+
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+PDV Y+++I +E+A L M KG LPN TYN++I G+C G +
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + +M +G PN + ++TL+ AGK+ A + MV KG
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 138/297 (46%), Gaps = 19/297 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G TF ILI C E+ ARK + I F P YN ++
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFL---IDMASFGVVPNIFVYNCLIDGYCK 345
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ PD+ TY+I++ + ++++ LL EM + GF P+ T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K A+ + + M E G +P+++ F+TL+DG +AG ++A + EM
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG +PDVV YT +I + G ++A L M G PNVFT + +I G C G+
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525
Query: 238 EACTMM-------------KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+A + E++ C+PN ++Y L+ L G++ +A + M
Sbjct: 526 DAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDM 582
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 3/277 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T F +LI E+GL + + + K + P + N +L L+ ++ + VY
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVY 181
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M G +P+++TY ++ R G + RL DEM P Y IL+ L
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A ++ M+ G P++ + T+MDG + ++ + EM G +P+VV +
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I E+ A+ M + G +PN+F YN +I G+C AG EA ++ E+E
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y+ L+ L ++ EA +++ M +KG
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 13/247 (5%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +YN ++ + V QM+++G P+I+T++ ++ + GK++
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L EM G PD Y L+ K A L M+E G P+V + L+DGL
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Query: 161 SRAGNL-DACKYFF------------DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
+ G + DA K F +E+ C P+ V YT +I G + KA
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F M G P+VFT +I+G A + + ++ G PN VY L
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638
Query: 268 AGKLAEA 274
+G L A
Sbjct: 639 SGYLKSA 645
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P++ ++DGL + G D + +M +G P+VV Y +I G+ KA L
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
FD MI K P V Y +IRG C + EA +M + M + G PN YNT++
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +A E+ + M+ G ++V+
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVT 300
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 109/272 (40%), Gaps = 31/272 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSY--NAI 51
M + GF A T+N LI C G + + ++ E+ I+ + F + Y
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 52 LHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+ A +G+ Y +M +G PD++ Y ++ ++ G + RL EM +G
Sbjct: 454 MEAAMGL---------YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLL-------------NHMKEVGFDPSVLHFTTLMD 158
P+ T + L+ L K + A+ L N + P+ + +T L+
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL G + FF +M G PDV V+I + A L L ++ G +P
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
N Y + +G+ +G A +++ G
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALRCSEDLSGIG 656
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 121/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ A ++ +M D G PD++TY V+ A R+GK+D ++M
Sbjct: 399 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 458
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +PD + YN L+ L A L++ + G ++ F+++++ L + G +
Sbjct: 459 IDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 518
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FD N G PD V Y +++ Y G++EKA +FD M++ G PNV Y ++
Sbjct: 519 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 578
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C G+ DE ++ +EM RG P+ ++Y+ ++ L AG+ A M E G
Sbjct: 579 VNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESG 637
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G PD++TYN V+ A + +D+ L +M P+ TYN L++
Sbjct: 244 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 303
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ + M+ P V+ + LM L + G + + FD MA KG PDV
Sbjct: 304 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 363
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +M+ Y G L DLFD M+ G P+ +T+N +I+ + G D+A + EM
Sbjct: 364 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y T+++ L GK+ +A E M+++G
Sbjct: 424 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 462
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L +++V+R I L +YN+++HAL R E +QM ++ P+ TYN
Sbjct: 244 LFKEMVQRGIPPDLV-------TYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYN 296
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ G+ + R+ EM R PD T ++L+ L K K A ++ + M
Sbjct: 297 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMK 356
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G +P V + +++G + G L FD M G PD + V+I +Y G L+KA
Sbjct: 357 GQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKA 416
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+F+ M G P+V TY ++I C GK D+A +M +G P+ YN L+
Sbjct: 417 MIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQG 476
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G L +A E+I ++ G ++ +V
Sbjct: 477 FCTHGSLLKAKELISEIMNNGMHLDIV 503
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 136/309 (44%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI G ++ V F + + + P + + ++ +L + K V+ M
Sbjct: 294 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 353
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +G PD+ +YNI++ G L L D M G +PDF+T+N+L+
Sbjct: 354 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 413
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ + N M++ G P V+ + T++ L R G +D F++M ++G PD Y +
Sbjct: 414 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473
Query: 192 ITSYIAAGELEK-----------------------------------AQDLFDGMITKGQ 216
I + G L K AQ++FD + G
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 533
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ YN ++ G+C+ GK ++A + M S G PN + Y TLV+ G++ E
Sbjct: 534 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 593
Query: 277 VIRHMVEKG 285
+ R M+++G
Sbjct: 594 LFREMLQRG 602
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGKLDQFHRLLD 104
SY+ +L +L + + + + M++ G +P+++ YN V+ ++ G +++ L
Sbjct: 187 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 246
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM + G PD TYN ++H L K A L M P+ + L+ G S G
Sbjct: 247 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 306
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F EM +PDVV ++++ S G++++A+D+FD M KGQ P+VF+YN
Sbjct: 307 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 366
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M+ G+ G + + M G P+F +N L+ N G L +A + M +
Sbjct: 367 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 426
Query: 285 G 285
G
Sbjct: 427 G 427
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 4 NGF-PTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
NGF AR + C G V L + R ++ + P ++Y ++
Sbjct: 71 NGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLS--PTSHTYAILMDCCTRAH 128
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-FHRLLDEMGRSGFSPDFHTY 118
+ +L + Q+ G +I+ N ++ + D+ LL G PD +Y
Sbjct: 129 RPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSY 188
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ILL L K A +LL M E G P+V+ + T++DG + G+++ F EM
Sbjct: 189 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEM 248
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD+V Y ++ + A ++KA+ M+ K LPN +TYN++I G+ G++
Sbjct: 249 VQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQW 308
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + KEM P+ + + L+ +L GK+ EA +V M KG+
Sbjct: 309 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 358
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TFN+LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 388 MLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 447
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G APD YN ++ G L + L+ E+ +G D ++
Sbjct: 448 MDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 507
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P + + LMDG G ++ FD M + G
Sbjct: 508 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 567
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y G +++ LF M+ +G P+ Y+ +I G AG+ A
Sbjct: 568 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAK 627
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G + YN ++ L
Sbjct: 628 MKFHEMTESGIAMDICTYNIVLRGL 652
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 130/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G +N LI CT G + A++++ + + + F +++I++ L
Sbjct: 458 MIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF---FSSIINNLCK 514
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ + G PD + YN++M +GK+++ R+ D M +G P+
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ K + L+L M + G PS + ++ ++DGL AG K F EM
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMT 634
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G D+ Y +++ ++A LF + N+ T N+MI G + +
Sbjct: 635 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 694
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + P+ + Y+ +++NL G + EA ++ M G
Sbjct: 695 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 6/272 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A +N+L+ C G++ A +V + + + + P Y +++ I +
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI---EPNVVGYGTLVNGYCKIGRI 588
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M G P + Y+I++ + G+ EM SG + D TYNI+
Sbjct: 589 DEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIV 648
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L K A+ L ++ + +++ T++DG+ + ++ K F ++
Sbjct: 649 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRL 708
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P VV Y++MIT+ I G +E+A+D+F M G PN N ++R + A
Sbjct: 709 VPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA 768
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ +++ R + L LV + G E
Sbjct: 769 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 800
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 13/169 (7%)
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-------FFDEMANKGCM 182
+P A +LL+ ++ G + L+RA + AC+ F+ A++
Sbjct: 47 RPEEAHDLLDELQRRGTPVLERDLNGFLAALARAPSSAACRSGPALAVALFNRAASRAQG 106
Query: 183 PDVVC-----YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P V+ Y +++ A E A F ++ G N+ N ++ GFC A + D
Sbjct: 107 PRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTD 166
Query: 238 EAC-TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ GC P+ Y+ L+ +L + GK +A +++R M E G
Sbjct: 167 EALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 215
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 142/287 (49%), Gaps = 8/287 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-PD 79
G + K + F + K +P +YN+++ L+ QY+ + +Y +MS EG+ PD
Sbjct: 170 GNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPD 229
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+TY+ ++ A +LG+ D +LL+EM +G P Y +L+ + K + AL+L
Sbjct: 230 TMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFE 289
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M+ P V +T L+ GL +AG +D +FF EM +GC PD + MI AG
Sbjct: 290 EMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAG 349
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKEMESRGCNPNFLVY 258
L+ A LF M T +P+V TYN++I+ F + E + + M+ G +P+ Y
Sbjct: 350 RLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTY 409
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ L+ ++ +A ++ M EKG Y L+ + KR
Sbjct: 410 SILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 456
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 104/207 (50%), Gaps = 3/207 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRL-GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++Q+M P ++TYN ++ A + + + + M SG SP TY+IL+
Sbjct: 357 LFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGF 416
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPD 184
K ++ A+ LL M E GF P + +L+D L +A D AC+ F + N G
Sbjct: 417 CKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSS 476
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y VMI AG L+ A ++FD M G P+V+ YN+++ G G DEA + M+
Sbjct: 477 RV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMR 535
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKL 271
M+ GC P+ YN +++ L+ L
Sbjct: 536 RMQEHGCIPDINSYNIILNGLQKQEDL 562
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +NG T + + +L+ ++ + F + + RP +Y ++ L +
Sbjct: 256 MKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGR 315
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M EG PD + N ++ + G+LD +L EMG P TYN
Sbjct: 316 IDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNT 375
Query: 121 LLHVLGKGDKPLAAL-NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L + + + + MKE G PS ++ L+DG + ++ +EM K
Sbjct: 376 IIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK 435
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P Y +I + A + A +LF + + Y MI+ AG+ D+A
Sbjct: 436 GFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDA 495
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M EM GC P+ YN L+S L G L EA +R M E G
Sbjct: 496 INMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHG 541
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 36 SKLFNFRPFKNSYNAILHALLGIRQY----KLIE-------------------------- 65
+K N+ ++Y A++H L + QY K+I+
Sbjct: 114 AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAK 173
Query: 66 ------WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS-PDFHTY 118
++ Q+ P YN ++ G+ ++ H L +EM G PD TY
Sbjct: 174 MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTY 233
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L+ K + +A+ LLN MK+ G P+ +T L+ + ++ F+EM +
Sbjct: 234 SALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRH 293
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ C PDV YT +I AG +++A F M +G P+ N+MI AG+ D+
Sbjct: 294 QYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDD 353
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKG 285
A + +EM + C P+ + YNT++ L + + +E M E G
Sbjct: 354 AMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESG 401
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEWVYQ 69
N +I G+ G ++ F + P +YN I+ AL R ++ W ++
Sbjct: 337 VMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSW-FE 395
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M + G +P TY+I++ + ++++ LL+EM GF P Y L+ LGK
Sbjct: 396 RMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAK 455
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A L +KE S + ++ L +AG LD FDEM GC PDV Y
Sbjct: 456 RYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYN 515
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+++ G L++A M G +P++ +YN ++ G
Sbjct: 516 ALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGL 556
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 83/169 (49%), Gaps = 6/169 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G ++ T++ILI C + A ++E + F P +Y +++ AL
Sbjct: 397 MKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEK---GFPPCPAAYCSLIDALGK 453
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++Y L ++Q++ + + Y +++ + G+LD + DEM + G +PD +
Sbjct: 454 AKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYA 513
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
YN L+ L + AL+ + M+E G P + + +++GL + +L
Sbjct: 514 YNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDL 562
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 156/327 (47%), Gaps = 35/327 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG T+N ++ ++ + K + P +YN+++ L +
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G PDI TY ++ G L + H LLD M R+G PD H +NI
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K +K A+ + + M++ G +P+V+ + ++ L ++G++D +F++M ++G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQD---------------------------------- 206
P+++ YT +I S + +KA++
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496
Query: 207 -LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G PNV TY+++I G+C+AGK DEA ++ M S G P+ + YNTL++
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ +A + + MV G ++++
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIIT 583
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +M D +PD++TY+ ++ A + +D+ +L M ++G P+ TYN +LH
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
++P A+ L M+ G +P V+ + +LMD L + G + FD M +G PD+
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ Y G L + L D M+ G P+ +N +I + K DEA + +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G NPN + Y ++ L +G + +A M+++G
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 2/234 (0%)
Query: 59 RQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+Q K+ E V+ +M G P+++TY V+ + G +D ++M G +P+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y L+H L DK A L+ M + G + + F +++ + G + + FD M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P+V+ Y+ +I Y AG++++A L M + G P+ TYN++I G+C +
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
D+A + KEM S G +PN + YN ++ L + + A A E+ + + G + L
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNILIC + + + F K + P +Y A++ L
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++QM DEG P+I+ Y ++ + K D+ L+ EM G + +N
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H K + + + L + M +G P+V+ ++TL+DG AG +D M + G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V Y +I Y ++ A LF M++ G PN+ TYN +++G + A
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
+ + G YN ++ L
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGL 626
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-- 144
+CA R D +L M PD + ILL L ++ AL LL+ M +
Sbjct: 132 LCADKRTS--DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG 189
Query: 145 -GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P V+ +TT+++G + G+ D + EM ++ PDVV Y+ +I + ++K
Sbjct: 190 GGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK 249
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A ++ M+ G +PN TYNS++ G+C + + EA +K+M S G P+ + YN+L+
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRG 331
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 12/285 (4%)
Query: 9 TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG-IRQYKLI 64
T T+ ILI C G + L + +K FR ++ +L L R +
Sbjct: 86 TVHTYGILIGCCCRAGRLDLGFAALGNVVKK---GFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 65 EWVYQQMSDEGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V ++M++ PD+ + I++ C + R + L+ H + D+ G G +PD +Y
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG-GGSAPDVVSYTT 201
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K A + + M + P V+ +++++ L + +D M G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MP+ + Y ++ Y ++ + ++A M + G P+V TYNS++ C G+ EA
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M RG P+ Y TL+ G L E H ++ MV G
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 129/313 (41%), Gaps = 17/313 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR---IGVKPNVITYSTLIDGYCL 523
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +TYN ++ R+ ++D L EM SG SP+ T
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + AA L + + G + + ++ GL + D F +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +PN +TY M G +
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK---------GKYI 288
E + ME GC + + N +V L G++ A + + EK +I
Sbjct: 704 ELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 763
Query: 289 HLVS--KFKRYKR 299
L+S K++ Y R
Sbjct: 764 DLLSGGKYQEYHR 776
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 134/272 (49%), Gaps = 13/272 (4%)
Query: 27 RKVVERFIKSKLFN-----FRPFKNS--------YNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E +K K F ++ S +N ++H R ++ + V+ ++
Sbjct: 93 RKVLEHLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITK 152
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P +++YN +M RLG LD+ RL M SG PD +TY++L++ L K K
Sbjct: 153 WGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDD 212
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M G P+ + FTTL+DG + G +D + +M ++ +PD++ Y +I
Sbjct: 213 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIY 272
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L++A DL D M KG P+ TY ++I G C G D A K M
Sbjct: 273 GLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRL 332
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + Y L+S L G+ +A +++R M+ G
Sbjct: 333 DDVAYTALISGLCQEGRSVDAEKMLREMLSVG 364
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 133/283 (46%), Gaps = 6/283 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E+G+P + FNIL+ C ++ +A+ V + K + RP SYN +++ +
Sbjct: 115 ILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 171
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 172 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 231
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + AL + M P ++ + TL+ GL + G+L DEM+
Sbjct: 232 FTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 291
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 292 MKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 351
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+A M++EM S G P+ Y +++ G + + ++++
Sbjct: 352 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G+ S+ F LM + ++ + FD + G P VV Y ++ YI G+L+
Sbjct: 117 ESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M G P+V+TY+ +I G C K D+A + EM +G PN + + TL+
Sbjct: 177 EGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 236
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ A E+ + M+ + L++
Sbjct: 237 DGHCKNGRVDLALEIYKQMLSQSLLPDLIT 266
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 145/300 (48%), Gaps = 8/300 (2%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T + +I G + K V F + K +P ++YN+++ L+ +Y+ + +
Sbjct: 153 VTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHEL 212
Query: 68 YQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +MS+EG PD +TY+ ++ A +LG+ D LL+EM +G P Y +L+ +L
Sbjct: 213 YNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLF 272
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K D AL L M+ P V +T L+ GL +AG LD FF EM +GC PD V
Sbjct: 273 KLDNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTV 332
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKE 245
MI AG L+ A LF+ M T +P+V TYN++I+ F + E + +
Sbjct: 333 LMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFER 392
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
M+ G +P+ Y+ L+ + +A ++ M EKG Y L+ + KR
Sbjct: 393 MKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 452
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRL-GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++++M P ++TYN ++ A + ++ + + M SG SP TY+IL+
Sbjct: 353 LFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGF 412
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ++ A+ LL M E GF P + +L+D L +A D F E+
Sbjct: 413 CKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSA 472
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y VMI AG L+ A DLFD M G PNV+ YN+++ G AG DEA T M+
Sbjct: 473 RVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRR 532
Query: 246 MESRGCNPNFLVYNTLVSNLRNAG 269
M+ GC P+ YN +++ L G
Sbjct: 533 MQDHGCIPDINSYNIILNALAKTG 556
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 126/271 (46%), Gaps = 3/271 (1%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEWVYQQ 70
N +I G+ G ++ F + + P +YN I+ AL R ++ W +++
Sbjct: 334 MNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSW-FER 392
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G +P TY+I++ + + ++ LL+EM GF P Y L+ LGK +
Sbjct: 393 MKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 452
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L +KE S + ++ L +AG LD FDEM GC P+V Y
Sbjct: 453 YDLANELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNA 512
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+++ AG L++A M G +P++ +YN ++ G D A M+ M+
Sbjct: 513 LMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSA 572
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + YNT++ L +AG EA ++++ M
Sbjct: 573 IKPDAVSYNTVLGALSHAGMFEEAAKLMKEM 603
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 129/319 (40%), Gaps = 43/319 (13%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP T T++ LI ++G + + K +P Y ++ L +
Sbjct: 223 FPDTV-TYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGAL 281
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++++M + PD+ TY ++ + G+LD+ + EM R G PD N +++ L
Sbjct: 282 GLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFL 341
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL----SRAGNLDACKYFFDEMANKGC 181
GK + A+ L M+ + PSV+ + T++ L SR + + +F+ M G
Sbjct: 342 GKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISS---WFERMKGSGI 398
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP----------------------- 218
P Y+++I + EKA L + M KG P
Sbjct: 399 SPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANE 458
Query: 219 ------------NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+ Y MI+ AG+ D+A + EM GC PN YN L+S L
Sbjct: 459 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLA 518
Query: 267 NAGKLAEAHEVIRHMVEKG 285
AG L EA +R M + G
Sbjct: 519 RAGMLDEALTTMRRMQDHG 537
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G+ G V+ F + P +YNA++ L
Sbjct: 465 ENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLD 524
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++M D G PDI +YNI++ A + G D+ +L M +S PD +YN +L
Sbjct: 525 EALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVL 584
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L A L+ M +GFD ++ ++++++ + +
Sbjct: 585 GALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGK 624
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N L+ G+ + + + + P NSYN IL+AL + M
Sbjct: 509 AYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNM 568
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
PD ++YN V+ A G ++ +L+ EM GF D TY+ +L +GK D+
Sbjct: 569 KQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVDQ 627
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 3/257 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
AR + E+F K +P +YN ++ LL ++ + V+ Q+ + G PD+ TYN
Sbjct: 770 ARMLFEKFTKD--LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNF 827
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL-NHMKEV 144
++ A + GK+D+ + EM P+ T+NI++ L K AL+L + M +
Sbjct: 828 LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDR 887
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
F P+ + L+DGLS++G L K F+ M++ GC P+ Y ++I + AGE + A
Sbjct: 888 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAA 947
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
LF M+ +G P++ TY+ ++ CM G+ DE +E++ G NP+ + YN +++
Sbjct: 948 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIING 1007
Query: 265 LRNAGKLAEAHEVIRHM 281
L +L EA + M
Sbjct: 1008 LGKFHRLEEALVLFNEM 1024
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 136/292 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E GF A ++N LI + + +E + + L FRP +Y++++ L R
Sbjct: 181 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRD 240
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + ++M G P++ T+ I + R GK+++ + +L M G PD TY +
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 300
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A + MK P + + TL+D S +LD+ F+ EM G
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDG 360
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PDVV +T+++ + AG +A D M +G LPN+ TYN++I G + D+A
Sbjct: 361 HVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 420
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ MES G P Y + +G A E M KG ++V+
Sbjct: 421 EIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 472
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 140/278 (50%), Gaps = 1/278 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA T+ + I G+ G + +E F K K P + NA L++L + +
Sbjct: 430 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 489
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ + D G PD +TYN++M ++G++D+ +LL EM + PD N L++
Sbjct: 490 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINT 549
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K D+ A + MKE+ P+V+ + TL+ GL + G + F+ M KGC P+
Sbjct: 550 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 609
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ + + E+ A + M+ G +P+VFTYN++I G G+ EA
Sbjct: 610 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 669
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+M+ + P+F+ TL+ + AG + +A+++I + +
Sbjct: 670 QMK-KLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFL 706
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 118/251 (47%)
Query: 35 KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
K + F F SYN ++H LL R VY++M +G+ P + TY+ +M +
Sbjct: 180 KMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRR 239
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
++ LL EM G P+ +T+ I + VLG+ K A +L M + G P V+ +T
Sbjct: 240 DIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYT 299
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L+D L A LD K F +M PD V Y ++ + +L+ + M
Sbjct: 300 VLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD 359
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +P+V T+ ++ C AG F EA + M +G PN YNTL+ L +L +A
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 419
Query: 275 HEVIRHMVEKG 285
E+ +M G
Sbjct: 420 LEIFDNMESLG 430
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 135/276 (48%), Gaps = 2/276 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK-LIEWVYQQ 70
T+N L+ G+ G ++ E + + P ++N ++ L+ ++ Y
Sbjct: 824 TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
MSD ++P TY ++ + G+L + +L + M G P+ YNIL++ GK +
Sbjct: 884 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA L M + G P + ++ L+D L G +D ++F E+ G PDVVCY +
Sbjct: 944 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNL 1003
Query: 191 MITSYIAAGELEKAQDLFDGMI-TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I LE+A LF+ M ++G P+++TYNS+I +AG +EA + E++
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G PN +N L+ +GK A+ V + MV G
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGG 1099
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D+G P++ TYN ++C R+ +LD + D M G P +TY + + GK
Sbjct: 391 MRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGD 450
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
++AL MK G P+++ + L++AG K F + + G +PD V Y +
Sbjct: 451 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 510
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
M+ Y GE+++A L M+ P+V NS+I A + DEA M M+
Sbjct: 511 MMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 570
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + YNTL++ L GK+ EA E+ MV+KG
Sbjct: 571 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 605
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 127/276 (46%), Gaps = 2/276 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N+LI E + + F++ K P +YN +L A + + +Y++M
Sbjct: 789 TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL-DEMGRSGFSPDFHTYNILLHVLGKGDK 130
S P+ +T+NIV+ + G +D L D M FSP TY L+ L K +
Sbjct: 849 SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M + G P+ + L++G +AG DA F M +G PD+ Y+V
Sbjct: 909 LYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 968
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM-ESR 249
++ G +++ F + G P+V YN +I G + +EA + EM +SR
Sbjct: 969 LVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSR 1028
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ YN+L+ NL AG + EA ++ + G
Sbjct: 1029 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG 1064
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 115/223 (51%), Gaps = 1/223 (0%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+F P +Y ++ L + + +++ MSD G P+ YNI++ + G+ D
Sbjct: 888 DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAA 947
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L M + G PD TY++L+ L + L+ +KE G +P V+ + +++G
Sbjct: 948 CALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIING 1007
Query: 160 LSRAGNLDACKYFFDEMA-NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + L+ F+EM ++G PD+ Y +I + AG +E+A +++ + G P
Sbjct: 1008 LGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1067
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
NVFT+N++IRG+ ++GK + A + + M + G +PN Y L
Sbjct: 1068 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 131/315 (41%), Gaps = 37/315 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TF I I G G + E + P +Y ++ AL R+
Sbjct: 255 GLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCA 314
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ V+ +M + PD +TY I + ++ + LD ++ EM + G PD T+ IL+
Sbjct: 315 KEVFAKMKTGRHKPDRVTY-ITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVD 373
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K A L+ M++ G P++ + TL+ GL R LD FD M + G P
Sbjct: 374 ALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKP 433
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV----------------------- 220
Y V I Y +G+ A + F+ M TKG PN+
Sbjct: 434 TAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIF 493
Query: 221 ------------FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
TYN M++ + G+ DEA ++ EM C P+ +V N+L++ L A
Sbjct: 494 YGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKA 553
Query: 269 GKLAEAHEVIRHMVE 283
++ EA ++ M E
Sbjct: 554 DRVDEAWKMFMRMKE 568
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 100/214 (46%), Gaps = 1/214 (0%)
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D G P + TYN+++ ++ + ++ +G PD TYN LL GK K
Sbjct: 780 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKID 839
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVM 191
+ M +P+ + ++ GL +AGN+D A ++D M+++ P Y +
Sbjct: 840 ELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 899
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I +G L +A+ LF+GM G PN YN +I GF AG+ D AC + K M G
Sbjct: 900 IDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV 959
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y+ LV L G++ E R + E G
Sbjct: 960 RPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESG 993
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 36/215 (16%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+NILI G+ G A F ++M
Sbjct: 931 YNILINGFGKAGEADAACALF-----------------------------------KRMV 955
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
EG PD+ TY++++ +G++D+ E+ SG +PD YN++++ LGK +
Sbjct: 956 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLE 1015
Query: 133 AALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L N MK+ G P + + +L+ L AG ++ ++E+ G P+V + +
Sbjct: 1016 EALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1075
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
I Y +G+ E A ++ M+T G PN TY +
Sbjct: 1076 IRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 157/308 (50%), Gaps = 12/308 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+ T+NILI C G + +A + F K + P +YN ++
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTL---FDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+R+ + + M+ +G P++++YN+V+ R G++ + +L EM R G+S D T
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K AL + M G PSV+ +T+L+ + +AGN++ F D+M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ YT ++ + G + +A + M G P+V TYN++I G C+ GK +
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A ++++M+ +G +P+ + Y+T++S + + EA V R MVEKG Y L+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 292 SKFKRYKR 299
F +R
Sbjct: 493 QGFCEQRR 500
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 1/279 (0%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEW 66
+T+ F++++ + + L K + ++ F P SYNA+L A + R E
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+++M + +P++ TYNI++ G +D L D+M G P+ TYN L+
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K LL M G +P+++ + +++GL R G + + EM +G D V
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y G +A + M+ G P+V TY S+I C AG + A + +M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG PN Y TLV G + EA+ V+R M + G
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 124/248 (50%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
L P SYN +++ L + K + +V +M+ GY+ D +TYN ++ + G
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
Q + EM R G +P TY L+H + K A+ L+ M+ G P+ +TTL+
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
DG S+ G ++ EM + G P VV Y +I + G++E A + + M KG
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+V +Y++++ GFC + DEA + +EM +G P+ + Y++L+ + EA ++
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 278 IRHMVEKG 285
M+ G
Sbjct: 508 YEEMLRVG 515
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 137/284 (48%), Gaps = 12/284 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T+N LI C G A + ++ L P +Y +++H++
Sbjct: 301 MNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL---TPSVITYTSLIHSMCK 357
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
QM G P+ TY ++ + G +++ +R+L EM +GFSP T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 118 YNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
YN L++ V GK + +A +L MKE G P V+ ++T++ G R+ ++D
Sbjct: 418 YNALINGHCVTGKMEDAIA---VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM KG PD + Y+ +I + ++A DL++ M+ G P+ FTY ++I +CM G
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEG 534
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++A + EM +G P+ + Y+ L++ L + EA ++
Sbjct: 535 DLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 130/270 (48%), Gaps = 3/270 (1%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
+ A V + ++S++ P +YN ++ + ++ +M +G P+++T
Sbjct: 186 ISFAENVFKEMLESQV---SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVT 242
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ +L K+D +LL M G P+ +YN++++ L + + +L M
Sbjct: 243 YNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMN 302
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G+ + + TL+ G + GN EM G P V+ YT +I S AG +
Sbjct: 303 RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMN 362
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A + D M +G PN TY +++ GF G +EA +++EM G +P+ + YN L+
Sbjct: 363 RAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI 422
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ GK+ +A V+ M EKG +VS
Sbjct: 423 NGHCVTGKMEDAIAVLEDMKEKGLSPDVVS 452
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 19/305 (6%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQYK 62
G RT+ L+ + G + + F P +YNA++ H + G +
Sbjct: 375 GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDA 434
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V + M ++G +PD+++Y+ V+ R +D+ R+ EM G PD TY+ L+
Sbjct: 435 I--AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ + A +L M VG P +T L++ G+L+ +EM KG +
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN---------------SMI 227
PDVV Y+V+I +A+ L + + +P+ TY+ S+I
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 612
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+GFCM G EA + + M + P+ YN ++ AG + +A+ + + MV+ G
Sbjct: 613 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL 672
Query: 288 IHLVS 292
+H V+
Sbjct: 673 LHTVT 677
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 135/302 (44%), Gaps = 25/302 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +NGF + T+N LI C G++ A V+E + L P SY+ +L
Sbjct: 406 MNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL---SPDVVSYSTVLSGF-- 460
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R Y + E V ++M ++G PD +TY+ ++ + + L +EM R G PD
Sbjct: 461 CRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDE 520
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L++ AL L N M E G P V+ ++ L++GL++ K +
Sbjct: 521 FTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLK 580
Query: 176 MANKGCMPDVVCYTVMITS---------------YIAAGELEKAQDLFDGMITKGQLPNV 220
+ + +P V Y +I + + G + +A +F+ M+ K P+
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDG 640
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
YN MI G C AG +A T+ KEM G + + LV L GK+ E + VI H
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700
Query: 281 MV 282
++
Sbjct: 701 VL 702
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ V++ M + + PD YNI++ R G + + + L EM +SGF T L+
Sbjct: 625 DQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKA 684
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K K +++ H+ L++ R GN+D EMA G +P+
Sbjct: 685 LHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 143/278 (51%), Gaps = 5/278 (1%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR--QYKL 63
P + +F ++ + GL + ++ F + K F +P YN +L ALLG ++ +
Sbjct: 104 IPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHM 163
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I VY+ M EG P++ TYN+++ A + GKLD +LL EM + G PD +Y ++
Sbjct: 164 IGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVA 223
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + + A + + G + V L+ GL R G + DEM G P
Sbjct: 224 AMCEDGRVEEAREV---ARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDP 280
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+VV Y+ +I+ GE+E A + MI +G PNV T++S+++G+ + G+ E +
Sbjct: 281 NVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLW 340
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ M G PN +VYNTL++ L +G LAEA +V M
Sbjct: 341 RVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM 378
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 139/277 (50%), Gaps = 4/277 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G VG +++ + + + P SY++++ L + + +L V +M G
Sbjct: 257 LCREGRVGEVFGLMDEMVGNGV---DPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGC 313
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P++ T++ +M + G++ + L M G P+ YN LL+ L A++
Sbjct: 314 RPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVD 373
Query: 137 LLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+ M++ F P+V ++TL+ G +AG+L +++M N G P+VV YT M+
Sbjct: 374 VCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVL 433
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
++A L D M T G P V T+N+ I+G C G+ A ++ +M+ GC P+
Sbjct: 434 CKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDT 493
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L+ L + +L EA E+IR + E+ ++LV+
Sbjct: 494 RTYNELLDGLFSVNELKEACELIRELEERKVELNLVT 530
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA-LL 56
M+ NG +++ +I GEV LA V+ + I+ RP +++++++ L
Sbjct: 273 MVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRR---GCRPNVHTFSSLMKGYFL 329
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDF 115
G R + + +++ M EG P+++ YN ++ G L + + M + F P+
Sbjct: 330 GGRVGEGVG-LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNV 388
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ L+H K A + N M G P+V+ +T+++D L + D D
Sbjct: 389 TTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDN 448
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
MA GC P VV + I G + A + D M G LP+ TYN ++ G +
Sbjct: 449 MATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNE 508
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC +++E+E R N + YNT++ + GK +V+ M+ G
Sbjct: 509 LKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNG 558
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 40/242 (16%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRS------------------------------- 109
LTY++++ R +LD H +L +M
Sbjct: 74 LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYR 133
Query: 110 ----GFSPDFHTYNILLHVL--GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
G P YN LL L G+K + +M+ G +P+V + L+ L +
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKN 193
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G LD EM+ +GC+PD V YT ++ + G +E+A+++ +G V
Sbjct: 194 GKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV---VSVC 250
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I G C G+ E +M EM G +PN + Y++++S L + G++ A V+ M+
Sbjct: 251 NALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIR 310
Query: 284 KG 285
+G
Sbjct: 311 RG 312
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ Y+LI+ M+ +G P ++T+N + G++ R++D+M R G PD TY
Sbjct: 441 QAYRLID----NMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTY 496
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N LL L ++ A L+ ++E + +++ + T+M G S G + M
Sbjct: 497 NELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLV 556
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFD 237
G PD + V+I +Y G++ A D + +L P++ + S++ G C + +
Sbjct: 557 NGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIE 616
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
EA + +M ++G PN ++ LV
Sbjct: 617 EAIVYLNKMLNKGIFPNIATWDVLV 641
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 15/282 (5%)
Query: 1 MIENGFPTTARTFNILI------CTCGE-VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
MI G TF+ L+ GE VGL R +V L RP YN +L+
Sbjct: 308 MIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMV-------LEGVRPNVVVYNTLLN 360
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
L V +M + + P++ TY+ ++ + G L + ++M G
Sbjct: 361 GLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVR 420
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ Y ++ VL K A L+++M G P+V+ F T + GL G +
Sbjct: 421 PNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRV 480
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
D+M GC+PD Y ++ + EL++A +L + + N+ TYN+++ GF
Sbjct: 481 VDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSS 540
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
GK + ++ M G P+ + N ++ GK+ A
Sbjct: 541 HGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTA 582
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 97/201 (48%), Gaps = 11/201 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G P T TFN I C G V A +VV++ + + P +YN +L L
Sbjct: 449 MATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQR---YGCLPDTRTYNELLDGLFS 505
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + K + +++ + +++TYN VM GK + ++L M +G PD T
Sbjct: 506 VNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAIT 565
Query: 118 YNILLHVLGKGDKPLAALNLLNHM---KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
N++++ K K A+ L+ + KE+ P ++ T+L+ G+ + ++ + +
Sbjct: 566 VNVVIYAYSKLGKVRTAIQFLDRITAGKELC--PDIIAHTSLLWGICNSLGIEEAIVYLN 623
Query: 175 EMANKGCMPDVVCYTVMITSY 195
+M NKG P++ + V++ +
Sbjct: 624 KMLNKGIFPNIATWDVLVRGF 644
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D MI KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM + G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 70/156 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM N G P++
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G +P+V T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +M +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|307103654|gb|EFN51912.1| hypothetical protein CHLNCDRAFT_59068 [Chlorella variabilis]
Length = 1025
Score = 137 bits (345), Expect = 6e-30, Method: Composition-based stats.
Identities = 75/270 (27%), Positives = 133/270 (49%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +I CG R+ +E + + + ++Y+A+++ + + L VY+QM
Sbjct: 197 TYTTMISQCGTQQQLRRALELVAEMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQM 256
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
EG P+++TYN ++ + G ++ R+LD + R G P+ TYN ++ +
Sbjct: 257 LAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQA 316
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL + M G P+ +T L+ + G LD F +M +GC +V+ Y+ +
Sbjct: 317 QEALRIYERMLAAGAQPTATTYTALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSL 376
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I++ AG E A +LF M T+G PNV TYNS+I ++++A M ++M+ RGC
Sbjct: 377 ISACEKAGRWELALELFREMHTEGCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRGC 436
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + + L++ AG A M
Sbjct: 437 KPDAVTFGGLIAAYDRAGHWRRALTAFEQM 466
Score = 114 bits (285), Expect = 6e-23, Method: Composition-based stats.
Identities = 59/216 (27%), Positives = 109/216 (50%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M G ++ TY+ +M + +LD + +M G +P+ TYN L+ V GK
Sbjct: 220 EMRSRGIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTG 279
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A+ +L+ ++ G DP + + T++ + +G ++ M G P YT
Sbjct: 280 AWEEAIRVLDALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYT 339
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I++Y G+L++A +F M+ +G NV TY+S+I AG+++ A + +EM +
Sbjct: 340 ALISAYGKNGQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTE 399
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + YN+L++ + +A E+ M +G
Sbjct: 400 GCRPNVVTYNSLIAACAQGAQWEKAQEMFEQMQHRG 435
Score = 99.8 bits (247), Expect = 1e-18, Method: Composition-based stats.
Identities = 60/232 (25%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 59 RQYKLIEWVYQQMSDEGYAP--DILTYNIVMCAKYRLGKLDQFHRLLD---EMGRSGFSP 113
R +L +W+ P + +TY ++ + G Q R L+ EM G
Sbjct: 172 RAQELFDWLRGLDDSHDLYPLCNTMTYTTMIS---QCGTQQQLRRALELVAEMRSRGIQC 228
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ HTY+ L++V KG++ AL++ M G P+++ + TL+D + G +
Sbjct: 229 NVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVTYNTLIDVYGKTGAWEEAIRVL 288
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D + +G P++ Y +I + +G+ ++A +++ M+ G P TY ++I +
Sbjct: 289 DALERQGIDPEIRTYNTVIIACNMSGQAQEALRIYERMLAAGAQPTATTYTALISAYGKN 348
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ D A + ++M RGC N + Y++L+S AG+ A E+ R M +G
Sbjct: 349 GQLDRALQIFQDMVRRGCERNVITYSSLISACEKAGRWELALELFREMHTEG 400
Score = 40.8 bits (94), Expect = 0.68, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 198 AGELEKAQDLFDGMITKG--------QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+G + +AQ+LFD + +G L N TY +MI + A ++ EM SR
Sbjct: 167 SGHVRRAQELFDWL--RGLDDSHDLYPLCNTMTYTTMISQCGTQQQLRRALELVAEMRSR 224
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G N Y+ L++ +L A +V R M+ +G +LV+
Sbjct: 225 GIQCNVHTYSALMNVCIKGNELDLALDVYRQMLAEGCTPNLVT 267
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T++ILI C ++ LA V+ + +K + P + +++L+ ++
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK---LGYEPNIVTLSSLLNGYCHSKRI 167
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM GY P+ +T+N ++ + K + L+D M G PD TY ++
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 122 LHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K GD L A NLLN M++ +P VL + T++DGL + ++D F EM KG
Sbjct: 228 VNGLCKRGDTDL-AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 286
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
P+VV Y+ +I+ +++ G+L +A+
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L+D M+ + P++ TY+S+I GFCM + DEA M + M S+ C P+ + YNTL+
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ E EV R M ++G
Sbjct: 407 CKYKRVEEGMEVFREMSQRG 426
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +++ C G+ LA ++ + + KL P YN I+ L
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL---EPGVLIYNTIIDGLCK 268
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G P+++TY+ ++ G+ RLL +M +PD T
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K K + A L + M + DPS++ +++L++G LD K F+ M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PDVV Y +I + +E+ ++F M +G + N TYN +I+G AG D
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + KEM S G PN + YNTL+ L GKL +A V ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ TFN LI + A +++R + +P +Y +++ L
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK---GCQPDLVTYGVVVNGLCK 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
L + +M P +L YN ++ + +D L EM G P+ T
Sbjct: 234 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L + A LL+ M E +P V F+ L+D + G L + +DEM
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P +V Y+ +I + L++A+ +F+ M++K P+V TYN++I+GFC + +
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E + +EM RG N + YN L+ L AG A E+ + MV G
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + +K + P +Y+++++
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI---DPSIVTYSSLINGFCM 373
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + PD++TYN ++ + ++++ + EM + G + T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 433
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L + A + M G P+++ + TL+DGL + G L+ F+ +
Sbjct: 434 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P + Y +MI AG++E DLF + KG P+V YN+MI GFC G +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + KEM+ G PN YNTL+ + LR+ + A A E+I+ M
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA-ELIKEM 597
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 130/246 (52%), Gaps = 4/246 (1%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RPF + ++ +L A+ + ++ ++ + +QM + G + TY+I++ R +L
Sbjct: 76 RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 135
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G+ P+ T + LL+ + A+ L++ M G+ P+ + F TL+ G
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-P 218
L D M KGC PD+V Y V++ G+ + A +L + M +G+L P
Sbjct: 196 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEP 254
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
V YN++I G C D+A + KEME++G PN + Y++L+S L N G+ ++A ++
Sbjct: 255 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 279 RHMVEK 284
M+E+
Sbjct: 315 SDMIER 320
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 9/283 (3%)
Query: 7 PTTARTFNILICTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P +++ C C G A +++ I+ K+ P +++A++ A +++ KL+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI---NPDVFTFSALIDAF--VKEGKLV 343
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +Y +M P I+TY+ ++ +LD+ ++ + M PD TYN L+
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + + + M + G + + + L+ GL +AG+ D + F EM + G
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+++ Y ++ G+LEKA +F+ + P ++TYN MI G C AGK ++ +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +G P+ + YNT++S G EA + + M E G
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 13/280 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ + T++ LI C + A+++ E + F P +YN ++ G
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF---PDVVTYNTLIK---G 405
Query: 58 IRQYKLIEW---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+YK +E V+++MS G + +TYNI++ ++ G D + EM G P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN LL L K K A+ + +++ +P++ + +++G+ +AG ++ F
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ KG PDVV Y MI+ + G E+A LF M G LPN YN++IR G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ + ++KEM S G + LV+N+ + G+L ++
Sbjct: 586 DREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 624
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 8/251 (3%)
Query: 57 GIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
G+ + KL + V + +M P I+ ++ ++ A ++ K D L ++M G +
Sbjct: 56 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 115
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY+IL++ + + AL +L M ++G++P+++ ++L++G + + D
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M G P+ V + +I + +A L D M+ KG P++ TY ++ G C G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYI 288
D A ++ +ME P L+YNT++ L + +A + + M KG Y
Sbjct: 236 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 289 HLVSKFKRYKR 299
L+S Y R
Sbjct: 296 SLISCLCNYGR 306
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T T+NI+I + G + F L +P +YN ++ + + ++
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M ++G P+ YN ++ A+ R G + L+ EM GF+ D T ++ ++L G
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Query: 129 DKPLAALNLLN 139
+ L++L+
Sbjct: 620 RLDKSFLDMLS 630
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVJEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ G P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 138/281 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ GF T+ LI +VG + + N +P Y +I+ +L RQ
Sbjct: 161 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 220
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ QM +G +PDI TY ++ A L + LL++M S PD ++
Sbjct: 221 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 280
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A +++ M + G +P V+ +TTLMDG +D FD M KG
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ YT +I Y +++KA LF+ M K +P+ TYN+++ G C G+ +A
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ EM +RG P+ + Y+ L+ +L L EA +++ +
Sbjct: 401 ALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAI 441
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 139/286 (48%), Gaps = 3/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
PTT T +C G++G A + ++ I F+P +Y +++ L +
Sbjct: 135 PTTFTTLIRGLCVEGKIGEALHLFDKMIDE---GFQPNVVTYGTLINGLCKVGNTSAAIR 191
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M PD++ Y ++ + + ++ + L +M G SPD TY L+H L
Sbjct: 192 LLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALC 251
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ LLN M P V+ F+T++D L + G + D M +G PDVV
Sbjct: 252 NLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVV 311
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ + E+++A +FD M+ KG P+V +Y ++I G+C K D+A + +EM
Sbjct: 312 TYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEM 371
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ P+ YNTL+ L + G+L +A + MV +G+ LV+
Sbjct: 372 CRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVT 417
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 128/243 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L ++ ++ Y + + QM G P++ T NI++ + L ++ +
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M + GF P+V+ + TL++GL +
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M C PDVV YT +I S ++ +A +LF M+ +G P++FT
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S++ C ++ T++ +M + P+ ++++T+V L GK+ EAHE++ M+
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302
Query: 283 EKG 285
++G
Sbjct: 303 QRG 305
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V A ++V+ I+ + P +Y ++ + V+ M +G+
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGV---EPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APD+++Y ++ ++ K+D+ L +EM R + PD TYN L++ L + A+
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P ++ ++ L+D L + +L+ + PD+ Y ++I
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 461
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG P+V+TYN MI G C G +EA + EM+ C+P+
Sbjct: 462 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 521
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+ + A +++ M+ +G
Sbjct: 522 TYNTIARGFLQNNETLRAIQLLEEMLARG 550
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ PD T+ ++ GK+ + L D+M GF P+ TY L++ L K AA
Sbjct: 130 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 189
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ LL M++ P V+ +T+++D L + + F +M +G PD+ YT ++ +
Sbjct: 190 IRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHA 249
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
E + L + M+ LP+V +++++ C GK EA ++ M RG P+
Sbjct: 250 LCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPD 309
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ Y TL+ ++ EA +V MV KG ++S
Sbjct: 310 VVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVIS 347
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L F+RLL P + LL + K L+L M G P+V
Sbjct: 50 LSSFNRLLHMHP----PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ + ++ G PD +T +I G++ +A LFD MI +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV TY ++I G C G A +++ ME C P+ ++Y +++ +L ++ EA
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225
Query: 276 EVIRHMVEKG 285
+ MV +G
Sbjct: 226 NLFSQMVGQG 235
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+FH+ ++ + L D L++ N L HM PS++ F L+ +++ +
Sbjct: 35 NFHSKSLHFNTL---DDALSSFNRLLHMHP---PPSIVDFAKLLTSIAKMKHYSTVLSLS 88
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M + G P+V ++I S+ + A + ++ G P+ T+ ++IRG C+
Sbjct: 89 TQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVE 148
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK EA + +M G PN + Y TL++ L G + A ++R M E+G
Sbjct: 149 GKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQG 199
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 76/209 (36%), Gaps = 36/209 (17%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P T +T+N L+ VG + + F + P +Y+ +L +L R +
Sbjct: 378 PDT-KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMA 436
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + + PDI YNI++ R G+L+ L + G P TYNI++H
Sbjct: 437 LLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIH--- 493
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
GL + G L+ F EM C PD
Sbjct: 494 --------------------------------GLCKRGLLNEANKLFMEMDGNDCSPDGC 521
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKG 215
Y + ++ E +A L + M+ +G
Sbjct: 522 TYNTIARGFLQNNETLRAIQLLEEMLARG 550
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P YN I+ + + + ++ +S +G P + TYNI++ + G L++
Sbjct: 445 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 504
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
++L EM + SPD TYN + + ++ L A+ LL M GF
Sbjct: 505 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 20/292 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVE----RFIKSKLFNFRPFKNSY---NA 50
M + G R+F ILI C GE+ A K+ + R IK L +F +
Sbjct: 252 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 311
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+ HA+ +R+ + G PD + Y +V+ R G + R+ DEM G
Sbjct: 312 MDHAMAYLREMRCF----------GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 361
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD TYN LL+ L K + L A LLN M+E G P + FTTL+ G G LD
Sbjct: 362 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 421
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
FD M N+ PD+V Y +I G+L+KA DL+D M ++ PN TY+ +I
Sbjct: 422 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 481
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
C G+ ++A + EM ++G PN + YN+++ +G +++ + ++ M+
Sbjct: 482 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 533
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N ++ G+ K E F + F P S+ ++ + +
Sbjct: 217 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 276
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +Y++M G PD+++++ ++ R GK+D L EM G PD Y +
Sbjct: 277 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 336
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + AL + + M G P V+ + TL++GL + L + +EM +G
Sbjct: 337 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 396
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ +T +I Y G+L+KA LFD M+ + P++ TYN++I G C G D+A
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M SR PN + Y+ L+ + G++ +A + M+ KG
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 501
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 6 FPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T N+++ G+ A +V+ + L +P +YN++L L +
Sbjct: 188 FPDVV-THNVMVDARFRAGDAEAAMALVDSMVSKGL---KPGIVTYNSVLKGLCRSGMWD 243
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
V+++M D G APD+ ++ I++ R+G++++ ++ EM G PD +++ L+
Sbjct: 244 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 303
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ + K A+ L M+ G P + +T ++ G RAG + DEM GC+
Sbjct: 304 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 363
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y ++ L A+ L + M +G P++ T+ ++I G+C+ GK D+A +
Sbjct: 364 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 423
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
M ++ P+ + YNTL+ + G L +A+++ M
Sbjct: 424 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 462
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 2/242 (0%)
Query: 46 NSY--NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
N+Y N ++H ++ ++ V +M PD++T+N+++ A++R G + L+
Sbjct: 155 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 214
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D M G P TYN +L L + A + M + G P V FT L+ G R
Sbjct: 215 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 274
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G ++ + EM ++G PD+V ++ +I + G+++ A M G +P+ Y
Sbjct: 275 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 334
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+I GFC AG +A + EM GC P+ + YNTL++ L +L +A ++ M E
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 284 KG 285
+G
Sbjct: 395 RG 396
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +L+ L R+ E + +M + G PD+ T+ ++ GKLD+ +L D M
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
PD TYN L+ + + A +L + M P+ + ++ L+D G +
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F DEM NKG +P+++ Y +I Y +G + K Q M+ P++ TYN++
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+ K +A ++ ME P+ + YN L++ G + EA + M KG
Sbjct: 548 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 606
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M ++ PDI+TYN ++ R G LD+ + L D+M P+ TY+IL+
Sbjct: 423 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 482
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A L+ M G P+++ + +++ G R+GN+ + F +M PD++
Sbjct: 483 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 542
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I YI ++ A L + M + P+V TYN +I GF + G EA + ++M
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++G P+ Y ++++ AG EA ++ M+++G
Sbjct: 603 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 641
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 6/211 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A + + ++F P +Y+ ++ + Q +
Sbjct: 438 TYNTLIDGMCRQGDLDKANDLWDDMHSREIF---PNHVTYSILIDSHCEKGQVEDAFGFL 494
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G P+I+TYN ++ R G + + + L +M + SPD TYN L+H K
Sbjct: 495 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 554
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK A LLN M++ P V+ + L++G S GN+ + F++M KG PD Y
Sbjct: 555 DKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 614
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
MI ++ AG ++A L D M+ +G P+
Sbjct: 615 MSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G P TF LI C G++ A ++ + + +L RP +YN ++ +
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL---RPDIVTYNTLIDGMCR 448
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ M P+ +TY+I++ + G+++ LDEM G P+ T
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ + L M P ++ + TL+ G + + + M
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 568
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PDVV Y ++I + G +++A +F+ M KG P+ +TY SMI G AG
Sbjct: 569 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 628
Query: 238 EACTMMKEMESRGCNPN 254
EA + EM RG P+
Sbjct: 629 EAFQLHDEMLQRGFAPD 645
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A D EM + PDVV + VM+ + AG+ E A L D M++KG P +
Sbjct: 168 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIV 227
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYNS+++G C +G +D+A + KEM+ G P+ + L+ G++ EA ++ + M
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287
Query: 282 VEKGKYIHLVS 292
+G LVS
Sbjct: 288 RHRGIKPDLVS 298
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 155/320 (48%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T++ILI C ++ LA V+ + +K + P + +++L+ ++
Sbjct: 725 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK---LGYEPNIVTLSSLLNGYCHSKRI 781
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM GY P+ +T+N ++ + K + L+D M G PD TY ++
Sbjct: 782 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 841
Query: 122 LHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K GD L A NLLN M++ +P VL + T++DGL + ++D F EM KG
Sbjct: 842 VNGLCKRGDTDL-AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 900
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
P+VV Y+ +I+ +++ G+L +A+
Sbjct: 901 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 960
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L+D M+ + P++ TY+S+I GFCM + DEA M + M S+ C P+ + YNTL+
Sbjct: 961 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 1020
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ E EV R M ++G
Sbjct: 1021 CKYKRVEEGMEVFREMSQRG 1040
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +++ C G+ LA ++ + + KL P YN I+ L
Sbjct: 826 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL---EPGVLIYNTIIDGLCK 882
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G P+++TY+ ++ G+ RLL +M +PD T
Sbjct: 883 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 942
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K K + A L + M + DPS++ +++L++G LD K F+ M
Sbjct: 943 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 1002
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PDVV Y +I + +E+ ++F M +G + N TYN +I+G AG D
Sbjct: 1003 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 1062
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + KEM S G PN + YNTL+ L GKL +A V ++
Sbjct: 1063 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 1106
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ T L+ C V A +V++ ++ ++P +YNAI+ +L
Sbjct: 249 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE---IGYKPDIVAYNAIIDSLCK 305
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++++ +G P+++TY ++ + RLL +M + +P+ T
Sbjct: 306 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 365
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ LL K K L A L M + DP ++ +++L++GL +D FD M
Sbjct: 366 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 425
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC+ DVV Y +I + A +E LF M +G + N TYN++I+GF AG D
Sbjct: 426 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 485
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +M+ G +P+ YN L+ L + G+L +A + M ++ + +V+
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 540
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ TFN LI + A +++R + +P +Y +++ L
Sbjct: 791 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK---GCQPDLVTYGVVVNGLCK 847
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
L + +M P +L YN ++ + +D L EM G P+ T
Sbjct: 848 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVT 907
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L + A LL+ M E +P V F+ L+D + G L + +DEM
Sbjct: 908 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 967
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P +V Y+ +I + L++A+ +F+ M++K P+V TYN++I+GFC + +
Sbjct: 968 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 1027
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E + +EM RG N + YN L+ L AG A E+ + MV G
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP+ FN L+ ++ V+ K ++ R ++N +++ Q L
Sbjct: 185 FPSIV-DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 243
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ +M GY PD +T ++ R ++ L+D+M G+ PD YN ++ L
Sbjct: 244 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 303
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + A + ++ G P+V+ +T L++GL + +M K P+V
Sbjct: 304 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 363
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y+ ++ +++ G++ +A++LF+ M+ P++ TY+S+I G C+ + DEA M
Sbjct: 364 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 423
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S+GC + + YNTL++ A ++ + ++ R M ++G
Sbjct: 424 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + +K + P +Y+++++
Sbjct: 931 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI---DPSIVTYSSLINGFCM 987
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + PD++TYN ++ + ++++ + EM + G + T
Sbjct: 988 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 1047
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L + A + M G P+++ + TL+DGL + G L+ F+ +
Sbjct: 1048 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 1107
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P + Y +MI AG++E DLF + KG P+V YN+MI GFC G +
Sbjct: 1108 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 1167
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + KEM+ G PN YNTL+ + LR+ + A A E+I+ M
Sbjct: 1168 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA-ELIKEM 1211
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 130/246 (52%), Gaps = 4/246 (1%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RPF + ++ +L A+ + ++ ++ + +QM + G + TY+I++ R +L
Sbjct: 690 RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLA 749
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G+ P+ T + LL+ + A+ L++ M G+ P+ + F TL+ G
Sbjct: 750 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 809
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-P 218
L D M KGC PD+V Y V++ G+ + A +L + M +G+L P
Sbjct: 810 LFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEP 868
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
V YN++I G C D+A + KEME++G PN + Y++L+S L N G+ ++A ++
Sbjct: 869 GVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 928
Query: 279 RHMVEK 284
M+E+
Sbjct: 929 SDMIER 934
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G+ +N +I + + + F + + RP +Y A+++ L +
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M + P+++TY+ ++ A + GK+ + L +EM R PD TY+
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L D+ A + + M G V+ + TL++G +A ++ F EM+ +G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + V Y +I + AG+++KAQ+ F M G P+++TYN ++ G C G+ ++A
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M+ R + + + Y T++ + GK+ EA + + KG
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 568
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C A +++ IK K+ P +Y+A+L A ++ K++E ++++M
Sbjct: 338 LCNSSRWSDAARLLSDMIKKKI---TPNVITYSALLDAF--VKNGKVLEAKELFEEMVRM 392
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
PDI+TY+ ++ ++D+ +++ D M G D +YN L++ K +
Sbjct: 393 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 452
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L M + G + + + TL+ G +AG++D + FF +M G PD+ Y +++
Sbjct: 453 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 512
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
GELEKA +F+ M + ++ TY ++IRG C GK +EA ++ + +G P+
Sbjct: 513 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 572
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T++S L G L E + M ++G
Sbjct: 573 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 603
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 140/272 (51%), Gaps = 8/272 (2%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RPF + +N +L A++ +++Y ++ + ++M G D+ T+NIV+
Sbjct: 177 SDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 236
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
++ +L +M + G+ PD T L++ + ++ A++L++ M E+G+ P ++ +
Sbjct: 237 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 296
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
++D L + ++ FF E+ KG P+VV YT ++ + A L MI
Sbjct: 297 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 356
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
K PNV TY++++ F GK EA + +EM +P+ + Y++L++ L ++ E
Sbjct: 357 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 416
Query: 274 AHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A+++ MV KG Y L++ F + KR
Sbjct: 417 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 448
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 9/283 (3%)
Query: 7 PTTARTFNILICTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P +++ C C G A +++ I+ K+ P +++A++ A +++ KL+
Sbjct: 903 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI---NPDVFTFSALIDAF--VKEGKLV 957
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +Y +M P I+TY+ ++ +LD+ ++ + M PD TYN L+
Sbjct: 958 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 1017
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + + + M + G + + + L+ GL +AG+ D + F EM + G
Sbjct: 1018 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 1077
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+++ Y ++ G+LEKA +F+ + P ++TYN MI G C AGK ++ +
Sbjct: 1078 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 1137
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +G P+ + YNT++S G EA + + M E G
Sbjct: 1138 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 1180
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 13/280 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ + T++ LI C + A+++ E + F P +YN ++ G
Sbjct: 966 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF---PDVVTYNTLIK---G 1019
Query: 58 IRQYKLIEW---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+YK +E V+++MS G + +TYNI++ ++ G D + EM G P+
Sbjct: 1020 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 1079
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN LL L K K A+ + +++ +P++ + +++G+ +AG ++ F
Sbjct: 1080 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 1139
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ KG PDVV Y MI+ + G E+A LF M G LPN YN++IR G
Sbjct: 1140 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 1199
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ + ++KEM S G + LV+N+ + G+L ++
Sbjct: 1200 DREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 1238
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 119/251 (47%), Gaps = 8/251 (3%)
Query: 57 GIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
G+ + KL + V + +M P I+ ++ ++ A ++ K D L ++M G +
Sbjct: 670 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN 729
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY+IL++ + + AL +L M ++G++P+++ ++L++G + + D
Sbjct: 730 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 789
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M G P+ V + +I + +A L D M+ KG P++ TY ++ G C G
Sbjct: 790 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRG 849
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYI 288
D A ++ +ME P L+YNT++ L + +A + + M KG Y
Sbjct: 850 DTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYS 909
Query: 289 HLVSKFKRYKR 299
L+S Y R
Sbjct: 910 SLISCLCNYGR 920
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +++ ++ + ++++MS G + +TYN ++ ++ G +D+ +M
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SPD TYNILL L + AL + M++ D ++ +TT++ G+ + G +
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 554
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F ++ KG PD+V YT M++ G L + + L+ M +G + N T +
Sbjct: 555 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD- 613
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G + ++K+M S G P+ L
Sbjct: 614 -------GDITLSAELIKKMLSCGYAPSLL 636
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A+++ E ++ + P +Y+++++ L + ++ M +G D+
Sbjct: 377 GKVLEAKELFEEMVR---MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 433
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
++YN ++ + +++ +L EM + G + TYN L+ + A +
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P + + L+ GL G L+ F++M + D+V YT +I G+
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+E+A LF + KG P++ TY +M+ G C G E + +M+ G N +
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN----DC 609
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
+S+ G + + E+I+ M+ G L+ K
Sbjct: 610 TLSD----GDITLSAELIKKMLSCGYAPSLLKDIK 640
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M + PS++ F L+ + + D +M G D+ + ++I
Sbjct: 172 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 231
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ ++ A + M+ G P+ T S++ GFC + +A +++ +M G P
Sbjct: 232 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 291
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + YN ++ +L ++ +A + + + KG ++V+
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 330
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T T+NI+I + G + F L +P +YN ++ + + ++
Sbjct: 1114 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 1173
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M ++G P+ YN ++ A+ R G + L+ EM GF+ D T ++ ++L G
Sbjct: 1174 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 1233
Query: 129 DKPLAALNLLN 139
+ L++L+
Sbjct: 1234 RLDKSFLDMLS 1244
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 156/327 (47%), Gaps = 35/327 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG T+N ++ ++ + K + P +YN+++ L +
Sbjct: 257 MVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 316
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G PDI TY ++ G L + H LLD M R+G PD H +NI
Sbjct: 317 STEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNI 376
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K +K A+ + + M++ G +P+V+ + ++ L ++G++D +F++M ++G
Sbjct: 377 LICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQD---------------------------------- 206
P+++ YT +I S + +KA++
Sbjct: 437 LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESE 496
Query: 207 -LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G PNV TY+++I G+C+AGK DEA ++ M S G P+ + YNTL++
Sbjct: 497 KLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGY 556
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ +A + + MV G ++++
Sbjct: 557 CRVSRMDDALALFKEMVSSGVSPNIIT 583
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 108/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +M D +PD++TY+ ++ A + +D+ +L M ++G P+ TYN +LH
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYC 277
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
++P A+ L M+ G +P V+ + +LMD L + G + FD M +G PD+
Sbjct: 278 SSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIA 337
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ Y G L + L D M+ G P+ +N +I + K DEA + +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G NPN + Y ++ L +G + +A M+++G
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG 436
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 2/234 (0%)
Query: 59 RQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+Q K+ E V+ +M G P+++TY V+ + G +D ++M G +P+
Sbjct: 383 KQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNII 442
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y L+H L DK A L+ M + G + + F +++ + G + + FD M
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P+V+ Y+ +I Y AG++++A L M + G P+ TYN++I G+C +
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
D+A + KEM S G +PN + YN ++ L + + A A E+ + + G + L
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLEL 616
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNILIC + + + F K + P +Y A++ L
Sbjct: 362 MVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGS 421
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++QM DEG P+I+ Y ++ + K D+ L+ EM G + +N
Sbjct: 422 VDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNS 481
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H K + + + L + M +G P+V+ ++TL+DG AG +D M + G
Sbjct: 482 IIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVG 541
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V Y +I Y ++ A LF M++ G PN+ TYN +++G + A
Sbjct: 542 MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAK 601
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
+ + G YN ++ L
Sbjct: 602 ELYVGITKSGTQLELSTYNIILHGL 626
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 5/202 (2%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-- 144
+CA R D +L M PD + ILL L ++ AL LL+ M +
Sbjct: 132 LCADKRTS--DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG 189
Query: 145 -GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P V+ +TT+++G + G+ D + EM ++ PDVV Y+ +I + ++K
Sbjct: 190 GGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK 249
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A ++ M+ G +PN TYNS++ G+C + + EA +K+M S G P+ + YN+L+
Sbjct: 250 AMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMD 309
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 310 YLCKNGRSTEARKIFDSMTKRG 331
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 126/285 (44%), Gaps = 12/285 (4%)
Query: 9 TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG-IRQYKLI 64
T T+ ILI C G + L + +K FR ++ +L L R +
Sbjct: 86 TVHTYGILIGCCCRAGRLDLGFAALGNVVKK---GFRVEAITFTPLLKGLCADKRTSDAM 142
Query: 65 EWVYQQMSDEGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V ++M++ PD+ + I++ C + R + L+ H + D+ G G +PD +Y
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG-GGSAPDVVSYTT 201
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K A + + M + P V+ +++++ L + +D M G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MP+ + Y ++ Y ++ + ++A M + G P+V TYNS++ C G+ EA
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M RG P+ Y TL+ G L E H ++ MV G
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 467 MLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR---IGVKPNVITYSTLIDGYCL 523
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +TYN ++ R+ ++D L EM SG SP+ T
Sbjct: 524 AGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIIT 583
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + AA L + + G + + ++ GL + D F +
Sbjct: 584 YNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 643
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +P+V TY+ M G +
Sbjct: 644 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 703
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + ME GC N + N++V L G + A + + EK
Sbjct: 704 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEK 750
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 141/287 (49%), Gaps = 19/287 (6%)
Query: 27 RKVVERFIKSKLFN-------------FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E F+K K F + +N ++H + +L + V+ +++
Sbjct: 105 RKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITK 164
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P ++++N +M RLG LD+ RL M SG PD +TY++L++ L K K
Sbjct: 165 WGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMND 224
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M G P+ + FTTL+DG + G++D + EM +G PD++ Y +I
Sbjct: 225 ANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIY 284
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L++AQDL D M KG P+ TY ++I G C G + A K M
Sbjct: 285 GLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRL 344
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLVSKF 294
+ + Y L+S L G+ A +++R M+ + G Y ++++F
Sbjct: 345 DDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEF 391
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITK---WGLRPSVVSFNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K++ + L DEM +G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K A+ M GF P ++ + TL+ GL + G+L + DEM+
Sbjct: 244 FTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A MI + + Y ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P+ Y +++ G + ++++ M G
Sbjct: 364 GAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDG 411
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI NG TF LI C G + LA + + ++ F P +YN +++ L
Sbjct: 232 MIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQ---GFSPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ + M + D
Sbjct: 289 EGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P +T +++ + G++ EM
Sbjct: 349 YTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGHVPCVV 417
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 140/276 (50%), Gaps = 7/276 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P TA TF L+ C G++G A V ++ + F+P +Y +++ L RQ
Sbjct: 124 PDTA-TFTTLVRGLCVVGKIGEALDVFDKMVGE---GFQPNVVTYGTLMNGLCKDRQLTE 179
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ +M +G +PDI TYN ++ A L + LL+EM +S P+ + NI++
Sbjct: 180 ALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVD 239
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K K A ++++ M + G +P V+ + LMDG +D FD M GC+
Sbjct: 240 ALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVC 299
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+VV Y +I Y ++KA LF+ M + +PN TY+++I G C G+ +A +
Sbjct: 300 NVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALF 359
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
EM + G PN + Y+ L+ L +LAEA +++
Sbjct: 360 NEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLK 395
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T I+I C V A V+ + +K +P ++ ++ L + +
Sbjct: 86 GIPPDVYTLTIVINSFCHLNRVDFALSVLAKILK---LGHQPDTATFTTLVRGLCVVGKI 142
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V+ +M EG+ P+++TY +M + +L + L EM G SPD TYN L
Sbjct: 143 GEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSL 202
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L + LLN M + P+V+ ++D L + G + D M G
Sbjct: 203 IHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDVV Y ++ + E+++A +FD M+ G + NV +YN++I G+C + D+A
Sbjct: 263 EPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMY 322
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + PN + Y+TL+ L + G+L +A + MV G+ +LV+
Sbjct: 323 LFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVT 373
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++ + NI++ C G+V A VV+ I+ + P +Y A++
Sbjct: 222 MVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV---EPDVVTYAALMDGHCL 278
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V+ M G ++++YN ++ ++ ++D+ L +EM R P+ T
Sbjct: 279 RSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT 338
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+H L + A+ L N M G P+++ ++ L+D L + L +
Sbjct: 339 YSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIE 398
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDV Y + I AG+LE A+DLF + +G P+V+T+N MIRG C G D
Sbjct: 399 GSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLD 458
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +EM+ GC N YNT+ L K + A +++ M+ +G
Sbjct: 459 EASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 8/273 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALL 56
MI+ G T+ L+ C E+ A KV + +++ + N SYN +++
Sbjct: 257 MIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVV----SYNTLINGYC 312
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
I++ +++++M + P+ +TY+ ++ +G+L L +EM G P+
Sbjct: 313 KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLV 372
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+ILL L K + A+ LL ++ DP V + +DG+ RAG+L+A + F +
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
A +G PDV + +MI G L++A LF M G L N TYN++ +G K
Sbjct: 433 APRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKT 492
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
A +++EM +RG + + LV L + G
Sbjct: 493 SRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 117/253 (46%), Gaps = 10/253 (3%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
F+ S NF+ +N + AL + +M P I + ++ + +
Sbjct: 19 FLSSSQNNFQSKSLHFNTLDDALSS----------FHRMLHMHPPPPIFEFAKLLTSIAK 68
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+ L +M G PD +T I+++ ++ AL++L + ++G P
Sbjct: 69 MKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTAT 128
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
FTTL+ GL G + FD+M +G P+VV Y ++ +L +A +LF MI
Sbjct: 129 FTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMI 188
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
KG P++FTYNS+I C ++ T++ EM PN + N +V L GK+
Sbjct: 189 AKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVT 248
Query: 273 EAHEVIRHMVEKG 285
EAH+V+ M++ G
Sbjct: 249 EAHDVVDMMIQGG 261
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 115/245 (46%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+ +L ++ ++ Y + + ++M G PD+ T IV+ + L ++D +L ++
Sbjct: 59 FAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKIL 118
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ G PD T+ L+ L K AL++ + M GF P+V+ + TLM+GL + L
Sbjct: 119 KLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
F EM KG PD+ Y +I + E + L + M+ +PNV + N ++
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 238
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
C GK EA ++ M G P+ + Y L+ ++ EA +V MV G
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298
Query: 288 IHLVS 292
++VS
Sbjct: 299 CNVVS 303
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 4/197 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L FHR+L P + LL + K L+L M G P V T
Sbjct: 41 LSSFHRML----HMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+++ +D ++ G PD +T ++ G++ +A D+FD M+ +G
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV TY +++ G C + EA + EM ++G +P+ YN+L+ L N +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 276 EVIRHMVEKGKYIHLVS 292
++ MV+ ++VS
Sbjct: 217 TLLNEMVKSKIMPNVVS 233
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 152/319 (47%), Gaps = 41/319 (12%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ ++ILI C G++ A K++E +++ N P +++ +++H + +
Sbjct: 425 GYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRN---NLAPDPSNFESLVHGFCKMGLW 481
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ M + G P I T N+++ A R G++++ L++EM G P+ TYN +
Sbjct: 482 VNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAV 541
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ L K K AL L M + PSV+ ++TL+DG ++ N + M G
Sbjct: 542 INRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGV 601
Query: 182 MPDVVCYTVMI-------------------------------TSYIAA----GELEKAQD 206
PD+V YT++I TS IA G++ KA
Sbjct: 602 TPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWA 661
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
LF+ M+ +G LP V TY S++ G+C + D A ++ EM+ +G P+ + YN L++ R
Sbjct: 662 LFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHR 721
Query: 267 NAGKLAEAHEVIRHMVEKG 285
G L +A E++ M E G
Sbjct: 722 RRGNLDKALEMLNEMKENG 740
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 131/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T++ILI C G+V ++E K N P SY+++ H L R
Sbjct: 355 GISPDVYTYSILIHGFCKQGDVEKGLYLIEEM---KYSNMEPSLVSYSSLFHGLCKKRLS 411
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +++ + GY D Y+I++ G LD H+L++EM R+ +PD + L
Sbjct: 412 DISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESL 471
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H K + AL N M E G PS+ ++D R G ++ +EM +G
Sbjct: 472 VHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGI 531
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++ Y +I + E+A +LF M+ + LP+V Y+++I GF +A
Sbjct: 532 FPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALM 591
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M G P+ + Y L++ L + ++ EA+ + + M E G
Sbjct: 592 LYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENG 635
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 6/264 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G + T N++I C G V A ++ +F P +YNA+++ L
Sbjct: 491 MLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIF---PNLFTYNAVINRLCK 547
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + ++ M P ++ Y+ ++ + + L M + G +PD
Sbjct: 548 ERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVA 607
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+++L + A NL M E G P + +T+++ G R G++ F+EM
Sbjct: 608 YTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEML 667
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P VV YT ++ Y ++ A L D M KG P+V TYN +I G D
Sbjct: 668 QRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLD 727
Query: 238 EACTMMKEMESRGCNPNFLVYNTL 261
+A M+ EM+ G P+ + Y L
Sbjct: 728 KALEMLNEMKENGVLPDHMTYMML 751
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 8/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALL 56
M NG T T++ I C G V A V I + L N YNAI+H L
Sbjct: 281 MERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVY----CYNAIIHGLC 336
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ V ++M G +PD+ TY+I++ + G +++ L++EM S P
Sbjct: 337 KKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLV 396
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+Y+ L H L K +L++ + G+ ++ L+ G G+LD+ +EM
Sbjct: 397 SYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
PD + ++ + G A + F+ M+ G LP++ T N +I C G+
Sbjct: 457 VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+EA +M EM+++G PN YN +++ L K A E+ M+++
Sbjct: 517 EEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKR 564
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 128/277 (46%), Gaps = 6/277 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F++LI + V+ F+++K S N +L L + + + ++++M
Sbjct: 181 VFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEM 240
Query: 72 SDEGYAPDILTYNIVM--CAKYRLGKLD----QFHRLLDEMGRSGFSPDFHTYNILLHVL 125
G P++ TY I+M K G+ D Q +L+EM R+G SP TY+ ++ L
Sbjct: 241 KSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGL 300
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ +AL+ + + +V + ++ GL + G LD +EM + G PDV
Sbjct: 301 CRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDV 360
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y+++I + G++EK L + M P++ +Y+S+ G C D + + ++
Sbjct: 361 YTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRD 420
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ + G + Y+ L+ G L AH+++ MV
Sbjct: 421 LGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 108/279 (38%), Gaps = 75/279 (26%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL-----A 133
D++ NI C + R+G+ R++ R H ++L V+ K K L
Sbjct: 55 DLVEINIQKC-QLRVGRKRNEIRVMKRRSR------IHRKHVLSPVVVKVFKSLNWEVAR 107
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG-------------------NLDACKYFFD 174
+ MK+ GF S+ F T+++ L+ AG NLDA + F
Sbjct: 108 HIKFSTTMKKYGFSRSIDAFRTVVNVLALAGMHMEVYALLRDIVCYYNKVNLDAFELFPI 167
Query: 175 EMAN-KGCMPDVVCYTVMITSYIAAGELEKAQD--------------------------- 206
+ + K V+ + ++I + A LE A D
Sbjct: 168 LLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEA 227
Query: 207 --------LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE-------ACTMMKEMESRGC 251
LF+ M + G PNVFTY M+ +C G F E A +++EME G
Sbjct: 228 NRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYC-KGNFGEADIDTRQATEILEEMERNGE 286
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+P + Y+T + L G + A + +R ++ +++
Sbjct: 287 SPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNV 325
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 5/289 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T T+ ++ C G+ A ++ + ++ + P Y+AI+ +L
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKM--EEISHIIPNVVIYSAIIDSLCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M ++G PD+ TYN ++ G+ +LL EM SPD T
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + +++++DG + LDA ++ F MA
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+++ + +I Y A ++ +L M G + + TYN++I GF + G +
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +++EM S G P+ + +TL+ L + GKL +A E+ + M + K
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 44/308 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + + ++ ++ + + L+ +YQ+M + DI ++ I++
Sbjct: 68 SDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSC 127
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+N LLH L D+ ALNL + M E P+V+ F
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG--------------------------------- 180
TTLM+GL R G + D M G
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEE 247
Query: 181 ---CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+P+VV Y+ +I S G AQ+LF M KG P++FTYNSMI GFC +G++
Sbjct: 248 ISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A +++EM R +P+ + YN L++ GK EA E+ M+ +G Y ++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 292 SKFKRYKR 299
F + R
Sbjct: 368 DGFCKQNR 375
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 136/285 (47%), Gaps = 7/285 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C+C ++ A + K P ++N +LH L + ++
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKITK---LGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM + P+++T+ +M R G++ + LLD M G P TY ++ + K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKI 232
Query: 129 DKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
++AL+LL M+E+ P+V+ ++ ++D L + G + F EM KG PD+
Sbjct: 233 GDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y MI + ++G A+ L M+ + P+V TYN++I F GKF EA + EM
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG PN + Y++++ +L A + M KG +L++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ G ++ + +M++ G D TYN ++ Y +G L+ LL EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-----------GFDPSVLHFTT 155
SG PD T + LL L K AL + M++ G +P V +
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ GL G + ++EM ++G +PD + Y+ MI L++A +FD M +K
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV T+ ++I G+C AG+ D+ + EM RG N + Y TL+ R G + A
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636
Query: 276 EVIRHMVEKGKYIHLVS 292
++ + M+ G Y ++
Sbjct: 637 DIFQEMISSGVYPDTIT 653
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN ++H + + Q+M G PDI+T + ++ GKL +
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 106 MGRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
M +S G PD TYNIL+ L K L A L M G P + ++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+++DGL + LD FD M +K P+VV +T +I Y AG ++ +LF M +
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G + N TY ++I GF G + A + +EM S G P+ + +++ L + +L A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 275 HEVIRHM 281
++ +
Sbjct: 671 VAMLEKL 677
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M E G T+N LI G++ A +++ I S L P + + +L L
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC---PDIVTCDTLLDGLCD 477
Query: 57 ------GIRQYKLIEWVYQQMSDE----GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ +K+++ + + G PD+ TYNI++ GK + L +EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + + M F P+V+ FTTL++G +AG +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + + + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G + A M+++++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQ 678
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M PSV+ F LM + R D + +M K D+ +T++I
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 194 SYIAAGELEKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + +L A F G ITK G P+V T+N+++ G C+ + EA + +M C
Sbjct: 123 CFCSCSKLPFALSTF-GKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + + TL++ L G++ EA ++ M+E G
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%)
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + L+ L +M RS P + L+ V+ + ++P ++L M+ +
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
FT L+ L F ++ G PDVV + ++ + +A +LF
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M PNV T+ +++ G C G+ EA ++ M G P + Y T+V + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGD 234
Query: 271 LAEAHEVIRHMVE 283
A +++R M E
Sbjct: 235 TVSALDLLRKMEE 247
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E GF L L G L+ F +M +P VV + ++ + +
Sbjct: 40 EAGFGGESLK---LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
L+ M K +++++ +I+ FC K A + ++ G +P+ + +NTL+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLL 156
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
L +++EA + M E
Sbjct: 157 HGLCVEDRVSEALNLFHQMFE 177
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 6/239 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N++L AL+ R+ + + + ++ + PD +TYN + R+ + +L +M
Sbjct: 178 FNSLLDALVKSRRASKAASLVRAL-EQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMV 236
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-----PSVLHFTTLMDGLSR 162
SG +P TYNI+L + + A + MK G + P V+ +TT++ GL
Sbjct: 237 ESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGV 296
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG LD + FDEM+ +GC P Y +I G LE A +FD M+ KG +PNV T
Sbjct: 297 AGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVT 356
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y +IRG C AGK A ++ M+S GC PN YN L+ G++ + ++ M
Sbjct: 357 YTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETM 415
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%), Gaps = 12/219 (5%)
Query: 75 GYAPDILTYNIVMCA---KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G A D+ +N ++ A R K R L++ F PD TYN L +
Sbjct: 170 GIAQDLPLFNSLLDALVKSRRASKAASLVRALEQR----FPPDAVTYNTLADGWCRVKDT 225
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-----CMPDVV 186
AL++L M E G P+ + ++ G R+G L FF +M +G C PDVV
Sbjct: 226 SRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVV 285
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ AG+L+KA+ +FD M +G P+ TYN++I+ C G ++A + +M
Sbjct: 286 SYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDM 345
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN + Y L+ L +AGK+ A +++ M +G
Sbjct: 346 VRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEG 384
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 130/294 (44%), Gaps = 47/294 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF-----NFRPFKNSYNAILHAL 55
M+E+G T T+NI++ G + + F++ K N +P SY +LH L
Sbjct: 235 MVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGL 294
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Q V+ +MS EG P TYN ++ + G L+ + D+M R G+ P+
Sbjct: 295 GVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNV 354
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY +L+ L K + A+ LL+ MK G
Sbjct: 355 VTYTVLIRGLCHAGKVVRAMKLLDRMKSEG------------------------------ 384
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ--LPNVFTYNSMIRGFCMA 233
C P+V Y V+I + GE+EK DLF+ M +KG+ LPN TYN +I +
Sbjct: 385 -----CEPNVQTYNVLIRYSLEEGEIEKGLDLFETM-SKGEECLPNQDTYNIIISAMFVR 438
Query: 234 GKFDE---ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ ++ A M+ EM RG P ++N +++ L G + E++R M EK
Sbjct: 439 KRAEDMAVAARMVVEMVDRGYLPRKFMFNRVLNGLMLTGNQELSRELLR-MQEK 491
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 7/198 (3%)
Query: 101 RLLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
RL + RS G + D +N LL L K + A +L+ + E F P + + TL DG
Sbjct: 160 RLFLSLHRSHGIAQDLPLFNSLLDALVKSRRASKAASLVRAL-EQRFPPDAVTYNTLADG 218
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ--- 216
R + +M G P Y +++ + +G+L+ A D F M +G
Sbjct: 219 WCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDE 278
Query: 217 --LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
P+V +Y +++ G +AG+ D+A + EM GC P+ YN L+ G L +A
Sbjct: 279 NCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDA 338
Query: 275 HEVIRHMVEKGKYIHLVS 292
V MV KG ++V+
Sbjct: 339 VAVFDDMVRKGYIPNVVT 356
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/292 (31%), Positives = 142/292 (48%), Gaps = 20/292 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVE----RFIKSKLFNFRPFKNSY---NA 50
M + G R+F ILI C GE+ A K+ + R IK L +F +
Sbjct: 191 MDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGK 250
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+ HA+ +R+ + G PD + Y +V+ R G + R+ DEM G
Sbjct: 251 MDHAMAYLREMRCF----------GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCG 300
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD TYN LL+ L K + L A LLN M+E G P + FTTL+ G G LD
Sbjct: 301 CLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKAL 360
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
FD M N+ PD+V Y +I G+L+KA DL+D M ++ PN TY+ +I
Sbjct: 361 QLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSH 420
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
C G+ ++A + EM ++G PN + YN+++ +G +++ + ++ M+
Sbjct: 421 CEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMM 472
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N ++ G+ K E F + F P S+ ++ + +
Sbjct: 156 MVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGE 215
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +Y++M G PD+++++ ++ R GK+D L EM G PD Y +
Sbjct: 216 IEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTM 275
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + AL + + M G P V+ + TL++GL + L + +EM +G
Sbjct: 276 VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 335
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ +T +I Y G+L+KA LFD M+ + P++ TYN++I G C G D+A
Sbjct: 336 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 395
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M SR PN + Y+ L+ + G++ +A + M+ KG
Sbjct: 396 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKG 440
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 7/279 (2%)
Query: 6 FPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T N+++ G+ A +V+ + L +P +YN++L L +
Sbjct: 127 FPDVV-THNVMVDARFRAGDAEAAMALVDSMVSKGL---KPGIVTYNSVLKGLCRSGMWD 182
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
V+++M D G APD+ ++ I++ R+G++++ ++ EM G PD +++ L+
Sbjct: 183 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLI 242
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ + K A+ L M+ G P + +T ++ G RAG + DEM GC+
Sbjct: 243 GLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCL 302
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y ++ L A+ L + M +G P++ T+ ++I G+C+ GK D+A +
Sbjct: 303 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 362
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
M ++ P+ + YNTL+ + G L +A+++ M
Sbjct: 363 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDM 401
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 119/242 (49%), Gaps = 2/242 (0%)
Query: 46 NSY--NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
N+Y N ++H ++ ++ V +M PD++T+N+++ A++R G + L+
Sbjct: 94 NTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALV 153
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D M G P TYN +L L + A + M + G P V FT L+ G R
Sbjct: 154 DSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRV 213
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G ++ + EM ++G PD+V ++ +I + G+++ A M G +P+ Y
Sbjct: 214 GEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIY 273
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+I GFC AG +A + EM GC P+ + YNTL++ L +L +A ++ M E
Sbjct: 274 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 333
Query: 284 KG 285
+G
Sbjct: 334 RG 335
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 113/239 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +L+ L R+ E + +M + G PD+ T+ ++ GKLD+ +L D M
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
PD TYN L+ + + A +L + M P+ + ++ L+D G +
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F DEM NKG +P+++ Y +I Y +G + K Q M+ P++ TYN++
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+ K +A ++ ME P+ + YN L++ G + EA + M KG
Sbjct: 487 IHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 545
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 113/220 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M ++ PDI+TYN ++ R G LD+ + L D+M P+ TY+IL+
Sbjct: 362 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 421
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A L+ M G P+++ + +++ G R+GN+ + F +M PD++
Sbjct: 422 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 481
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I YI ++ A L + M + P+V TYN +I GF + G EA + ++M
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
++G P+ Y ++++ AG EA ++ M+++GK
Sbjct: 542 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGK 581
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 104/208 (50%), Gaps = 6/208 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A + + ++F P +Y+ ++ + Q +
Sbjct: 377 TYNTLIDGMCRQGDLDKANDLWDDMHSREIF---PNHVTYSILIDSHCEKGQVEDAFGFL 433
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G P+I+TYN ++ R G + + + L +M + SPD TYN L+H K
Sbjct: 434 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 493
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK A LLN M++ P V+ + L++G S GN+ + F++M KG PD Y
Sbjct: 494 DKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 553
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQ 216
MI ++ AG ++A L D M+ +G+
Sbjct: 554 MSMINGHVTAGNSKEAFQLHDEMLQRGK 581
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A D EM + PDVV + VM+ + AG+ E A L D M++KG P +
Sbjct: 107 KALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIV 166
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYNS+++G C +G +D+A + KEM+ G P+ + L+ G++ EA ++ + M
Sbjct: 167 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 226
Query: 282 VEKGKYIHLVS 292
+G LVS
Sbjct: 227 RHRGIKPDLVS 237
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 133/263 (50%), Gaps = 3/263 (1%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
GLA V R + P S +A++ ++ +L V + G+ ++
Sbjct: 91 GLAFSVYRRMTHVDVL---PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIM 147
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
NIV+ R G + + L+ EMGR SPD +YN L++ L K K A+ LL M+
Sbjct: 148 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 207
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P+ + TTLMDGL + G +D + M KG DVV Y +I+ + G L++
Sbjct: 208 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 267
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
++LFD M+ KG NV TY+ ++ G C G++ EA T++ M G +P+ + Y L+
Sbjct: 268 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 327
Query: 264 NLRNAGKLAEAHEVIRHMVEKGK 286
L G+ A +++ MVEKG+
Sbjct: 328 GLCKDGRATHAMDLLNLMVEKGE 350
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 4/291 (1%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+N L +C G+V A K+ ++ P ++N ++ L
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE-NCLEPNVFTFNMLIGGLCK 438
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G +++TYN+++ + GK+ + L ++ GF P+ T
Sbjct: 439 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 498
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL+ K A L M+ G +P++ + TLM L + G+L+ K F EM
Sbjct: 499 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 558
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N C PD++ + MI + AG+ + ++L M+ G P+ T++++I G+ D
Sbjct: 559 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 618
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
EA + ++ M + G P+ LVY++L+ L + G E ++ M KG +
Sbjct: 619 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 669
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M +G+ D++ Y ++ G LD+ L DEM G S + TY+ L+H L
Sbjct: 236 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 295
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A +LN M E G P V+ +T L+DGL + G + M KG P V
Sbjct: 296 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 355
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+++ G + A + MI KG+ +V TYN++++G C GK DEA + M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415
Query: 247 -ESRGC-NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ C PN +N L+ L G+L +A ++ R MV+KG +LV+
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT 463
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 2/221 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +G + +++TY+ ++ RLG+ + + +L+ M G PD TY L+ L
Sbjct: 271 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 330
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A++LLN M E G +PS + + L+ GL + G + M KG DVV
Sbjct: 331 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV 390
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQL--PNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y ++ G++++A LF+ M PNVFT+N +I G C G+ +A + +
Sbjct: 391 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 450
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M +G N + YN L+ AGK+ EA E+ + +++ G
Sbjct: 451 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 491
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 22/297 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-------RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G + T+N+L+ + GL R ++E+ K+ + +YN ++
Sbjct: 345 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV-------TYNTLMK 397
Query: 54 ALLGIRQYKLIEWVYQQMSDEG--YAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGR 108
L + ++ M D P++ T+N++ +C + RL K + HR +M +
Sbjct: 398 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR---KMVK 454
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G + TYN+LL K K A+ L + ++GF P+ ++ L+DG + L+
Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 514
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
K F EM G P + Y ++ S G LE+A+ LF M P++ ++N+MI
Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 574
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G AG F + +M G P+ L ++TL++ L G+L EA + MV G
Sbjct: 575 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 37/272 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++H L + Q+K V M++ G PD++TY ++ + G+ LL+ M
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN+LL L K + A +L M E G V+ + TLM GL G +
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405
Query: 167 D-ACKYF---FD---------------------------------EMANKGCMPDVVCYT 189
D A K F FD +M KG ++V Y
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + AG++++A +L+ ++ G +PN FTY+ +I GFC + A + EM +
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G NP YNTL+++L G L +A + + M
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 557
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
+ V F + FN P + N ++ AL R Y L VY++M+ P + + ++
Sbjct: 57 EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
K ++ + + GF+ + NI+L L + A+ L+ M
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P ++ + TL++GL +A L EM GC P+ V T ++ G +++A +L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+ M KG +V Y ++I GFC G D + EM +G + N + Y+ LV L
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
G+ EA+ V+ M E G + +V+
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVT 321
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGI 58
EN TFN+LI C G + A K+ + +K N +YN +L L
Sbjct: 419 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV----TYNMLLGGCLKA 474
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K +++Q+ D G+ P+ TY+I++ ++ L+ L EM G +P Y
Sbjct: 475 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 534
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L K A +L M +P ++ F T++DG +AG+ K +M
Sbjct: 535 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 594
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PD + ++ +I GEL++A+ + M+ G P+ Y+S+++G G E
Sbjct: 595 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 654
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++ +M ++G + + +T+++ L ++ + + E++
Sbjct: 655 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 8/274 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWV 67
++NI+I C C +A VV + +K F + P + +++++ G R + I+ V
Sbjct: 47 SYNIVINCLCRCSRFVIALSVVGKMMK---FGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M + G+ PD++ YN ++ ++G ++ L D M R G D TYN L+ L
Sbjct: 104 -SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 162
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A L+ M P+V+ FT ++D + G ++EM + PDV
Sbjct: 163 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 222
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I G +++A+ + D M+TKG LP+V TYN++I GFC + + DE + +EM
Sbjct: 223 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 282
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
RG + + YNT++ AG+ A E+ M
Sbjct: 283 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 316
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 139/285 (48%), Gaps = 37/285 (12%)
Query: 38 LFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK 95
+ RP + ++ +L + + Y L+ ++ M G D+ +YNIV+ R +
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
++ +M + G+ PD T + L++ +G++ A++L++ M+E+GF P V+ + T
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGC---------------------------------- 181
++DG + G ++ FD M G
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180
Query: 182 -MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ +T +I ++ G+ +A L++ M + P+VFTYNS+I G CM G+ DEA
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ M ++GC P+ + YNTL++ + ++ E ++ R M ++G
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 285
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 144/305 (47%), Gaps = 9/305 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E GF +N +I ++GL VE F + + R +YN+++ L +
Sbjct: 106 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 165
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M P+++T+ V+ + GK + +L +EM R PD TYN
Sbjct: 166 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 225
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + A +L+ M G P V+ + TL++G ++ +D F EMA +G
Sbjct: 226 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 285
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ D + Y +I Y AG + AQ++F M ++ PN+ TY+ ++ G CM + ++A
Sbjct: 286 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 342
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
+ + M+ + YN ++ + G + +A ++ R + KG Y ++S F
Sbjct: 343 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 402
Query: 295 KRYKR 299
R ++
Sbjct: 403 CRKRQ 407
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G A T+N L+ C G A +++ + + + P ++ A++ +
Sbjct: 141 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV---MRDIVPNVITFTAVIDVFVK 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +Y++M+ PD+ TYN ++ G++D+ ++LD M G PD T
Sbjct: 198 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 257
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K + L M + G + + T++ G +AG DA + F M
Sbjct: 258 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 317
Query: 178 NKG------------CMP--------------------DVVCYTVMITSYIAAGELEKAQ 205
++ CM D+ Y ++I G +E A
Sbjct: 318 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 377
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
DLF + KG P+V +Y +MI GFC ++D++ + ++M+ G P
Sbjct: 378 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 772
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 143/285 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E ++ +I +G ++ F + + P ++Y A++ + Q
Sbjct: 313 MREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQ 372
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + +M +G +++ +N M R GK+D+ RL M + G + D TYNI
Sbjct: 373 MEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNI 432
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + L K + A +LN M E G P+V+ FT ++ + GNL + F +M KG
Sbjct: 433 LANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKG 492
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+++ Y +I +Y ++++A + MI KG LP+++TY+S+I G C+ G+ DEA
Sbjct: 493 EVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEAL 552
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G N Y +++S L G+ EA ++ M++ G
Sbjct: 553 KLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIG 597
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 147/324 (45%), Gaps = 41/324 (12%)
Query: 1 MIE-NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
M+E N F ++ ++I C GEV A+++++ + + +P +YN +L+A +
Sbjct: 206 MVESNKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIV--KPNVFTYNTLLNAYV 263
Query: 57 GIRQYK-----------------------LIEW------------VYQQMSDEGYAPDIL 81
G + K LI+W ++++M ++ D+
Sbjct: 264 GRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVY 323
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
Y+ ++ RLG + + L DEM + P+ HTY L+ + K + AA LL M
Sbjct: 324 VYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEM 383
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ G D +++ F T MDG R G +D M KG DV Y ++
Sbjct: 384 QSKGVDLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRY 443
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A+ + + M+ KG PNV T+ I +C G EA + ++ME +G PN + YNTL
Sbjct: 444 DEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTL 503
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ K+ +AH++ M+ KG
Sbjct: 504 IDAYCKKEKVKQAHKIKSEMINKG 527
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 90/184 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN + + L + +Y + + M ++G P+++T+ + + + G L + RL +M
Sbjct: 429 TYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDM 488
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G P+ TYN L+ K +K A + + M G P + +++L+ G G +
Sbjct: 489 EKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRV 548
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F+EM KG +V YT MI+ G ++A L+D M+ G +P+ + S+
Sbjct: 549 DEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSL 608
Query: 227 IRGF 230
+ F
Sbjct: 609 VGSF 612
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 98/242 (40%), Gaps = 39/242 (16%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG- 145
+C+ RL D+ R+ D + G + + +LL L + + + + M E
Sbjct: 154 VCSDNRL--FDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESNK 211
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP---------------------- 183
F+ V T ++D L R G ++ K DEM KG +
Sbjct: 212 FEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGV 271
Query: 184 --------------DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
V Y+++I Y ++G++E+A+ +F+ M K +V+ Y+SMI
Sbjct: 272 DEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISW 331
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
G A + EM R PN Y L+ + AG++ A ++ M KG ++
Sbjct: 332 SRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLN 391
Query: 290 LV 291
LV
Sbjct: 392 LV 393
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G +A T+N LI C G A +VE + + F P ++YN +++ L
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF---PTLSTYNTLMYGLCK 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + M + PDI+++N ++ R G + + L DE+ P T
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L AAL L M + G P + +T L++G + G + + FF+EM
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PD Y I + + A + + M+ G P+V TYN + C G F+
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC +++ M S G P+ + Y ++++ G L +A EV M+ KG
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 135/279 (48%), Gaps = 6/279 (2%)
Query: 9 TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T T+N LI C G + A ++ + LF P +Y +++ + +
Sbjct: 389 TVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF---PDIFTYTILVNGCFKLGYVSMAR 445
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ +M +G PD YN + + ++ + +EM +GF PD TYN+ +H L
Sbjct: 446 GFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHAL 505
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ A +LL +M G P + +T++++G + G+L + F+EM +KG P V
Sbjct: 506 CQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSV 565
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V YTV+I ++ A L+ A F M+ K NV TYN++I G CM + DEA E
Sbjct: 566 VTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDE 625
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
ME +G PN Y L++ N G EA + R M+++
Sbjct: 626 MEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDR 664
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI NG + N ++ + L K + + F +P +YN +L + +
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G P+ +TYN+++ + G+L+Q L++EM SG + +TYN
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + + A +L+ M P++ + TLM GL + + + F +M
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V + ++ Y G + +A LFD + + +P V TYN++I G CM G D A
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM +G P+ Y LV+ G ++ A M+ KG
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+ IL+ C G V +AR + L +P + +YN + +
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL---KPDRFAYNTRIVGEMK 472
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++M G+ PD++TYN+ + A + G ++ LL+ M G PD T
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A + N M G PSV+ +T L+ + LD +F +M
Sbjct: 533 YTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKML 592
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K +V+ Y +I +++A FD M KG LPN F+Y +I C G ++
Sbjct: 593 EKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWE 652
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
EA + +EM R P+ ++ + NL
Sbjct: 653 EALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ D+M R+G PD N +L VL + A N+ M++ G P+V+ + T++D
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G +D EM +GC P+ V Y V++ GELE+A+ L + M+ G + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
TYN +I GFC G F EA +++EM +R P YNTL+ L
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 3/259 (1%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
V ++ I++ L P + N IL L + VY M G P ++TYN ++
Sbjct: 167 VFDKMIRNGLL---PDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+ + G++DQ LL EM G P+ TYN+L++ L K + A L+ M G +
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
S + L++G + G +EM N+ P + Y ++ ++ + F
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRF 343
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ P++ ++NS++ G+C G EA + E++ R P + YNTL+ L
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403
Query: 269 GKLAEAHEVIRHMVEKGKY 287
G L A + + M ++G +
Sbjct: 404 GYLDAALRLKKEMTDQGLF 422
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L + + M G P V + ++ L L K + M G P VV Y M+ S
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
Y G +++A +L M +G PN TYN ++ G G+ ++A +++EM + G N +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
YN L++ G EA +++ MV + +
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 124/246 (50%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N RP + L + +QY + + QM ++ + NI++ RL +D
Sbjct: 88 NPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFS 147
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G PD T+N L++ L K A+ L N M + G +P+V+ +TT+++G
Sbjct: 148 VSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVING 207
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + GN F +M GC P+VV Y+ +I S + A + M+ +G PN
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
VFTYNS++ GFC G+ +EA + KEM R PN + + LV L G ++EA V
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327
Query: 280 HMVEKG 285
M EKG
Sbjct: 328 TMTEKG 333
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 139/287 (48%), Gaps = 7/287 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P T TF IL+ C G V AR V E + + P ++YNA++ R
Sbjct: 301 PNTV-TFTILVDGLCKEGMVSEARLVFETMTEKGV---EPDISTYNALMDGYCLQRLMNE 356
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ V++ M +G AP +YNI++ + ++D+ LL EM +PD TY+ L+
Sbjct: 357 AKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 416
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + +P ALNL M G P+++ + L+DG + G+LD M K P
Sbjct: 417 GLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEP 476
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
++V YT++I AG+LE A++LF + G P++ TY MI+G G DEA +
Sbjct: 477 NIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLF 536
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
++ME G PN YN ++ + A +I MV K ++L
Sbjct: 537 RKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNL 583
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 142/294 (48%), Gaps = 4/294 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G A TFN LI G ++ VE F + P SY +++ L
Sbjct: 154 MFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGN 213
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+++M G P+++TY+ ++ + + ++ L EM G P+ TYN
Sbjct: 214 TSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++H + A L M VG D P+ + FT L+DGL + G + + F+ M
Sbjct: 274 IVHGFCNLGQLNEATRLFKEM--VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTE 331
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD+ Y ++ Y + +A+ +F+ MI KG P +YN +I G+C + + DE
Sbjct: 332 KGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDE 391
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A +++ EM + NP+ + Y+TL+ L G+ EA + + M G + +LV+
Sbjct: 392 AKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVT 445
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 132/284 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G ++ +I + G V+ F K + +P +Y+ I+ +L R
Sbjct: 189 MVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRL 248
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+M + G P++ TYN ++ LG+L++ RL EM P+ T+ I
Sbjct: 249 VNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTI 308
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A + M E G +P + + LMDG ++ K F+ M KG
Sbjct: 309 LVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKG 368
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P Y ++I Y + +++A+ L M K P+ TY+++++G C G+ EA
Sbjct: 369 CAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEAL 428
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ KEM S G +PN + Y L+ G L EA ++++ M EK
Sbjct: 429 NLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEK 472
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 126/265 (47%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N L+ C + A+KV E I+ P +SYN +++
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGC---APGAHSYNILINGYCK 385
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + + +M + PD +TY+ +M +LG+ + L EM G P+ T
Sbjct: 386 SRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVT 445
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL K AL LL MKE +P+++H+T L++G+ AG L+ K F ++
Sbjct: 446 YVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLF 505
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD+ YTVMI + G ++A DLF M G LPN +YN MI+GF
Sbjct: 506 GDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSS 565
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
A ++ EM + + N + L+
Sbjct: 566 TAIRLIDEMVGKRFSVNLSTFQMLL 590
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 133/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+ NILI C V + V+ + K P ++NA+++ L + K ++
Sbjct: 130 SLNILINCLCRLNHVDFSVSVLGKMFK---LGIHPDAITFNALINGLCNEGKIKEAVELF 186
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M G+ P++++Y V+ + G + +M ++G P+ TY+ ++ L K
Sbjct: 187 NEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKD 246
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A+ L+ M E G P+V + +++ G G L+ F EM + MP+ V +
Sbjct: 247 RLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTF 306
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G + +A+ +F+ M KG P++ TYN+++ G+C+ +EA + + M
Sbjct: 307 TILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIR 366
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC P YN L++ + ++ EA ++ M K
Sbjct: 367 KGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKA 403
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 2/247 (0%)
Query: 41 FRPFKNSY--NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
FR N Y N +++ L + V +M G PD +T+N ++ GK+ +
Sbjct: 122 FRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L +EM + G P+ +Y +++ L K A+++ M++ G P+V+ ++T++D
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + ++ F EM +G P+V Y ++ + G+L +A LF M+ + +P
Sbjct: 242 SLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP 301
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N T+ ++ G C G EA + + M +G P+ YN L+ + EA +V
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361
Query: 279 RHMVEKG 285
M+ KG
Sbjct: 362 EIMIRKG 368
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 95/246 (38%), Gaps = 58/246 (23%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLH------------VLGKGDKPLAALNLLN------ 139
Q + EMG S F PDF + H L K + + N N
Sbjct: 18 QLQQQQMEMGISPFLPDFPCFLFFNHHHFLTSTSTKKPSLPKNNDGFVSNNSNNVCVDDA 77
Query: 140 -----HMKEVGFDPSVLHF-----------------------------------TTLMDG 159
M + PSV+ F L++
Sbjct: 78 LASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINC 137
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R ++D +M G PD + + +I G++++A +LF+ M+ +G PN
Sbjct: 138 LCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPN 197
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V +Y ++I G C G A + K+ME GC PN + Y+T++ +L + +A E +
Sbjct: 198 VISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLS 257
Query: 280 HMVEKG 285
MVE+G
Sbjct: 258 EMVERG 263
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+ C G + A K+++ + KL P Y ++ + + ++ + ++
Sbjct: 445 TYVILLDGFCKHGHLDEALKLLKSMKEKKL---EPNIVHYTILIEGMFIAGKLEVAKELF 501
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++ +G PDI TY +++ + G D+ + L +M GF P+ +YN+++ +
Sbjct: 502 SKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 561
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
A+ L++ M F ++ F L+D
Sbjct: 562 QDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 145/287 (50%), Gaps = 19/287 (6%)
Query: 27 RKVVERFIKSKLFN--FRPFKNS-----------YNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E +K K F + ++ S +N ++H+ + + +L + V+ ++
Sbjct: 105 RKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P ++++N +M +LG LD+ RL + M SG PD +TY++L++ L K K
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMED 224
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M G P+ + FTTL+DG + G +D + +M ++ PD++ Y +I
Sbjct: 225 ANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L++AQDL D M KG P+ TY ++I G C G + A K M
Sbjct: 285 GLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRL 344
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLVSKF 294
+ + Y L+S L G+ +A +++R M+ E G Y ++++F
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K++ + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q L DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G P++
Sbjct: 323 KEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G +P+V T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
[Vitis vinifera]
Length = 811
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 153/304 (50%), Gaps = 9/304 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
+ ++GF + +I G R+ V F K + +P +YN IL + +G+
Sbjct: 191 LCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGM 250
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
K++ V +M G APD TYN ++ R ++ +L EM +GFSPD TY
Sbjct: 251 PWNKMVGLV-DRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTY 309
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N LL V GK + A+ +L M+ G PS++ + +L+ +R G L+ ++M
Sbjct: 310 NALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVE 369
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PDV YT +++ + AG+ + A +F+ M +G PN+ T+N++I+ GKF E
Sbjct: 370 KGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTE 429
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVS 292
+ +++++ C+P+ + +NTL+S G +E V + M E+ + L+S
Sbjct: 430 MMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLIS 489
Query: 293 KFKR 296
+ R
Sbjct: 490 SYSR 493
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 125/281 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G + T+N LI C L + + KL F P K +YNA+L R+
Sbjct: 262 MKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRR 321
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V Q+M G P I+TYN ++ A R G L+ L ++M G PD TY
Sbjct: 322 SKEAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTT 381
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL K K AA+ + M+ G P++ F L+ G F+++
Sbjct: 382 LLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQ 441
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+V + +++ + G + +F M G +P T+N++I + G FD+A
Sbjct: 442 CSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAM 501
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ K M G NP+ YN +++ L G ++ +V+ M
Sbjct: 502 AVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEM 542
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G T T+N+++ G++G+ K+V + K P +YN ++
Sbjct: 226 MEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRRGN 285
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Y+ V ++M G++PD +TYN ++ + + + +L EM +G P TYN
Sbjct: 286 LYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYN 345
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ + AL L N M E G P V +TTL+ G +AG A F+EM N+
Sbjct: 346 SLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNE 405
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ + +I + G+ + +F+ + T P++ T+N+++ F G E
Sbjct: 406 GCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEV 465
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G P +NTL+S+ G +A V + M+E G
Sbjct: 466 SGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAG 511
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 129/301 (42%), Gaps = 43/301 (14%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF TFN LI + CG A V +R +++ + P +SYNA+L AL
Sbjct: 472 MKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGV---NPDLSSYNAVLAALAR 528
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK---------------------- 95
+K E V +M D P+ LTY ++ A Y GK
Sbjct: 529 GGLWKQSEKVLAEMKDGRCKPNELTYCSLLHA-YANGKEIERMCALAEEIYSGIIEPRAV 587
Query: 96 --------------LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
L + R E+ + GFSPD T N ++ + G+ A +L+ M
Sbjct: 588 LLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCM 647
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
K GF PS+ + +LM SR+ N + + E+ KG PD++ Y +I +Y G +
Sbjct: 648 KRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRM 707
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
A + M G P++ TYN+ I + F EA ++ M GC PN YN++
Sbjct: 708 RDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSI 767
Query: 262 V 262
V
Sbjct: 768 V 768
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 4 NGFPTTARTFNILICTCGEVGL-------ARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
NG P + T+N LI GL ++VE+ IK +F +Y +L
Sbjct: 335 NGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVF-------TYTTLLSGFE 387
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ K ++++M +EG P+I T+N ++ GK + ++ +++ SPD
Sbjct: 388 KAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIV 447
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+N LL V G+ + MK GF P F TL+ SR G+ D + M
Sbjct: 448 TWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRM 507
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G PD+ Y ++ + G ++++ + M PN TY S++ + +
Sbjct: 508 LEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEI 567
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLV 262
+ C + +E+ S P ++ TLV
Sbjct: 568 ERMCALAEEIYSGIIEPRAVLLKTLV 593
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 135/316 (42%), Gaps = 35/316 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI G G ++++ F K F P ++N +L + V+++M
Sbjct: 413 TFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEM 472
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G+ P+ T+N ++ + R G DQ + M +G +PD +YN +L L +G
Sbjct: 473 KRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLW 532
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD------------------------ 167
+ +L MK+ P+ L + +L+ + ++
Sbjct: 533 KQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTL 592
Query: 168 -----------ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ F E+ +G PD+ M++ Y + KA ++ D M G
Sbjct: 593 VLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGF 652
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ TYNS++ + + F+ + +++E+ ++G P+ + YNT++ G++ +A
Sbjct: 653 TPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASR 712
Query: 277 VIRHMVEKGKYIHLVS 292
V+ M E G +++
Sbjct: 713 VLSEMRESGPAPDIIT 728
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 14/245 (5%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK---LDQFHRLLDEMGRSGFSPDFHTY 118
++ EWV + E +L +I+ LGK + LL + + GF D + Y
Sbjct: 148 RVFEWVRNRKESEL----LLNGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAY 203
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG-NLDACKYFFDEMA 177
++ + A+ + M+EVG P+++ + +++ + G + D M
Sbjct: 204 TSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMK 263
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD Y +I+ E+A + M G P+ TYN+++ + + +
Sbjct: 264 SAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSK 323
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
EA +++EME GC P+ + YN+L+S G L +A E+ MVEKG Y L+
Sbjct: 324 EAMEVLQEMEGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLL 383
Query: 292 SKFKR 296
S F++
Sbjct: 384 SGFEK 388
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ LI C G+ A ++ + I+ K+F P Y ++ L G
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF---PTVVIYTILIRGLCG 240
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E +++ M + G P++ TYN +M ++ + + L EM G P+ T
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ IL+ L K D+ ++A L M G P++ + L+DG +AGNL E+
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+PDV Y+++I +E+A L M KG LPN TYN++I G+C G +
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + +M +G PN + ++TL+ AGK+ A + MV KG
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 3/277 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T F +LI E+GL + + + K + P + N +L L+ ++ + VY
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVY 181
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M G +P+++TY ++ R G + RL DEM P Y IL+ L
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A ++ M+ G P++ + T+MDG + ++ + EM G +P+VV +
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I E+ A+ M + G +PN+F YN +I G+C AG EA ++ E+E
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y+ L+ L ++ EA +++ M +KG
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M+ G P+I YN ++ + G L + L E+ + PD TY+IL+ L D+
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A LL MK+ GF P+ + + TL+DG + GN++ +M KG P+++ ++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I Y AG++E A L+ M+ KG LP+V Y ++I G G EA + KEM+ G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEA 274
+PN + L+ L G++++A
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDA 527
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 6/242 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G TF ILI C E+ ARK + I F P YN ++
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFL---IDMASFGVVPNIFVYNCLIDGYCK 345
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ PD+ TY+I++ + ++++ LL EM + GF P+ T
Sbjct: 346 AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVT 405
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K A+ + + M E G +P+++ F+TL+DG +AG ++A + EM
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMV 465
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG +PDVV YT +I + G ++A L M G PNVFT + +I G C G+
Sbjct: 466 IKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRIS 525
Query: 238 EA 239
+A
Sbjct: 526 DA 527
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P++ ++DGL + G D + +M +G P+VV Y +I G+ KA L
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
FD MI K P V Y +IRG C + EA +M + M + G PN YNT++
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +A E+ + M+ G ++V+
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVT 300
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+N LI C G + A + K ++ P +Y+ ++ L G+ + + + +
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEIL---PDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+M +G+ P+ +TYN ++ + G +++ + +M G P+ T++ L+ K
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K AA+ L M G P V+ +T L+DG + GN EM G P+V
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 189 TVMITSYIAAGELEKAQDLF 208
+ +I G + A LF
Sbjct: 512 SCLIDGLCKDGRISDAIKLF 531
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
GF+P + T+L+ S GN+ FDE+ +K +++ +T +I++Y+ KA
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK----NLISWTSVISAYVDNQRPNKA 716
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
LF M P++ T + G D + + RG + + + N+L++
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776
Query: 265 LRNAGKLAEAH 275
G++ A
Sbjct: 777 YSKCGEIGTAR 787
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 95/224 (42%), Gaps = 21/224 (9%)
Query: 38 LFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK 95
+F+ P KN S+ +++ A + ++ +++QM + PDI+T + + A LG
Sbjct: 688 MFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGA 747
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK----GDKPLAALNLLNHMKEVGFDPSVL 151
LD + + G D N L+++ K G +L L N + +G +
Sbjct: 748 LDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACS 807
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
H + +G ++ +++ GCM D++C AG L +A + M
Sbjct: 808 HAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLC---------RAGLLTEAYEFILKM 858
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR---GCN 252
+ PN + +++ + G +D+ + +++ R GC+
Sbjct: 859 PVR---PNAVVWRTLLGACSLQGMWDKKMLVRNQIKQRRDPGCS 899
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LI VG + +E + + F+P +Y ++H + E + QM
Sbjct: 526 YNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQML 585
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ G P+ Y ++ ++ L++ L M G PD Y I++H L
Sbjct: 586 NSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQ 645
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AA+++L+ +++ G P L + +L+ G +A +++ DEMA KG P + CY +I
Sbjct: 646 AAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALI 705
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + ++ A+++F+ +I KG PN TY ++I G+C AG +A + EM + G
Sbjct: 706 DGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVA 765
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
P+ VY+ L + N+G L +A + M+ +G I +S F
Sbjct: 766 PDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI--ISSF 805
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI G + + + + P +Y AI++ L +
Sbjct: 269 MRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGR 328
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +MS G P+++ Y+ ++ R G D+ +++ EM +G P+ TY+
Sbjct: 329 PDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDN 388
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A +L M ++G+ + + +++G R N + +EM G
Sbjct: 389 LIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGG 448
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V Y+++I GE E+A L + MI G PN F Y +I G+C G F AC
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLAC 508
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+K+M P+ YN+L+ L N GK+ EA E M+EKG
Sbjct: 509 ETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKG 553
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 125/244 (51%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P K +Y+ ++ L + + + +QM+ GY D +TYN+V+ R ++
Sbjct: 380 QPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFL 439
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL+EM + G SP+ +TY+I+++ L + + A LL M G P+ + L+ G
Sbjct: 440 LLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYC 499
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G+ +M + PD+ CY +I G++++A + +D M+ KG PN F
Sbjct: 500 REGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDF 559
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +I G+ MAG ++A ++ +M + G NPN +Y ++ + L + ++ M
Sbjct: 560 TYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSM 619
Query: 282 VEKG 285
+EKG
Sbjct: 620 LEKG 623
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 114/242 (47%), Gaps = 1/242 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P Y ++H L + V + G PD L Y ++ + +++ L
Sbjct: 626 PDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGL 685
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LDEM + G P YN L+ K D A N+ N + G P+ + +TTL+DG +
Sbjct: 686 LDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCK 745
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG++ ++EM +G PD Y+V+ +G+L++A + + MI +G + +
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG-YAIISS 804
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N+++ GFC GK E + M + P+ L +V L AGKL+EAH + +
Sbjct: 805 FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQ 864
Query: 283 EK 284
+K
Sbjct: 865 QK 866
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 122/262 (46%), Gaps = 6/262 (2%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +Y+ ++ A +R + + V ++M + G + +++TYN ++ R G +++
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
EM G PD TY +++ L K +P A LL+ M G P+V+ ++TL+DG
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R GN D EM+ G P+ + Y +I G + +A + M G + +
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN +I G +EA ++ EM G +PN Y+ +++ L G+ A ++
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478
Query: 281 MVEKG------KYIHLVSKFKR 296
M+ G Y L+S + R
Sbjct: 479 MIADGLKPNAFVYAPLISGYCR 500
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI +G A + LI C G LA + +++ + N P YN+++ L
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRE---NLTPDLYCYNSLIIGLSN 535
Query: 58 I-RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + + IE+ Y +M ++G+ P+ TY ++ G L++ +LL +M SG +P+
Sbjct: 536 VGKMDEAIEY-YDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDF 594
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y +L K D + L M E G P + ++ LS +G++ A +
Sbjct: 595 IYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI 654
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G +PD + Y +I+ + A ++EKA L D M KG P + YN++I GFC +
Sbjct: 655 EKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDI 714
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + + +G PN + Y TL+ AG + +A ++ M+ +G
Sbjct: 715 SHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEG 763
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 109/215 (50%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G AP + N ++ R LD ++ M +G SPD +TY+ L+ K
Sbjct: 199 MKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRD 258
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+A ++ M+E G +V+ + TL+ GL RAG ++ + EM + G +PD Y
Sbjct: 259 LESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGA 318
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I G ++A+ L D M G +PNV Y+++I GF G DEA ++KEM + G
Sbjct: 319 IINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAG 378
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + Y+ L+ L G++ A +++ M + G
Sbjct: 379 VQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++L+ T + G R E + K P N +L LL L+ V M
Sbjct: 175 VLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFM 234
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +PD+ TY+ ++ A ++ L+ ++++EM +G S + TYN L+ L +
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A M++ G P + +++GL + G D K DEM+ G MP+VV Y+ +
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I ++ G ++A + M G PN TY+++IRG C G+ A ++K+M G
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414
Query: 252 NPNFLVYNTLV-SNLRNAGKLAEAHEVIRHMVEKG 285
+ + YN ++ +LR K EA ++ M + G
Sbjct: 415 MADTMTYNLVIEGHLRQHNK-EEAFLLLNEMRKGG 448
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +Y+ I++ L I + + + +QM +G P+ Y ++ R G
Sbjct: 449 ISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLAC 508
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +M R +PD + YN L+ L K A+ + M E GF P+ + L+ G
Sbjct: 509 ETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGY 568
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
S AGNL+ + +M N G P+ Y ++ Y + LEK M+ KG +P+
Sbjct: 569 SMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDN 628
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
Y +I +G A +++ +E G P+ L+Y +L+S A + +A ++
Sbjct: 629 RLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDE 688
Query: 281 MVEKG 285
M +KG
Sbjct: 689 MAKKG 693
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 28/239 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G +N LI C ++ AR + I L P +Y ++
Sbjct: 689 MAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGL---PPNCVTYTTLIDGYCK 745
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M EG APD Y+++ G L Q + +EM G++ +
Sbjct: 746 AGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAI-ISS 804
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL----------- 166
+N L+H K K + L+ M + PS+L ++ GL AG L
Sbjct: 805 FNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQ 864
Query: 167 ---------DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
D F +M N+G +P V + MI S+ G L+KA L D ++ KG+
Sbjct: 865 QKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGYLDKALMLHDALVAKGR 922
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 147/290 (50%), Gaps = 14/290 (4%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-PD 79
G+ + K + F + K +P ++YN+++ L+ ++ I +Y +M +EG PD
Sbjct: 142 GKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPD 201
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK-GDKPLAALNLL 138
+TY++++ A +LG+ D RL DEM +G P Y LL + K GD+ AL L+
Sbjct: 202 TMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDE--KALGLV 259
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
MK+ G P+V +T L+ GL ++G ++ F M GC PDVV +I + A
Sbjct: 260 QEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKA 319
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKEMESRGCNPNFLV 257
G LE A LFD M + PNV TYN++I+ F EA + ++M++ G P+
Sbjct: 320 GRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFT 379
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG---------KYIHLVSKFKRYK 298
Y+ L+ ++ +A ++ M EKG I+ + K KRY+
Sbjct: 380 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYE 429
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 4/294 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G N LI G+ G ++ F + + P +YN ++ AL +
Sbjct: 297 MLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKA 356
Query: 61 --YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ W +++M G P TY+I++ + ++++ LL+EM GF P Y
Sbjct: 357 PASEAASW-FEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAY 415
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L++ LGK + AA L +KE S + ++ L + G F+EM
Sbjct: 416 CSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKK 475
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC PDV Y +++ + AG +E+A M G P++ ++N ++ G G+ ++
Sbjct: 476 IGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQ 535
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG-KYIHLV 291
A M +M+ P+ + YNT++ +L +G EA +++R M +G +Y H+
Sbjct: 536 ATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHIT 589
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG + NI++ G + E F+K K +P SYN IL +L
Sbjct: 508 MEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGM 567
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
++ + ++M G+ D +TY+ ++ A +GK+D+
Sbjct: 568 FEEAAKLMREMGSRGFEYDHITYSSILEA---VGKVDE 602
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G +A T+N LI C G A +VE + + F P ++YN +++ L
Sbjct: 276 MLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF---PTLSTYNTLMYGLCK 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + M + PDI+++N ++ R G + + L DE+ P T
Sbjct: 333 WVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVIT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L AAL L M + G P + +T L++G + G + + FF+EM
Sbjct: 393 YNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PD Y I + + A + + M+ G P+V TYN + C G F+
Sbjct: 453 SKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFE 512
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC +++ M S G P+ + Y ++++ G L +A EV M+ KG
Sbjct: 513 EACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKG 560
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/319 (28%), Positives = 147/319 (46%), Gaps = 35/319 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++ F +FN L+ G + F + K + P +YN ++H L
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-----------------KLDQF---- 99
+ ++M+D+G PDI TY I++ ++LG K D+F
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465
Query: 100 --------------HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
+ +EM +GF PD TYN+ +H L + A +LL +M G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P + +T++++G + G+L + F+EM +KG P VV YTV+I ++ A L+ A
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
F M+ K NV TYN++I G CM + DEA EME +G PN Y L++
Sbjct: 586 MYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINES 645
Query: 266 RNAGKLAEAHEVIRHMVEK 284
N G EA + R M+++
Sbjct: 646 CNMGYWEEALRLYREMLDR 664
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI NG + N ++ + L K + + F +P +YN +L + +
Sbjct: 171 MIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGR 230
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G P+ +TYN+++ + G+L+Q L++EM SG + +TYN
Sbjct: 231 VDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNP 290
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + + A +L+ M P++ + TLM GL + + + F +M
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V + ++ Y G + +A LFD + + +P V TYN++I G CM G D A
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM +G P+ Y LV+ G ++ A M+ KG
Sbjct: 411 RLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKG 455
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 121/268 (45%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+ IL+ C G V +AR + L +P + +YN + +
Sbjct: 416 MTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL---KPDRFAYNTRIVGEMK 472
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++M G+ PD++TYN+ + A + G ++ LL+ M G PD T
Sbjct: 473 IADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVT 532
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A + N M G PSV+ +T L+ + LD +F +M
Sbjct: 533 YTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKML 592
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K +V+ Y +I +++A FD M KG LPN F+Y +I C G ++
Sbjct: 593 EKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWE 652
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
EA + +EM R P+ ++ + NL
Sbjct: 653 EALRLYREMLDRKIQPDSFTHSVFLKNL 680
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 87/164 (53%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ D+M R+G PD N +L VL + A N+ M++ G P+V+ + T++D
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G +D EM +GC P+ V Y V++ GELE+A+ L + M+ G + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
TYN +I GFC G F EA +++EM +R P YNTL+ L
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGL 330
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 104/221 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
VY M G P ++TYN ++ + + G++DQ LL EM G P+ TYN+L++ L
Sbjct: 202 VYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLS 261
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A L+ M G + S + L++G + G +EM N+ P +
Sbjct: 262 KKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLS 321
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ ++ + F M+ P++ ++NS++ G+C G EA + E+
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ R P + YNTL+ L G L A + + M ++G +
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLF 422
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%)
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L + + M G P V + ++ L L K + M G P VV Y M+ S
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
Y G +++A +L M +G PN TYN ++ G G+ ++A +++EM + G N +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
YN L++ G EA +++ MV + +
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TF++LI + G+A K VE F K K F +P +YN+ILH ++ + L VY QM
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 72 -----------------------------------SDEGYAPDILTYNIVMCAKYRLGKL 96
+ +G P+ + Y I++ + +
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D HRLL+ M SG PD T N LL K + A LL ++ G+ + +++L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+DGL RA D + + +M G PDVV YT++I + G ++ A ++ + M +G
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ + YN++I+GFC G D+A ++ E+ C P Y L+ + G L EA +
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQ 432
Query: 277 VIRHMVEKG 285
+ M G
Sbjct: 433 IFNQMENLG 441
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 1/257 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P + I++ + V K+ P + NA+L + Q
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ Q EGY I Y+ ++ +R + D+ +M ++G PD Y I
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTI 346
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + ALN+LN M + G P + L+ G G LD + E++
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P YT++I G L++A+ +F+ M G P++ T+N++I G C AG+ +EA
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466
Query: 241 TMMKEMESRGCNPNFLV 257
+ +ME G NP+ +
Sbjct: 467 HLFYKMEI-GKNPSLFL 482
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 118/242 (48%), Gaps = 23/242 (9%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y++++ L ++Y ++ ++M G PD++ Y I++ +G +D +L++M
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-------PSVLHFTTLMDGL 160
+ G SPD + YN L+ K + LL+ + + + P+ +T L+ G+
Sbjct: 369 QRGLSPDTYCYNALI-------KGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGM 421
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G LD + F++M N GC P ++ + +I AGELE+A+ LF M G+ P++
Sbjct: 422 CRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-EIGKNPSL 480
Query: 221 FTYNSM--------IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
F S GF + ++A ++ +M GC P+ VY L++ GKL+
Sbjct: 481 FLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLS 540
Query: 273 EA 274
A
Sbjct: 541 VA 542
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ W ++ S + +T+N+V+ + D + ++L+E+ S T+++
Sbjct: 81 FRFFIWTTRRRSFRSW----VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSV 136
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDP------SVLH---------------------- 152
L+ K A+ MK+ G P S+LH
Sbjct: 137 LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN 196
Query: 153 -------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F L++GL + G D FDEM KG P+ + YT++++ A +
Sbjct: 197 YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVH 256
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L + M G P+ T N+++ GFC G+ DEA +++ E G Y++L+ L
Sbjct: 257 RLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
A + E E R M + G
Sbjct: 317 FRAKRYDEVQEWCRKMFKAG 336
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 114/327 (34%), Gaps = 43/327 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G + ILI EVG+ + P YNA++ +
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++S P TY I++C R G LD+ ++ ++M G SP T+N
Sbjct: 392 LDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVL--------HFTTLMDGLSRAGNLDACKYF 172
L+ L K + A +L M E+G +PS+ +G R +
Sbjct: 452 LIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRV 510
Query: 173 FDEMANKGCMPDVVCYTVMIT----------------------------------SYIAA 198
D+M GC P Y ++T +
Sbjct: 511 LDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEK 570
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
GELEKA M K + Y + G C A + +EA + ++ + N
Sbjct: 571 GELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSC 630
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
L++ L G L A ++ + +EKG
Sbjct: 631 VMLINGLCKDGNLEMAVDIFLYTLEKG 657
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 106/283 (37%), Gaps = 14/283 (4%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALLGIRQ 60
G + TFN LI C GE+ AR + + I F + ++ G +
Sbjct: 441 GCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHR 500
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
E V QM G P Y +M R GKL L + RS S + T
Sbjct: 501 VDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDET 560
Query: 118 YNILLHVLGKGDKPLAALNLLN-HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ KG+ A LL + K F+ + +T + GL +A + F +
Sbjct: 561 LKLAEEHFEKGELEKAVRCLLEMNFKLNNFE--IAPYTIWLIGLCQARRSEEALKIF--L 616
Query: 177 ANKGCMPDV--VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
K C DV ++I G LE A D+F + KG + N ++R +
Sbjct: 617 VLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQD 676
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
K A ++ M S G + + +++ + S L + K E V
Sbjct: 677 KMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQEMENV 719
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 145/293 (49%), Gaps = 15/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E GF T+ ++ C G+ LA RK+ ER IK Y+ I+
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK-------YSIIID 271
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L ++ +M +G+ DI+TYN ++ G+ D +LL +M + SP
Sbjct: 272 GLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+++L+ K K A LL M + G P+ + + +L+DG + L+
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC PD++ + ++I Y A ++ +LF M +G + N TYN++++GFC +
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
GK + A + +EM SR P+ + Y L+ L + G+L +A E+ +EK K
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK-IEKSK 503
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 143/289 (49%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-L 56
M G + T +I+I C C ++ A + + +K + P +N +L+ L L
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK---LGYEPDTVIFNTLLNGLCL 170
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R + +E V +M + G+ P ++T N ++ GK+ L+D M +GF P+
Sbjct: 171 ECRVSEALELV-DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEV 229
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY +L+V+ K + A+ LL M+E + ++ ++DGL + G+LD F+EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
KG D++ Y +I + AG + L MI + PNV T++ +I F GK
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++KEM RG PN + YN+L+ +L EA +++ M+ KG
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 8/285 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF T+N LI C G K++ IK K+ P +++ ++ + + +
Sbjct: 293 GFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI---SPNVVTFSVLIDSFVKEGKL 349
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + + ++M G AP+ +TYN ++ + +L++ +++D M G PD T+NIL
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K ++ L L M G + + + TL+ G ++G L+ K F EM ++
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP-NVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +++ GELEKA ++F G I K ++ ++ Y +I G C A K D+A
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIF-GKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +G + YN ++S L L++A + R M E+G
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 5/269 (1%)
Query: 19 TCGEVGL-ARKVVERFIKSKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEG 75
+ G VG+ A V+ F + RP +N + A+ +QY+L+ + +QM +G
Sbjct: 61 SSGLVGIKADDAVDLF--RDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
A I T +I++ R KL + ++ + G+ PD +N LL+ L + AL
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L++ M E+G P+++ TL++GL G + D M G P+ V Y ++
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G+ A +L M + + Y+ +I G C G D A + EME +G +
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ YNTL+ NAG+ + +++R M+++
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKR 327
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ TF++LI + + G R+ + + P +YN+++ +
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M +G PDI+T+NI++ + ++D L EM G + TYN
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + K A L M P ++ + L+DGL G L+ F ++
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D+ Y ++I A +++ A DLF + KG + YN MI C +A
Sbjct: 504 MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKAD 563
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M G P+ L YN L+ A E+I M G
Sbjct: 564 ILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSG 608
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G TFNILI + +E F + L +YN ++ +
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + ++Q+M PDI++Y I++ G+L++ + ++ +S D Y I
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMI 513
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H + K A +L + G + ++ L R +L F +M +G
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEG 573
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD + Y ++I +++ + A +L + M + G +V T M+ +G+ D++
Sbjct: 574 HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVK-MVINMLSSGELDKS 631
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ L + ++++M++EG+APD LTYNI++ A L++EM
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEM 604
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
SGF D T +++++L G+ + L++L+ +
Sbjct: 605 KSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 42/182 (23%)
Query: 148 PSVLHFTTLMDGLSRAGN--LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P +L TL L N L C+ F +++ + Y ++S + + + A
Sbjct: 19 PRLLETGTLRIALINCPNELLFCCERGFSTFSDRN-----LSYRDKLSSGLVGIKADDAV 73
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC-------------- 251
DLF MI LP V +N + +++ + K+MES+G
Sbjct: 74 DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 252 ---------------------NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
P+ +++NTL++ L +++EA E++ MVE G L
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 291 VS 292
++
Sbjct: 194 IT 195
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 201 ASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 260
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 261 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLI 320
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 321 DGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLX 380
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 381 PDAGTYTMIINEF 393
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 119/284 (41%), Gaps = 41/284 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 185
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM----------- 106
+ + M G PD+ TY++++ + K+D + L DEM
Sbjct: 186 LGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVT 245
Query: 107 -----------GRSGFS-------------PDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GR + PD TYN L++ L K A +L++ M
Sbjct: 246 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 305
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P +TTL+DG + G+LD M + D V YT +I+ G
Sbjct: 306 XKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSV 365
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
A+ + M++ G P+ TY +I FC G + ++KEM
Sbjct: 366 DAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 136 bits (343), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 137/274 (50%), Gaps = 8/274 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWV 67
++NI+I C C +A VV + +K F + P + +++++ G R + I+ V
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMK---FGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M + G+ PD++ YN ++ ++G ++ L D M R G D TYN L+ L
Sbjct: 163 -SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A L+ M P+V+ FT ++D + G ++EM + PDV
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I G +++A+ + D M+TKG LP+V TYN++I GFC + + DE + +EM
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
RG + + YNT++ AG+ A E+ M
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 140/286 (48%), Gaps = 37/286 (12%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
K+ RP + ++ +L + + Y L+ ++ M G D+ +YNIV+ R
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+ ++ +M + G+ PD T + L++ +G++ A++L++ M+E+GF P V+ +
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGC--------------------------------- 181
T++DG + G ++ FD M G
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 182 --MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+P+V+ +T +I ++ G+ +A L++ M + P+VFTYNS+I G CM G+ DEA
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ M ++GC P+ + YNTL++ + ++ E ++ R M ++G
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 144/305 (47%), Gaps = 9/305 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E GF +N +I ++GL VE F + + R +YN+++ L +
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M P+++T+ V+ + GK + +L +EM R PD TYN
Sbjct: 225 WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNS 284
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + A +L+ M G P V+ + TL++G ++ +D F EMA +G
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ D + Y +I Y AG + AQ++F M ++ PN+ TY+ ++ G CM + ++A
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKAL 401
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
+ + M+ + YN ++ + G + +A ++ R + KG Y ++S F
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGF 461
Query: 295 KRYKR 299
R ++
Sbjct: 462 CRKRQ 466
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 38/288 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G A T+N L+ C G A +++ + + + P ++ A++ +
Sbjct: 200 MERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV---MRDIVPNVITFTAVIDVFVK 256
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +Y++M+ PD+ TYN ++ G++D+ ++LD M G PD T
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K + L M + G + + T++ G +AG DA + F M
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMD 376
Query: 178 NKG------------CMP--------------------DVVCYTVMITSYIAAGELEKAQ 205
++ CM D+ Y ++I G +E A
Sbjct: 377 SRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
DLF + KG P+V +Y +MI GFC ++D++ + ++M+ G P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 141/309 (45%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TF++LI + G+A K VE F K K F +P +YN+ILH ++ + L VY QM
Sbjct: 133 TFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQM 192
Query: 72 -----------------------------------SDEGYAPDILTYNIVMCAKYRLGKL 96
+ +G P+ + Y I++ + +
Sbjct: 193 LKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRT 252
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D HRLL+ M SG PD T N LL K + A LL ++ G+ + +++L
Sbjct: 253 DDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSL 312
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+DGL RA D + + +M G PDVV YT++I + G ++ A ++ + M +G
Sbjct: 313 IDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGL 372
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ + YN++I+GFC G D+A ++ E+ C P Y L+ + G L EA +
Sbjct: 373 SPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQ 432
Query: 277 VIRHMVEKG 285
+ M G
Sbjct: 433 IFNQMENLG 441
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 130/293 (44%), Gaps = 62/293 (21%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y++++ L ++Y ++ ++M G PD++ Y I++ +G +D +L++M
Sbjct: 309 YSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMT 368
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-------PSVLHFTTLMDGL 160
+ G SPD + YN L+ K + LL+ + + + P+ +T L+ G+
Sbjct: 369 QRGLSPDTYCYNALI-------KGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGM 421
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF------------ 208
R G LD + F++M N GC P ++ + +I AGELE+A+ LF
Sbjct: 422 CRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLF 481
Query: 209 -------------------------DGMITK-----------GQLPNVFTYNSMIRGFCM 232
G+I K G +P++ TYN +I GFC
Sbjct: 482 LRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCK 541
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + A + +E++ +G +P+ + Y TL+ + +A V+ MV+ G
Sbjct: 542 AKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNG 594
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 15/299 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P + I++ + V K+ P + NA+L + Q
Sbjct: 227 MTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQ 286
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ Q EGY I Y+ ++ +R + D+ +M ++G PD Y I
Sbjct: 287 IDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTI 346
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + ALN+LN M + G P + L+ G G LD + E++
Sbjct: 347 LIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKND 406
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P YT++I G L++A+ +F+ M G P++ T+N++I G C AG+ +EA
Sbjct: 407 CFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466
Query: 241 TMMKEMESRGCNPNFLV--------------YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +ME G NP+ + T+V L +G + +A++++ + + G
Sbjct: 467 HLFYKMEI-GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSG 524
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 15/288 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G + ILI EVG+ + P YNA++ +
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++S P TY I++C R G LD+ ++ ++M G SP T+N
Sbjct: 392 LDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVL--------------HFTTLMDGLSRAGNL 166
L+ L K + A +L M E+G +PS+ T+++ L +G +
Sbjct: 452 LIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
++A+ G +PD++ Y V+I + A + A LF + KG P+ TY ++
Sbjct: 511 LKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
I GF + ++A ++ +M GC P+ VY L++ GKL+ A
Sbjct: 571 IDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVA 618
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ W ++ S + +T+N+V+ + D + ++L+E+ S T+++
Sbjct: 81 FRFFIWTTRRRSFRSW----VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSV 136
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDP------SVLH---------------------- 152
L+ K A+ MK+ G P S+LH
Sbjct: 137 LIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLN 196
Query: 153 -------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F L++GL + G D FDEM KG P+ + YT++++ A +
Sbjct: 197 YNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVH 256
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L + M G P+ T N+++ GFC G+ DEA +++ E G Y++L+ L
Sbjct: 257 RLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGL 316
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
A + E E R M + G
Sbjct: 317 FRAKRYDEVQEWCRKMFKAG 336
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 122/328 (37%), Gaps = 50/328 (15%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FPT+ T+ ILIC GL + + F + + P ++NA++ L + +
Sbjct: 408 FPTSC-TYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEAR 466
Query: 66 WVYQQMSDEGYAP--------------DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
++ +M + G P D + ++ G + + ++LL ++ SG
Sbjct: 467 HLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGV 525
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD TYN+L++ K A L ++ G P + + TL+DG R +
Sbjct: 526 VPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFR 585
Query: 172 FFDEMANKGCMPDVVCYTVMIT----------------------------------SYIA 197
D+M GC P Y ++T +
Sbjct: 586 VLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFE 645
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GELEKA M K + Y + G C A + +EA + ++ + N
Sbjct: 646 KGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPS 705
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
L++ L G L A ++ + +EKG
Sbjct: 706 CVMLINGLCKDGNLEMAVDIFLYTLEKG 733
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 110/283 (38%), Gaps = 13/283 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+ ++G T+N+LI C + A K+ F + +L P +Y ++
Sbjct: 520 LADSGVVPDIMTYNVLINGFCKAKNINGAFKL---FRELQLKGHSPDSVTYGTLIDGFHR 576
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + V QM G P Y +M R GKL L + RS S + T
Sbjct: 577 VDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDET 636
Query: 118 YNILLHVLGKGDKPLAALNLLN-HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ KG+ A LL + K F+ + +T + GL +A + F +
Sbjct: 637 LKLAEEHFEKGELEKAVRCLLEMNFKLNNFE--IAPYTIWLIGLCQARRSEEALKIF--L 692
Query: 177 ANKGCMPDV--VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
K C DV ++I G LE A D+F + KG + N ++R +
Sbjct: 693 VLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQD 752
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
K A ++ M S G + + +++ + S L + K E V
Sbjct: 753 KMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKAQEMENV 795
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 140/278 (50%), Gaps = 4/278 (1%)
Query: 12 TFNILICTCGEVGLARK---VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T +I + C G K V F K K + P + SY + L+G Q KL Y
Sbjct: 84 TEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFY 143
Query: 69 QQMSDEGYAPDILTYNIVMCAKYR-LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M + G P + + N+++ A + G +D R+ EM G PD +TY L++ L +
Sbjct: 144 RYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCR 203
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A L M+ P+V+ +T+L+ GL ++ +LD+ +EMA+KG P+V
Sbjct: 204 LGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFT 263
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ ++ + +G +A +L D M+++ LPN+ TY++++ G C GK EA ++ M+
Sbjct: 264 YSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMK 323
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ +Y ++S + K EA + MV G
Sbjct: 324 LQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGG 361
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 131/293 (44%), Gaps = 9/293 (3%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G P + + N+LI C G + F + P +Y +++ L +
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLG 205
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + ++++M + +P ++TY ++ + LD RLL+EM G P+ TY+
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K AL LL+ M P+++ ++TL+ GL + G L D M +
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY-------NSMIRGFCM 232
G PD Y +I+ + + +A + D M+ G PN T+ N +++G C
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A + M +RG + + +++LV+ N G L +A ++ MV G
Sbjct: 386 EHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDG 437
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 139/302 (46%), Gaps = 24/302 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P + T+ LI C G++G A+ E F + + P +Y +++H L
Sbjct: 182 MPNRGCPPDSYTYGTLINGLCRLGKIGEAK---ELFKEMETKACSPTVVTYTSLIHGLCQ 238
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M+ +G P++ TY+ +M + G + LLD M P+ T
Sbjct: 239 SKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMIT 298
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-----F 172
Y+ L+H L K K A+ +L+ MK G P + ++ G D CK+ F
Sbjct: 299 YSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFC-----DICKFHEAANF 353
Query: 173 FDEMANKGCMPDVVCYT--VMITSYIAAG----ELEKAQDLFDGMITKGQLPNVFTYNSM 226
DEM G P+ + ++ V I + + G +A L+ M T+G + T++S+
Sbjct: 354 LDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSL 413
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR--HMVEK 284
+ FC G +A ++ EM GC P+ + +N +V + K+ E+ E+++ MVE
Sbjct: 414 VNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVEH 473
Query: 285 GK 286
K
Sbjct: 474 RK 475
>gi|302816960|ref|XP_002990157.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
gi|300142012|gb|EFJ08717.1| hypothetical protein SELMODRAFT_131102 [Selaginella moellendorffii]
Length = 760
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF ++ LIC G G K VE F K+ +P YNA++ A Y
Sbjct: 151 GFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTA 209
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++++M ++G +PD +T+N ++ A R + ++ R+ EM G + D TYN L+
Sbjct: 210 LRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIAT 269
Query: 125 LGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+G + L+ M K G +PSV+ ++T++DG ++ G F EM N+ P
Sbjct: 270 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 329
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D +CY M+ + G ++A + M G ++ TYN+++ + GKF EA +++
Sbjct: 330 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 389
Query: 244 KEMESRGCNPNFLVYNTLV 262
+EM+ RG +PN L Y+ L+
Sbjct: 390 EEMKQRGASPNILTYSALI 408
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 4/268 (1%)
Query: 21 GEVGLARKVVERFIKSKLF-NFRP-FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAP 78
G G KVV+ F L N R + + I+ +L + + + ++ + G+
Sbjct: 95 GHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGN 154
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ Y+ ++CA R GKL + + + M + P+ YN ++ KG AL +
Sbjct: 155 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 213
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M E G P + F TL+ RA + C F EM +G D V Y +I +Y
Sbjct: 214 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG 273
Query: 199 GELEKAQDLFDGMI-TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G++ L + M + G P+V TY++MI G+ G EA + +EM ++ P+ +
Sbjct: 274 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 333
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+V G EAH + R M E G
Sbjct: 334 YNTMVDIHARLGNFDEAHSIRRAMEEAG 361
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 9/235 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
M E G T+N LI C G++ L ++E KS P +Y+ ++ +A
Sbjct: 251 MEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSS--GIEPSVITYSTMIDGYAK 308
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
LG+ + ++Q+M ++ PD + YN ++ RLG D+ H + M +GF+ D
Sbjct: 309 LGLAHEAIA--LFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDI 366
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN LL GK K A++LL MK+ G P++L ++ L+D + G F +
Sbjct: 367 VTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 426
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+ G PDVV Y+ ++ G ++A L + M G PNV TYNS++ +
Sbjct: 427 VKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 481
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 121/287 (42%), Gaps = 55/287 (19%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR----L 102
+YNA+L + +++ + ++M G +P+ILTY+ ++ A + G FHR L
Sbjct: 368 TYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHG----FHRDAMAL 423
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++ ++G PD Y+ L+ K P AL LL M + G P+V+ + +L+D R
Sbjct: 424 FQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYGR 483
Query: 163 A-----GNLDACKYF------------------------------------FDEMANKGC 181
N ++F F EMA G
Sbjct: 484 QCLMVRKNFPKLRFFLLPRVTMLLKPSVDYDQQSLVDPKQKQALVLAAARVFREMAKNGV 543
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGM-ITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV ++ ++ + +E A L + M + G++ V + ++ GF + + +A
Sbjct: 544 KPNVVTFSSILNACSHCASVEDASSLLEAMRVFDGRVYGV--THGLLMGFRIR-VWRDAE 600
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
T+ E+ + G N YN L L + + A + RH+ +K +
Sbjct: 601 TLFNELTTLGHNTAVAFYNALTDVLWHFEQAKAAKD--RHVWDKAWW 645
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ G P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 HLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G P VV
Sbjct: 409 RDGYAPSVV 417
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 151/288 (52%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+N++ +C G+V A + V R + S+ +P +YN +L ALL
Sbjct: 141 MLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFV-RTLNSR--GCKPDVITYNILLRALLN 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E ++ G P+++TY+I++ + R GK+++ L+ M G +PD +
Sbjct: 198 QGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYC 257
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ + K A+ L+ M GF P ++++ T+M L + GN D F ++
Sbjct: 258 YDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLD 317
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC P+V Y M+++ ++G+ +A + M++KG P+V TYNS+I C G D
Sbjct: 318 EVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVD 377
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ +M S PN + Y T++ L A ++ +A EV+ M+E G
Sbjct: 378 EAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENG 425
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 112/209 (53%), Gaps = 1/209 (0%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL-GKGDKPLAALN 136
PD+ YN V+ + +++ +LD M R GFSPD T+NI++ GKG LA
Sbjct: 42 PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+K+ P+++ +T L++ G +D DEM ++G PD Y V+
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G++++A + + ++G P+V TYN ++R GK+DE M E+ SRGC PN +
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y+ L+S+L GK+ E+ +++ M EKG
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKG 250
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 131/269 (48%), Gaps = 4/269 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM-SDEGY 76
C + A+ V++R K F P ++N ++ G + L V++++ D
Sbjct: 55 CKANRIESAKTVLDRM---KRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNC 111
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P ++TY I++ A G +D+ +LLDEM G PD TYN++ L K K A
Sbjct: 112 KPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFE 171
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ + G P V+ + L+ L G D + + E+ ++GC P+VV Y+++I+S
Sbjct: 172 FVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLC 231
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G++E++ +L M KG P+ + Y+ +I FC GK D A + M G P+ +
Sbjct: 232 RDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIV 291
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+++ L G A E+ + E G
Sbjct: 292 NYNTIMAALCKNGNGDHAVEIFGKLDEVG 320
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 128/247 (51%), Gaps = 5/247 (2%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +YNA++ + + + V +M +G++PD++T+NI++ GK+D +
Sbjct: 41 KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100
Query: 102 LLDEMGR-SGFSPDFHTYNILL--HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ +E+ + + P TY IL+ ++L G AL LL+ M G +P + +
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGID--EALKLLDEMLSRGLEPDTFTYNVITR 158
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL + G +D F + ++GC PDV+ Y +++ + + G+ ++ + + ++G P
Sbjct: 159 GLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEP 218
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV TY+ +I C GK +E+ ++K M+ +G P+ Y+ L++ GKL A E +
Sbjct: 219 NVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFL 278
Query: 279 RHMVEKG 285
M+ G
Sbjct: 279 DCMICDG 285
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 116/242 (47%), Gaps = 4/242 (1%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
P +Y+ ++ +L R K+ E V + M ++G PD Y+ ++ A R GKLD
Sbjct: 217 EPNVVTYSILISSLC--RDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LD M GF PD YN ++ L K A+ + + EVG P+V + T++
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L +G+ +M +KG PDV+ Y +I+ G +++A L M++ PN
Sbjct: 335 LWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPN 394
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ +Y +++ G C A + D+A ++ M GC PN Y L+ + +G +A E+
Sbjct: 395 IVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELAN 454
Query: 280 HM 281
+
Sbjct: 455 SL 456
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL---IEWVY 68
T++ILI + G + V K P Y+ ++ A R+ KL IE++
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFC--REGKLDMAIEFLD 279
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ D G+ PDI+ YN +M A + G D + ++ G P+ +YN +L L
Sbjct: 280 CMICD-GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSS 338
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL +++ M G DP V+ + +L+ L R G +D +M + P++V Y
Sbjct: 339 GDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSY 398
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
++ A ++ A ++ MI G PN TY +I G +G +A
Sbjct: 399 KTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQA 449
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 60/108 (55%), Gaps = 1/108 (0%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M K PDV+ T +I + + ++KA + G++ K P+VF YN++I GFC A +
Sbjct: 1 MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVM-GILEKHGKPDVFAYNAVISGFCKANR 59
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ A T++ M+ +G +P+ + +N ++ GK+ A +V +++
Sbjct: 60 IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLK 107
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 148/277 (53%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NIL+ C G+V A+ V+ +K+ + +P +Y+ ++ + + K + V+
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACV---KPDVITYSTLMDGYFLVYELKKAQHVF 327
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS G PD+ +Y I++ + +D+ L EM + P TY+ L+ L K
Sbjct: 328 NAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +L++ M++ G +V+ + +L+DGL + G+LD F++M ++G P +
Sbjct: 388 GRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+ AQ+ F ++TKG +V+ YN MI G C G +EA TM+ +ME
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEE 507
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + ++ +++ L + +A +++R M+ +G
Sbjct: 508 NGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 134/270 (49%), Gaps = 13/270 (4%)
Query: 19 TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY---QQMSDEG 75
T G + L RK+ R K P YN I+ AL +Y+L+ Y +M+ +G
Sbjct: 180 TRGAIKLVRKIDGRLTK-------PNVEMYNTIIDALC---KYQLVSEAYGLFSEMTAKG 229
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ D++TY ++ KL + LL+EM +P+ +TYNIL+ L K K A
Sbjct: 230 ISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
N+L M + P V+ ++TLMDG L ++ F+ M+ G PDV YT++I +
Sbjct: 290 NVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGF 349
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+++A +LF M K +P + TY+S+I G C +G+ ++ EM RG N
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANV 409
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN+L+ L G L A + M ++G
Sbjct: 410 ITYNSLIDGLCKNGHLDRAIALFNKMKDQG 439
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ P I+ +N ++ + ++ L + G PD T NIL++ +
Sbjct: 55 HTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++L + + G+ P + FTTL+ GL G ++ +F D++ +G D V Y +I
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174
Query: 196 IAAGE-----------------------------------LEKAQDLFDGMITKGQLPNV 220
G+ + +A LF M KG +V
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY ++I GFC+A K EA ++ EM + NPN YN LV L GK+ EA V+
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAV 294
Query: 281 MVE 283
M++
Sbjct: 295 MLK 297
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 35/270 (12%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+N IL + I+ Y + ++ +G PD++T NI++ +G++ +L ++
Sbjct: 61 QFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN- 165
+ G+ P T+ L+ L + AL+ + + G + + TL++G+ + G+
Sbjct: 121 LKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDT 180
Query: 166 -------------------------LDA-CKY--------FFDEMANKGCMPDVVCYTVM 191
+DA CKY F EM KG DVV YT +
Sbjct: 181 RGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTL 240
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + A +L++A L + M+ K PNV+TYN ++ C GK EA ++ M
Sbjct: 241 IYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACV 300
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + Y+TL+ +L +A V M
Sbjct: 301 KPDVITYSTLMDGYFLVYELKKAQHVFNAM 330
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 128/312 (41%), Gaps = 41/312 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T NILI C G++ V+ + +K ++P ++ ++ L Q +
Sbjct: 96 TLNILINCFCHMGQITFGFSVLAKILKR---GYQPHTITFTTLIKGLCLKGQVNKALHFH 152
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++ +G D ++Y ++ ++G +L+ ++ P+ YN ++ L K
Sbjct: 153 DKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKY 212
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A L + M G V+ +TTL+ G A L +EM K P+V Y
Sbjct: 213 QLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTY 272
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS----------------------- 225
+++ + G++++A+++ M+ P+V TY++
Sbjct: 273 NILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSL 332
Query: 226 ------------MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+I GFC DEA + KEM + P + Y++L+ L +G+++
Sbjct: 333 MGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISY 392
Query: 274 AHEVIRHMVEKG 285
++I M ++G
Sbjct: 393 VWDLIDEMRDRG 404
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 92/226 (40%), Gaps = 35/226 (15%)
Query: 27 RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV 86
+K F L P +SY +++ + ++++M + P I+TY+ +
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+ + G++ L+DEM G + TYN L+ L K A+ L N MK+ G
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Query: 147 DPSVLHFTTLMDGLSRAGNL-DACKYFFD------------------------------- 174
P FT L+DGL + G L DA + F D
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500
Query: 175 ---EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+M GC+P+ V + ++I + E +KA+ L MI +G L
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 85/190 (44%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+ QF+R+L +P +N +L K A++L + ++ G P ++
Sbjct: 44 VSQFNRML----CMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ G + ++ +G P + +T +I G++ KA D ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ +Y ++I G C G A ++++++ R PN +YNT++ L ++EA+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219
Query: 276 EVIRHMVEKG 285
+ M KG
Sbjct: 220 GLFSEMTAKG 229
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/148 (18%), Positives = 71/148 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++ N M + P ++ F ++D ++ + + KG PD++ ++I
Sbjct: 43 AVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILIN 102
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ + ++ +G P+ T+ ++I+G C+ G+ ++A ++ ++G
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKF 162
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + Y TL++ + G A +++R +
Sbjct: 163 DQVSYGTLINGVCKIGDTRGAIKLVRKI 190
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T+N LI + G + + F K K RP ++ +L L +
Sbjct: 400 MRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGR 459
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + +Q + +GY D+ YN+++ + G L++ +L +M +G P+ T++I
Sbjct: 460 LKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDI 519
Query: 121 LLHVLGKGDKPLAALNLLNHM 141
+++ L K D+ A LL M
Sbjct: 520 IINALFKKDENDKAEKLLRQM 540
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 50/110 (45%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N+D F+ M P ++ + ++ S+ A L + KG P++ T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+I FC G+ +++ ++ RG P+ + + TL+ L G++ +A
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKA 148
>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
Length = 759
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF ++ LIC G G K VE F K+ +P YNA++ A Y
Sbjct: 150 GFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKVV-CKPNLVVYNAVIDACSKGGDYPTA 208
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++++M ++G +PD +T+N ++ A R + ++ R+ EM G + D TYN L+
Sbjct: 209 LRIFREMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIAT 268
Query: 125 LGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+G + L+ M K G +PSV+ ++T++DG ++ G F EM N+ P
Sbjct: 269 YCRGGQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEP 328
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D +CY M+ + G ++A + M G ++ TYN+++ + GKF EA +++
Sbjct: 329 DGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLL 388
Query: 244 KEMESRGCNPNFLVYNTLV 262
+EM+ RG +PN L Y+ L+
Sbjct: 389 EEMKQRGASPNILTYSALI 407
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 4/268 (1%)
Query: 21 GEVGLARKVVERFIKSKLF-NFRP-FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAP 78
G G KVV+ F L N R + + I+ +L + + + ++ + G+
Sbjct: 94 GHSGQWEKVVKSFDWMVLQQNLRSQWDKVTSTIISSLGRLGRSDWAQLIFDRAVGAGFGN 153
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ Y+ ++CA R GKL + + + M + P+ YN ++ KG AL +
Sbjct: 154 NVFVYSSLICAYGRSGKLAKAVEIFEAM-KVVCKPNLVVYNAVIDACSKGGDYPTALRIF 212
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M E G P + F TL+ RA + C F EM +G D V Y +I +Y
Sbjct: 213 REMLEQGMSPDRITFNTLISAAGRANRWEECDRIFAEMEERGIARDDVTYNTLIATYCRG 272
Query: 199 GELEKAQDLFDGMI-TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G++ L + M + G P+V TY++MI G+ G EA + +EM ++ P+ +
Sbjct: 273 GQMHLGAALMETMAKSSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGIC 332
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+V G EAH + R M E G
Sbjct: 333 YNTMVDIHARLGNFDEAHSIRRAMEEAG 360
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 9/235 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
M E G T+N LI C G++ L ++E KS P +Y+ ++ +A
Sbjct: 250 MEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSS--GIEPSVITYSTMIDGYAK 307
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
LG+ + ++Q+M ++ PD + YN ++ RLG D+ H + M +GF+ D
Sbjct: 308 LGLAHEAIA--LFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGFAKDI 365
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN LL GK K A++LL MK+ G P++L ++ L+D + G F +
Sbjct: 366 VTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMALFQD 425
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+ G PDVV Y+ ++ G ++A L + M G PNV TYNS++ +
Sbjct: 426 VKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY 480
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 143/364 (39%), Gaps = 86/364 (23%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAI--LHALLGIRQ 60
+G + T++ +I ++GLA + + F + + N P YN + +HA LG
Sbjct: 288 SSGIEPSVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLG--N 345
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M + G+A DI+TYN ++ + + GK + LL+EM + G SP+ TY+
Sbjct: 346 FDEAHSIRRAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSA 405
Query: 121 LLH---------------------------------VLG--KGDKPLAALNLLNHMKEVG 145
L+ V G K P AL LL M + G
Sbjct: 406 LIDAYCKHGFHRDAMALFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNG 465
Query: 146 FDPSVLHFTTLMDGLSRA-----------------------------------------G 164
P+V+ + +L+D R
Sbjct: 466 IRPNVITYNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQA 525
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM-ITKGQLPNVFTY 223
+ A F EMA G P+VV ++ ++ + +E A +L + M + G++ V
Sbjct: 526 LVLAAARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGV--T 583
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ ++ GF + + +A T+ E+ + G N YN L L + + A + RH+ +
Sbjct: 584 HGLLMGFRIR-VWRDAETLFNELTTLGHNTAVAFYNALTDVLWHFEQAQAAKD--RHVWD 640
Query: 284 KGKY 287
K +
Sbjct: 641 KAWW 644
>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 917
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 130/282 (46%), Gaps = 1/282 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKL 63
G+ T F+ LI G GL + + F K + RP +YNA++ A G ++K
Sbjct: 263 GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQ 322
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + +M PD +T+N ++ R G + L DEM D +YN LL
Sbjct: 323 VAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLD 382
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ KG + A +L M P+V+ ++T++DG ++AG D F EM
Sbjct: 383 AICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIAL 442
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D V Y +++ Y G E+A D+ M + G +V TYN+++ G+ GK+DE +
Sbjct: 443 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 502
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ PN L Y+TL+ G EA EV R G
Sbjct: 503 AEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAG 544
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 123/258 (47%), Gaps = 14/258 (5%)
Query: 12 TFNILICTCGEVGL---ARKVVE----RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
TFN L+ C GL AR + + R I+ +F SYN +L A+ Q L
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVF-------SYNTLLDAICKGGQMDLA 393
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ QM + P++++Y+ V+ + G+ D+ L EM + D +YN LL +
Sbjct: 394 FEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSI 453
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K + AL++L M VG V+ + L+ G + G D K F EM + +P+
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPN 513
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
++ Y+ +I Y G ++A ++F + G +V Y+++I C G A +++
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 245 EMESRGCNPNFLVYNTLV 262
EM G +PN + YN+++
Sbjct: 574 EMTKEGISPNVVTYNSII 591
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 107/220 (48%), Gaps = 1/220 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ GY + ++ ++ A R G ++ + + M G P+ TYN ++ G
Sbjct: 255 IFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG 314
Query: 127 KGDKPLAAL-NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
KG + + M+ P + F +L+ SR G +A + FDEM+N+ DV
Sbjct: 315 KGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDV 374
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y ++ + G+++ A ++ M K +PNV +Y+++I GF AG+FDEA + E
Sbjct: 375 FSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGE 434
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M + + YNTL+S G+ EA +++R M G
Sbjct: 435 MRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 4/207 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+++ +I + G + + F + + N + SYN +L + + + + ++M
Sbjct: 411 SYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G D++TYN ++ + GK D+ ++ EM R P+ TY+ L+ KG
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ + K G V+ ++ L+D L + G + + DEM +G P+VV Y +
Sbjct: 531 KEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSI 590
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLP 218
I ++ + +E++ D +G G LP
Sbjct: 591 IDAFGRSATMERSADYSNG----GSLP 613
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 1/175 (0%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ ++ LG+ K A + G+ +V F+ L+ R+G + F+ M
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 179 KGCMPDVVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P++V Y +I + G E ++ FD M P+ T+NS++ G ++
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWE 356
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + EM +R + YNTL+ + G++ A E++ M K ++VS
Sbjct: 357 AARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVS 411
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 102/248 (41%), Gaps = 18/248 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N L+ G+ G +V + F + K + P +Y+ ++
Sbjct: 470 MASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGL 529
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YK V+++ G D++ Y+ ++ A + G + L+DEM + G SP+ TYN
Sbjct: 530 YKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ G+ + + N + F S L T +G + F ++ ++G
Sbjct: 590 IIDAFGRSATMERSADYSNG-GSLPFSSSALSELTETEG-------NRVIQLFGQLTSEG 641
Query: 181 CMPDVVCYTVMITSYIAAG--ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+T G EL ++F M PNV T+++++ F++
Sbjct: 642 --------NNRMTKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFED 693
Query: 239 ACTMMKEM 246
A +++E+
Sbjct: 694 ASMLLEEL 701
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 18/114 (15%)
Query: 167 DACKYFFDEMANKGCMPDVVCY------------------TVMITSYIAAGELEKAQDLF 208
D C Y E+ N+G V + + MI++ G++ A+ +F
Sbjct: 197 DDCTYIIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIF 256
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ + G V+ ++++I + +G +EA ++ M+ G PN + YN ++
Sbjct: 257 ETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVI 310
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 134/253 (52%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H+ + + +L + V+ ++ G P ++++N +M +LG L++ RL + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++AQDL D MI KG P+ TY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
E G Y ++++F
Sbjct: 379 PEIGTYTMIINEF 391
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 136/272 (50%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E G R +E + +K FR ++ +L L+ ++ +KL+ Y++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEENL 128
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ GY + +NI+M + + G++ + D + + G P ++N L++ K
Sbjct: 129 ECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
L N M+ G P V ++ L++GL + +D FDEM +KG +P+ V +T +I
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLI 248
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G ++ A +++ M+++ P++ TYN++I G C G +A ++ EM +G
Sbjct: 249 DGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLK 308
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL+ G L A E + M+++
Sbjct: 309 PDKITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 132/287 (45%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 70/156 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G P++
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G +P+V T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +M +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 129/247 (52%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F P SYNA+L L +++ ++ + ++M P+I+T+N ++ R G ++
Sbjct: 258 FGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 317
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
H +L +M G +PD Y ++ + K A +LN M G P+V+ + TL+
Sbjct: 318 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 377
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL A + + EM +K C D V + +++ + G +++ +L + M+ G +P
Sbjct: 378 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 437
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TY ++I GFC G DEA ++K M + GC PN + Y ++ L +A + +A +++
Sbjct: 438 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 497
Query: 279 RHMVEKG 285
M+++G
Sbjct: 498 SQMIQQG 504
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 6/305 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN LI GL +V E + P Y I+ +
Sbjct: 290 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M G P+++ YN ++ + ++ LL EM D T+NI
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + LL M E G P V+ +TT+++G + G +D M G
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + YT+++ +A A+DL MI +G N T+N++I C G ++A
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK------YIHLVSKF 294
++K+M GC+P+ + Y+T++ L AGK EA E++ MV KG Y + S
Sbjct: 530 ELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASAL 589
Query: 295 KRYKR 299
R R
Sbjct: 590 SREGR 594
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 135/274 (49%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G R + +I C G + +A +++ R + +P YN +L L
Sbjct: 325 MVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPS---YGLKPNVVCYNTLLKGLCS 381
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D+ D +T+NI++ + G +D+ LL++M G PD T
Sbjct: 382 AERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVIT 441
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL A + +M
Sbjct: 442 YTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMI 501
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC + + + +I G +E+A +L M+ G P++ +Y+++I G AGK D
Sbjct: 502 QQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTD 561
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ S L G++
Sbjct: 562 EALELLNVMVNKGMSPNTIIYSSIASALSREGRI 595
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 119/250 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G T+ +I + GL + V +P SY +L L +
Sbjct: 430 MLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 489
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + QM +G + +T+N ++ + G ++Q LL +M +G SPD +Y+
Sbjct: 490 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYST 549
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ LGK K AL LLN M G P+ + ++++ LSR G ++ FD + +
Sbjct: 550 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTT 609
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D V Y +I+S GE E+A + M++ G +PN TY +IRG G EA
Sbjct: 610 IRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQ 669
Query: 241 TMMKEMESRG 250
M+ E+ S+G
Sbjct: 670 EMLTELCSKG 679
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 135/298 (45%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 395 MFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN---GFCK 451
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + M+ G P+ ++Y IV+ + L+ +M + G + T
Sbjct: 452 EGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPIT 511
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L++ L K A+ LL M G P ++ ++T++DGL +AG D + M
Sbjct: 512 FNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 571
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + ++ G + K +FD + + YN++I C G+ +
Sbjct: 572 NKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETE 631
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY-IHLVSKF 294
A + M S GC PN Y L+ L + G + EA E++ + KG HL+ F
Sbjct: 632 RAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRKHLMKHF 689
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + A V++ + P Y+ IL A ++ V + + G
Sbjct: 169 LCARGRIADALAVLDEMPRRGCAPIPPM---YHVILEAACRGGGFRSAVRVLEDLHARGC 225
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
A D+ N+V+ A G +D+ LL ++ G PD +YN +L L +
Sbjct: 226 ALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQE 285
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M + P+++ F TL+ L R G + +M GC PD+ Y +I
Sbjct: 286 LMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGIC 345
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G LE A ++ + M + G PNV YN++++G C A +++E ++ EM + C + +
Sbjct: 346 KEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDV 405
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N LV G + E++ M+E G
Sbjct: 406 TFNILVDFFCQNGLVDRVIELLEQMLEHG 434
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 99/208 (47%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ TY V+ A G++ +LDEM R G +P Y+++L +G +A+ +
Sbjct: 157 PNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRV 216
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + G V + +++ + G++D + ++ + GC PDVV Y ++
Sbjct: 217 LEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCM 276
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A Q+L + M+ PN+ T+N++I C G F+ ++ +M GC P+ +
Sbjct: 277 AKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRM 336
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y T++ + G L AHE++ M G
Sbjct: 337 YATIIDGICKEGHLEVAHEILNRMPSYG 364
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 3/203 (1%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ R G+L+ RL + P+ +TY ++ L + AL +L+ M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAV---PVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + +++ R G + +++ +GC DV +++ + G ++
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L + + G P+V +YN++++G CMA ++ +M+EM C PN + +NTL+
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
S L G HEV+ MVE G
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHG 329
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 143/284 (50%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C GEV A ++V+ + L +P ++N++++ + +
Sbjct: 187 GCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGL---KPNLVTFNSVVNGICKAGRM 243
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+ +M EG APD ++YN ++ ++G + + EM R G PD T+ L
Sbjct: 244 EDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSL 303
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+HV+ K A+ L+ M+E G + + FT L+DG + G LD EM
Sbjct: 304 IHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI 363
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VVCY +I Y G +++A++L M KG P+V TY++++ +C G A
Sbjct: 364 QPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQ 423
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M G P+ + Y++L+ L +L +AH + ++M+ G
Sbjct: 424 LNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 3/282 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIRQYKL 63
G+ + +N ++ + L RF S L + P +YN ++ AL G K
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPS--ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 175
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V + M G P+ +TYN ++ A R G++D+ RL+D M G P+ T+N +++
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ K + A + + M + G P + + TL+ G + G F EM KG MP
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV +T +I AG LE+A L M +G N T+ ++I GFC G D+A +
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM P+ + YN L++ G++ EA E++R M KG
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 138/303 (45%), Gaps = 21/303 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TF LI C G + A V + ++ +P YNA+++
Sbjct: 323 MRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRI---QPSVVCYNALINGYCM 379
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M +G PD++TY+ ++ A + G +L +M +G PD T
Sbjct: 380 VGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAIT 439
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ VL + + A L +M +G P + +T+L+DG + GN++ DEM
Sbjct: 440 YSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMV 499
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR--------- 228
G +PDVV Y+V+I + ++AQ L + + +P Y++++R
Sbjct: 500 KAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKS 559
Query: 229 ------GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
GFCM G +EA + + + R N + VY+ L+ G + +A + M+
Sbjct: 560 VLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQML 619
Query: 283 EKG 285
+ G
Sbjct: 620 QCG 622
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 119/278 (42%), Gaps = 20/278 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSY---NA 50
M G TF LI C G VGL R++ ER ++ F + +
Sbjct: 288 MTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGF 347
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+ ALL +R+ + P ++ YN ++ +G++D+ L+ EM G
Sbjct: 348 LDDALLAVREMRQCR----------IQPSVVCYNALINGYCMVGRMDEARELVREMEAKG 397
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD TY+ +L K +A L M E G P + +++L+ L L
Sbjct: 398 VKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAH 457
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F M + G PD V YT +I + G +E+A L D M+ G LP+V TY+ +I G
Sbjct: 458 VLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGL 517
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ + EA ++ ++ P + Y+ L+ RNA
Sbjct: 518 SKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNA 555
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 65/113 (57%), Gaps = 1/113 (0%)
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P V+ Y ++ + ++ L A+ FD M++ G PNV+TYN ++R C G EA
Sbjct: 118 GYAPSVLAYNAVLLA-LSDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++++M GC+PN + YNTLV+ AG++ A ++ M E G +LV+
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVT 229
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 46/237 (19%), Positives = 93/237 (39%), Gaps = 21/237 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+ LI C G V A + + +K+ + P +Y+ +++ L
Sbjct: 463 MISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVL---PDVVTYSVLINGLSK 519
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--CAKYRL-------------GKLDQFHRL 102
+ K + + ++ E P + Y+ +M C L G +++ ++
Sbjct: 520 SARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKV 579
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ ++ D Y++L+H + + AL+ M + GF P+ +L+ GL
Sbjct: 580 YQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFE 639
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
G + ++ N + D +I + G ++ D+ GM G LP+
Sbjct: 640 KGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPS 696
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 142/280 (50%), Gaps = 11/280 (3%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P +FNILI C+C ++ A + K F P ++N +LH L +
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTK---LGFHPTLVTFNTLLHGLCVEDRVS 67
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++ QM P+++T+ +M R G++ + LLD M G P+ TY ++
Sbjct: 68 EALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123
Query: 123 HVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K ++ALNLL M+E+ P V+ ++ ++DGL + G + F EM +KG
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y+ MI + ++G+ +AQ L M+ + P+V T++ +I G + A
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+++EM S G PN + NTL+ L ++GKL +A E+ + M
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 51/336 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+ ++ C G+ A ++ + +L + +P Y+AI+ L
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM--EELSHIKPDVVIYSAIIDGLWK 164
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M D+G PDI+TY+ ++ GK + RLL EM SPD T
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF---- 172
++ L++ L K +A +LL M G P+V+ TL+DGL +G L DA + F
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQ 284
Query: 173 -----------------------------------------FDEMANKGCMPDVVCYTVM 191
++EM ++G +PD V Y+ M
Sbjct: 285 KSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSM 344
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I L++A +FD M +K PN+ T+N++I G+C AG D+ + EM RG
Sbjct: 345 INGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
N + Y TL+ R G + + ++ + M+ G Y
Sbjct: 405 VANAITYITLIRGFRKVGNINGSLDIFQEMISSGVY 440
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 14/275 (5%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C+ G+ A+++++ + K+ P +++ +++AL+ + + Q+M G
Sbjct: 198 CSSGKWSEAQRLLQEMLVRKI---SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-----------GFSPDFHTYNILLHVLG 126
P+++T N ++ GKL + M +S G PD TYNIL+ L
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K L A L M G P + ++++++GL + LD FD M +K P++V
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +IT Y AG ++ +LF M +G + N TY ++IRGF G + + + +EM
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
S G P+ + +++ L + +L A ++ +
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 85/173 (49%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G PD+ TYNI++ GK + L +EM G PD TY+ +++ L K + A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ + M F P+++ F TL+ G +AG +D F EM +G + + + Y +I
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ G + + D+F MI+ G P+ T +M+ G + A M++E++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +++NIL+ K AL+ + ++GF P+++ F TL+ GL + F
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M C P+VV +T ++ G + +A L D M+ G PN TY +++ G C
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 234 GKFDEACTMMKEMESRG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G A ++++ME P+ ++Y+ ++ L G+ +A + M +KG + +V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 246 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 305
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 306 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 365
Query: 283 -EKGKYIHLVSKF 294
+ G Y +V++F
Sbjct: 366 PDTGTYTMIVNEF 378
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 170
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 171 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVT 230
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 290
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 291 MKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 350
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +V+ G + + ++++ M G +V+
Sbjct: 351 DAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 405
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 250 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 309
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G PD
Sbjct: 310 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 369
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT+++ + G++ K L M G P+V TYN ++ G
Sbjct: 370 TYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 142/280 (50%), Gaps = 11/280 (3%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P +FNILI C+C ++ A + K F P ++N +LH L +
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTK---LGFHPTLVTFNTLLHGLCVEDRVS 67
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++ QM P+++T+ +M R G++ + LLD M G P+ TY ++
Sbjct: 68 EALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123
Query: 123 HVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K ++ALNLL M+E+ P V+ ++ ++DGL + G + F EM +KG
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y+ MI + ++G+ +AQ L M+ + P+V T++ +I G + A
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+++EM S G PN + NTL+ L ++GKL +A E+ + M
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 152/336 (45%), Gaps = 51/336 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+ ++ C G+ A ++ + +L + +P Y+AI+ L
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM--EELSHIKPDVVIYSAIIDGLWK 164
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M D+G PDI+TY+ ++ GK + RLL EM SPD T
Sbjct: 165 DGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVT 224
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF---- 172
++ L++ L K +A +LL M G P+V+ TL+DGL +G L DA + F
Sbjct: 225 FSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQ 284
Query: 173 -----------------------------------------FDEMANKGCMPDVVCYTVM 191
++EM ++G +PD V Y+ M
Sbjct: 285 KSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSM 344
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I L++A +FD M +K PN+ T+N++I G+C AG D+ + EM RG
Sbjct: 345 INGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGI 404
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
N + Y TL+ R G + + ++ + M+ G Y
Sbjct: 405 VANAITYITLIRGFRKVGNINGSLDIFQEMISSGVY 440
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 131/275 (47%), Gaps = 14/275 (5%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C+ G+ A+++++ + K+ P +++ +++AL+ + + Q+M G
Sbjct: 198 CSSGKWSEAQRLLQEMLVRKI---SPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-----------GFSPDFHTYNILLHVLG 126
P+++T N ++ GKL + M +S G PD TYNIL+ L
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K L A L M G P + ++++++GL + LD FD M +K P++V
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +IT Y AG ++ +LF M +G + N TY ++IRGF G + + + +EM
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
S G P+ + +++ L + +L +A ++ +
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G PD+ TYNI++ GK + L +EM G PD TY+ +++ L K + A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ + M F P+++ F TL+ G +AG +D F EM +G + + + Y +I
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ G + + D+F MI+ G P+ T +M+ G + +A M++E++
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 5/180 (2%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +++NIL+ K AL+ + ++GF P+++ F TL+ GL + F
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M C P+VV +T ++ G + +A L D M+ G PN TY +++ G C
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 234 GKFDEACTMMKEMESRG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G A ++++ME P+ ++Y+ ++ L G+ +A + M +KG + +V+
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 283 -EKGKYIHLVSKF 294
+ G Y +V++F
Sbjct: 385 PDTGTYTMIVNEF 397
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +V+ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 424
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G PD
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT+++ + G++ K L M G P+V TYN ++ G
Sbjct: 389 TYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GF T+N LI C G +G A + ++ + N + + N IL L
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK---NMKMDSVTLNTILRTL-- 463
Query: 58 IRQYKLIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
R+ KL E Y+ +S GY D ++Y ++ ++ G +D+ +L DEM P
Sbjct: 464 CREKKL-EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN ++ L + K A++ LN + E G P + T++ G R G+++ F +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M PDV +++ G LEKA LF+ ++KG+ + TYN++I C G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ D+A ++ EME + P+ YN +++ L ++G++ EA E + M+EKG
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 134/291 (46%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
I+ G TFNI+I + VE +N P +YN IL L +
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRL 259
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ M G P+ TYNI++ ++G L + +++ M ++ PD TYN+L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ L + A L + M+ + P V+ + TL++G + +EM+ KG
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ V + +M+ Y G+++ A + M G P+ TYN++I G+C AG EA
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M EM + + + NT++ L KL EA++++ ++G +I VS
Sbjct: 440 TMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 138/321 (42%), Gaps = 41/321 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+NIL+ C G + A V+E ++ L P +YN +++ L
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL---PDVWTYNMLINGLCN 325
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M + PD+++YN ++ K+ + +LL+EM G P+ T
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NI++ K K A N + M+E GF P + + TL++G +AGN+ DEM
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Query: 178 NK-----------------------------------GCMPDVVCYTVMITSYIAAGELE 202
K G D V Y +I Y G ++
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L+D M K +P+ TYN +I G C GK ++A + + E+ G P+ YNT++
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
G + +A + MVE
Sbjct: 566 HGYCREGDVEKAFQFHNKMVE 586
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M + G++PD +TYN ++ + G + + R +DEMGR D T N +L L +
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A LL+ ++ G+ + + TL+ G + GN+D +DEM K +P V Y
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G+ E+A + ++ G LP+ TYN+++ G+C G ++A +M
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ N L+ L G L +A ++ V KGK I V+
Sbjct: 588 SFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVT 630
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 88/188 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M ++ P +TYN ++ + GK +Q L+E+ SG PD TYN +LH
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A N M E F P V L+ GL G L+ F+ +KG D V
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTV 629
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +ITS G L+ A +L M K P+ +TYN++I +G+ EA M +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 247 ESRGCNPN 254
+G P+
Sbjct: 690 LEKGNLPD 697
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 26/268 (9%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G V A K+ + + ++ P +YN I+ L + + ++ + G PD
Sbjct: 502 GNVDRALKLWDEMKEKEII---PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDE 558
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
TYN ++ R G +++ + ++M + F PD T NILL L AL L N
Sbjct: 559 TTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNT 618
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
G + + TL+ L + G LD EM K PD Y +IT+ +G
Sbjct: 619 WVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGR 678
Query: 201 LEKAQDLFDGMITKGQLPN-----------------------VFTYNSMIRGFCMAGKFD 237
+ +A++ M+ KG LP+ Y+ I+ C GK+
Sbjct: 679 IREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYK 738
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
+A + E + +G + Y L+ L
Sbjct: 739 DAMRIFGESKQKGITVDKSTYINLMDGL 766
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F+ R F ++ + +L + R++ L + + S P + + A + G+
Sbjct: 99 FSHRKFSDAKSLLLGFIATDRRHDLHLSILRLTS-----PSKALLDTAIGAYVQSGQPHH 153
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA---ALNLLNHMKEVGFDPSVLHFTT 155
++ +M R P+ T N LL+ L + + + N ++G P+V F
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++ G F + M C PD V Y ++ + G L A+DL M ++G
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRG 273
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
LPN TYN ++ G+C G EA +++ M P+ YN L++ L N G++ EA
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333
Query: 276 EVIRHM 281
++ M
Sbjct: 334 KLRDEM 339
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR---AGNLDA 168
SP + + + +P A + MK + P++L TL++ L R + ++
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ F++ G +P+V + ++I Y + + A + + M P+ TYN+++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
C G+ +A ++ +M+SRG PN YN LV G L EA VI M +
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS---YIAAGELEKA 204
PS T + ++G F +M P+++ ++ S Y ++ + +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++ F+ I G +PNV T+N +I G+C+ KF +A + M C+P+ + YNT++
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDT 252
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+L +A +++ M +G
Sbjct: 253 LCKKGRLGDARDLLMDMKSRG 273
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ LI C G+ A ++ + I+ K+F P Y ++ L G
Sbjct: 184 MVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIF---PTVVIYTILIRGLCG 240
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E +++ M + G P++ TYN +M ++ + + L EM G P+ T
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ IL+ L K D+ ++A L M G P++ + L+DG +AGNL E+
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+PDV Y+++I +E+A L M KG LPN TYN++I G+C G +
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + +M +G PN + ++TL+ AGK+ A + MV KG
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKG 468
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 129/277 (46%), Gaps = 3/277 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T F +LI E+GL + + + K + P + N +L L+ ++ + VY
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVY 181
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M G +P+++TY ++ R G + RL DEM P Y IL+ L
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A ++ M+ G P++ + T+MDG + ++ + EM G +P+VV +
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTF 301
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I E+ A+ M + G +PN+F YN +I G+C AG EA ++ E+E
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y+ L+ L ++ EA +++ M +KG
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKG 398
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M+ G P+I YN ++ + G L + L E+ + PD TY+IL+ L D+
Sbjct: 324 MASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDR 383
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A LL MK+ GF P+ + + TL+DG + GN++ +M KG P+++ ++
Sbjct: 384 MEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFST 443
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I Y AG++E A L+ M+ KG LP+V Y ++I G G EA + KEM+ G
Sbjct: 444 LIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAG 503
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEA 274
+PN + L+ L G++++A
Sbjct: 504 LHPNVFTLSCLIDGLCKDGRISDA 527
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 103/247 (41%), Gaps = 13/247 (5%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P +YN ++ + V QM+++G P+I+T++ ++ + GK++
Sbjct: 399 FLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAM 458
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L EM G PD Y L+ K A L M+E G P+V + L+DGL
Sbjct: 459 GLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGL 518
Query: 161 SRAGNL-DACKYFF------------DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
+ G + DA K F +E+ C P+ V YT +I G + KA
Sbjct: 519 CKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKF 578
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F M G P+VFT +I+G A + + ++ G PN VY L
Sbjct: 579 FSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEE 638
Query: 268 AGKLAEA 274
+G L A
Sbjct: 639 SGYLKSA 645
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 19/259 (7%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+N LI C G + A + K ++ P +Y+ ++ L G+ + + + +
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEIL---PDVFTYSILIKGLCGVDRMEEADGLL 391
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+M +G+ P+ +TYN ++ + G +++ + +M G P+ T++ L+ K
Sbjct: 392 QEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKA 451
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K AA+ L M G P V+ +T L+DG + GN EM G P+V
Sbjct: 452 GKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTL 511
Query: 189 TVMITSYIAAGELEKAQDLF---DGMITKGQ----------LPNVFTYNSMIRGFCMAGK 235
+ +I G + A LF G T G PN Y ++I+G C G+
Sbjct: 512 SCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGR 571
Query: 236 FDEACTMMKEMESRGCNPN 254
+A +M G P+
Sbjct: 572 IFKASKFFSDMRCSGLRPD 590
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 21/247 (8%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC-AKYRLGKLD-QFHRLLDE 105
Y+AI+H L G + Y L +++ C K R ++ +L
Sbjct: 73 YSAIIHVLTGAKLYA--------------KARCLMRDLIQCLQKSRRSRICCSVFNVLSR 118
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ S F+P+ + +L+ + AL + M + P++ ++DGL + G
Sbjct: 119 LESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGR 173
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
D + +M +G P+VV Y +I G+ KA LFD MI K P V Y
Sbjct: 174 FDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTI 233
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+IRG C + EA +M + M + G PN YNT++ + +A E+ M+ G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG 293
Query: 286 KYIHLVS 292
++V+
Sbjct: 294 LLPNVVT 300
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 107/267 (40%), Gaps = 31/267 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSY--NAI 51
M + GF A T+N LI C G + + ++ E+ I+ + F + Y
Sbjct: 394 MKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGK 453
Query: 52 LHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+ A +G+ Y +M +G PD++ Y ++ ++ G + RL EM +G
Sbjct: 454 MEAAMGL---------YTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLL-------------NHMKEVGFDPSVLHFTTLMD 158
P+ T + L+ L K + A+ L N + P+ + +T L+
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL G + FF +M G PDV V+I + A L L ++ G +P
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKE 245
N Y + +G+ +G A + E
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALSFCGE 651
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 21/174 (12%)
Query: 127 KGD-KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
KGD +P AL L M+ P ++ T + + G LD ++ + ++G D+
Sbjct: 725 KGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDL 784
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+I Y GE+ A+ LFDG Q +V T+ SMI G + G+ +EA + E
Sbjct: 785 CLNNSLINMYSKCGEIGTARRLFDGT----QKKDVTTWTSMIVGHALHGQAEEALQLFTE 840
Query: 246 M----------------ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
M ES PN + + ++ +AG + E + R M E
Sbjct: 841 MKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKE 894
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 83/232 (35%), Gaps = 56/232 (24%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++QM + PDI+T + + A LG LD MG H Y
Sbjct: 736 LFRQMQMDDXQPDIVTVTVALSACADLGALD--------MGEW-----IHAY-------- 774
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
++ G D + +L++ S+ G + + FD K DV
Sbjct: 775 --------------IRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKK----DVT 816
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQ----------------LPNVFTYNSMIRGF 230
+T MI + G+ E+A LF M + LPN T+ ++
Sbjct: 817 TWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMAC 876
Query: 231 CMAGKFDEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
AG +E + M E P + +V L AG L EA+E I M
Sbjct: 877 SHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM 928
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 136/269 (50%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C CG++ A ++ + I + +P Y I+ L+ +++ + M D+G
Sbjct: 452 LCHCGDLTRANELFQEMIS---WGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGL 508
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD+ YN V+ + GK+++ L EM G P+ +TY +H + + AA
Sbjct: 509 SPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
M + G P+ + T L+DG + GN F M ++G +PDV ++V+I
Sbjct: 569 SFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLS 628
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G+L++A +F ++ KG +P+VFTY S+I C G A + +M +G NPN +
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L++ L G++A+A E+ + EKG
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPEKG 717
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G +N +I C G++ + + I L +P +Y A +H
Sbjct: 503 MKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGL---KPNVYTYGAFIHGYCR 559
Query: 58 IRQYKLIEWVYQQMSDEGYAP-DILTYNIV--MCAKYRLGK-LDQFHRLLDEMGRSGFSP 113
+ + E + +M D G AP D++ +++ C K +F +LD+ G P
Sbjct: 560 AGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQ----GVLP 615
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D T+++L+H L K K A+ + + + + G P V +T+L+ L + G+L A
Sbjct: 616 DVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELH 675
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M KG P++V Y +I GE+ KA++LFDG+ KG N TY+++I G+C +
Sbjct: 676 DDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKS 735
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + M+ G P+ VY L+ AG +A + MVE+G
Sbjct: 736 ANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG 787
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
++G A +V E K+ F +Y A++H L I + E ++ +M+ G PDI
Sbjct: 352 DIGGAFQVKEEMFARKI-KLNTF--TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
TYN ++ Y++ +++ + LL E+ + + + + +++ L A L M
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G P+++ +TT++ GL + G + M ++G PDV CY +I + AG++
Sbjct: 469 ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM 528
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E+ + MI KG PNV+TY + I G+C AG+ A EM G PN ++ L
Sbjct: 529 EEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDL 588
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ G +A R M+++G
Sbjct: 589 IDGYCKDGNTTKAFAKFRCMLDQG 612
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 119/266 (44%), Gaps = 1/266 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F ILI + G + V F+ +K F N++ LL + +L VY+ M
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
PD+ TY ++ A R+GK+++ +L +M G P+ TY++++ L +
Sbjct: 226 G-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL L M G P + TL+DG R K DEM G PD V YT +I
Sbjct: 285 EALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
++ ++ A + + M + N FTY ++I G C G ++A + EM G
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVI 278
P+ YN L+ + +A+E++
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELL 430
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 125/309 (40%), Gaps = 70/309 (22%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y +++A + + + + V M ++G P+++TY++V+ R G +D+ L M
Sbjct: 234 TYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSM 293
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG------- 159
G PD + Y L+ + + ++L+ M +G P + +T L++G
Sbjct: 294 ANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDI 353
Query: 160 ----------------------------LSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L + G+L+ + F EM G PD+ Y +
Sbjct: 354 GGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCL 413
Query: 192 ITSYIAA-----------------------------------GELEKAQDLFDGMITKGQ 216
I Y G+L +A +LF MI+ G
Sbjct: 414 IEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGL 473
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
PN+ Y ++++G G+F+EA ++ M+ +G +P+ YNT++ AGK+ E
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533
Query: 277 VIRHMVEKG 285
+ M+ KG
Sbjct: 534 YLVEMIAKG 542
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 133/288 (46%), Gaps = 7/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G T+ LI C G++ A ++ + K + P +YNA+++ L
Sbjct: 643 LLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGI---NPNIVTYNALINGLCK 699
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ + ++G A + +TY+ ++ + L + +L M G PD
Sbjct: 700 LGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFV 759
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K AL+L M E G S F L+DG + G L ++M
Sbjct: 760 YCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMV 818
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P+ V YT++I + G +++A+ LF M + +PNV TY S++ G+ G+
Sbjct: 819 DNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRS 878
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E ++ EM +RG P+ L ++ +V G +A +++ M+ +G
Sbjct: 879 EMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEG 926
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 126/279 (45%), Gaps = 21/279 (7%)
Query: 6 FPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
F TF+IL +C G G A V+ER I ++ N + IL +++
Sbjct: 103 FSQNLSTFSILSLILCNSGLFGNAANVLERMIDTR--------NPHVKILDSIIK----- 149
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
Y++++ + ++ + I++ + G L++ + + F N L
Sbjct: 150 ----CYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLS 205
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L KG++ + M P V +T L++ R G ++ K+ +M KGC+
Sbjct: 206 KDLLKGNRVELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCI 264
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P++V Y+V+I AG++++A +L M KG LP+ + Y ++I GFC + E +M
Sbjct: 265 PNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSM 324
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ EM + G P+ + Y L++ + A +V M
Sbjct: 325 LDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM 363
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 80/173 (46%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
PD +TY L++ + K ++L M+E G P+++ ++ ++ GL RAG++D
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
MANKG +PD Y +I + + + + D M T G P+ Y ++I GF
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +EM +R N Y L+ L G L +A ++ M G
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 11/297 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNS--YNAILHAL 55
M + G T+N LI C GE+ AR++ + + L +NS Y+ I+
Sbjct: 678 MCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLA-----RNSVTYSTIIAGY 732
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ M G PD Y ++ + G ++ L M G +
Sbjct: 733 CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST- 791
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+N L+ K K + A L+ M + P+ + +T L++ GN+ + F E
Sbjct: 792 PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFME 851
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + MP+V+ YT ++ Y G + LFD M+ +G P+ ++ M+ G
Sbjct: 852 MQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGN 911
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +A ++ +M S G N +Y L+ L L+E +V+ + ++G + L +
Sbjct: 912 WIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLAT 968
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 55/104 (52%)
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+PDV YT +I +Y G++E+ + + M KG +PN+ TY+ +I G C AG DEA
Sbjct: 229 VPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE 288
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M ++G P+ +Y TL+ + E ++ M G
Sbjct: 289 LKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMG 332
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LG--IRQ 60
G P + + LI C + G K + F+ + ++NA++ LG I
Sbjct: 752 GVPPDSFVYCALIDGCCKAGNTEKALSLFL-GMVEEGIASTPAFNALIDGFFKLGKLIEA 810
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y+L+E M D P+ +TY I++ +G + + +L EM + P+ TY
Sbjct: 811 YQLVE----DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTS 866
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH + + +L + M G P L ++ ++D + GN D+M ++G
Sbjct: 867 LLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEG 926
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
YT++I + L + + D + +G ++ T +++ F AG+ DEA
Sbjct: 927 VNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEAL 986
Query: 241 TMMKEM 246
+++ M
Sbjct: 987 RVLESM 992
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 6/180 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++N T+ ILI CT G + A ++ F++ + N P +Y ++LH
Sbjct: 817 MVDNHITPNHVTYTILIEYHCTVGNIKEAEQL---FMEMQKRNVMPNVLTYTSLLHGYNR 873
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++ +M G PD L +++++ A + G + +L+D+M G + +
Sbjct: 874 IGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNL 933
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ L K + L +L+ +++ G S+ TL+ RAG D + M
Sbjct: 934 YTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 146/291 (50%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GF T+N LI C G +G A + ++ + N + + N IL L
Sbjct: 409 MEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK---NMKMDSVTLNTILRTL-- 463
Query: 58 IRQYKLIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
R+ KL E Y+ +S GY D ++Y ++ ++ G +D+ +L DEM P
Sbjct: 464 CREKKL-EEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN ++ L + K A++ LN + E G P + T++ G R G+++ F +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M PDV +++ G LEKA LF+ ++KG+ + TYN++I C G
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEG 642
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ D+A ++ EME + P+ YN +++ L ++G++ EA E + M+EKG
Sbjct: 643 RLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
I+ G TFNI+I + VE +N P +YN IL AL +
Sbjct: 200 IKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRL 259
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ M G P+ TYNI++ ++G L + +++ M ++ PD TYN+L
Sbjct: 260 GDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNML 319
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ L + A L + M+ + P V+ + TL++G + +EM+ KG
Sbjct: 320 INGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGV 379
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ V + +M+ Y G+++ A + M G P+ TYN++I G+C AG EA
Sbjct: 380 KPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFR 439
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M EM + + + NT++ L KL EA++++ ++G +I VS
Sbjct: 440 TMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVS 490
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 138/321 (42%), Gaps = 41/321 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+NIL+ C G + A V+E ++ L P +YN +++ L
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL---PDVWTYNMLINGLCN 325
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M + PD+++YN ++ K+ + +LL+EM G P+ T
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NI++ K K A N + M+E GF P + + TL++G +AGN+ DEM
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445
Query: 178 NK-----------------------------------GCMPDVVCYTVMITSYIAAGELE 202
K G D V Y +I Y G ++
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L+D M K +P+ TYN +I G C GK ++A + + E+ G P+ YNT++
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
G + +A + MVE
Sbjct: 566 HGYCREGDVEKAFQFHNKMVE 586
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M + G++PD +TYN ++ + G + + R +DEMGR D T N +L L +
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A LL+ ++ G+ + + TL+ G + GN+D +DEM K +P V Y
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYN 527
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G+ E+A + ++ G LP+ TYN+++ G+C G ++A +M
Sbjct: 528 CIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ N L+ L G L +A ++ V KGK I V+
Sbjct: 588 SFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVT 630
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 87/187 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M ++ P +TYN ++ + GK +Q L+E+ SG PD TYN +LH
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYC 569
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A N M E F P V L+ GL G L+ F+ +KG D V
Sbjct: 570 REGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTV 629
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +ITS G L+ A +L M K P+ +TYN++I +G+ EA M +M
Sbjct: 630 TYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Query: 247 ESRGCNP 253
+G P
Sbjct: 690 LEKGXLP 696
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F+ R F ++ + +L + R++ L + + S P + + A + G+
Sbjct: 99 FSHRKFSDAKSLLLGFIATDRRHDLHLSILRLTS-----PSKALLDTAIGAYVQSGQPHH 153
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA---ALNLLNHMKEVGFDPSVLHFTT 155
++ +M R P+ T N LL+ L + + + N ++G P+V F
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNI 213
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++ G F + M C PD V Y ++ + G L A+DL M ++G
Sbjct: 214 VIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRG 273
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
LPN TYN ++ G+C G EA +++ M P+ YN L++ L N G++ EA
Sbjct: 274 LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAF 333
Query: 276 EVIRHM 281
++ M
Sbjct: 334 KLRDEM 339
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR---AGNLDA 168
SP + + + +P A + MK + P++L TL++ L R + ++
Sbjct: 132 SPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSF 191
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ F++ G +P+V + ++I Y + + A + + M P+ TYN+++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
C G+ +A ++ +M+SRG PN YN LV G L EA VI M +
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQ 306
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS---YIAAGELEKA 204
PS T + ++G F +M P+++ ++ S Y ++ + +
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFS 192
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++ F+ I G +PNV T+N +I G+C+ KF +A + M C+P+ + YNT++
Sbjct: 193 REAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDA 252
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+L +A +++ M +G
Sbjct: 253 LCKKGRLGDARDLLMDMKSRG 273
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/290 (31%), Positives = 142/290 (48%), Gaps = 16/290 (5%)
Query: 11 RTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
R+FNILI C GEV A +++ +R + + +F + L L R
Sbjct: 263 RSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSF--------SCLIGLFSTRGKMD 314
Query: 64 IEWVY-QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
Y ++M G PD + Y +V+ R G + + R+ DEM G PD TYN LL
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ L K + L A LLN MKE G P + FTTL+ G R GN + FD + ++
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y +I G+L KA +L+D M + PN TY+ +I C G+ +EA
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM S+G PN + YN+++ +G + + + ++ M++ L++
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 141/279 (50%), Gaps = 7/279 (2%)
Query: 6 FPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T N+LI G+V A +V+ L +P ++N++L L R++
Sbjct: 189 FPDVV-THNVLIDARFRAGDVDAAIALVDSMANKGL---KPGIVTFNSVLKGLCKHRRFD 244
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V++ M APD+ ++NI++ R+G++++ + EM + G +PD +++ L+
Sbjct: 245 KAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ K A L MK +G P + +T ++ G RAG++ DEM GC+
Sbjct: 305 GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL 364
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y ++ L A++L + M +G P++ T+ ++I G+C G F++A +
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + P+ + YN+L+ + G LA+A+E+ M
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDM 463
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 120/242 (49%), Gaps = 2/242 (0%)
Query: 46 NSY--NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
N+Y N ++H+ ++ + V +M PD++T+N+++ A++R G +D L+
Sbjct: 156 NAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALV 215
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D M G P T+N +L L K + A + M + P V F L+ G R
Sbjct: 216 DSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRV 275
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G ++ F+ EM +G PDVV ++ +I + G+++ A M G +P+ Y
Sbjct: 276 GEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIY 335
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+I GFC AG EA + EM GC P+ + YNTL++ L +L +A E++ M E
Sbjct: 336 TMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKE 395
Query: 284 KG 285
+G
Sbjct: 396 RG 397
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 11/279 (3%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI--EWVYQQMSDEG 75
C G + A +V + + P +YN +L+ L +Q++L+ E + +M + G
Sbjct: 343 CRAGSMSEALRVRDEMVG---LGCLPDVVTYNTLLNGL--CKQHRLLDAEELLNEMKERG 397
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
PD+ T+ ++ R G ++ +L D + PD YN L+ + + A
Sbjct: 398 VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKAN 457
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L + M P+ + ++ L+D G ++ F DEM +KG +P+++ Y +I Y
Sbjct: 458 ELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGY 517
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G ++K Q M+ LP++ T+N++I G+ A + ME P+
Sbjct: 518 CRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDA 577
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHM----VEKGKYIHL 290
+ YN +++ G + EA V + M +E +Y ++
Sbjct: 578 VTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYM 616
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 104/208 (50%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++ YN ++ R G L + + L D+M P+ TY+IL+ + + A
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M G P+++ + +++ G R+GN+ + F +M +PD++ + +I YI
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ A ++F+ M + P+ TYN +I GF G +EA + K+M + G P+
Sbjct: 555 EENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYT 614
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y +L++ AG EA ++ M+ +G
Sbjct: 615 YMSLINGHVTAGNSKEAFQLHDEMMHRG 642
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TF LI C G A ++ + + +L RP +YN+++ +
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL---RPDVVAYNSLIDGMCR 449
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ M P+ +TY+I++ + G++++ LDEM G P+ T
Sbjct: 450 KGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMT 509
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ + L M + P ++ F TL+ G + N+ F+ M
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIME 569
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PD V Y ++I + G +E+A +F M G P+ +TY S+I G AG
Sbjct: 570 KEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSK 629
Query: 238 EACTMMKEMESRGCNPN 254
EA + EM RG P+
Sbjct: 630 EAFQLHDEMMHRGFAPD 646
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 64/127 (50%)
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
D EM + PDVV + V+I + AG+++ A L D M KG P + T+NS
Sbjct: 173 FDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS 232
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++G C +FD+A + + M+ P+ +N L+ G++ EA + + M ++G
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292
Query: 286 KYIHLVS 292
+VS
Sbjct: 293 VTPDVVS 299
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 138/282 (48%), Gaps = 6/282 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI GF T+ LI C G A +++ ++ N +P +YN I+ +L
Sbjct: 157 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK---NCQPNVFAYNTIIDSLCK 213
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
RQ ++ +M +G +PDI TYN ++ A L + LL+EM S PD +
Sbjct: 214 DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVS 273
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ L K K A ++++ M + G +P+V+ +T LMDG +D FD M
Sbjct: 274 FNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGCMP+V+ Y +I Y ++KA LF M + +P+ TY+++I G C +
Sbjct: 334 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 393
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+A + EM + PN + Y L+ L LAEA +++
Sbjct: 394 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK 435
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 130/250 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N +L ++ ++ + + + QM G P+I T +I++ + L ++ +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ + K AL+L + M GF P V+ + TL++GL +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M K C P+V Y +I S ++ +A +LF M+TKG P++FT
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I C ++ T++ EM P+ + +NT+V L GK+ EAH+V+ M+
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 283 EKGKYIHLVS 292
++G ++V+
Sbjct: 299 QRGVEPNVVT 308
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 7/289 (2%)
Query: 7 PTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P TA TF LI G++G A + ++ I FRP +Y +++ L +
Sbjct: 129 PDTA-TFTTLIRGIYVEGKIGEALHLFDKMIGE---GFRPDVVTYGTLINGLCKVGNTSA 184
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ M + P++ YN ++ + + ++ + L EM G SPD TYN L+H
Sbjct: 185 AIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + LLN M + P V+ F T++D L + G + D+M +G P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+VV YT ++ + E+++A +FD M+ KG +PNV +YN++I G+C + D+A +
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 364
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM + P+ + Y+TL+ L + +L +A + MV + +LV+
Sbjct: 365 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 137/306 (44%), Gaps = 15/306 (4%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T +ILI C VG A V+ + +K +P ++ ++ + +
Sbjct: 91 GIPPNIYTLHILINSFCHLNRVGFAFSVLAKILK---LGHQPDTATFTTLIRGIYVEGKI 147
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M EG+ PD++TY ++ ++G RLL M + P+ YN +
Sbjct: 148 GEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTI 207
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A NL + M G P + + +L+ L +EM +
Sbjct: 208 IDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKI 267
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPDVV + ++ + G++ +A D+ D MI +G PNV TY +++ G C+ + DEA
Sbjct: 268 MPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVK 327
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA---------HEVIRHMVEKGKYIHLVS 292
+ M +GC PN + YNTL++ ++ +A E+I V IH +
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 387
Query: 293 KFKRYK 298
+R +
Sbjct: 388 HVERLQ 393
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++ +FN ++ C G+V A VV++ I+ + P +Y A++
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV---EPNVVTYTALMDGHCL 318
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V+ M +G P++++YN ++ ++ ++D+ L EM R PD T
Sbjct: 319 LSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 378
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+H L ++ A+ L + M P+++ + L+D L + L +
Sbjct: 379 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 438
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ + I AGELE A+DLF + +KG P+V+TY+ MI G C G D
Sbjct: 439 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 498
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +EM+ GC N +YNT+ + + A ++++ MV +G
Sbjct: 499 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARG 546
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ L+ C E+ A KV + + P SYN +++
Sbjct: 297 MIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM---PNVISYNTLINGYCK 353
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ +++ +M + PD +TY+ ++ + +L L EM P+ T
Sbjct: 354 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 413
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ LL ++ DP + +DG+ RAG L+A + F ++
Sbjct: 414 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 473
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PDV Y++MI G L++A LF M G N YN++ RGF +
Sbjct: 474 SKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 533
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A +++EM +RG + + V L + G +++R V+
Sbjct: 534 RAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A++ N M + PS + F L+ +++ + +M + G P++ ++I
Sbjct: 44 GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
S+ + A + ++ G P+ T+ ++IRG + GK EA + +M G
Sbjct: 104 NSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFR 163
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL++ L G + A ++ MV+K
Sbjct: 164 PDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 195
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Query: 135 LNLLNHMKEVG---FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L+LL H + F LHF T+ +S F+ M P V + +
Sbjct: 18 LSLLAHFLSLSHNRFHSKSLHFNTIDGAISS----------FNRMLRMQPPPSTVDFNKL 67
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+TS L M + G PN++T + +I FC + A +++ ++ G
Sbjct: 68 LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGH 127
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + TL+ + GK+ EA + M+ +G
Sbjct: 128 QPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 3/278 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T T+ + GEV R + E K F F P SY+ ++H L Q + +
Sbjct: 526 TLLNTYMDCVFKAGEVEKGRAIFEDM---KSFGFLPDVRSYSILIHGLTKAGQARETSNI 582
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+Q MS +G+A D YN V+ + GK+D+ + +L+EM P TY ++ L K
Sbjct: 583 FQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK 642
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D+ A L K G + +V+ +++L+DG + G +D +EM KG P+V
Sbjct: 643 IDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 702
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++ + + E+++A F M PN +TY+ +I G C K+++A +EM+
Sbjct: 703 WNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ 762
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN + Y T++S L G + +A+ + G
Sbjct: 763 KQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNG 800
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 146/292 (50%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF AR +N ++ C G+V A +V+E K+ + P +Y +I+ L
Sbjct: 586 MSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEM---KVKHVHPTVATYGSIVDGLAK 642
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +L+EM + G +P+ +T
Sbjct: 643 IDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 702
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L K ++ AL MKE+ P+ ++ L++GL R + F+ EM
Sbjct: 703 WNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ 762
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VV YT MI+ G + A LF+ T G +P+ ++N++I G A +
Sbjct: 763 KQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPM 822
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
EA + +E RGC N +L+ L L +A V + E K H
Sbjct: 823 EAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSEIAKSQH 874
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++YNA+L L +E V ++MS GY ++ R +L+ R++
Sbjct: 109 DAYNAVLPFL--SHDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGA 166
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M F P F Y +L+ L + +P AL LL M++VG++ SV FTTL+ L+R G
Sbjct: 167 MRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQ 226
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
++ DE+ PD+V Y V I + AG ++ A F + G P+ +Y S
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTS 286
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ C AG+ EA + +ME+ P YNT++ +A + +A++++ + E+G
Sbjct: 287 MVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERG 346
Query: 286 KYIHLVS 292
+VS
Sbjct: 347 CIPSVVS 353
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 108/217 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M G PD+ N M ++ G++++ + ++M GF PD +Y+IL+H L
Sbjct: 512 IYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLT 571
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + N+ M + GF + ++DGL ++G +D +EM K P V
Sbjct: 572 KAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVA 631
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ L++A LF+ +KG NV Y+S+I GF G+ DEA +++EM
Sbjct: 632 TYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEM 691
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+G PN +N+L+ L ++ EA + M E
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKE 728
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 116/226 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M G+ PD+ +Y+I++ + G+ + + M + GF+ D YN ++ L
Sbjct: 547 IFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLC 606
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A +L MK P+V + +++DGL++ LD F+E +KG +V+
Sbjct: 607 KSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVI 666
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + G +++A + + M+ KG PNV+T+NS++ + DEA + M
Sbjct: 667 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSM 726
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ C+PN Y+ L++ L K +A + M ++G ++V+
Sbjct: 727 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVT 772
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N+ I G+ G + F + K RP SY +++ L + E ++ QM
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
E P YN ++ + D ++LL+ + G P ++N +L LGK K
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 368
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL L + MK+ P++ + ++D L AG ++ DEM G P+++ +M+
Sbjct: 369 EALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMV 427
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A +LE+A +F+ +G PN TY S+I G GK D+A + ++M G +
Sbjct: 428 DRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHD 487
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N ++Y +L+ N G+ + H++ + M+ +G
Sbjct: 488 ANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRG 520
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 34/281 (12%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
FRP ++Y ++ AL RQ + + +QM D GY + + ++ A R G+++
Sbjct: 170 LKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEP 229
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L+DE+ S PD YN+ + GK A + +K G P + +T+++
Sbjct: 230 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVW 289
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L +AG L + F +M + +P Y MI Y +A + A L + + +G +P
Sbjct: 290 VLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIP 349
Query: 219 NVF----------------------------------TYNSMIRGFCMAGKFDEACTMMK 244
+V TYN +I CMAG+ +EA +
Sbjct: 350 SVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRD 409
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EME G PN L N +V L A +L EAH + E+G
Sbjct: 410 EMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERG 450
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 140/292 (47%), Gaps = 13/292 (4%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNF-----RPFKNSYNAILHALLG 57
E G + +FN I TC +G RKV E LF+ +P ++YN I+ L
Sbjct: 344 ERGCIPSVVSFNS-ILTC--LGKKRKVDEALT---LFDVMKKDAKPNISTYNIIIDMLCM 397
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G P++L+ NI++ + +L++ HR+ + G +P+ T
Sbjct: 398 AGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVT 457
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ LGK K A L M + G D + + +T+L+ G + + EM
Sbjct: 458 YCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMI 517
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD+ + AGE+EK + +F+ M + G LP+V +Y+ +I G AG+
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
E + + M +G + YN +V L +GK+ +A+EV+ M K K++H
Sbjct: 578 ETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEM--KVKHVH 627
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NI+I C G V A K+ + + LF P S N ++ L Q + ++
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLF---PNLLSVNIMVDRLCKANQLEEAHRIF 443
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ S+ G P+ +TY ++ + GK+D +RL ++M +G + Y L+
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMH 503
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + M G P + T MD + +AG ++ + F++M + G +PDV Y
Sbjct: 504 GRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSY 563
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I AG+ + ++F M +G + YN+++ G C +GK D+A +++EM+
Sbjct: 564 SILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKV 623
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ +P Y ++V L +L EA+ + KG ++++
Sbjct: 624 KHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVI 666
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 135/246 (54%), Gaps = 2/246 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F+P N YN L+AL+ + KL+E ++ +M +EG D+ T+N+++ A + +L
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAI 178
Query: 101 RLLDEMGRSGFSPDFHTYNILLH-VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L+EM G PD T+ L+ + +GD AL + M G + + L++G
Sbjct: 179 LMLEEMANHGLKPDEITFTTLMQGFIEEGDLN-GALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ G ++ F E++ +G PD V + ++ + G + A D+ D MI KG P+
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V+TYNS+I G C G+F++A ++++M R C+PN + YNTL+S L ++ A ++ R
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357
Query: 280 HMVEKG 285
+V KG
Sbjct: 358 ILVSKG 363
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE GF T+N LI ++G K +E + L P +YN ++ AL +
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENE 348
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + + +G PD+ T+N ++ D + +EM G PD TY+I
Sbjct: 349 IEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSI 408
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + AL LL M+ G + + + TL+DGL ++ ++ + FD+M G
Sbjct: 409 LIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLG 468
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
V Y +I +E+A L D MI +G P+ FTYNS++ FC G ++A
Sbjct: 469 VSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAG 528
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M S GC P+ Y TL+ L AG++ A +++R + KG
Sbjct: 529 DIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKG 573
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 126/245 (51%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P + ++N++++ I + M ++G+ PD+ TYN ++ +LG+ ++
Sbjct: 259 FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAI 318
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L +M SP+ TYN L+ L K ++ AA +L + G P V F TL+ GL
Sbjct: 319 EILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGL 378
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ N D F+EM NKGC PD Y+++I S L++A L M + G N
Sbjct: 379 CLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNA 438
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
YN++I G C + + ++A + +ME G + + + YNTL+ L ++ EA +++
Sbjct: 439 VVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQ 498
Query: 281 MVEKG 285
M+ +G
Sbjct: 499 MIMEG 503
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 114/212 (53%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++S+EG++PD +T+N ++ R+G ++ ++D M GF PD +TYN L+ + K
Sbjct: 253 EVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLG 312
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ +L M P+ + + TL+ L + ++A + +KG +PDV +
Sbjct: 313 EFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFN 372
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + + A ++F+ M KG P+ FTY+ +I C + EA ++KEMES
Sbjct: 373 TLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESS 432
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GC N +VYNTL+ L + ++ +A E+ M
Sbjct: 433 GCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM 464
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 136/282 (48%), Gaps = 7/282 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P T T+N LI C E+ A + + L P ++N ++ L + +
Sbjct: 331 PNTV-TYNTLISALCKENEIEAATDLARILVSKGLL---PDVCTFNTLIQGLCLSKNQDI 386
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++++M ++G PD TY+I++ + +L + LL EM SG + + YN L+
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLID 446
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K + A + + M+ +G S + + TL+DGL + ++ D+M +G P
Sbjct: 447 GLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKP 506
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D Y ++T + G++EKA D+ M + G P++FTY ++I G C AG+ D A ++
Sbjct: 507 DKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLL 566
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ +G YN ++ L + E + R M+EK
Sbjct: 567 RSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKS 608
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 1/220 (0%)
Query: 64 IEWVYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
IE + + + +E G+ PD YNI + A KL L +M G D T+N+L+
Sbjct: 106 IENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLI 165
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K + A+ +L M G P + FTTLM G G+L+ +M GC+
Sbjct: 166 KALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCL 225
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
V V++ + G +E+A + +G P+ T+NS++ GFC G ++A +
Sbjct: 226 LTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDI 285
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ M +G +P+ YN+L+S + G+ +A E+++ M+
Sbjct: 286 VDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 111/236 (47%), Gaps = 2/236 (0%)
Query: 50 AILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS 109
+L L + I + +Q+ G P+ T+ ++ + +++ ++L+
Sbjct: 60 TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NEL 117
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
GF PD + YNI L+ L + +K L + M G V F L+ L +A L
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+EMAN G PD + +T ++ +I G+L A + M+ G L + ++ G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
FC G+ +EA + E+ G +P+ + +N+LV+ G + +A +++ M+EKG
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ G TFN LI C +A ++ E +K+K +P + +Y+ ++ +L
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE-MKNK--GCKPDEFTYSILIDSLCY 415
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ K + ++M G A + + YN ++ + +++ + D+M G S T
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K + A L++ M G P + +L+ R G+++ MA
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC PD+ Y +I AG ++ A L + KG + YN +I+ M +
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTK 595
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRN-AGKLAEAHEVIRHMVEKG 285
E + +EM + P+ L + + L N G + EA + M+EKG
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKG 644
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 9/265 (3%)
Query: 31 ERFIKSKLFNFRPFKNS--------YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
ER +K L + ++S YN ++ L R+ + E ++ QM G + +T
Sbjct: 416 ERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVT 475
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ + ++++ +L+D+M G PD TYN LL + A +++ M
Sbjct: 476 YNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMA 535
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G +P + + TL+ GL RAG +D + KG + Y +I + +
Sbjct: 536 SNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTK 595
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG-KFDEACTMMKEMESRGCNPNFLVYNTL 261
+ LF M+ K P+ T+ + RG C G EA EM +G P F + L
Sbjct: 596 EGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFL 655
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGK 286
L + E+I ++EK +
Sbjct: 656 AEGLCSLSMEDTLIELINMVMEKAQ 680
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 101/239 (42%), Gaps = 9/239 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G ++ T+N LI C V A +++++ I L +P K +YN++L +
Sbjct: 468 GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL---KPDKFTYNSLLTYFCRVGDI 524
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + Q M+ G PDI TY ++ R G++D +LL + G H YN +
Sbjct: 525 EKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPV 584
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEMANKG 180
+ L + + L M E P L + GL G + F EM KG
Sbjct: 585 IQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKG 644
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+P+ + + + + +L + ++ K Q+ T SMIRGF KF++A
Sbjct: 645 ILPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKIRKFNDA 701
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 73/157 (46%), Gaps = 4/157 (2%)
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK-GCMPDVVCYTVMITSY 195
LL +K G P+ F TL+ + N + + N+ G PD Y + + +
Sbjct: 77 LLKQLKSSGSIPNATTFATLIQSFT---NFHEIENLLKILENELGFKPDTNFYNIALNAL 133
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+ +L+ + L M+ +G + +V T+N +I+ C A + A M++EM + G P+
Sbjct: 134 VEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDE 193
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + TL+ G L A ++ + M+ G + VS
Sbjct: 194 ITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVS 230
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 150/297 (50%), Gaps = 6/297 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N +I +VG + +K F P + +Y +++ +G+ Q
Sbjct: 284 MVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLI---IGVCQ 340
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I+ ++++ +G P I+ YN ++ + G + + +L+++M + G SPD T
Sbjct: 341 DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWT 400
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN++++ L K A NLLN G+ P + F TL+DG + +D D M
Sbjct: 401 YNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMW 460
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PDV+ Y ++ A + E + F ++ KG LPN+ TYN +I C A K
Sbjct: 461 SHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVT 520
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
EA +++E+ +RG P+ + + T++S N G L EA+++ R M ++ + H V+ +
Sbjct: 521 EALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATY 577
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 133/307 (43%), Gaps = 42/307 (13%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G ++ V+ F + +N P SYNAI++ L+ + VY +M EG APD+
Sbjct: 87 GRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDV 146
Query: 81 LTYNI-----------------------------------VMCAKYRLGKLDQFHRLLDE 105
T+ I V+ Y + + L ++
Sbjct: 147 CTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNK 206
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M R G P T+N L+H+L K LLN + + G P++ F + GL R G
Sbjct: 207 MLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGV 266
Query: 166 LDA-------CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L+ + + +M NKG PD Y +I Y G+++ A + KG +P
Sbjct: 267 LEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVP 326
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ FTY S+I G C G D A + +E +G P+ ++YNTL+ L G + +A +++
Sbjct: 327 DEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLM 386
Query: 279 RHMVEKG 285
M ++G
Sbjct: 387 NDMSKEG 393
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 122/297 (41%), Gaps = 42/297 (14%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F K P ++N ++H L + E + ++ G P++ T+NI +
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261
Query: 91 YRLGKLD-------QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
R G L+ + L +M G PD TYN +++ K K A +L K
Sbjct: 262 CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKF 321
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
GF P + +L+ G+ + G++D F+E KG P +V Y +I G + K
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK 381
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAG----------------------------- 234
A L + M +G P+++TYN +I G C G
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441
Query: 235 ------KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K D A ++ M S G P+ + YN++++ L A K + E + ++EKG
Sbjct: 442 GYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKG 498
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 9/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N++I C G V A ++ I + P ++N ++
Sbjct: 389 MSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAK---GYLPDIFTFNTLIDGYCK 445
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD++TYN ++ + K + + G P+ T
Sbjct: 446 RLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIIT 505
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K K AL+LL ++ G P + F T++ G G+LD F M
Sbjct: 506 YNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME 565
Query: 178 NK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ V Y +MI ++ +++ AQ LF M KG P+ +TY MI GFC G
Sbjct: 566 QQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNV 625
Query: 237 DEACT-MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++KE+E G P+ + +++ L ++ EA ++ MV G
Sbjct: 626 NSGYDFLLKEIEI-GFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTG 674
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 3/215 (1%)
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+L ++ KY+ L GF F TY ++ LG + A +L
Sbjct: 5 LLPKHVAAVLKYQKDPLKALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLM 64
Query: 140 HMKEVGFDPSVLH--FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
M+ + D S+L + + M R G + F+ M C P + Y ++ +
Sbjct: 65 EMR-LNVDNSLLEGVYVSAMRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVE 123
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +A ++ M +G P+V T+ I+ FC + A ++ M S+GC N +V
Sbjct: 124 YGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVV 183
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y T++S EA+E+ M+ G + H+ +
Sbjct: 184 YCTVISGFYEENYQVEAYELFNKMLRLGIFPHIAT 218
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 43/256 (16%)
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH-TYNILLHVLGKGDKP 131
++G+ LTY ++ G+ D R+L EM + + Y + G+ K
Sbjct: 33 EDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKGKV 92
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+++ M +PS+ + +M+ L G + + M ++G PDV +T+
Sbjct: 93 QEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIR 152
Query: 192 ITSY------------------------------IAAGELE-----KAQDLFDGMITKGQ 216
I S+ + +G E +A +LF+ M+ G
Sbjct: 153 IKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI 212
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG------- 269
P++ T+N ++ C G E ++ ++ G PN +N + L G
Sbjct: 213 FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANS 272
Query: 270 KLAEAHEVIRHMVEKG 285
K+ EA + MV KG
Sbjct: 273 KVVEAENYLHKMVNKG 288
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 116/227 (51%), Gaps = 1/227 (0%)
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R K +E V+ M G PD + YN+++ + GK+D+ LL++M R G PD TY
Sbjct: 350 RAAKALE-VFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTY 408
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI++ VL + A + MK P V+ + TL++GL + D FDEM
Sbjct: 409 NIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQA 468
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
CMPD+ + +I + AG +E A + ++ G PN + YN++I GFC +G+ D+
Sbjct: 469 NKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDK 528
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M C P+ + Y LV G + A E+++ MV +G
Sbjct: 529 GYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREG 575
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 123/258 (47%), Gaps = 1/258 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N+LI G+ G + +E P +YN ++ L +Y+ + M
Sbjct: 373 YNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMK 432
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
++PD++TYN ++ +L + D+ L DEM + PD T+ L+ L K +
Sbjct: 433 RRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRME 492
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL + ++G P+ + L+ G R+G +D F +M C PD + YT+++
Sbjct: 493 DALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILV 552
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G A +L M+ +G P + TYN +IR MAG+ ++A T+ KEM ++G N
Sbjct: 553 LGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFN 612
Query: 253 PNFLVYNTLVSNLRNAGK 270
P+ Y+ L NL K
Sbjct: 613 PDMQTYSAL-PNLSTPNK 629
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 4/276 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV--YQ 69
T++ L+ G+ G A K +E F + P YN +L + LG +Q K+ E + +
Sbjct: 337 TYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYN-VLISCLG-KQGKVDEALELLE 394
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M+ +G PD TYNIV+ G+ ++ + M R SPD TYN LL+ L K
Sbjct: 395 DMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLR 454
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A +L + M+ P + F TL+D L++AG ++ + G P+ Y
Sbjct: 455 RTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYN 514
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I+ + +G+++K +LF MI P+ TY ++ GF G A +++EM
Sbjct: 515 ALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVRE 574
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P YN L+ +L AG++ +A+ + + M+ KG
Sbjct: 575 GHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 610
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 7/256 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ + + +++ + PD+ TYN+++ A + +L++ L E
Sbjct: 268 NYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEA 326
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G D TY+ L+ GK + AL + +M++ G P + + L+ L + G +
Sbjct: 327 EQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKV 386
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D ++M KG MPD Y ++I + G EKA F M + P+V TYN++
Sbjct: 387 DEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTL 446
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG- 285
+ G + DEAC + EM++ C P+ + TL+ L AG++ +A E +V+ G
Sbjct: 447 LNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGH 506
Query: 286 ---KYIH--LVSKFKR 296
YI+ L+S F R
Sbjct: 507 APNSYIYNALISGFCR 522
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 132/283 (46%), Gaps = 7/283 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G +A +N +I CG + A ++ E + + P +YN +L AL +Q
Sbjct: 260 DGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESV---PDVFTYN-LLIALCKSKQ 315
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++Q+ G D+ TY+ +M A + G+ + + M ++G PD YN+
Sbjct: 316 LEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNV 375
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LGK K AL LL M G P + ++D LS G + FF M +
Sbjct: 376 LISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRK 435
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y ++ ++A DLFD M +P++ T+ ++I AG+ ++A
Sbjct: 436 HSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL 495
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ G PN +YN L+S +G++ + +E+ + M+E
Sbjct: 496 EQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIE 538
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 125/319 (39%), Gaps = 74/319 (23%)
Query: 40 NF-RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDE-GYAPDILTYNIVMCAKYRLGK-- 95
NF +P ++ A +H L +R+ + ++ M + APD++ YN ++ + G
Sbjct: 83 NFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGD 142
Query: 96 --LDQFHRL--------------------------------LDEMGRSGFSPDFHTYNIL 121
LD F RL EM +G D + N L
Sbjct: 143 RALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTL 202
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H + A LL+HM + L++ RAG + F + + GC
Sbjct: 203 IHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGC 262
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
V Y +I +I G L +A LF+ +TK +P+VFTYN +I C + + +EA T
Sbjct: 263 ALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALT 321
Query: 242 MMKE-----------------------------------MESRGCNPNFLVYNTLVSNLR 266
+ +E M+ GC P+ +VYN L+S L
Sbjct: 322 LFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLG 381
Query: 267 NAGKLAEAHEVIRHMVEKG 285
GK+ EA E++ M KG
Sbjct: 382 KQGKVDEALELLEDMNRKG 400
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 3/181 (1%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
++G D HT ++ + K + LL +++ G S + T + RAG+LD
Sbjct: 11 KAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLD 70
Query: 168 ACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMI-TKGQLPNVFTYNS 225
A D+M C PD V +T + +E+A LFD M T P+V YN+
Sbjct: 71 AAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNT 130
Query: 226 MIRGFCMAGKFDEACTMMKEMESRG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I G+C AG D A M + ++ G C PN + ++TLV L + +A V + M+
Sbjct: 131 LIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGA 190
Query: 285 G 285
G
Sbjct: 191 G 191
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL H+ + G T ++ + + G + E+ KG V T I
Sbjct: 2 ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61
Query: 194 SYIAAGELEKAQDLFDGMITKGQL--PNVFTYNSMIRGFCMAGKFDEACTMMKEM-ESRG 250
++ AG+L+ A + D M +G P+ + + + C + ++A T+ +M E+
Sbjct: 62 AFGRAGDLDAAMGMLDDM-RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCD 120
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
C P+ + YNTL++ AG A ++ R + ++G
Sbjct: 121 CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGS 156
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 133/253 (52%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + + +L + V+ ++ G P ++++N +M +LG L++ RL + M
Sbjct: 139 FNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++AQDL D MI KG P+ TY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
E G Y ++++F
Sbjct: 379 PEIGTYTMIINEF 391
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 69/156 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G P++
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G P+V T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +M +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G P VV
Sbjct: 409 RDGYKPSVV 417
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 5/289 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T T+ ++ C G+ A ++ + ++ + P Y+AI+ +L
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M ++G PD+ TYN ++ G+ +LL EM SPD T
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + +++++DG + LDA ++ F MA
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+++ + +I Y A ++ +L M G + + TYN++I GF + G +
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +++EM S G P+ + +TL+ L + GKL +A E+ + M + K
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%), Gaps = 7/285 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FNILI C+C ++ A + K P ++ +LH L + +
Sbjct: 116 SFNILIKCFCSCSKLPFALSTFGKITK---LGLHPDVVTFTTLLHGLCVEDRVSEALDFF 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM + P+++T+ +M R G++ + LLD M G P TY ++ + K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 129 DKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
++ALNLL M+EV P+V+ ++ ++D L + G + F EM KG PD+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y MI + ++G A+ L M+ + P+V TYN++I F GKF EA + EM
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG PN + Y++++ +L A + M KG +L++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ G ++ + +M++ G D TYN ++ Y +G L+ LL EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-----------GFDPSVLHFTT 155
SG PD T + LL L K AL + M++ G +P V +
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ GL G + ++EM ++G +PD + Y+ MI L++A +FD M +K
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV T+ ++I G+C AG+ D+ + EM RG N + Y TL+ R G + A
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636
Query: 276 EVIRHMVEKGKYIHLVS 292
++ + M+ G Y ++
Sbjct: 637 DIFQEMISSGVYPDTIT 653
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 44/308 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + + ++ ++ + + L+ +YQ+M + DI ++NI++
Sbjct: 68 SDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSC 127
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+ LLH L D+ AL+ + M E P+V+ F
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTF 187
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG--------------------------------- 180
TTLM+GL R G + D M G
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 181 ---CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+P+VV Y+ +I S G AQ+LF M KG P++FTYNSMI GFC +G++
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A +++EM R +P+ + YN L++ GK EA E+ M+ +G Y ++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 292 SKFKRYKR 299
F + R
Sbjct: 368 DGFCKQNR 375
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN ++H + + Q+M G PDI+T + ++ GKL +
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 106 MGRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
M +S G PD TYNIL+ L K L A L M G P + ++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+++DGL + LD FD M +K P+VV +T +I Y AG ++ +LF M +
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G + N TY ++I GF G + A + +EM S G P+ + +++ L + +L A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 275 HEVIRHM 281
++ +
Sbjct: 671 VAMLEKL 677
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M E G T+N LI G++ A +++ I S L P + + +L L
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC---PDIVTCDTLLDGLCD 477
Query: 57 ------GIRQYKLIEWVYQQMSDE----GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ +K+++ + + G PD+ TYNI++ GK + L +EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + + M F P+V+ FTTL++G +AG +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + + + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G + A M+++++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQ 678
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%)
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + L+ L +M RS P + L+ V+ + ++P ++L M+ +
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
F L+ L F ++ G PDVV +T ++ + +A D F
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQ 174
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M PNV T+ +++ G C G+ EA ++ M G P + Y T+V + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 271 LAEAHEVIRHMVEKGKYI 288
A ++R M E I
Sbjct: 235 TVSALNLLRKMEEVSHII 252
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G TA TFN LI G ++ VE F + P SYN I++ L
Sbjct: 149 MFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGN 208
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+++M G PD++TYN ++ + + ++ L EM G P+ TYN
Sbjct: 209 TSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNC 268
Query: 121 LLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++H +LG+ ++ A L M P + T L+DGL + G + + F+ M
Sbjct: 269 MVHGFCILGQLNE---ATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMT 325
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P++ Y ++ Y + +A+ +F+ MI +G P V +YN +I GFC + + D
Sbjct: 326 EKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMD 385
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA +++ EM + NP+ + Y+TL+ L G+ EA + + M G +LV+
Sbjct: 386 EAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVT 440
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 120/246 (48%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N RP + L + +QY + + QM G ++ + N+++ RL +D
Sbjct: 83 NPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFA 142
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G P T+N L++ L K A+ L N M G +P+V+ + T+++G
Sbjct: 143 VSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + GN F +M GC PDVV Y +I S + A + M+ +G PN
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
VFTYN M+ GFC+ G+ +EA + KEM R P+ + LV L G ++EA V
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322
Query: 280 HMVEKG 285
M EKG
Sbjct: 323 TMTEKG 328
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 136/281 (48%), Gaps = 7/281 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P T T IL+ C G V AR V E + + P ++YNA++ R
Sbjct: 296 PDTV-TLTILVDGLCKEGMVSEARLVFETMTEKGV---EPNISTYNALMDGYCLQRLMNE 351
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ V++ M +G AP + +YNI++ + ++D+ LL EM +PD TY+ L+
Sbjct: 352 AKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQ 411
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + +P ALN+ M G P+++ ++ L+DG + G+LD M K P
Sbjct: 412 GLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEP 471
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
++V +T++I AG+LE A++LF + G P + TY MI+G G DEA +
Sbjct: 472 NIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLF 531
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ME G PN YN ++ + A +I MV K
Sbjct: 532 RKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGK 572
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 133/284 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G ++N +I + G V+ F K + +P +YN I+ +L R
Sbjct: 184 MVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRL 243
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+M D G P++ TYN ++ LG+L++ RL EM PD T I
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTI 303
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A + M E G +P++ + LMDG ++ K F+ M +G
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQG 363
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P V Y ++I + + +++A+ L M K P+ TY+++++G C G+ EA
Sbjct: 364 CAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ KEM S G PN + Y+ L+ G L EA ++++ M EK
Sbjct: 424 NIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEK 467
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + N+LI C V A ++ + K P +++NA+++ L +
Sbjct: 118 GVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFK---LGIHPTASTFNALINGLCNEGKI 174
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K ++ +M G+ P++++YN ++ + G + +M ++G PD TYN +
Sbjct: 175 KEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTI 234
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A+ L+ M + G P+V + ++ G G L+ F EM +
Sbjct: 235 IDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDV 294
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPD V T+++ G + +A+ +F+ M KG PN+ TYN+++ G+C+ +EA
Sbjct: 295 MPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKK 354
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M +GC P YN L++ + ++ EA ++ M K
Sbjct: 355 VFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKA 398
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 139/289 (48%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T+N ++ C G++ A ++ + + + P + ++ L
Sbjct: 254 MLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVM---PDTVTLTILVDGLCK 310
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL-DQFHRLLDEMGRSGFSPDFH 116
V++ M+++G P+I TYN +M Y L +L ++ ++ + M R G +P H
Sbjct: 311 EGMVSEARLVFETMTEKGVEPNISTYNALMDG-YCLQRLMNEAKKVFEIMIRQGCAPGVH 369
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+YNIL++ K + A +LL M +P + ++TLM GL + G F EM
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ G +P++V Y++++ + G L++A L M K PN+ + +I G +AGK
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A + ++ + G P Y ++ L G EA+++ R M + G
Sbjct: 490 EVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDG 538
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N L+ C + A+KV E I+ P +SYN +++
Sbjct: 324 MTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGC---APGVHSYNILINGFCK 380
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + + +M + PD +TY+ +M + G+ + + EM G P+ T
Sbjct: 381 SRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVT 440
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL K AL LL M+E +P+++H T L++G+ AG L+ K F ++
Sbjct: 441 YSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLF 500
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P + YTVMI + G ++A DLF M G LPN +YN MI+GF
Sbjct: 501 ADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSS 560
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
A ++ EM + + N + L+
Sbjct: 561 TAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DA F+ M P V + + S+ + L + M G NV++ N +
Sbjct: 71 DALASFY-RMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C D A +++ +M G +P +N L++ L N GK+ EA E+ MV +G
Sbjct: 130 INCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH 189
Query: 287 YIHLVS 292
+++S
Sbjct: 190 EPNVIS 195
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T++IL+ C G + A K+++ + KL P + ++ + + ++ + ++
Sbjct: 440 TYSILLDGFCKHGHLDEALKLLKSMQEKKL---EPNIVHHTILIEGMFIAGKLEVAKELF 496
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++ +G P I TY +++ + G D+ + L +M GF P+ +YN+++ +
Sbjct: 497 SKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 556
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
A+ L++ M F ++ F L+D
Sbjct: 557 QDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G T+N L+ +G ++ + KL N P ++N ++ AL +
Sbjct: 229 MIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGK 288
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V M PD++TYN ++ + L K+ + M +SG +P+ TY
Sbjct: 289 MKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTT 348
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K A++L MK P ++ +T+L+DGL + +L+ +M +G
Sbjct: 349 MIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQG 408
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV YT+++ + G LE A++ F ++ KG NV TYN MI G C A F EA
Sbjct: 409 IQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAM 468
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +ME +GC P+ + + T++ L + +A +++R M+ +G
Sbjct: 469 DLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARG 513
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 140/290 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI + G + V K + + +P YN I+H+L +
Sbjct: 159 VVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKL 218
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y +M +G +P+++TYN ++ +G L + LL+EM +PD T+N
Sbjct: 219 LGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNT 278
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LGK K AA +L M + P V+ + +L+DG + KY F MA G
Sbjct: 279 LIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSG 338
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V YT MI +++A LF+ M K +P++ TY S+I G C + A
Sbjct: 339 VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAI 398
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ K+M+ +G P+ Y L+ L G+L A E + ++ KG ++++
Sbjct: 399 ALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNV 448
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 132/279 (47%), Gaps = 18/279 (6%)
Query: 10 ARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A TF +IC E A K++ I L R + +++ K++
Sbjct: 483 AITFKTIICALFEKDENDKAEKILREMIARGLQEARKVR------------LKEAKIVLA 530
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V M+ PD++TY +M + + +L + M + G +P+ Y I++ L
Sbjct: 531 V---MTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLC 587
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A++L MK P+++ +T+L+D L + +L+ EM G PDV
Sbjct: 588 KKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVY 647
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT+++ +G LE A+++F ++ KG NV Y +MI C AG FDEA + +M
Sbjct: 648 SYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKM 707
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E +GC P+ + ++ ++ L + +A +++ M+ +G
Sbjct: 708 EDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 122/254 (48%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
V F + L P +N IL +L+ + Y + ++++ G PD+ T NI+M
Sbjct: 48 VASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNC 107
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
L + +L + + G+ P+ T N L+ L + AL + + GF +
Sbjct: 108 FCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLN 167
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + TL++GL + G A ++ PDVV Y +I S L A DL+
Sbjct: 168 QVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYS 227
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
MI KG PNV TYN+++ GFC+ G EA +++ EM+ + NP+ +NTL+ L G
Sbjct: 228 EMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEG 287
Query: 270 KLAEAHEVIRHMVE 283
K+ A V+ M++
Sbjct: 288 KMKAAKIVLAVMMK 301
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 133/294 (45%), Gaps = 20/294 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALL 56
M E G ++ IL+ C G + A++ +R +K N + +YN +++ L
Sbjct: 404 MKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQ----TYNVMINGLC 459
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +M +G PD +T+ ++CA + + D+ ++L EM G
Sbjct: 460 KADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQE--- 516
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ + A +L M + P V+ + TLMDG L KY F M
Sbjct: 517 ---------ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
A G P+V CYT+MI +++A LF+ M K PN+ TY S+I C
Sbjct: 568 AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHL 627
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ A ++KEM+ G P+ Y L+ L +G+L A E+ + ++ KG ++++
Sbjct: 628 ERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNV 681
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 135/342 (39%), Gaps = 64/342 (18%)
Query: 12 TFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI G+ G A+ V+ +K+ + +P +YN+++ + + K ++V+
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACI---KPDVVTYNSLIDGYFFLNKVKNAKYVF 331
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+ G P++ TY ++ + +D+ L +EM PD TY L+ L K
Sbjct: 332 YSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKN 391
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF--------------- 173
A+ L MKE G P V +T L+D L + G L+ K FF
Sbjct: 392 HHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTY 451
Query: 174 --------------------DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+M KGCMPD + + +I + E +KA+ + MI
Sbjct: 452 NVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIA 511
Query: 214 KGQL-----------------------PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+G P+V TY +++ G+ + + A + M G
Sbjct: 512 RGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMG 571
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN Y ++ L + EA + M K + ++V+
Sbjct: 572 VTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVT 613
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 124/297 (41%), Gaps = 10/297 (3%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T NIL+ C + A V+ +K + P + N ++ L +
Sbjct: 92 NGATPDLCTLNILMNCFCHLTHITFAFSVLANILKR---GYHPNAITLNTLIKGLCFRGE 148
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + Q+ +G+ + ++Y ++ + G+ RLL ++ PD YN
Sbjct: 149 IKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNT 208
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H L K A +L + M G P+V+ + L+ G G+L +EM K
Sbjct: 209 IIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV + +I + G+++ A+ + M+ P+V TYNS+I G+ K A
Sbjct: 269 INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK 328
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
+ M G PN Y T++ L + EA + M KY +++ Y
Sbjct: 329 YVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM----KYKNMIPDIVTY 381
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/215 (19%), Positives = 83/215 (38%), Gaps = 35/215 (16%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G + + I+I + + + F + K N P +Y +++ AL
Sbjct: 567 MAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHH 626
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M + G PD+ +Y I++ + G+L+ + + G+ + Y
Sbjct: 627 LERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVY-- 684
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
T +++ L +AG D +M +KG
Sbjct: 685 ---------------------------------TAMINELCKAGLFDEALDLQXKMEDKG 711
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
CMPD V + ++I + E +KA+ + MI +G
Sbjct: 712 CMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 52/120 (43%)
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
FD M P + +++S + LF + G P++ T N ++ FC
Sbjct: 51 FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A +++ + RG +PN + NTL+ L G++ +A +V +G ++ VS
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 142/277 (51%), Gaps = 5/277 (1%)
Query: 14 NILIC-TCGEVGLARKVVE---RFI-KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
N+L+C T V + ++E RF+ + +L P +YN ++ + + + +
Sbjct: 152 NLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELI 211
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G +PD ++Y VM + ++ + ++++M + D TYN L+H+L K
Sbjct: 212 SEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKH 271
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL L ++ GF + ++ ++D + G +D K +EM +GC+PDVV Y
Sbjct: 272 QHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTY 331
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I + AGE+ +A+ + M G PN +Y + ++G C G EA MMK E
Sbjct: 332 TAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEE 391
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ PN + Y+ ++ R GKL++A +V+R M+ KG
Sbjct: 392 QWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKG 428
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 130/288 (45%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N LI ++ +E + L P K SY ++ L R+ + +
Sbjct: 183 GIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREV 242
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V ++M D D +TYN ++ + D+ + L E + GF D Y+ ++
Sbjct: 243 MDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDS 302
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K + A ++N M G P V+ +T +++G S+AG + + +M GC P+
Sbjct: 303 YCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPN 362
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V YT + G +A+++ + PN TY+ ++ GF GK +AC +++
Sbjct: 363 TVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVR 422
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM +G P + N L+ +L G++ EA + + + G ++ V+
Sbjct: 423 EMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVN 470
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 121/268 (45%), Gaps = 5/268 (1%)
Query: 18 CTCGEVGLARKVV-ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
C G + A+++V E F + + P +Y AI++ + + QQM G
Sbjct: 304 CKEGRMDQAKEIVNEMFTRGCI----PDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGC 359
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ ++Y + + G + ++ ++P+ TY++++H + K A +
Sbjct: 360 KPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACD 419
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
++ M GF P+ + L+ L R G +D K F +E N GC + V +T +I +
Sbjct: 420 VVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFC 479
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
++E A L D M + P+ TY ++I G+ +EA + +M +G +P +
Sbjct: 480 QQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPV 539
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
Y T++ G++ + ++ M+ +
Sbjct: 540 TYRTVIHRYGQIGRVEDLLNLLDKMLTR 567
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI + A + ++ +++ F+ K Y+AI+ + + + + +M
Sbjct: 260 TYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEM 319
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PD++TY ++ + G++ Q ++L +M + G P+ +Y L L +
Sbjct: 320 FTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNS 379
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTV 190
A ++ +E + P+ + ++ +M G R G L DAC EM KG P V +
Sbjct: 380 SEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACD-VVREMIGKGFFPTPVEINL 438
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ S G +++A+ + + G N + ++I FC + A +++ +M
Sbjct: 439 LLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSN 498
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + Y T++ L G++ EA E+ M++KG
Sbjct: 499 KHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKG 533
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 92/200 (46%)
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
VM + R GKL ++L M ++G P+ N +HVL + AL L M+ +G
Sbjct: 124 VMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLG 183
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P+V+ + L+ G ++ EM KGC PD V Y ++ + +
Sbjct: 184 IMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVM 243
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D+ + M L + TYN++I C DEA ++E + RG + + Y+ +V +
Sbjct: 244 DVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSY 303
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G++ +A E++ M +G
Sbjct: 304 CKEGRMDQAKEIVNEMFTRG 323
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 108/225 (48%), Gaps = 9/225 (4%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G AR++++ S+ + P +Y+ ++H R+ KL + V ++M +
Sbjct: 373 LCQKGNSSEAREMMK---ASEEQWWTPNAITYSVVMHGFR--REGKLSDACDVVREMIGK 427
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ P + N+++ + R+G++D+ + ++E G + + + ++H + D AA
Sbjct: 428 GFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAA 487
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L+LL+ M P + +TT++D L + G ++ +M KG P V Y +I
Sbjct: 488 LSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHR 547
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
Y G +E +L D M+T+ + F N +I C G + A
Sbjct: 548 YGQIGRVEDLLNLLDKMLTRQECRTAF--NQVIEKLCTFGNLEAA 590
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 79/171 (46%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ D Y ++L VL K A +L M G + F +M SRAG L
Sbjct: 79 YRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAM 138
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M G P+++ I + A LEKA + M G +PNV TYN +I+G+
Sbjct: 139 QVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGY 198
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
C + ++A ++ EM +GC+P+ + Y T++ L ++ E +VI M
Sbjct: 199 CDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKM 249
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 104/258 (40%), Gaps = 18/258 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYN--AILHAL 55
MI GF T N+L+ C G V A+K +E + N N+ N ++H
Sbjct: 424 MIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFME-----ECLNMGCAVNAVNFTTVIHRF 478
Query: 56 LGIRQYKLIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
Q IE + D PD +TY ++ A + G++++ L +M + G
Sbjct: 479 C---QQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGID 535
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P TY ++H G+ + LNLL+ M + F +++ L GNL+A
Sbjct: 536 PTPVTYRTVIHRYGQIGRVEDLLNLLDKM--LTRQECRTAFNQVIEKLCTFGNLEAADKL 593
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
++ D V++ SY+ G A + M ++ +P++ + +
Sbjct: 594 LGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQ 653
Query: 233 AGKFDEACTMMKEMESRG 250
GK +EA + RG
Sbjct: 654 EGKSEEADNLFLRFVERG 671
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 5/289 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T T+ ++ C G+ A ++ + ++ + P Y+AI+ +L
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M ++G PD+ TYN ++ G+ +LL EM SPD T
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + +++++DG + LDA ++ F MA
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+++ + +I Y A ++ +L M G + + TYN++I GF + G +
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +++EM S G P+ + +TL+ L + GKL +A E+ + M + K
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 7/285 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C+C ++ A + F K P ++N +LH L + ++
Sbjct: 116 SFTILIKCFCSCSKLPFA---LSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM + P+++T+ +M R G++ + LLD M G P TY ++ + K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 129 DKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
++ALNLL M+EV P+V+ ++ ++D L + G + F EM KG PD+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y MI + ++G A+ L M+ + P+V TYN++I F GKF EA + EM
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG PN + Y++++ +L A + M KG +L++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 44/308 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + + ++ ++ + + L+ +YQ+M + DI ++ I++
Sbjct: 68 SDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSC 127
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+N LLH L D+ ALNL + M E P+V+ F
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG--------------------------------- 180
TTLM+GL R G + D M G
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 181 ---CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+P+VV Y+ +I S G AQ+LF M KG P++FTYNSMI GFC +G++
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A +++EM R +P+ + YN L++ GK EA E+ M+ +G Y ++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 292 SKFKRYKR 299
F + R
Sbjct: 368 DGFCKQNR 375
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ G ++ + +M++ G D TYN ++ Y +G L+ LL EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-----------GFDPSVLHFTT 155
SG PD T + LL L K AL + M++ G +P V +
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ GL G + ++EM ++G +PD + Y+ MI L++A +FD M +K
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV T+ ++I G+C AG+ D+ + EM RG N + Y TL+ R G + A
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636
Query: 276 EVIRHMVEKGKYIHLVS 292
++ + M+ G Y ++
Sbjct: 637 DIFQEMISSGVYPDTIT 653
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN ++H + + Q+M G PDI+T + ++ GKL +
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 106 MGRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
M +S G PD TYNIL+ L K L A L M G P + ++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+++DGL + LD FD M +K P+VV +T +I Y AG ++ +LF M +
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G + N TY ++I GF G + A + +EM S G P+ + +++ L + +L A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 275 HEVIRHM 281
++ +
Sbjct: 671 VAMLEKL 677
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M E G T+N LI G++ A +++ I S L P + + +L L
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC---PDIVTCDTLLDGLCD 477
Query: 57 ------GIRQYKLIEWVYQQMSDE----GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ +K+++ + + G PD+ TYNI++ GK + L +EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + + M F P+V+ FTTL++G +AG +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + + + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G + A M+++++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQ 678
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M PSV+ F LM + R D + +M K D+ +T++I
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 194 SYIAAGELEKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + +L A F G ITK G P+V T+N+++ G C+ + EA + +M C
Sbjct: 123 CFCSCSKLPFALSTF-GKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + + TL++ L G++ EA ++ M+E G
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%)
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + L+ L +M RS P + L+ V+ + ++P ++L M+ +
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
FT L+ L F ++ G PDVV + ++ + +A +LF
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M PNV T+ +++ G C G+ EA ++ M G P + Y T+V + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 271 LAEAHEVIRHMVEKGKYI 288
A ++R M E I
Sbjct: 235 TVSALNLLRKMEEVSHII 252
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E GF L L G L+ F +M +P VV + ++ + +
Sbjct: 40 EAGFGGESLK---LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
L+ M K +++++ +I+ FC K A + ++ G +P+ + +NTL+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLL 156
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
L +++EA + M E
Sbjct: 157 HGLCVEDRVSEALNLFHQMFE 177
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 5/289 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T T+ ++ C G+ A ++ + ++ + P Y+AI+ +L
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M ++G PD+ TYN ++ G+ +LL EM SPD T
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + +++++DG + LDA ++ F MA
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+++ + +I Y A ++ +L M G + + TYN++I GF + G +
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +++EM S G P+ + +TL+ L + GKL +A E+ + M + K
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 7/285 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C+C ++ A + K P ++N +LH L + ++
Sbjct: 116 SFTILIKCFCSCSKLPFALSTFGKLTK---LGLHPDVVTFNTLLHGLCVEDRVSEALNLF 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM + P+++T+ +M R G++ + LLD M G P TY ++ + K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 129 DKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
++ALNLL M+EV P+V+ ++ ++D L + G + F EM KG PD+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y MI + ++G A+ L M+ + P+V TYN++I F GKF EA + EM
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG PN + Y++++ +L A + M KG +L++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 44/308 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + + ++ ++ + + L+ +YQ+M + DI ++ I++
Sbjct: 68 SDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSC 127
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+N LLH L D+ ALNL + M E P+V+ F
Sbjct: 128 SKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG--------------------------------- 180
TTLM+GL R G + D M G
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 181 ---CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+P+VV Y+ +I S G AQ+LF M KG P++FTYNSMI GFC +G++
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A +++EM R +P+ + YN L++ GK EA E+ M+ +G Y ++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 292 SKFKRYKR 299
F + R
Sbjct: 368 DGFCKQNR 375
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ G ++ + +M++ G D TYN ++ Y +G L+ LL EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-----------GFDPSVLHFTT 155
SG PD T + LL L K AL + M++ G +P V +
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ GL G + ++EM ++G +PD + Y+ MI L++A +FD M +K
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV T+ ++I G+C AG+ D+ + EM RG N + Y TL+ R G + A
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636
Query: 276 EVIRHMVEKGKYIHLVS 292
++ + M+ G Y ++
Sbjct: 637 DIFQEMISSGVYPDTIT 653
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN ++H + + Q+M G PDI+T + ++ GKL +
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 106 MGRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
M +S G PD TYNIL+ L K L A L M G P + ++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+++DGL + LD FD M +K P+VV +T +I Y AG ++ +LF M +
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G + N TY ++I GF G + A + +EM S G P+ + +++ L + +L A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 275 HEVIRHM 281
++ +
Sbjct: 671 VAMLEKL 677
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M E G T+N LI G++ A +++ I S L P + + +L L
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC---PDIVTCDTLLDGLCD 477
Query: 57 ------GIRQYKLIEWVYQQMSDE----GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ +K+++ + + G PD+ TYNI++ GK + L +EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + + M F P+V+ FTTL++G +AG +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + + + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G + A M+++++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQ 678
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 74/152 (48%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M PSV+ F LM + R D + +M K D+ +T++I
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIK 122
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ + +L A F + G P+V T+N+++ G C+ + EA + +M C P
Sbjct: 123 CFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRP 182
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + + TL++ L G++ EA ++ M+E G
Sbjct: 183 NVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%)
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + L+ L +M RS P + L+ V+ + ++P ++L M+ +
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
FT L+ L F ++ G PDVV + ++ + +A +LF
Sbjct: 115 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQ 174
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M PNV T+ +++ G C G+ EA ++ M G P + Y T+V + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 271 LAEAHEVIRHMVEKGKYI 288
A ++R M E I
Sbjct: 235 TVSALNLLRKMEEVSHII 252
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/141 (21%), Positives = 58/141 (41%), Gaps = 3/141 (2%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E GF L L G L+ F +M +P VV + ++ + +
Sbjct: 40 EAGFGGESLK---LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPD 96
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
L+ M K +++++ +I+ FC K A + ++ G +P+ + +NTL+
Sbjct: 97 LVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLL 156
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
L +++EA + M E
Sbjct: 157 HGLCVEDRVSEALNLFHQMFE 177
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 147/289 (50%), Gaps = 5/289 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T T+ ++ C G+ A ++ + ++ + P Y+AI+ +L
Sbjct: 210 MMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM--EEVSHIIPNVVIYSAIIDSLCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M ++G PD+ TYN ++ G+ +LL EM SPD T
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K K A L + M G P+ + +++++DG + LDA ++ F MA
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+++ + +I Y A ++ +L M G + + TYN++I GF + G +
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +++EM S G P+ + +TL+ L + GKL +A E+ + M + K
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKK 496
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 137/285 (48%), Gaps = 7/285 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FNILI C+C ++ A + F K P ++ +LH L + ++
Sbjct: 116 SFNILIKCFCSCSKLPFA---LSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLF 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
QM + P+++T+ +M R G++ + LLD M G P TY ++ + K
Sbjct: 173 HQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKK 232
Query: 129 DKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
++ALNLL M+EV P+V+ ++ ++D L + G + F EM KG PD+
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y MI + ++G A+ L M+ + P+V TYN++I F GKF EA + EM
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG PN + Y++++ +L A + M KG +L++
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 138/308 (44%), Gaps = 44/308 (14%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RP + + ++ ++ + + L+ +YQ+M + DI ++NI++
Sbjct: 68 SDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSC 127
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL ++ + G PD T+ LLH L D+ ALNL + M E P+V+ F
Sbjct: 128 SKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 187
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG--------------------------------- 180
TTLM+GL R G + D M G
Sbjct: 188 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEE 247
Query: 181 ---CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+P+VV Y+ +I S G AQ+LF M KG P++FTYNSMI GFC +G++
Sbjct: 248 VSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWS 307
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A +++EM R +P+ + YN L++ GK EA E+ M+ +G Y ++
Sbjct: 308 DAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMI 367
Query: 292 SKFKRYKR 299
F + R
Sbjct: 368 DGFCKQNR 375
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 121/257 (47%), Gaps = 11/257 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ G ++ + +M++ G D TYN ++ Y +G L+ LL EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-----------GFDPSVLHFTT 155
SG PD T + LL L K AL + M++ G +P V +
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ GL G + ++EM ++G +PD + Y+ MI L++A +FD M +K
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV T+ ++I G+C AG+ D+ + EM RG N + Y TL+ R G + A
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636
Query: 276 EVIRHMVEKGKYIHLVS 292
++ + M+ G Y ++
Sbjct: 637 DIFQEMISSGVYPDTIT 653
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 112/247 (45%), Gaps = 11/247 (4%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN ++H + + Q+M G PDI+T + ++ GKL +
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKV 490
Query: 106 MGRS-----------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
M +S G PD TYNIL+ L K L A L M G P + ++
Sbjct: 491 MQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYS 550
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+++DGL + LD FD M +K P+VV +T +I Y AG ++ +LF M +
Sbjct: 551 SMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 610
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G + N TY ++I GF G + A + +EM S G P+ + +++ L + +L A
Sbjct: 611 GIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Query: 275 HEVIRHM 281
++ +
Sbjct: 671 VAMLEKL 677
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 118/261 (45%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M E G T+N LI G++ A +++ I S L P + + +L L
Sbjct: 421 MTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC---PDIVTCDTLLDGLCD 477
Query: 57 ------GIRQYKLIEWVYQQMSDE----GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ +K+++ + + G PD+ TYNI++ GK + L +EM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + + M F P+V+ FTTL++G +AG +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 597
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + + + Y +I + G + A D+F MI+ G P+ T +M
Sbjct: 598 DDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNM 657
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G + A M+++++
Sbjct: 658 LTGLWSKEELKRAVAMLEKLQ 678
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 2/153 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M PSV+ F LM + R D + +M K D+ + ++I
Sbjct: 63 AIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIK 122
Query: 194 SYIAAGELEKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + +L A F G ITK G P+V T+ +++ G C+ + EA + +M C
Sbjct: 123 CFCSCSKLPFALSTF-GKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCR 181
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + + TL++ L G++ EA ++ M+E G
Sbjct: 182 PNVVTFTTLMNGLCREGRIVEAVALLDRMMEDG 214
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%)
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + L+ L +M RS P + L+ V+ + ++P ++L M+ +
Sbjct: 55 HEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDI 114
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
F L+ L F ++ G PDVV +T ++ + +A +LF
Sbjct: 115 YSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQ 174
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M PNV T+ +++ G C G+ EA ++ M G P + Y T+V + G
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234
Query: 271 LAEAHEVIRHMVEKGKYI 288
A ++R M E I
Sbjct: 235 TVSALNLLRKMEEVSHII 252
>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 938
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 148/310 (47%), Gaps = 23/310 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G +FN LI C G A+ +V+ + N I H +L
Sbjct: 187 MVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEI------------SELNLITHTILI 234
Query: 58 IRQYKL--IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Y L IE Y+ M G+ PD++T++ ++ + GK+ + LL EM G P+
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNH 294
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L K AL L + M G ++ +T LM GL +AG+L + F
Sbjct: 295 VTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKM 354
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +P+VV YT ++ AG+L A+ + M+ K PNV TY+SMI G+ G
Sbjct: 355 LLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGM 414
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM----VEKGKYI--H 289
+EA ++M++ME + PN Y T++ L AGK A E+ + M VE+ YI
Sbjct: 415 LEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDA 474
Query: 290 LVSKFKRYKR 299
LV+ KR R
Sbjct: 475 LVNHLKRIGR 484
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 47/291 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHA 54
M+ +GF TF+ +I C G+V GL + +E P +Y ++ +
Sbjct: 250 MVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEM------GVYPNHVTYTTLVDS 303
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L + Y+ +Y QM G D++ Y ++M ++ G L + +
Sbjct: 304 LFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEK------------- 350
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+ +LL D + P+V+ +T L+DGL +AG+L + ++
Sbjct: 351 --TFKMLLE-----DNEV---------------PNVVTYTALVDGLCKAGDLSSAEFIIT 388
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M K P+VV Y+ MI Y+ G LE+A L M + +PN FTY ++I G AG
Sbjct: 389 QMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K + A M KEM G N + + LV++L+ G++ E +++ MV KG
Sbjct: 449 KQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 130/287 (45%), Gaps = 12/287 (4%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
NI++ E G ++ ++ + P +Y L ++ I ++ +
Sbjct: 612 NIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLS 671
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G YN ++ +LG + ++++M GF PD T+N L+H G
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGK 731
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+ + M E G P+V + T++ GLS AG + + + EM ++G PD Y +I+
Sbjct: 732 ALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALIS 791
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G +++ ++ MI G +P TYN +I F GK +A +MKEM R +P
Sbjct: 792 GQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSP 851
Query: 254 NFLVYNTLVSNL------------RNAGKLAEAHEVIRHMVEKGKYI 288
N Y T++S L + A LAEA +++ M+E+ YI
Sbjct: 852 NTSTYCTMISGLCKLCTHPEVEWNKKAMYLAEAKGLLKEMIEEKGYI 898
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 127/291 (43%), Gaps = 42/291 (14%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++ LL + +W Y+ M ++G PDI T+NI+M ++ + G + +L D+M
Sbjct: 541 SYNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKM 599
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P NI++ +L + K A+++L+ M + P++ + +D S+
Sbjct: 600 KSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRA 659
Query: 167 DA---------------------------CKY--------FFDEMANKGCMPDVVCYTVM 191
DA CK ++M +G +PD V + +
Sbjct: 660 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNAL 719
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ Y + KA + M+ G PNV TYN++IRG AG E + EM+SRG
Sbjct: 720 MHGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGM 779
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
P+ YN L+S G E+ + M+ G Y L+S+F +
Sbjct: 780 RPDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTSTYNVLISEFAK 830
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 48 YNAILHAL-LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+N+++H + + + VY +M G +PD+ N+++ + L K+ Q + +
Sbjct: 96 WNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVLI---HSLCKVGQLSFAISLL 152
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
S D TYN ++ L + A L+ M ++G P + F TL+DG + GN
Sbjct: 153 RNRVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNF 212
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
K DE++ +++ +T++I+SY +E+A + M+ G P+V T++S+
Sbjct: 213 ARAKALVDEISE----LNLITHTILISSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSI 265
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C GK E +++EME G PN + Y TLV +L A A + MV +G
Sbjct: 266 INRLCKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGI 325
Query: 287 YIHLV 291
+ LV
Sbjct: 326 PVDLV 330
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TFNI++ + + G +++ + K K +P N ++ L +
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGK 623
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + QM P++ TY I + + + D + + + G YN
Sbjct: 624 MKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A ++ M+ GF P + F LM G ++ + M G
Sbjct: 684 LIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAG 743
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V Y +I AG +++ + M ++G P+ FTYN++I G G E+
Sbjct: 744 ISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESM 803
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+ EM + G P YN L+S GK+ +A E+++ M
Sbjct: 804 TIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEM 844
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 116/269 (43%), Gaps = 1/269 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P + +L+ + G R+ + F N P +Y A++ L
Sbjct: 320 MVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGD 379
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E++ QM ++ P+++TY+ ++ + G L++ L+ +M P+ TY
Sbjct: 380 LSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGT 439
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A + M+ +G + + L++ L R G + K +M +KG
Sbjct: 440 VIDGLFKAGKQEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D + YT +I + G+ E A + M K +V +YN +I G GK A
Sbjct: 500 VTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKVG-AD 558
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
K M +G P+ +N ++++ R G
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQG 587
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+N +I + GL ++V + + K RP +YNA++ I
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +Y +M +G P TYN+++ ++GK+ Q L+ EMG+ SP+ TY
Sbjct: 799 KKESMTIYCEMIADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCT 858
Query: 121 LLHVLGK 127
++ L K
Sbjct: 859 MISGLCK 865
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 4/160 (2%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVM 191
A L+ M G P + + +L+ + G + D + +M G PDV V+
Sbjct: 76 GAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIACGVSPDVFALNVL 135
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I S G+L A L + + TYN++I G C G DEA + EM G
Sbjct: 136 IHSLCKVGQLSFAISLLRNRVIS---VDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGI 192
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
P+ + +NTL+ G A A ++ + E H +
Sbjct: 193 LPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTI 232
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+N LI C G+V ++ E +K + +P ++N +LH L
Sbjct: 527 MLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGI---QPDIYTFNLLLHGLCN 583
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + GY P++ TY +++ + K+++ LL+E+ +
Sbjct: 584 ADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVV 643
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ AA L + MK G S +++LM GL G +D K+ DEM
Sbjct: 644 YNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMR 703
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VVCYT +I Y G++ K + M + PN FTY MI GFC GK
Sbjct: 704 KEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTK 763
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EA ++ EM +G P+ + YN + L GK+ EA +V M
Sbjct: 764 EAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEM 807
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+ G A ++ R + F P + NA++H L + + + M + G
Sbjct: 476 LCKAGKQGEAVELWCRLLGK---GFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGL 532
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
D +TYN ++ + GK+ + L +EM + G PD +T+N+LLH L DK A
Sbjct: 533 VFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR 592
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + K+ G+ P+V + ++DG +A ++ + +E+ +K + V Y +I +Y
Sbjct: 593 LWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYC 652
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G + A L D M ++G L + TY+S++ G C G D+A ++ EM G PN +
Sbjct: 653 INGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVV 712
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y T++ G++ + + V++ M
Sbjct: 713 CYTTIIGGYSKLGQMNKVNIVLQEM 737
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 139/284 (48%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N +I C G + A + E+ +K K+ P +Y+ ++ L+ + +
Sbjct: 286 GVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV---SPSLITYSVFINGLIKLEKI 342
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V ++MS+ G+ P+ + YN ++ ++G + + ++ D+M G SP+ T N L
Sbjct: 343 DEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSL 402
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K D+ A N+L M G + F+ +++ L +F EM +
Sbjct: 403 IQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNL 462
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ T +++ AG+ +A +L+ ++ KG +PN+ T N++I G C AG E
Sbjct: 463 RPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLK 522
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++M RG + + YNTL+S GK+ E E+ MV+KG
Sbjct: 523 LLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG 566
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 124/226 (54%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M G AP+++TYN ++ + G+LD+ +R ++M + SP TY++ ++ L
Sbjct: 278 LFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLI 337
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +K A +L M E+GF P+ + + TL+DG + GN+ D+M +KG P+ V
Sbjct: 338 KLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSV 397
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+I + + ++ +A+++ + MI +G N +++ +I C+ +F A ++EM
Sbjct: 398 TLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREM 457
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
R PN + TLVS L AGK EA E+ ++ KG ++V+
Sbjct: 458 LLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVT 503
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 130/270 (48%), Gaps = 16/270 (5%)
Query: 32 RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ----------------MSDEG 75
R +S+ F +N + ++G++ L+ VY ++ +G
Sbjct: 157 RNFESRHFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKG 216
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
P + T ++ + + +L + + + D + G PD H ++ +++ KG + A+
Sbjct: 217 LFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAI 276
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L + M+++G P+V+ + ++ GL ++G LD F ++M + P ++ Y+V I
Sbjct: 277 GLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGL 336
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
I ++++A + M G +PN YN++I G+C G EA + +M S+G +PN
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ N+L+ + ++ +A V+ M+ +G
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRG 426
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 16/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPF-KNSYNAILHAL- 55
M+ G + T N LI C ++G A V+E I L P + S++ +++ L
Sbjct: 387 MLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGL----PINQGSFSMVINWLC 442
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIV--MCAKYRLGK-LDQFHRLLDEMGRSGFS 112
L R + ++ + + D L +V +C + G+ ++ + RLL + GF
Sbjct: 443 LKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGK----GFV 498
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ T N L+H L K L LL M E G + + TL+ G + G +
Sbjct: 499 PNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFEL 558
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+EM KG PD+ + +++ A ++++A L+ G +PNV+TY MI G+C
Sbjct: 559 KEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCK 618
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A K +E ++ E+ S+ N +VYN+L+ G + A + M +G
Sbjct: 619 ANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRG 671
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 91/234 (38%), Gaps = 14/234 (5%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+NG+ T+ ++I C +V ++ + KL YN+++ A
Sbjct: 599 KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKL---ELNSVVYNSLIRAYCING 655
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ M G TY+ +M +G +D LLDEM + G P+ Y
Sbjct: 656 NMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYT 715
Query: 120 ILLHVLGKGDKPLAALN----LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
++ G L +N +L M P+ +T ++DG + G +E
Sbjct: 716 TII----GGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNE 771
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
M KG +PD V Y G++E+A + D M + + TY ++I G
Sbjct: 772 MTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 385 PDTGTYTMIINEF 397
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVT 424
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G PD
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTG 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G P+V TYN ++ G
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 1/286 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KL 63
+P T F+ +I GE L K ++ F F+ P N IL L+ + Y K
Sbjct: 130 NYPVTPTLFSYIINIYGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQNYIKP 189
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+++ P+ +YNI++ A G++ + L ++M + PD +Y IL+
Sbjct: 190 AFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQ 249
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + + A++LL M G+ P L +TTL++ L R L M KGC P
Sbjct: 250 ALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNP 309
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D++ Y +I + G A + + M + G +PN+ +Y +++ G C G FDEA + +
Sbjct: 310 DIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHL 369
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+EM +G +P+F V N L+ N GK+ EA V+ +++ G+ H
Sbjct: 370 EEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKHGEAPH 415
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P+ IL + + F + ++ P SYN ++ A Q +
Sbjct: 168 PSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYS 227
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ QM PD+ +Y I+M A R +++ LL++M G+ PD +Y LL+ L
Sbjct: 228 LFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLC 287
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEMANKGCMPDV 185
+ K A LL MK G +P ++H+ T++ G R G +DACK ++M + GCMP++
Sbjct: 288 RKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACK-VLEDMESNGCMPNL 346
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++ G ++A+ + M+ KG P+ N++I+GFC GK +EAC +++E
Sbjct: 347 VSYRTLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEE 406
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ G P+ + +VS + L E++
Sbjct: 407 LLKHGEAPHTETWVMMVSRICEVDDLQRIGEIL 439
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 127/282 (45%), Gaps = 11/282 (3%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
LI + + LA+++ + S+ NF+ +SY ++ L + + I+ + + +
Sbjct: 73 LIASQSDPLLAKEIFD--YASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLLTDLKSKN 130
Query: 76 Y--APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD---K 130
Y P + +Y I + + L D+ ++ + + +P N +L +L K
Sbjct: 131 YPVTPTLFSYIINIYGEANLP--DKALKIFYTILKFDCNPSPKHLNGILEILVSHQNYIK 188
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P A +L P+ + L+ G + F++M + MPDV Y +
Sbjct: 189 P--AFDLFKDAHTYDVFPNTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRI 246
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ + ++ A DL + M+ KG +P+ +Y +++ C K EA ++ M+ +G
Sbjct: 247 LMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKG 306
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
CNP+ + YNT++ G+ +A +V+ M G +LVS
Sbjct: 307 CNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVS 348
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 127/238 (53%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + +L + V+ ++ G P ++++N +M ++G LD+ RL + M
Sbjct: 139 FNILMHRFCKEGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M E G P+ + FTTL+DG + G LD
Sbjct: 199 ASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ ++ ++G PD++ Y +I + G+L++ +DL D M KG P+ TY ++I
Sbjct: 259 LAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G + A K+M + +VY L+S L G+ +A +++R M+ G
Sbjct: 319 DGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREMLSVG 376
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K + +P S+N +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITK---WGLKPSVVSFNTLMNGYIK 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D+ H L DEM G P+ T
Sbjct: 184 MGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELFDEMLEKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K K A+ + + G P ++ + TL+ G + G+L + DEM+
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A + MI + + Y ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + ++++ M G +V+
Sbjct: 364 DAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVPSVVT 418
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 128/273 (46%), Gaps = 35/273 (12%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E G R +E F S+ F ++ +L L+ ++ +KL+ Y+++
Sbjct: 69 FSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKVLDHLMKLKYFKLVWGFYKEIL 128
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ GY + +NI+M HR E G+ L
Sbjct: 129 ECGYPASLYFFNILM------------HRFCKE----------------------GEIRL 154
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A L + + + + G PSV+ F TLM+G + G LD + M G PDV Y+V+I
Sbjct: 155 AQL-VFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLI 213
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
++++A +LFD M+ KG +PN T+ ++I G C GK D A + K++ S+G +
Sbjct: 214 NGLCKESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLS 273
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YNTL+ G L + ++I M KG
Sbjct: 274 PDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKG 306
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 159/334 (47%), Gaps = 49/334 (14%)
Query: 12 TFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWV 67
T+NI+I C C ++ A ++ + +K + P + N++L+ G R + + V
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMK---LGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
QM + GY PD +T+ ++ ++ K + L++ M G PD TY +++ L K
Sbjct: 159 -DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+P ALNLLN M++ + V+ ++T++D L + ++D F EM NKG PDV
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 188 YTVMIT-----------------------------------SYIAAGELEKAQDLFDGMI 212
Y+ +I+ ++ G+L +A+ LFD MI
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ PN+ TYNS+I GFCM + DEA + M S+ C P+ + YNTL++ A K+
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV 397
Query: 273 EAHEVIRHMVEKG------KYIHLVSKFKRYKRC 300
+ E+ R M +G Y L+ F + C
Sbjct: 398 DGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 130/265 (49%), Gaps = 3/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GE LA ++ + K K+ Y+ ++ +L R ++ +M ++G
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKI---EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD+ TY+ ++ G+ RLL +M +P+ T+N L+ K K + A
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M + DP+++ + +L++G LD + F M +K C+PDVV Y +I +
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A ++ +LF M +G + N TY ++I GF A D A + K+M S G +PN +
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
YNTL+ L GKL +A V ++
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYL 476
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 138/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G+ TF L+ + A + V + + +P +Y A+++ L +
Sbjct: 161 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 220
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L + +M D++ Y+ V+ + + +D L EM G PD TY+
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A LL+ M E +P+V+ F +L+D ++ G L + FDEM +
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++V Y +I + L++AQ +F M++K LP+V TYN++I GFC A K +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ ++M RG N + Y TL+ A A V + MV G + ++++
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E TFN LI G++ A K+ + I+ + P +YN++++
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI---DPNIVTYNSLINGFCM 357
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ M + PD++TYN ++ + K+ L +M R G + T
Sbjct: 358 HDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT 417
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+H + A + M G P+++ + TL+DGL + G L+ F+ +
Sbjct: 418 YTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ Y +M AG++E DLF + KG P+V YN+MI GFC G +
Sbjct: 478 KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKE 537
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA T+ +M+ G P+ YNTL+ ++LR+ K A A E+I+ M
Sbjct: 538 EAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASA-ELIKEM 581
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G A +++ ++ K+ P ++N+++ A ++ KLIE ++ +M
Sbjct: 285 LCNYGRWSDASRLLSDMLERKI---NPNVVTFNSLIDAF--AKEGKLIEAEKLFDEMIQR 339
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
P+I+TYN ++ +LD+ ++ M PD TYN L++ K K +
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L M G + + +TTL+ G +A + D + F +M + G P+++ Y ++
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G+LEKA +F+ + P+++TYN M G C AGK ++ + + +G P+
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNT++S G EA+ + M E G
Sbjct: 520 VIAYNTMISGFCKKGLKEEAYTLFIKMKEDG 550
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 130/312 (41%), Gaps = 79/312 (25%)
Query: 45 KNSYNAILHALLGIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
K S NA+LH KL E V + +M P I+ ++ ++ A ++ K D
Sbjct: 35 KLSRNALLH-------LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISF 87
Query: 103 LDEMGRSGFSPDFHTYNIL-------------LHVLGK---------------------- 127
++M G S + +TYNI+ L +LGK
Sbjct: 88 GEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCH 147
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
G++ A+ L++ M E+G+ P + FTTL+ GL + + M KGC PD+V
Sbjct: 148 GNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVT 207
Query: 188 YTVMITSYIAAGE-----------------------------------LEKAQDLFDGMI 212
Y +I GE ++ A +LF M
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
KG P+VFTY+S+I C G++ +A ++ +M R NPN + +N+L+ GKL
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 273 EAHEVIRHMVEK 284
EA ++ M+++
Sbjct: 328 EAEKLFDEMIQR 339
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 124/274 (45%), Gaps = 7/274 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T+N LI C + A+++ + P +YN +++
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL---PDVVTYNTLINGFCK 392
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +++ MS G + +TY ++ ++ D + +M G P+ T
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMT 452
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL L K K A+ + ++++ +P + + + +G+ +AG ++ F ++
Sbjct: 453 YNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLS 512
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PDV+ Y MI+ + G E+A LF M G LP+ TYN++IR G
Sbjct: 513 LKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ ++KEM S + Y LV+++ + G+L
Sbjct: 573 ASAELIKEMRSCRFAGDASTYG-LVTDMLHDGRL 605
>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
Length = 734
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 134/270 (49%), Gaps = 16/270 (5%)
Query: 29 VVERFIKSKLFN-------------FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
V++ K++LF+ +P ++YN ++H L I ++K + + ++MS G
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG 272
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
PD TY ++ L L + H LD M +G SPD H +NI K A+
Sbjct: 273 LKPDCYTYGSLL---NYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++ N M++ G P+V+++ L+D L + G +D + F++M N+G P++V + ++
Sbjct: 330 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+ E+A++L M+ +G PN +N++I C G+ E ++ ME G P+
Sbjct: 390 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 449
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y L+S AG+ EA +V MV G
Sbjct: 450 FSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 149/317 (47%), Gaps = 32/317 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+NG T+N LI +G ++VV+ K +P +Y ++L+ L + +
Sbjct: 233 MIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSE 292
Query: 61 YK-----LIEW---------------------------VYQQMSDEGYAPDILTYNIVMC 88
++E ++ +M G +P+++ Y ++
Sbjct: 293 MHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALID 352
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
A +LG++D ++M G +P+ +N L++ L DK A L+ M + G P
Sbjct: 353 ALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICP 412
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ + F TL+ L G + + D M + G PD YT +I+ Y AG ++A+ +F
Sbjct: 413 NAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVF 472
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
DGM++ G P TYN+++ G+C A + D+A + +EM +G P + YNT++ L
Sbjct: 473 DGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQT 532
Query: 269 GKLAEAHEVIRHMVEKG 285
+ +EA E+ +M+ G
Sbjct: 533 KRFSEAKELYLNMINSG 549
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 138/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ENG FNI + G+ K ++ F K + P +Y A++ AL + +
Sbjct: 300 MVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGR 359
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E + QM +EG P+I+ +N ++ + K ++ L+ EM G P+ +N
Sbjct: 360 VDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNT 419
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + L++ M+ VG P +T L+ G AG D + FD M + G
Sbjct: 420 LICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIG 479
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P V Y ++ Y +A ++ A LF M+ KG P V TYN+++ G +F EA
Sbjct: 480 LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAK 539
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M + G + YN +++ L + + EA ++ + + KG +++++
Sbjct: 540 ELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 591
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 121/243 (49%), Gaps = 3/243 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y ++ L + + E V+QQM D G P+ TYN ++ +GK + ++
Sbjct: 205 PNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQM 264
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L++M G PD +TY LL+ L + + L+L M E G P F ++
Sbjct: 265 LEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAK 321
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G +D F++M G P+VV Y +I + G ++ A+ F+ MI +G PN+
Sbjct: 322 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 381
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+NS++ G C K++ A ++ EM +G PN + +NTL+ NL N G++ E +I M
Sbjct: 382 FNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLME 441
Query: 283 EKG 285
G
Sbjct: 442 HVG 444
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIK-SKLFNFRPFKNSYNAILHALLG 57
M++ G A FN LIC VG +V+E R I + RP SY ++
Sbjct: 405 MLDQGICPNAVFFNTLICNLCNVG---RVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCL 461
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E V+ M G +P +TYN ++ ++D + L EM R G +P T
Sbjct: 462 AGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVT 521
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +LH L + + A L +M G + + +++GL ++ +D F +
Sbjct: 522 YNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLC 581
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG +++ +T+MI + + G E A DLF + G +PNV TY + G +
Sbjct: 582 SKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLE 641
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E ++ ME G PN + N LV L + G ++ A + + E+
Sbjct: 642 EFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 688
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 7/213 (3%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP+ TY+I++ R+G+L + ++G+ + N LL L G + A++
Sbjct: 95 APNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMD 154
Query: 137 -LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN---KGCMPDVVCYTVMI 192
LL M E+G P + ++ L+ G + MAN + C P+VV YT +I
Sbjct: 155 VLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVI 214
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A ++A+ +F MI G PN TYN +I G+ GK+ E M+++M +RG
Sbjct: 215 DGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLK 274
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y +L++ L L+E H + MVE G
Sbjct: 275 PDCYTYGSLLNYL---CALSEMHSFLDLMVENG 304
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 42/276 (15%)
Query: 49 NAILHALL-GIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLL- 103
N +L L G R + ++ + Q+M + G PD ++Y+I++ C + R + + R++
Sbjct: 137 NQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMA 196
Query: 104 DEMGRS----------------------------------GFSPDFHTYNILLHVLGKGD 129
++ GRS G P+ TYN L+H
Sbjct: 197 NDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIG 256
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K + +L M G P + +L++ L + + F D M G PD +
Sbjct: 257 KWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHS---FLDLMVENGLSPDHHIFN 313
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+ ++Y G ++KA D+F+ M G PNV Y ++I C G+ D+A +M +
Sbjct: 314 IFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINE 373
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G PN +V+N+LV L K A E++ M+++G
Sbjct: 374 GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 409
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 116/288 (40%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G FN L+ CT + A ++V + + P +N ++ L
Sbjct: 370 MINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC---PNAVFFNTLICNLCN 426
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M G PD +Y ++ G+ D+ ++ D M G SP T
Sbjct: 427 VGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVT 486
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LLH + A L M G P V+ + T++ GL + K + M
Sbjct: 487 YNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMI 546
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G D+ Y +++ + +++A +F + +KG N+ T+ MI G+ +
Sbjct: 547 NSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKE 606
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + + + G PN + Y + NL G L E + M + G
Sbjct: 607 DAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNG 654
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 121/239 (50%), Gaps = 6/239 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N++L AL R + + + ++ + PD++TYN + R+ + +L M
Sbjct: 168 FNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMV 226
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-----PSVLHFTTLMDGLSR 162
SG +P TYNI+L + + A + MK+ G P V+ +TT++ GL
Sbjct: 227 ESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGV 286
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AG L+ + FDEMA +GC P V Y +I G +E A +FDGM KG +PNV T
Sbjct: 287 AGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVT 346
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y +IRG C AGK D +++ M++ GC P YN L+ L G++ + ++ M
Sbjct: 347 YTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKM 405
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 18/301 (5%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E F T+N L C + A V+ ++S P K +YN IL
Sbjct: 191 LEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVES---GIAPTKTTYNIILKGFFRA 247
Query: 59 RQYKLIEWVYQQMS-----DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
Q + + QM DE PD+++Y ++ G+L++ ++ DEM + G +P
Sbjct: 248 GQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAP 307
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN L+ V+ K A+ + + M+ G+ P+V+ +T L+ GL AG +D
Sbjct: 308 SVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLL 367
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ--LPNVFTYNSMIRGFC 231
+ M N GC P V Y V+I GE+EK DLF+ M +KG+ LPN TYN +I
Sbjct: 368 ERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKM-SKGEECLPNQDTYNIIISAMF 426
Query: 232 MAGKFDE---ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
M + ++ A M++EM RG P ++N +++ L G + +++R M EK + +
Sbjct: 427 MRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRKLLR-MQEKYRRL 485
Query: 289 H 289
Sbjct: 486 Q 486
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 99/197 (50%), Gaps = 9/197 (4%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK R L++ F+PD TYN L + AL++L M E G P+ +
Sbjct: 182 GKAASLVRALEQR----FTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTY 237
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKG-----CMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ G RAG L FF +M +G C PDVV YT M+ AG+LEKA+ +F
Sbjct: 238 NIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVF 297
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
D M +G P+V TYN++I+ C G ++A T+ M +G PN + Y L+ L +A
Sbjct: 298 DEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHA 357
Query: 269 GKLAEAHEVIRHMVEKG 285
GK+ +++ M G
Sbjct: 358 GKIDRGLKLLERMKNGG 374
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 122/256 (47%), Gaps = 9/256 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-----SKLFNFRPFKNSYNAILHAL 55
M+E+G T T+NI++ G R + F++ SK + +P SY ++H L
Sbjct: 225 MVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGL 284
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Q + V+ +M+ EG AP + TYN ++ + G ++ + D M G+ P+
Sbjct: 285 GVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNV 344
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY +L+ L K L LL MK G +P V + L+ L G ++ F++
Sbjct: 345 VTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEK 404
Query: 176 MAN-KGCMPDVVCYTVMITSYI---AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
M+ + C+P+ Y ++I++ A ++ A + + M+ +G LP F +N ++ G
Sbjct: 405 MSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEEMVDRGYLPRRFMFNRVLNGLM 464
Query: 232 MAGKFDEACTMMKEME 247
+ G + + +++ E
Sbjct: 465 LTGNQELSRKLLRMQE 480
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 6/184 (3%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +N LL L K A +L+ + E F P V+ + TL DG R +
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRAL-EQRFTPDVVTYNTLADGWCRVKDTSRALDVL 222
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-----PNVFTYNSMIR 228
M G P Y +++ + AG+L A D F M +G P+V +Y +M+
Sbjct: 223 RLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVH 282
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
G +AG+ ++A + EM GC P+ YN L+ + G + +A V M KG
Sbjct: 283 GLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVP 342
Query: 289 HLVS 292
++V+
Sbjct: 343 NVVT 346
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 139/290 (47%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKS--KLFNFRPFKNSYNAILHAL 55
M ++G T+N LI C G + A +++ ++ KL F + N +L+ L
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTF-----TLNTVLYNL 460
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++Y+ + + Q G+ PD ++Y VM A ++ + RL DEM +P
Sbjct: 461 CKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSI 520
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ L + + A++ LN + E G P + ++ + G+L+ F ++
Sbjct: 521 STYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNK 580
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PDVV ++ G+L+KA LF+ + KG+ +V TYN++I+ C G
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A +ME+RG P+ YN ++S L AG+ EA ++ + E G
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESG 690
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 145/320 (45%), Gaps = 42/320 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C G +G AR ++ R K + RP +YN ++ A +
Sbjct: 234 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRP---TYNTLVSAYARLGWI 290
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG-FSPDFHTYNI 120
K V + M+ G+ PD+ TYN++ + GK+D+ RL DEM R G PD TYN
Sbjct: 291 KQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNT 350
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L K AL LL M+E G +++ ++ GL + G L+ ++MA+ G
Sbjct: 351 LADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDG 410
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y +I ++ AG + KA L D M+ +G + FT N+++ C +++EA
Sbjct: 411 LAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQ 470
Query: 241 TMMKEMESRG-----------------------------------CNPNFLVYNTLVSNL 265
+++ RG P+ YNTL+ L
Sbjct: 471 GLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGL 530
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+L EA + + ++EKG
Sbjct: 531 SRMGRLKEAIDKLNELMEKG 550
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 124/278 (44%), Gaps = 44/278 (15%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A ++ + I+ KL P ++YN ++ L + + K ++ ++G PD TYNI
Sbjct: 504 ALRLWDEMIEKKL---TPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNI 560
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL---GKGDKPLAALNLLNHMK 142
++ A + G L+ + ++M + F PD T N L++ L GK DK AL L
Sbjct: 561 IIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDK---ALKLFESWV 617
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G V+ + TL+ + + G++D +FF +M +G PD Y V++++ AG E
Sbjct: 618 EKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTE 677
Query: 203 KAQDLFDGMITKGQLPNVFT-----------------------------------YNSMI 227
+AQ++ + G L F+ Y ++
Sbjct: 678 EAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLV 737
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
G C +G+F EA ++ EM +G + + Y TL+ L
Sbjct: 738 NGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGL 775
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 1/181 (0%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ +T+N+L+H AL+ L+ M+ G P + + TL++ R G L +
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
M G P Y ++++Y G +++A + + M G P+++TYN + G C
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321
Query: 233 AGKFDEACTMMKEMESRGC-NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
AGK DEA + EME G P+ + YNTL ++A ++ M EKG LV
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381
Query: 292 S 292
+
Sbjct: 382 T 382
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 73/183 (39%), Gaps = 2/183 (1%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDK--PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
R P N +L L + P A+L+ + + P+ F L+ G
Sbjct: 160 RVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGT 219
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
L M G PD V Y ++ ++ G L +A+ L M G P TYN+
Sbjct: 220 LADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNT 279
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + G +A +++ M + G P+ YN L + L AGK+ EA + M G
Sbjct: 280 LVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLG 339
Query: 286 KYI 288
+
Sbjct: 340 TLL 342
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 126/239 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYNA++ L+ + E ++ +M G PD TY++++ A + +++ ++ +EM
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 827
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ + TYN ++ L K A+NL + GF P+ + L+DGL + GN+
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 887
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + FDEM GC P+ Y +++ Y AG+ EK +LF+ M+ +G P++ +Y +
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVV 947
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C G+ ++ + K++ G P+ + YN L+ L +G+L EA + M +KG
Sbjct: 948 IDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++N LIC + L E F + K P + +Y+ IL A+ + + +
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++M ++GY +TYN ++ + LD+ L ++ GFSP TY LL
Sbjct: 821 LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K A L + M E G +P+ + L++G AG+ + F+ M +G PD
Sbjct: 881 LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ YTV+I + A G L F + G P++ TYN +I G +G+ +EA ++
Sbjct: 941 IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ME +G PN YN+L+ L AGK AEA ++ ++ KG
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ L+ + +Y Q+ EG++P TY ++ + G ++ L DEM
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897
Query: 107 GRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
G P+ YNILL+ + G +K L M E G +P + +T ++D L
Sbjct: 898 LECGCEPNCAIYNILLNGYRIAGDTEK---VCELFESMVEQGMNPDIKSYTVVIDTLCAD 954
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G L+ +F ++ + G PD++ Y ++I +G LE+A L++ M KG PN++TY
Sbjct: 955 GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS+I AGK EA M +E+ ++G PN YN L+ +G A M+
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIV 1074
Query: 284 KG 285
G
Sbjct: 1075 GG 1076
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 127/265 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + + + + + F P +Y +L LL
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ +M + G P+ YNI++ G ++ L + M G +PD +Y +
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + L+ + ++G +P ++ + L+ GL ++G L+ +++M KG
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++ Y +I AG+ +A +++ ++ KG PNVFTYN++IRG+ ++G + A
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 1066
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
M GC PN Y L + +
Sbjct: 1067 AAYGRMIVGGCRPNSSTYMQLPNQM 1091
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ L+ CG+ G +R V E + K + SY A + AL + + V+ +M
Sbjct: 313 TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G P +YN ++ + + ++ L + M G +P+ +T+ + ++ GK +
Sbjct: 373 KQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L AL MK G P V+ ++ GL++ G L K F E+ G PD + YT+M
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I A ++A +F MI P+V NS+I AG+ +EA + E++
Sbjct: 493 IKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL 552
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P YNTL++ L GK+ E +++ M
Sbjct: 553 EPTDCTYNTLLAGLGREGKVKEVMQLLEGM 582
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G A T+N LI + G R+ ++ + P +Y+ ++ A R
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + +M G P++ +Y I + + G+L++ +R+L +M G PD T +
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTV 281
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +L + A ++ MK P + + TL+D +G+ + ++ + G
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+VV YT + + G +++A D+FD M KG +P ++YNS+I GF A +F+ A
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRAL 401
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M G PN + ++ +G+ +A + M KG +V+
Sbjct: 402 ELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVA 453
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T RT+++L+ G+ A VV + + RP SY + L +
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M +EG PD++T +++ G+L + +M S PD TY
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G + + N +K G++ +V+ +T +D L + G +D FDEM KG
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P Y +I+ ++ A +A +LF+ M G PN +T+ I +G+ +A
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+G P+ + N ++ L G+L A V + G
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG 481
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 95/207 (45%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y+ M +G PD++ N V+ + G+L R+ E+ G SPD TY +++ K
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A+ + M E P VL +L+D L +AG + F E+ P
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ G++++ L +GM + PN+ TYN+++ C G+ + A M+ M
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT 618
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEA 274
GC P+ YNT++ L +L EA
Sbjct: 619 MNGCMPDLSSYNTVMYGLVKEDRLDEA 645
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 124/262 (47%), Gaps = 1/262 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ G + K ++R+ K P + NA+L+ L + + + V+ ++ G +PD
Sbjct: 427 GKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDN 486
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TY +++ + D+ ++ EM + +PD N L+ +L K + A +
Sbjct: 487 ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+KE+ +P+ + TL+ GL R G + + M + P+++ Y ++ GE
Sbjct: 547 LKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGE 606
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A D+ M G +P++ +YN+++ G + DEA M +M+ + P++ T
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQMK-KVLAPDYATVCT 665
Query: 261 LVSNLRNAGKLAEAHEVIRHMV 282
++ + +G + EA +R +
Sbjct: 666 ILPSFVRSGLMKEALHTVREYI 687
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%)
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
H L+ + G S +YN L+ L D A L + MK +G DP + ++D
Sbjct: 751 HELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ ++ ++ +EM NKG V Y +I+ + + L++A +L+ ++++G P
Sbjct: 811 MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPT 870
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TY ++ G G ++A + EM GC PN +YN L++ R AG + E+
Sbjct: 871 PCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFE 930
Query: 280 HMVEKG 285
MVE+G
Sbjct: 931 SMVEQG 936
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ V+ M + ++ T+ V A G L L M +G + +TYN L++
Sbjct: 120 VAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIY 179
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K A+++ M G P+V ++ LM + + + EM +G P
Sbjct: 180 FLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRP 239
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+V YT+ I AG LE+A + M +G P+V T +I+ C AG+ +A +
Sbjct: 240 NVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVF 299
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+M++ P+ + Y TL+ ++G E+ + G ++VS
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVS 348
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 127/320 (39%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIEN N LI + G + + F + K N P +YN +L L +
Sbjct: 512 MIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGK 571
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + + M+ + P+I+TYN V+ + G+++ +L M +G PD +YN
Sbjct: 572 VKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNT 631
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV------------------GFDPSVLHFT-------- 154
+++ L K D+ A + MK+V G LH
Sbjct: 632 VMYGLVKEDRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPD 691
Query: 155 ---------TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+LM+G+ + + F + +A+ G + D + + +I E A
Sbjct: 692 SKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAH 751
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L G +YN++I G D A + EM+ GC+P+ Y+ ++ +
Sbjct: 752 ELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAM 811
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ ++ + ++ M KG
Sbjct: 812 GKSMRIEDMLKIQEEMHNKG 831
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 137/269 (50%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C E A ++V++F + SYNA++ L+ + E ++ +M G
Sbjct: 44 LCKHKEALAAHELVKKF---ENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGC 100
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD TY++++ A + +++ ++ +EM G+ + TYN ++ L K A+N
Sbjct: 101 DPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAIN 160
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + GF P+ + L+DGL + GN++ + FDEM GC P+ Y +++ Y
Sbjct: 161 LYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYR 220
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AG+ EK +LF+ M+ +G P++ +Y +I C G+ ++ + K++ G P+ +
Sbjct: 221 IAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLI 280
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ L +G+L EA + M +KG
Sbjct: 281 TYNLLIHGLGKSGRLEEALSLYNDMEKKG 309
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++N LIC + L E F + K P + +Y+ IL A+ + + +
Sbjct: 64 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 123
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++M ++GY +TYN ++ + LD+ L ++ GFSP TY LL
Sbjct: 124 LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 183
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K A L + M E G +P+ + L++G AG+ + F+ M +G PD
Sbjct: 184 LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 243
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ YTV+I + A G L F + G P++ TYN +I G +G+ +EA ++
Sbjct: 244 IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 303
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ME +G PN YN+L+ L AGK AEA ++ ++ KG
Sbjct: 304 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 344
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 114/239 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ L+ + +Y Q+ EG++P TY ++ + G ++ L DEM
Sbjct: 141 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 200
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ YNILL+ L M E G +P + +T ++D L G L
Sbjct: 201 LECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRL 260
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ +F ++ + G PD++ Y ++I +G LE+A L++ M KG PN++TYNS+
Sbjct: 261 NDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSL 320
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I AGK EA M +E+ ++G PN YN L+ +G A M+ G
Sbjct: 321 ILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGG 379
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 127/265 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + + + + + F P +Y +L LL
Sbjct: 130 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 189
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ +M + G P+ YNI++ G ++ L + M G +PD +Y +
Sbjct: 190 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 249
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + L+ + ++G +P ++ + L+ GL ++G L+ +++M KG
Sbjct: 250 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 309
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++ Y +I AG+ +A +++ ++ KG PNVFTYN++IRG+ ++G + A
Sbjct: 310 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 369
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
M GC PN Y L + +
Sbjct: 370 AAYGRMIVGGCRPNSSTYMQLPNQM 394
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 35/217 (16%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+ + SG D + ++ L K + LAA L+ + +G + L+ GL
Sbjct: 23 ENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALICGLVDE 82
Query: 164 GNLDACKYFFDEMANKGCMPD-----------------------------------VVCY 188
+D + F EM GC PD V Y
Sbjct: 83 DLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTY 142
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I+ + + L++A +L+ ++++G P TY ++ G G ++A + EM
Sbjct: 143 NTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLE 202
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN +YN L++ R AG + E+ MVE+G
Sbjct: 203 CGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQG 239
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 57/131 (43%)
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+LM+G+ + + F + +A+ G + D + + +I E A +L
Sbjct: 4 SLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENL 63
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +YN++I G D A + EM+ GC+P+ Y+ ++ + + ++ +
Sbjct: 64 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 123
Query: 275 HEVIRHMVEKG 285
++ M KG
Sbjct: 124 LKIQEEMHNKG 134
>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
Length = 755
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 153/358 (42%), Gaps = 76/358 (21%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T+ +I C V A+ V ++ I + +P +YN ++H L
Sbjct: 187 MMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGV---KPDNGTYNCLIHGYLS 243
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--------CAKYRL---------------- 93
++K + + ++MS G PD +TY +++ C + RL
Sbjct: 244 TGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAI 303
Query: 94 -----------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
G L + H LD M +G SP+ +NI+ K A+++ N M+
Sbjct: 304 YAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMR 363
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G P V+ F L+D L + G +D F++M N+G P++ ++ ++ G+ E
Sbjct: 364 QQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWE 423
Query: 203 KAQDLF-----------------------------------DGMITKGQLPNVFTYNSMI 227
KA++LF D MI G PNV +YN+++
Sbjct: 424 KAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLV 483
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C+ G+ DEA ++ M S G PN Y L+ A ++ +A+ + R M+ KG
Sbjct: 484 AGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKG 541
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G P +N +I G K F++ P +Y ++ L +
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+QQM D G PD TYN ++ GK + ++L+EM G PD TY +
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L K + A + M G P V + L+ G + G L F D M G
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + +M +Y +E+A +F+ M +G P+V ++ ++I C G+ D+A
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M + G PN V+++LV L GK +A E+ ++++G
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 113/216 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +G +PD++++ ++ A +LG++D ++M G +P+ ++ L++ L
Sbjct: 358 IFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLC 417
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A L + + G + F TLM L G + + D M G P+V+
Sbjct: 418 TVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVI 477
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ + G +++A L D M++ G PN FTY ++RG+C A + D+A ++ +EM
Sbjct: 478 SYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREM 537
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+G P YNT++ L G+ +EA+E+ +M+
Sbjct: 538 LMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMI 573
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 133/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG R FNI+ C + + + + F K + P S+ A++ AL + +
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM +EG P+I ++ ++ +GK ++ L E+ G D +N
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A L++ M VG P+V+ + TL+ G G +D D M + G
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ YT+++ Y A ++ A LF M+ KG P V TYN+++ G G+F EA
Sbjct: 507 LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEAN 566
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M + + YN +++ L + EA ++ R + K + V+
Sbjct: 567 ELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVT 618
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 1/210 (0%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP+ TY+I++ R+G+L+ + ++G+ + + LL L + A +
Sbjct: 87 APNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATD 146
Query: 137 -LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL M E G P V+ + T+++G R G ++ F EM ++G P+VV YT +I
Sbjct: 147 ILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A +++A+ +F MI +G P+ TYN +I G+ GK+ E M++EM + G P+
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y L+ L G+ EA M KG
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKG 296
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 88/184 (47%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL M G PD YN +++ + + A NL M + G P+V+ +TT++DGL
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLC 207
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A +D K F +M ++G PD Y +I Y++ G+ ++ + + M T G P+
Sbjct: 208 KAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCI 267
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY ++ C G+ EA M +G P+ +Y L+ G L+E H + M
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327
Query: 282 VEKG 285
V G
Sbjct: 328 VGNG 331
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 124/289 (42%), Gaps = 10/289 (3%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
+++ G A FN L+C G V A+++++ I+ RP SYN ++ H L
Sbjct: 432 VLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIR---VGVRPNVISYNTLVAGHCL 488
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
G + + M G P+ TY I++ + ++D + L EM G +P
Sbjct: 489 TG--RIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVV 546
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN +LH L + + A L +M + + +++GL + +D F
Sbjct: 547 ATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRR 606
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +K D V + +MI + + G E A DLF + G +P+V TY + G
Sbjct: 607 LCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGS 666
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + ME G PN + N LV L + G ++ A + + EK
Sbjct: 667 LGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEK 715
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G P++++YN ++ G++D+ +LLD M +G P+ TY ILL K + A
Sbjct: 471 GVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDA 530
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+L M G P V + T++ GL + G + M N D+ Y +++
Sbjct: 531 YSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNG 590
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+++A +F + +K + T+N MI G+ ++A + + + G P+
Sbjct: 591 LCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPD 650
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y + NL G L E + M + G
Sbjct: 651 VVTYRLIAENLIEEGSLGEFDGLFSAMEKSG 681
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 124/291 (42%), Gaps = 10/291 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++N L+ C G + A K+++ + + L +P + +Y +L
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL---KPNEFTYTILLRGYCK 523
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ ++++M +G P + TYN ++ ++ G+ + + L M S D +T
Sbjct: 524 ARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYT 583
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L+ L K + A + + + F ++ L + G + F ++
Sbjct: 584 YNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATIS 643
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +PDVV Y ++ + I G L + LF M G PN N+++R G
Sbjct: 644 AYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDIS 703
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
A + +++ + NF + + S L + E + + EK +++
Sbjct: 704 RAGVYLYKLDEK----NFSLEASTTSMLISLYSRGEYQPHAKSLPEKYRFL 750
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 75/159 (47%), Gaps = 7/159 (4%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK---YFFDEMA---NKGCMPDVVC 187
AL L + + SV F L+ +SRAG A + F MA + P+
Sbjct: 33 ALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACT 92
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC-TMMKEM 246
Y+++I + G LE F ++ G NV + +++G C A + DEA ++ M
Sbjct: 93 YSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRM 152
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + YNT+++ G++ +A+ + M+++G
Sbjct: 153 SEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG 191
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 130/241 (53%), Gaps = 4/241 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVY--QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+YN ++ L + +K++E + ++M +EGY PD TYN ++ +LG + ++L
Sbjct: 287 TYNTLICGLC--KNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILR 344
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+ GF PD TY L++ L + A+N+ N E G P+++ TL+ GLS+ G
Sbjct: 345 DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQG 404
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ +EM+ GC PD+ Y ++I G + A +L I KG LP+VFT+N
Sbjct: 405 LILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFN 464
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I G+C K D A ++ M + G +P+ + YN++++ L AGK + + M+EK
Sbjct: 465 TLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK 524
Query: 285 G 285
G
Sbjct: 525 G 525
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 147/294 (50%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G+ T+N +I ++G+ + + F P +++Y ++++ L
Sbjct: 311 MVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGD 370
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V+ + ++G P+++ N ++ + G + Q +L++EM +G SPD TYN+
Sbjct: 371 IDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNL 430
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K A NL+ G P V F TL+DG + LD D M N G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y ++ AG+ E F M+ KG +PN+ TYN + FC A K +EA
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+++EM+++G P+ + + TL+ + G L A+++ + + E+ K+ H ++ +
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATY 604
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G ++ V+ F + FN P SYNAI++ L+ R + VY +M D+G PD+
Sbjct: 87 GRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDV 146
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
T+ I M + R + RLL+ M G Y ++ + + + A L
Sbjct: 147 YTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEE 206
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M +G P ++ F L+ L R G++ + +++ +G P++ + I +
Sbjct: 207 MLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAM 266
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L +A L DG + +G P+V TYN++I G C K EA +++M + G P+ YN+
Sbjct: 267 LNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNS 325
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ G + A +++R KG
Sbjct: 326 IIDGYCKLGMMQNADQILRDGAFKG 350
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 1/239 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++H L + E + ++ G +P++ T NI + + L++ RLLD +
Sbjct: 218 AFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV 277
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
GR G +PD TYN L+ L K K + A + L M G++P + +++DG + G +
Sbjct: 278 GR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMM 336
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ A KG +PD Y +I G++++A ++F+ + KG PN+ N++
Sbjct: 337 QNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTL 396
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++G G +A +M EM GC+P+ YN +++ L G +++A ++ + KG
Sbjct: 397 VKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKG 455
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 16/291 (5%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQ 60
E+GF T T+ +I G G + E ++++ N N +L + +R
Sbjct: 33 EDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRM-------NIDNGLLEGVYIGAMRN 85
Query: 61 Y----KLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
Y K+ E V +++M P + +YN +M DQ H++ M G PD
Sbjct: 86 YGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPD 145
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+T+ I + + +P AA LLN+M G + S + + T++ G + F+
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM G PD++ + +I + G +++++ L + ++ +G PN+FT N I+GFC
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EA ++ + RG P+ + YNTL+ L K+ EA +R MV +G
Sbjct: 266 MLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 124/286 (43%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG T+N++I ++G I + P ++N ++ +
Sbjct: 416 MSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G +PD++TYN ++ + GK + M G P+ TYNI
Sbjct: 476 LDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNI 535
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L K K ALNL+ M+ G P V++F TLM G G+LD F + +
Sbjct: 536 LTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQY 595
Query: 181 CMPDVVC-YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+ Y +MI ++ + A+ LF+ M G P+ +TY MI GFC G +
Sbjct: 596 KFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSG 655
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +G P+ + +++ L ++ EA +I MV KG
Sbjct: 656 YSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKG 701
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 106/258 (41%), Gaps = 42/258 (16%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I G TFN LI C ++ A ++V+R + P +YN+IL+ L
Sbjct: 452 IAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGV---SPDVITYNSILNGLCKA 508
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD---- 114
+Y+ + ++ M ++G P+I+TYNI+ + + K+++ L++EM G +PD
Sbjct: 509 GKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNF 568
Query: 115 --------------------------------FHTYNILLHVLGKGDKPLAALNLLNHMK 142
TYNI+++ A L N M
Sbjct: 569 GTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMC 628
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E GF P + ++DG + GN+++ F KG +P + + ++ +
Sbjct: 629 ENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVH 688
Query: 203 KAQDLFDGMITKGQLPNV 220
+A + M+ KG +P V
Sbjct: 689 EAVGIIHLMVHKGIVPEV 706
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 84/211 (39%), Gaps = 3/211 (1%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P +L ++ KY+ L GF TY ++ LG + A
Sbjct: 2 SPALLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEE 61
Query: 137 LLNHMKEVGFDPSVLH--FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+L + + D +L + M R G + F+ M C P V Y ++
Sbjct: 62 VLAETR-MNIDNGLLEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNI 120
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ ++A ++ M KG +P+V+T+ ++ FC + A ++ M S+GC +
Sbjct: 121 LVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESS 180
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T++ EAHE+ M+ G
Sbjct: 181 AVAYCTVIGGFYEENHRVEAHELFEEMLGLG 211
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 145/276 (52%), Gaps = 6/276 (2%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI C + A +V++R ++SK +F P +YN ++ +L + L V
Sbjct: 157 YNALINGFCKMNRIDDATRVLDR-MRSK--DFSPDTVTYNIMIGSLCSRGKLDLALKVLD 213
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
Q+ + P ++TY I++ A G +D+ +LLDEM G PD TYN ++ + K
Sbjct: 214 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEG 273
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A ++ +++ G +P V+ + L+ L G + + +M ++ C P+VV Y+
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++IT+ G++E+A +L M KG P+ ++Y+ +I FC G+ D A ++ M S
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + YNT+++ L GK +A E+ + E G
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 142/292 (48%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M F T+NI+I C+ G++ LA KV+++ + N +P +Y ++ A +
Sbjct: 180 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSD---NCQPTVITYTILIEATML 236
Query: 57 --GIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G+ + KL++ +M G PD+ TYN ++ + G +D+ ++ + G P
Sbjct: 237 EGGVDEALKLLD----EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEP 292
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YNILL L K L+ M DP+V+ ++ L+ L R G ++
Sbjct: 293 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 352
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M KG PD Y +I ++ G L+ A + + MI+ G LP++ YN+++ C
Sbjct: 353 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 412
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK D+A + ++ GC+PN YNT+ S L ++G A +I MV G
Sbjct: 413 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNG 464
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 118/228 (51%), Gaps = 6/228 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD+ YN ++ ++ ++D R+LD M FSPD TYNI++ L K AL +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ + P+V+ +T L++ G +D DEM ++G PD+ Y +I
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +++A ++ + KG P+V +YN ++R GK++E +M +M S C+PN +
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
Y+ L++ L GK+ EA +++ M EKG Y L++ F R R
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 379
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
+++E+F + +F +YNA+++ + + V +M + ++PD +TYNI++
Sbjct: 144 EILEKFGQPDVF-------AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 196
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
+ GKLD ++LD++ P TY IL+ AL LL+ M G
Sbjct: 197 GSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLK 256
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + + T++ G+ + G +D + KGC PDV+ Y +++ + + G+ E+ + L
Sbjct: 257 PDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 316
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
M ++ PNV TY+ +I C GK +EA ++K M+ +G P+ Y+ L++
Sbjct: 317 MTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR 376
Query: 268 AGKLAEAHEVIRHMVEKG 285
G+L A E + M+ G
Sbjct: 377 EGRLDVAIEFLETMISDG 394
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 139/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N +I + G+ + E +L P SYN +L ALL +
Sbjct: 250 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGK 309
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +M E P+++TY+I++ R GK+++ LL M G +PD ++Y+
Sbjct: 310 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 369
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + A+ L M G P ++++ T++ L + G D F ++ G
Sbjct: 370 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 429
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ Y M ++ ++G+ +A + M++ G P+ TYNSMI C G D+A
Sbjct: 430 CSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAF 489
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M S +P+ + YN ++ A ++ +A +V+ MV G
Sbjct: 490 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNG 534
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 34/224 (15%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPD----------FHT------------------------ 117
R G + LL+ M R G++PD F T
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVFA 156
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K ++ A +L+ M+ F P + + ++ L G LD D++
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C P V+ YT++I + + G +++A L D M+++G P++FTYN++IRG C G D
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A M++ +E +GC P+ + YN L+ L N GK E +++ M
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 320
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL---IEWVY 68
T++ILI T G + + K P SY+ ++ A R+ +L IE++
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF--CREGRLDVAIEFLE 388
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+SD G PDI+ YN V+ + GK DQ + ++G G SP+ +YN + L
Sbjct: 389 TMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 447
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL+++ M G DP + + +++ L R G +D +M + P VV Y
Sbjct: 448 GDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTY 507
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+++ + A +E A D+ D M+ G PN TY +I G AG EA + ++
Sbjct: 508 NIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G A +++ LI C G + +A + +E I P +YN +L L
Sbjct: 355 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL---PDIVNYNTVLATLCK 411
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDEMGRSGFSPDFH 116
+ ++ ++ + G +P+ +YN + A + G K+ H +L EM +G PD
Sbjct: 412 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMVSNGIDPDEI 470
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN ++ L + A LL M+ F PSV+ + ++ G +A ++ D M
Sbjct: 471 TYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSM 530
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
GC P+ YTV+I AG +A +L + ++
Sbjct: 531 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 566
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ +L+LL M G++P V+ T L+ G N+ E+ K PDV Y +
Sbjct: 102 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVFAYNAL 160
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + ++ A + D M +K P+ TYN MI C GK D A ++ ++ S C
Sbjct: 161 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNC 220
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + Y L+ G + EA +++ M+ +G
Sbjct: 221 QPTVITYTILIEATMLEGGVDEALKLLDEMLSRG 254
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R+GN + + M KG PDV+ T +I + + KA + + + GQ P+VF
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQ-PDVF 155
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
YN++I GFC + D+A ++ M S+ +P+ + YN ++ +L + GKL A +V+ +
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 282 V 282
+
Sbjct: 216 L 216
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 126/239 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYNA++ L+ + E ++ +M G PD TY++++ A + +++ ++ +EM
Sbjct: 768 SYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEM 827
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ + TYN ++ L K A+NL + GF P+ + L+DGL + GN+
Sbjct: 828 HNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNI 887
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + FDEM GC P+ Y +++ Y AG+ EK +LF+ M+ +G P++ +Y +
Sbjct: 888 EDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVV 947
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C G+ ++ + K++ G P+ + YN L+ L +G+L EA + M +KG
Sbjct: 948 IDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 136/281 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++N LIC + L E F + K P + +Y+ IL A+ + + +
Sbjct: 761 GVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDM 820
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++M ++GY +TYN ++ + LD+ L ++ GFSP TY LL
Sbjct: 821 LKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDG 880
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K A L + M E G +P+ + L++G AG+ + F+ M +G PD
Sbjct: 881 LLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPD 940
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ YTV+I + A G L F + G P++ TYN +I G +G+ +EA ++
Sbjct: 941 IKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYN 1000
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ME +G PN YN+L+ L AGK AEA ++ ++ KG
Sbjct: 1001 DMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 118/242 (48%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ L+ + +Y Q+ EG++P TY ++ + G ++ L DEM
Sbjct: 838 TYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEM 897
Query: 107 GRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
G P+ YNILL+ + G +K L M E G +P + +T ++D L
Sbjct: 898 LECGCEPNCAIYNILLNGYRIAGDTEK---VCELFESMVEQGMNPDIKSYTVVIDTLCAD 954
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G L+ +F ++ + G PD++ Y ++I +G LE+A L++ M KG PN++TY
Sbjct: 955 GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTY 1014
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS+I AGK EA M +E+ ++G PN YN L+ +G A M+
Sbjct: 1015 NSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIV 1074
Query: 284 KG 285
G
Sbjct: 1075 GG 1076
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 127/265 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + + + + + F P +Y +L LL
Sbjct: 827 MHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGN 886
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ +M + G P+ YNI++ G ++ L + M G +PD +Y +
Sbjct: 887 IEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTV 946
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + L+ + ++G +P ++ + L+ GL ++G L+ +++M KG
Sbjct: 947 VIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLEEALSLYNDMEKKG 1006
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++ Y +I AG+ +A +++ ++ KG PNVFTYN++IRG+ ++G + A
Sbjct: 1007 IAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALIRGYSVSGSPENAF 1066
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
M GC PN Y L + +
Sbjct: 1067 AAYGRMIVGGCRPNSSTYMQLPNQM 1091
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 126/270 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ L+ CG+ G +R V E + K + SY A + AL + + V+ +M
Sbjct: 313 TYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEM 372
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G P +YN ++ + + ++ L + M G +P+ +T+ + ++ GK +
Sbjct: 373 KQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGES 432
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L AL MK G P V+ ++ GL++ G L K F E+ G PD + YT+M
Sbjct: 433 LKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMM 492
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I A ++A +F MI P+V NS+I AG+ +EA + E++
Sbjct: 493 IKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNL 552
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P YNTL++ L GK+ E +++ M
Sbjct: 553 EPTDCTYNTLLAGLGREGKVKEVMQLLEGM 582
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 134/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G A T+N LI + G R+ ++ + P +Y+ ++ A R
Sbjct: 162 MKEAGIVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRD 221
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + +M G P++ +Y I + + G+L++ +R+L +M G PD T +
Sbjct: 222 AETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTV 281
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +L + A ++ MK P + + TL+D +G+ + ++ + G
Sbjct: 282 LIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADG 341
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+VV YT + + G +++A D+FD M KG +P ++YNS+I GF A +F+ A
Sbjct: 342 YNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQYSYNSLISGFLKADRFNRAL 401
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M G PN + ++ +G+ +A + M KG +V+
Sbjct: 402 ELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYELMKSKGIVPDVVA 453
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 129/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T RT+++L+ G+ A VV + + RP SY + L +
Sbjct: 197 MAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGR 256
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M +EG PD++T +++ G+L + +M S PD TY
Sbjct: 257 LEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYIT 316
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G + + N +K G++ +V+ +T +D L + G +D FDEM KG
Sbjct: 317 LLDKCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKG 376
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P Y +I+ ++ A +A +LF+ M G PN +T+ I +G+ +A
Sbjct: 377 IIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKAL 436
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+G P+ + N ++ L G+L A V + G
Sbjct: 437 KRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMG 481
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 96/207 (46%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y+ M +G PD++ N V+ + G+L R+ E+ G SPD TY +++ K
Sbjct: 439 YELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSK 498
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A+ + M E P VL +L+D L +AG + F E+ P
Sbjct: 499 ASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCT 558
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ G++++ L +GM + PN+ TYN+++ C G+ + A M+ M
Sbjct: 559 YNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMT 618
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEA 274
GC P+ YNT++ L G+L EA
Sbjct: 619 MNGCMPDLSSYNTVMYGLVKEGRLDEA 645
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 125/262 (47%), Gaps = 1/262 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ G + K ++R+ K P + NA+L+ L + + + V+ ++ G +PD
Sbjct: 427 GKSGESLKALKRYELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDN 486
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TY +++ + D+ ++ EM + +PD N L+ +L K + A +
Sbjct: 487 ITYTMMIKCCSKASNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYE 546
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+KE+ +P+ + TL+ GL R G + + M + P+++ Y ++ GE
Sbjct: 547 LKEMNLEPTDCTYNTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGE 606
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A D+ M G +P++ +YN+++ G G+ DEA M +M+ + P++ T
Sbjct: 607 VNYALDMLYSMTMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQMK-KVLAPDYATVCT 665
Query: 261 LVSNLRNAGKLAEAHEVIRHMV 282
++ + +G + EA +R +
Sbjct: 666 ILPSFVRSGLMKEALHTVREYI 687
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 90/186 (48%)
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
H L+ + G S +YN L+ L D A L + MK +G DP + ++D
Sbjct: 751 HELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ ++ ++ +EM NKG V Y +I+ + + L++A +L+ ++++G P
Sbjct: 811 MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPT 870
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TY ++ G G ++A + EM GC PN +YN L++ R AG + E+
Sbjct: 871 PCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFE 930
Query: 280 HMVEKG 285
MVE+G
Sbjct: 931 SMVEQG 936
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ V+ M + ++ T+ V A G L L M +G + +TYN L++
Sbjct: 120 VAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLIY 179
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K A+++ M G P+V ++ LM + + + EM +G P
Sbjct: 180 FLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVVGLLGEMEARGVRP 239
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+V YT+ I AG LE+A + M +G P+V T +I+ C AG+ +A +
Sbjct: 240 NVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQILCDAGRLADAKDVF 299
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+M++ P+ + Y TL+ ++G E+ + G ++VS
Sbjct: 300 WKMKASDQKPDRVTYITLLDKCGDSGDSRSVSEIWNALKADGYNDNVVS 348
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 127/320 (39%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIEN N LI + G + + F + K N P +YN +L L +
Sbjct: 512 MIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTYNTLLAGLGREGK 571
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + + M+ + P+I+TYN V+ + G+++ +L M +G PD +YN
Sbjct: 572 VKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTMNGCMPDLSSYNT 631
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV------------------GFDPSVLHFT-------- 154
+++ L K + A + MK+V G LH
Sbjct: 632 VMYGLVKEGRLDEAFWMFCQMKKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPD 691
Query: 155 ---------TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+LM+G+ + + F + +A+ G + D + + +I + E A
Sbjct: 692 SKVDRSSVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAH 751
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L G +YN++I G D A + EM+ GC+P+ Y+ ++ +
Sbjct: 752 ELVKKFENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAM 811
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ ++ + ++ M KG
Sbjct: 812 GKSMRIEDMLKIQEEMHNKG 831
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 151/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K+M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ +M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 149/290 (51%), Gaps = 6/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TFNIL+ C + A+ V+ +K + +P +YN+++
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGI---KPDVFTYNSLMDRYCL 329
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + ++ +S G P+I +Y+I++ ++ K+D+ L EM + PD T
Sbjct: 330 VKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVT 389
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K K AL L++ M + G + + +++D L + +D +M
Sbjct: 390 YNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 449
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G PD+ YT ++ G LE A+ +F+ ++ KG + +V Y +MI+GFC G FD
Sbjct: 450 DEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFD 509
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
E+ ++ +ME GC PN + Y ++ +L + + +A +++R M+ +G +
Sbjct: 510 ESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 144/284 (50%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF ++ LI C G+ A +++ R + KL +P YN I+ ++ ++
Sbjct: 172 GFHLNKVSYGTLINGLCKVGQTSAALQLLRR-VDGKLV--QPNVVMYNTIIDSMCKVKLV 228
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+Y +M +G +PD++TYN ++ +GK+ L ++M +P+ +T+NIL
Sbjct: 229 NEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K + A N+L M + G P V + +LMD ++ K+ F+ ++ +G
Sbjct: 289 VDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGV 348
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++ Y++MI + ++++A +LF M +P+V TYNS+I G C GK A
Sbjct: 349 NPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALK 408
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM RG + + YN+++ L ++ +A ++ M ++G
Sbjct: 409 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEG 452
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+ T LI C G++ A + ++ + F K SY +++ L
Sbjct: 133 ILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVA---LGFHLNKVSYGTLINGLCK 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q + +++ + P+++ YN ++ + ++ +++ L EM G SPD T
Sbjct: 190 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K A +L N M +P+V F L+DG + L K M
Sbjct: 250 YNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMM 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PDV Y ++ Y E+ KA+ +F+ + +G PN+ +Y+ MI GFC K D
Sbjct: 310 KQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVD 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + KEM P+ + YN+L+ L GK++ A +++ M ++G
Sbjct: 370 EAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 120/246 (48%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N +P + IL +L+ Y + +++QM G D++ +I++ +LG+
Sbjct: 67 NPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLS 126
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L ++ + G+ P+ T L+ L + AL + + +GF + + + TL++G
Sbjct: 127 FSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLING 186
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G A + K P+VV Y +I S + +A DL+ M++KG P+
Sbjct: 187 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 246
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TYN++I GFC+ GK +A + +M NPN +N LV +L EA V+
Sbjct: 247 VVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLA 306
Query: 280 HMVEKG 285
M+++G
Sbjct: 307 MMMKQG 312
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 136/297 (45%), Gaps = 38/297 (12%)
Query: 12 TFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNS-YNAILHALLGIRQYKLIEWVYQ 69
TF IL+ C C + G+ K E F + F P + + A++ LL ++ K V+
Sbjct: 191 TFLILVDCLC-KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFG 249
Query: 70 QMSDEGYAPDILTYNIV-------------------MCAKY----------------RLG 94
QM G+ PD + YN + M AK + G
Sbjct: 250 QMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAG 309
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
L++ L M SGF P+ Y L+H K + A +L + M E G+ P V+ T
Sbjct: 310 TLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHT 369
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++DGL ++GN + F+EM GC P+VV YT +I G + A + GMI
Sbjct: 370 VMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G P+ TY ++ GFC G+ DEA ++ E++ +PN +Y++LV+ L + G +
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSV 486
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 7/306 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +FNILI + A V F K +P +++ ++ L
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204
Query: 61 YKLIEWVYQQMSDEGYAP-DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ V+ +M G+ P D + ++ + ++ + + +M + GF PD YN
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K AL +L++M P+ + + L++ L +AG L+ + F MA
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ V YT +I + +G +++A LFD M+ G P+V T+ MI G C +G F++A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSK 293
+EM GC PN + Y T++ L G++A A +++ M+ G YI L+
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 294 FKRYKR 299
F + R
Sbjct: 445 FCKLGR 450
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 128/282 (45%), Gaps = 36/282 (12%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +++ L+ + Y ++++M G AP+ ++NI++ + R + D + M
Sbjct: 121 TYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIM 180
Query: 107 GRSGFSPDFHTYNILLHVLGKG---------------------DKPL------------- 132
R PD HT+ IL+ L K D+ L
Sbjct: 181 KRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKR 240
Query: 133 --AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A + M++ GF P + + T++DGL++AG+ D M K C+P V Y +
Sbjct: 241 VKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGI 300
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ S AG LE+A++LF M G PN Y S+I GF +G+ EAC++ EM G
Sbjct: 301 LVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAG 360
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + + ++ L +G +A + M+ G ++V+
Sbjct: 361 YRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVT 402
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 141/281 (50%), Gaps = 10/281 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD--- 73
+C G + A ++ +R + +P +YN +++ L R+ + +E + + D
Sbjct: 516 LCKTGRLDEACRIFQRMVSE---GCKPDATTYNILINGLCRSRENR-VERAFALLHDLEK 571
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
GY PD +TY + ++G++D+ ++L+E G++ D Y L L +
Sbjct: 572 VGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDR 631
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMI 192
A++L M G P + +++GL + L DACK FFDEM KG P V YT ++
Sbjct: 632 AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACK-FFDEMIGKGQKPTVATYTALV 690
Query: 193 TSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ AG +++A F+ M+ +G+L +V Y+++I GFC A K D A + ++M SRG
Sbjct: 691 QALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGN 750
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P + +L L +GK +A E+++ M G H +
Sbjct: 751 VPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 2/290 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ T T+ IL+ + + G + E F FRP Y +++H +
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K ++ +M + GY PD++T+ +++ + G +Q + +EM R G P+ TY
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + A ++ M G P + + L+DG + G LD DE+
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 181 CMPDVVCYTVMITSYIAAGELEKA-QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P++ Y+ ++ G +EK DLF+ + + S+I G C G+ DEA
Sbjct: 466 SSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEA 525
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKGKYI 288
C + + M S GC P+ YN L++ L R+ E + H +EK Y+
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYL 575
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 145/300 (48%), Gaps = 15/300 (5%)
Query: 1 MIENG-FPTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
MI +G FP + +L C G + A ++++ K + P Y+++++ L
Sbjct: 426 MIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKC---SSSPNLQLYSSLVNGLCD 482
Query: 57 GIRQYKLIEWVYQQ--MSDEGYAPDILTYNIV-MCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G K ++ +++Q + E P + IV +C + G+LD+ R+ M G P
Sbjct: 483 GGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLC---KTGRLDEACRIFQRMVSEGCKP 539
Query: 114 DFHTYNILLHVL--GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
D TYNIL++ L + ++ A LL+ +++VG+ P + +T L GL + G +D
Sbjct: 540 DATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+E +++G DVV YT + T G++++A LF M+ +G P+ Y +I G
Sbjct: 600 MLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLI 659
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
K ++AC EM +G P Y LV L +AG + EA M+ +G+ + V
Sbjct: 660 KVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSV 719
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 16/282 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKS-------KLFNFRPFKNSYNAILH 53
M+ G A T+NILI GL R R ++ + + P +Y +
Sbjct: 532 MVSEGCKPDATTYNILI-----NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCI 586
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L I + + ++ S G+ D++ Y + G++D+ L EM R G +P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D Y +++ L K K A + M G P+V +T L+ L AGN+D + F
Sbjct: 647 DAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706
Query: 174 DEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+ M +G + V+ Y +I + A +++ A LF+ MI++G +P T S+ G
Sbjct: 707 ESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR---NAGKL 271
+GK ++A +++EM + G P+ + ++ LR +GKL
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
W +Q G+ D+ TYN +M Q + + +EM ++G +P+ ++NIL+
Sbjct: 108 WAGEQA---GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSF 164
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-PD 184
+ + A+ MK P + F L+D L +AG + F EM G + PD
Sbjct: 165 ARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+T M+ + + A +++A+++F M G P+ YN+MI G AG EA ++
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYK 298
M ++ C P + Y LV++L AG L A E+ R M G Y L+ F +
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344
Query: 299 R 299
R
Sbjct: 345 R 345
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 10/244 (4%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ A T+ L +C GEV A K++E S+ +N +Y A+ L Q
Sbjct: 573 GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE-ASSRGWNADVV--AYTALCTGLCYQGQV 629
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++Q+M +G APD Y ++ ++ KL+ + DEM G P TY L
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTAL 689
Query: 122 LHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L A + M G SV+ + L+ G +A +DA F++M ++G
Sbjct: 690 VQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P V + + +G+ EKAQ+L M G P+ T+ +++ G K DE+
Sbjct: 750 NVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGL---RKSDESG 806
Query: 241 TMMK 244
++K
Sbjct: 807 KLLK 810
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
H ++ L G A +F G DV Y ++ +A + + + M
Sbjct: 88 HVAAVLRSLKVTGT--AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM 145
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G PN F++N +IR F + D+A T + M+ + C P+ + LV L AG
Sbjct: 146 LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD 205
Query: 272 AEAHEVIRHMVEKG 285
+A EV M+ G
Sbjct: 206 EKAFEVFHEMMAMG 219
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ I+I C V A V ++ I + +P +YN ++H L
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGV---KPNNGTYNCLIHGYLS 412
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q++ + ++MS PD+ TY +++ + GK ++ L D M R G P
Sbjct: 413 TGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTI 472
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I+LH GK +LLN M G P+ F T++ ++ +D + F +M
Sbjct: 473 YGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMK 532
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+VV Y +I + G ++ A F+ MI +G PN +NS++ G C K++
Sbjct: 533 QQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWE 592
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + EM ++G P+ + +NT++ NL G++ EA +I MV G ++S
Sbjct: 593 KVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVIS 647
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQM---SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
SYN +L L R+ + + M D +PD+++YNIV+ + G++D+ + L
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF 216
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
EM G SPD TYN ++ L K + A ++ M E G P+ + + T++DGL +A
Sbjct: 217 LEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
+D + F +M +KG P V Y +I A +++A+ +F MI +G P+ TY
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I G C A D+A + ++M +G P+ L Y ++ L A + A V + M++
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393
Query: 284 KG 285
KG
Sbjct: 394 KG 395
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 3/274 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++NI+I G K F++ P +YN I+ L ++ E V+QQM
Sbjct: 195 SYNIVINGFFNEGQVDKAYSLFLE---MGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQM 251
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++G P+ +TYN ++ + ++D + +M G P TYN ++ L K
Sbjct: 252 VEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAV 311
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + M + G P + + T++DGL +A +D + F +M +KG PD + YT++
Sbjct: 312 DRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTII 371
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I A +++A+ +F MI KG PN TYN +I G+ G+++E +KEM +
Sbjct: 372 IDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDL 431
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y L+ L GK EA + M+ KG
Sbjct: 432 EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 137/287 (47%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G T+N +I C EV A V ++ ++ + +P +YN I+ L
Sbjct: 217 LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGV---KPNNVTYNTIIDGLCKA 273
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++ + E V+Q+M D+G P +TYN ++ + +D+ + +M G PD TY
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N ++ L K A + M + G P L +T ++DGL +A ++D + F +M +
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG P+ Y +I Y++ G+ E+ M P+VFTY ++ C GK +E
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ M +G P+ +Y ++ G L+E H+++ MV G
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANG 500
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 35/286 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG R FN +IC + + +V+ FIK
Sbjct: 496 MVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIK------------------------- 530
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
M +G +P+++TY ++ A +LG++D ++M G +P+ +N
Sbjct: 531 ----------MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L DK L M G P ++ F T++ L + G + + D M G
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y +I + A +++A L DGM++ G PN+ +YN+++ G+C AG+ D A
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ +EM +G P YNT+++ L +G+ +EA E+ +M++ K
Sbjct: 701 CLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRK 746
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 139/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+N +I C EV +A V ++ + + +P +YN I+ L
Sbjct: 251 MVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGV---KPSNVTYNTIIDGLCK 307
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E V+QQM D G PD +TYN ++ + +D+ + +M G PD T
Sbjct: 308 AQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLT 367
Query: 118 YNILL-----------------HVLGKGDKP-LAALNLLNH--------------MKEVG 145
Y I++ ++ KG KP N L H +KE+
Sbjct: 368 YTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMS 427
Query: 146 ---FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+P V + L+D L + G + + FD M KG P V Y +M+ Y G L
Sbjct: 428 AHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALS 487
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ DL + M+ G PN +N++I + DE + +M+ +G +PN + Y TL+
Sbjct: 488 EMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLI 547
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L G++ +A M+ +G
Sbjct: 548 DALCKLGRVDDAVLQFNQMINEG 570
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 109/213 (51%), Gaps = 7/213 (3%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APD TY+IV+ R+G+L+ + ++G+ D N LL L + A++
Sbjct: 81 APDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMH 140
Query: 137 -LLNHMKEVGFDPSVLHFTTLMDGL---SRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
LL M EVG V+ + TL+ GL RA + + + C PDVV Y ++I
Sbjct: 141 VLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVI 200
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G+++KA LF + G P+V TYN++I G C A + D A + ++M +G
Sbjct: 201 NGFFNEGQVDKAYSLF---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVK 257
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + YNT++ L A ++ A V + MV+KG
Sbjct: 258 PNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKG 290
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 121/319 (37%), Gaps = 35/319 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G FN L+ V KV E F++ RP +N +L L +
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M G PD+++YN ++ ++D+ +LLD M +G P+ +YN
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA------------ 168
LLH K + A L M G P V + T+++GL R+G
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745
Query: 169 -----CKY------------------FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
C Y F + + D++ + +MI G E A
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
DLF + G +P+V TY + G +E + ME G PN + N L+ L
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKL 865
Query: 266 RNAGKLAEAHEVIRHMVEK 284
+ G++ A + + EK
Sbjct: 866 LDRGEIPRAGAYLSKLDEK 884
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 126/296 (42%), Gaps = 10/296 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G ++N LI C + A K+++ + + L +P SYN +LH
Sbjct: 636 MVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGL---KPNIVSYNTLLHGYCK 692
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G P + TYN ++ +R G+ + L M +S T
Sbjct: 693 AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICT 752
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+I+L K + A + + + ++ F ++DGL + G + F +
Sbjct: 753 YSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIP 812
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +P VV Y ++ + I G LE+ LF M G PN N++IR G+
Sbjct: 813 ANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIP 872
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
A + +++ + NF + + S L + E + + + EK ++ + +K
Sbjct: 873 RAGAYLSKLDEK----NFSLEASTTSMLISLFSREEYQQHAKSLPEKCRFFNEANK 924
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 128/250 (51%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N +L ++ + + + + +QM G PD+ T IV+ + L ++D
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M GF P+V+ + TL++GL +
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M C P+VV ++ +I S ++ +A ++F MITKG PN+ T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I G C ++ T+M EM P+ NT+V L G +AEAH+V+ M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 283 EKGKYIHLVS 292
+G ++V+
Sbjct: 308 HRGVEPNVVT 317
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A VV+ I + P +YNA++ + + V+ M +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGV---EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
++++YN ++ ++ +D+ L +EM R +P+ TYN L+H L + A++
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P ++ + TL D L + +LD + PD+ YT ++
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG PNV+TYN MI G C G EA + EM GC+PN
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN + + E++ M+ +G
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARG 555
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI GF T+ LI +VG + + N +P ++ ++ +L RQ
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M +G +P+I+TYN ++ +L + L++EM S PD T N
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K A ++++ M G +P+V+ + LMDG +D FD M +K
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+ +V+ Y +I Y ++KA LF+ M + PN TYN++I G C G+ +A
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405
Query: 241 TMMKEMESRGCNPNFLVYNTL 261
++ EM +RG P+ + Y TL
Sbjct: 406 SLFHEMVARGQIPDLVTYRTL 426
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A TF LI C G++G A + ++ I F+P +Y +++ L +
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE---GFQPNVVTYGTLINGLCKVGNT 191
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M P+++ ++ ++ + + ++ + + EM G SP+ TYN L
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L K + L+N M + P V T++D L + G + D M ++G
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV Y ++ + E++ A +FD M+ K + NV +YN++I G+C D+A
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + PN + YNTL+ L + G+L +A + MV +G+ LV+
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 8/273 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
MI G T+N L+ C EV +A KV + + K + N SYN +++
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI----SYNTLINGYC 361
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
I+ +++++MS + P+ +TYN ++ +G+L L EM G PD
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L L K A+ LL ++ +DP + +TT++DG+ RAG L+ + F +
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++KG P+V Y +MI G L +A LF M G PN TYN + RGF +
Sbjct: 482 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 541
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+++EM +RG + + LV L + G
Sbjct: 542 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+ N M PS + F L+ +++ + +M + G PDV ++I
Sbjct: 54 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S ++ A ++ G P+ T+ ++IRG C+ GK EA + +M G P
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 173
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y TL++ L G + A ++R M E+G
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSM-EQG 204
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F LHF TL + LS F+ M +K P V + ++TS
Sbjct: 41 FHSKPLHFNTLDEALST----------FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 90
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L M + G P+V+T +I C + D A + + ++ G P+ + TL+ L
Sbjct: 91 SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
GK+ EA + M+ +G
Sbjct: 151 CVEGKIGEALHLFDKMIGEG 170
>gi|15225031|ref|NP_178657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42570711|ref|NP_973429.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216767|sp|Q9ZUE9.1|PP149_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g06000
gi|4006835|gb|AAC95177.1| hypothetical protein [Arabidopsis thaliana]
gi|110736272|dbj|BAF00106.1| hypothetical protein [Arabidopsis thaliana]
gi|330250896|gb|AEC05990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330250897|gb|AEC05991.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 536
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 1/277 (0%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+TFNILI VG A K +E F P +YN ++ + +++
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 70 QM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ S +PD++TY ++ + GK+ + LLD+M R G P T+N+L+ K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ L A + M G P V+ FT+L+DG R G + ++EM +G P+ Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I + L KA++L + +K +P F YN +I GFC AGK +EA +++EME
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C P+ + + L+ G++ EA + MV G
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 36/240 (15%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ N ++ +L +++ +L DE R D T+NIL+ L K AL LL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M G +P ++ + TL+ G ++ L+ A + F D + C PDVV YT MI+ Y AG
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 200 ELEKAQDLFDG-----------------------------------MITKGQLPNVFTYN 224
++ +A L D MI+ G P+V T+
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I G+C G+ + + +EM +RG PN Y+ L++ L N +L +A E++ + K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 4/247 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A +++ ++ ++ P ++N ++ + E + +M G
Sbjct: 288 CKAGKMREASSLLDDMLRLGIY---PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++T+ ++ R+G++ Q RL +EM G P+ TY+IL++ L ++ L A L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + P + ++DG +AG ++ +EM K C PD + +T++I +
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A +F M+ G P+ T +S++ AG EA + ++ +G + N +
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA-YHLNQIARKGQSNNVVP 523
Query: 258 YNTLVSN 264
T +N
Sbjct: 524 LETKTAN 530
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD- 97
N R +YN + +L + L +++ M +G +P+ ++ + GKL
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
LL G N LL+ L K D+ A+ L + F L+
Sbjct: 157 ATALLLQSFEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
GL G + M+ GC PD+V Y +I + + EL KA ++F + G +
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSV 272
Query: 218 --PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P+V TY SMI G+C AGK EA +++ +M G P + +N LV AG++ A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 276 EVIRHMVEKGKYIHLVS 292
E+ M+ G + +V+
Sbjct: 333 EIRGKMISFGCFPDVVT 349
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|222422989|dbj|BAH19478.1| AT2G06000 [Arabidopsis thaliana]
Length = 536
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 136/277 (49%), Gaps = 1/277 (0%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+TFNILI VG A K +E F P +YN ++ + +++
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 70 QM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ S +PD++TY ++ + GK+ + LLD+M R G P T+N+L+ K
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ L A + M G P V+ FT+L+DG R G + ++EM +G P+ Y
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I + L KA++L + +K +P F YN +I GFC AGK +EA +++EME
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C P+ + + L+ G++ EA + MV G
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIG 482
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 109/240 (45%), Gaps = 36/240 (15%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ N ++ +L +++ +L DE R D T+NIL+ L K AL LL
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M G +P ++ + TL+ G ++ L+ A + F D + C PDVV YT MI+ Y AG
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 200 ELEKAQDLFDG-----------------------------------MITKGQLPNVFTYN 224
++ +A L D MI+ G P+V T+
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I G+C G+ + + +EM +RG PN Y+ L++ L N +L +A E++ + K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 4/247 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A +++ ++ ++ P ++N ++ + E + +M G
Sbjct: 288 CKAGKMREASSLLDDMLRLGIY---PTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCF 344
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++T+ ++ R+G++ Q RL +EM G P+ TY+IL++ L ++ L A L
Sbjct: 345 PDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAREL 404
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + P + ++DG +AG ++ +EM K C PD + +T++I +
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCM 464
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A +F M+ G P+ T +S++ AG EA + ++ +G + N +
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA-YHLNQIARKGQSNNVVP 523
Query: 258 YNTLVSN 264
T +N
Sbjct: 524 PETKTAN 530
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 112/257 (43%), Gaps = 7/257 (2%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD- 97
N R +YN + +L + L +++ M +G +P+ ++ + GKL
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
LL G N LL+ L K D+ A+ L + F L+
Sbjct: 157 ATALLLQSFEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI 213
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
GL G + M+ GC PD+V Y +I + + EL KA ++F + G +
Sbjct: 214 RGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKD-VKSGSV 272
Query: 218 --PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P+V TY SMI G+C AGK EA +++ +M G P + +N LV AG++ A
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 276 EVIRHMVEKGKYIHLVS 292
E+ M+ G + +V+
Sbjct: 333 EIRGKMISFGCFPDVVT 349
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 147/309 (47%), Gaps = 12/309 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ T + L+ C + A +V++ ++ ++P ++ ++H L
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE---MGYKPDTFTFTTLIHGLFL 200
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + QM G PD++TY V+ + G +D LL +M + D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L K ALNL M G P V +++L+ L G +M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P+VV ++ +I +++ G+L +A+ L+D MI + P++FTY+S+I GFCM + D
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
EA M + M S+ C PN + Y+TL+ A ++ E E+ R M ++G Y L+
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 292 SKFKRYKRC 300
F + + C
Sbjct: 441 HGFFQARDC 449
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ ++ C G++ LA ++++ K K+ YN I+ L
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI---EADVVIYNTIIDGLCK 270
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M ++G PD+ TY+ ++ G+ RLL +M +P+ T
Sbjct: 271 YKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT 330
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K K + A L + M + DP + +++L++G LD K+ F+ M
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C P+VV Y+ +I + A +E+ +LF M +G + N TY ++I GF A D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G +PN L YN L+ L GKLA+A V ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 138/299 (46%), Gaps = 14/299 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TF LI V L ++V+R + L +Y +++
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV-------TYGTVVN 231
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + ++M D++ YN ++ + +D L EM G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TY+ L+ L + A LL+ M E +P+V+ F+ L+D + G L + +
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DEM + PD+ Y+ +I + L++A+ +F+ MI+K PNV TY+++I+GFC A
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +E + +EM RG N + Y TL+ A A V + MV G + ++++
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 129/246 (52%), Gaps = 4/246 (1%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RPF + +N +L A+ + +++L+ + +QM G + D+ TY+I + R +L
Sbjct: 78 RPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLA 137
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G+ PD T + LL+ + A+ L++ M E+G+ P FTTL+ G
Sbjct: 138 LAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-P 218
L D+M +GC PD+V Y ++ G+++ A L M KG++
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM-EKGKIEA 256
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V YN++I G C D+A + EM+++G P+ Y++L+S L N G+ ++A ++
Sbjct: 257 DVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 316
Query: 279 RHMVEK 284
M+E+
Sbjct: 317 SDMIER 322
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 6/259 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++ Q L V +M GY PDI+T + ++ ++ L+D+M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ PD T+ L+H L +K A+ L++ M + G P ++ + T+++GL + G++
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D +M DVV Y +I ++ A +LF M KG P+VFTY+S+
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG- 285
I C G++ +A ++ +M R NPN + ++ L+ GKL EA ++ M+++
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 286 -----KYIHLVSKFKRYKR 299
Y L++ F + R
Sbjct: 360 DPDIFTYSSLINGFCMHDR 378
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + IK + P +Y+++++
Sbjct: 319 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 375
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + P+++TY+ ++ + ++++ L EM + G + T
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+H + A + M VG P++L + L+DGL + G L F+ +
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ Y +MI AG++E +LF + KG PNV YN+MI GFC G +
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA +++K+M+ G PN YNTL+ + LR+ + A A E+I+ M
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA-ELIKEM 599
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 133/271 (49%), Gaps = 7/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G A +++ I+ K+ P +++A++ A +++ KL+E +Y +M
Sbjct: 303 LCNYGRWSDASRLLSDMIERKI---NPNVVTFSALIDAF--VKEGKLVEAEKLYDEMIKR 357
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
PDI TY+ ++ +LD+ + + M P+ TY+ L+ K +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L M + G + + +TTL+ G +A + D + F +M + G P+++ Y +++
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G+L KA +F+ + P+++TYN MI G C AGK ++ + + +G +PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNT++S G EA +++ M E G
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 6/228 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P I+ +N ++ A ++ K + L ++M G S D +TY+I ++ + + AL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M ++G++P ++ ++L++G + + D+M G PD +T +I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ +A L D M+ +G P++ TY +++ G C G D A +++K+ME + ++
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
YNT++ L + +A + M KG Y L+S Y R
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 129/277 (46%), Gaps = 7/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T++ LI C + A+ + E I F P +Y+ ++
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYSTLIKGFCK 410
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G + +TY ++ ++ D + +M G P+ T
Sbjct: 411 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNILL L K K A+ + +++ +P + + +++G+ +AG ++ F ++
Sbjct: 471 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 530
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ Y MI+ + G E+A L M G LPN TYN++IR G +
Sbjct: 531 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 590
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ ++KEM S G + LV+N+ + G+L ++
Sbjct: 591 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 626
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 90/192 (46%), Gaps = 1/192 (0%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K+D L +M +S P +N LL + K +K ++L M+ +G + ++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++ R L +M G PD+V + ++ Y + + A L D M+
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+ FT+ ++I G + K EA ++ +M RGC P+ + Y T+V+ L G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 275 HEVIRHMVEKGK 286
+++ M EKGK
Sbjct: 243 LSLLKKM-EKGK 253
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 76/159 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L M + PS++ F L+ +++ + ++M G D+ Y++ I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ +L A + M+ G P++ T +S++ G+C + + +A ++ +M G P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + TL+ L K +EA ++ MV++G LV+
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVT 225
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 61/130 (46%)
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L + LS +D F +M P +V + ++++ + E L + M T G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+++TY+ I FC + A ++ +M G P+ + ++L++ ++ ++++A
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173
Query: 276 EVIRHMVEKG 285
++ MVE G
Sbjct: 174 ALVDQMVEMG 183
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 59/128 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+NI+I + G E F L P +YN ++ + + + ++M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++G P+ TYN ++ A+ R G + L+ EM GF+ D T ++ ++L G
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLD 624
Query: 132 LAALNLLN 139
+ L++L+
Sbjct: 625 KSFLDMLS 632
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 128/250 (51%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N +L ++ + + + + +QM G PD+ T IV+ + L ++D
Sbjct: 68 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 127
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M GF P+V+ + TL++GL +
Sbjct: 128 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 187
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M C P+VV ++ +I S ++ +A ++F MITKG PN+ T
Sbjct: 188 VGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVT 247
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I G C ++ T+M EM P+ NT+V L G +AEAH+V+ M+
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307
Query: 283 EKGKYIHLVS 292
+G ++V+
Sbjct: 308 HRGVEPNVVT 317
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A VV+ I + P +YNA++ + + V+ M +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGV---EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
++++YN ++ ++ +D+ L +EM R +P+ TYN L+H L + A++
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P ++ + TL D L + +LD + PD+ YT ++
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG PNV+TYN MI G C G EA + EM GC+PN
Sbjct: 467 RAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN + + E++ M+ +G
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARG 555
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 126/261 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI GF T+ LI +VG + + N +P ++ ++ +L RQ
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M +G +P+I+TYN ++ +L + L++EM S PD T N
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K A ++++ M G +P+V+ + LMDG +D FD M +K
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+ +V+ Y +I Y ++KA LF+ M + PN TYN++I G C G+ +A
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405
Query: 241 TMMKEMESRGCNPNFLVYNTL 261
++ EM +RG P+ + Y TL
Sbjct: 406 SLFHEMVARGQIPDLVTYRTL 426
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A TF LI C G++G A + ++ I F+P +Y +++ L +
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE---GFQPNVVTYGTLINGLCKVGNT 191
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M P+++ ++ ++ + + ++ + + EM G SP+ TYN L
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L K + L+N M + P V T++D L + G + D M ++G
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV Y ++ + E++ A +FD M+ K + NV +YN++I G+C D+A
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + PN + YNTL+ L + G+L +A + MV +G+ LV+
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 8/273 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
MI G T+N L+ C EV +A KV + + K + N SYN +++
Sbjct: 306 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI----SYNTLINGYC 361
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
I+ +++++MS + P+ +TYN ++ +G+L L EM G PD
Sbjct: 362 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 421
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L L K A+ LL ++ +DP + +TT++DG+ RAG L+ + F +
Sbjct: 422 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 481
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++KG P+V Y +MI G L +A LF M G PN TYN + RGF +
Sbjct: 482 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 541
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+++EM +RG + + LV L + G
Sbjct: 542 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 1/152 (0%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+ N M PS + F L+ +++ + +M + G PDV ++I
Sbjct: 54 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 113
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S ++ A ++ G P+ T+ ++IRG C+ GK EA + +M G P
Sbjct: 114 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 173
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y TL++ L G + A ++R M E+G
Sbjct: 174 NVVTYGTLINGLCKVGNTSAAIRLLRSM-EQG 204
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F LHF TL + LS F+ M +K P V + ++TS
Sbjct: 41 FHSKPLHFNTLDEALST----------FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLL 90
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L M + G P+V+T +I C + D A + + ++ G P+ + TL+ L
Sbjct: 91 SLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGL 150
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
GK+ EA + M+ +G
Sbjct: 151 CVEGKIGEALHLFDKMIGEG 170
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
GCMP VV
Sbjct: 409 RDGCMPSVV 417
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 128/281 (45%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG T+N LI GL + E +P +YNAI++ L +Y
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + +M + G +PD TYN ++ R + + EM R G PD +++ L+
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
V + AL MK+ G P + +T LM G R GN+ DEM +GC+
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DV+ Y ++ L A LFD M+ +G LP+ +T+ ++I G C G +A ++
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M R P+ + YNTL+ G++ +A E+ M+ +
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 427
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 135/287 (47%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G +F+ LI + + F K F P Y ++H R
Sbjct: 249 MLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGY--CRN 306
Query: 61 YKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++E + +M ++G D++ YN ++ + L +L DEM G PDF+T+
Sbjct: 307 GNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTF 366
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+H + AL+L M + P ++ + TL+DG + G ++ +D M +
Sbjct: 367 TTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMIS 426
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ P+ + Y ++I +Y + G + +A L+D MI KG P + T N++I+G+C +G +
Sbjct: 427 RKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSK 486
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + M ++G P+ + YNTL++ + +A I M ++G
Sbjct: 487 ADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 12/305 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+N L+ C A+++ ++ + P S+++++
Sbjct: 214 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVV---PDLVSFSSLIAVFSR 270
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ M G PD + Y ++M R G + + ++ DEM G D
Sbjct: 271 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +L+ L K A L + M E G P FTTL+ G + GN+ F M
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 390
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PD+V Y +I + GE+EKA +L+DGMI++ PN TY +I +C G
Sbjct: 391 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 450
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
EA + M +G P + NT++ +G ++A E + M+ KG Y L+
Sbjct: 451 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 510
Query: 292 SKFKR 296
+ F R
Sbjct: 511 NGFVR 515
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ N +++AL ++ ++ +M G D++TYN ++ A R G L++ +++ M
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM 179
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN +++ L K + A +L M +G P + TL+ R N
Sbjct: 180 ADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNF 239
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
K F EM +G +PD+V ++ +I + L++A F M G +P+ Y +
Sbjct: 240 SEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVL 299
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C G EA + EM +GC + + YNT+++ L L +A ++ MVE+G
Sbjct: 300 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 134/285 (47%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T F++LI T + R+ E F + + N+ N++L L+ I +L V
Sbjct: 46 TNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEV 105
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++++ G ++ T NI++ A + GK D L EM +G D TYN L+ +
Sbjct: 106 HREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR 165
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A ++N M + G PS+ + +++GL + G K EM N G PD
Sbjct: 166 EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 225
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ +A+++F M+ +G +P++ +++S+I F D+A ++M+
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G P+ ++Y L+ G + EA ++ M+E+G + +++
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 330
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 106/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M+ PDI+ YN ++ ++G++++ L D M P+ TY IL++
Sbjct: 385 LFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYC 444
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
A L + M E G P+++ T++ G R+G+ F M KG PD +
Sbjct: 445 SVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHI 504
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I ++ ++KA + M +G LP++ TYN ++ GFC G+ EA ++++M
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G NP+ Y L++ L EA M+++G
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 111/254 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G TF LI + G K + F N +P +YN ++ + +
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ M P+ +TY I++ A +G + + RL D M G P T N
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + A L M G P + + TL++G R N+D + ++M +G
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD++ Y V++ + G +++A+ + MI KG P+ TY ++I G +EA
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAF 593
Query: 241 TMMKEMESRGCNPN 254
EM RG P+
Sbjct: 594 RFHDEMLQRGFAPD 607
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 118/263 (44%), Gaps = 1/263 (0%)
Query: 24 GLAR-KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
G++R +VVE + S N ++ ++ + R+ + ++ + +GY I
Sbjct: 26 GVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINA 85
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
N ++ ++ ++ + E+ RSG + +T NI+++ L K K + L+ M+
Sbjct: 86 CNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEME 145
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G ++ + TL+ R G L+ + MA+KG P + Y +I G
Sbjct: 146 GNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYA 205
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+ + M+ G P+ TYN+++ C F EA + EM +G P+ + +++L+
Sbjct: 206 RAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI 265
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L +A R M + G
Sbjct: 266 AVFSRNRHLDQALVYFRDMKKFG 288
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ ILI C+ G V A ++ + I+ + +P + N ++ +
Sbjct: 435 TYGILINAYCSVGHVSEAFRLWDVMIEKGI---KPTLVTCNTVIKGYCRSGDSSKADEFL 491
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G APD ++YN ++ R +D+ +++M + G PD TYN++++ +
Sbjct: 492 GRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQ 551
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A +L M E G +P +T L++G NL+ F DEM +G PD V
Sbjct: 552 GRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N +I C G A ++++ +P + SY ++
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCK 507
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++ +M D+G P+ +TY ++ + KLD LL+ M RSG P+ T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+H L K + A L M E G P+V+ +T ++DGL + G+ F++M
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC+P+++ Y+ +I + G++E+A++LF + G +P+ TY MI + M+GK +
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
A + M GC P Y L+ L+N LA+
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 143/292 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G TA T I ++G F+ K P +Y A++ L
Sbjct: 311 MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 370
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K+ ++ +MS +G P+ +TYN ++ ++ +L+ MGR+G SP+ TYN
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ P A+ ++N+M + G +++ + T++ G +GN + D M + G
Sbjct: 431 MIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGG 490
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD YT +I + ++E A LF+ M+ G PN TY ++I G+C K D A
Sbjct: 491 CKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTAT 550
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++ M+ GC PN YN L+ L + A E+ + M+E+G + ++V+
Sbjct: 551 SLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 124/283 (43%), Gaps = 7/283 (2%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFN---FRPFKNSYNAILHALLGIRQYK 62
FP T T+N LI E R++ F+ L P +YN ++ + K
Sbjct: 387 FPNTV-TYNALINILVE---NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
V M G++ +++TYN ++ G R+LD M G PD +Y L+
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K +A L N M + G P+ + +T L+DG + LD + M GC
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+V Y V+I A++L MI +G PNV TY +MI G C G A M
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M +GC PN L Y++L+ L GK+ EA + + G
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G PD +Y ++C ++ K++ L +EM G P+ TY L+ K +K
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A +LL HMK G P+V + L+ GL++ N + M +G P+VV YT
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI G A ++F+ MI +G LPN+ TY+S+IR GK +EA + E+E G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y ++ +GK+ A + M++ G
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++ L+ +G+ V++R+ + +P YNA+++AL E + +++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +PD TY ++ R LD ++ ++M + G P+ TY+ L++ L +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L+ M G P+ T + L G + F +M NKGC P+V YT +
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I+ +G L+ A LF M G PN TYN++I + A ++ M GC
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+PN + YN ++ G +A V+ +M+++G +LV+
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+S G + Y+ ++ RLG +D++HR+L E G P+ YN +++ L
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GVQPNLLIYNAVINALC 226
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A ++ + E P +T+++ G R +LD+ F++MA +GC P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I +G + +A DL MI G LP T I C G +++A + +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++GC PN Y L+S L +G L A + M G + + V+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T++ LI C G V A ++ I L P ++ + AL
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCD 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Y+ ++ M ++G P++ TY ++ G L L M R G P+ T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+++L + + A +LN M G P+++ + ++ G G+ + M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G ++V Y +I Y +G A + D M G P+ ++Y +I GFC K +
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM G PN + Y L+ KL A ++ HM G
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%)
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
++ L+ + + G + ++ L+ LSR G A + M ++G P+++ Y +I +
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G + A+ + + P+ FTY SMI G C D A + +M GC PN
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y+TL++ L ++G++ EA ++IR M+ G
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 31/315 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+ +I C G LA ++ + I+ P +Y++++ AL
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---PNLLTYSSLIRALGQ 647
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E ++ ++ G PD +TY ++ A GK++ L M ++G P T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707
Query: 118 YNILLHVLGK----GDKPLAAL----------------NLLNHM--KEVGFDP--SVLHF 153
Y +L+ L D+ LAAL + ++ M K DP SV
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L+ LS AG M ++G PD Y ++ S + ++ A +F M T
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G ++ Y +I C + EA + M R NP+ +V L+ L G
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887
Query: 274 AHEVIRHMVEKGKYI 288
E + H++E +Y+
Sbjct: 888 CMEFL-HIMETRRYM 901
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 107/294 (36%), Gaps = 27/294 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T++ LI G+ G + F + + P + +Y ++ A + +
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV--------MCAKYRLGKLDQF-------HRLLDE 105
+ +M G P + TY ++ + A RL L ++ D+
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 745
Query: 106 MGRSGFSPDF---------HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
S S N L+ L + A LL M G P + +L
Sbjct: 746 DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ L R N+D F M+ +GC + Y +I + ++A+ F+ M+ +
Sbjct: 806 LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 865
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
P+ +I G G D + ME+R P+F +Y L R A K
Sbjct: 866 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA---REASK 916
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N +I C G A ++++ +P + SY ++
Sbjct: 621 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCK 677
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++ +M D+G P+ +TY ++ + KLD LL+ M RSG P+ T
Sbjct: 678 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+H L K + A L M E G P+V+ +T ++DGL + G+ F++M
Sbjct: 738 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 797
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC+P+++ Y+ +I + G++E+A++LF + G +P+ TY MI + M+GK +
Sbjct: 798 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 857
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
A + M GC P Y L+ L+N LA+
Sbjct: 858 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 893
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G TA T I ++G F+ K P +Y A++ L
Sbjct: 481 MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 540
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K+ ++ +MS +G P+ +TYN ++ ++ +L+ MGR+G + TYN
Sbjct: 541 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNE 600
Query: 121 LLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ +LG P A+ ++N+M + G +++ + T++ G +GN + D M
Sbjct: 601 MIKGYCILGD---PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 657
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC PD YT +I + ++E A LF+ M+ G PN TY ++I G+C K D
Sbjct: 658 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 717
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++++ M+ GC PN YN L+ L + A E+ + M+E+G + ++V+
Sbjct: 718 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 772
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G PD +Y ++C ++ K++ L +EM G P+ TY L+ K +K
Sbjct: 656 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 715
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A +LL HMK G P+V + L+ GL++ N + M +G P+VV YT
Sbjct: 716 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 775
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI G A ++F+ MI +G LPN+ TY+S+IR GK +EA + E+E G
Sbjct: 776 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 835
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y ++ +GK+ A + M++ G
Sbjct: 836 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 870
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ LI C G + +A + R + +F P +YNA+++ L+
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVF---PNTVTYNALINILVE 572
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ K V M G +I+TYN ++ LG + +++ M + G S + T
Sbjct: 573 NRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 632
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ +AL +L+ M++ G P +T L+ G + +++ F+EM
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P+ V YT +I Y +L+ A L + M G PNV TYN +I G F
Sbjct: 693 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + K M G PN + Y ++ L G + A E+ M+E+G +L++
Sbjct: 753 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLT 807
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+S G + Y+ ++ RLG +D++HR+L E G P+ YN +++ L
Sbjct: 341 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GVQPNLLIYNAVINALC 396
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A ++ + E P +T+++ G R +LD+ F++MA +GC P+ V
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I +G + +A DL MI G LP T I C G +++A + +M
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++GC PN Y L+S L +G L A + M G + + V+
Sbjct: 517 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 137/329 (41%), Gaps = 41/329 (12%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++ L+ +G+ V++R+ + +P YNA+++AL E + +++
Sbjct: 352 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 411
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +PD TY ++ R LD ++ ++M + G P+ TY+ L++ L +
Sbjct: 412 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 471
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L+ M G P+ T + L G + F +M NKGC P+V YT +
Sbjct: 472 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 531
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLP--------------------------------- 218
I+ +G L+ A LF M G P
Sbjct: 532 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGL 591
Query: 219 --NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
N+ TYN MI+G+C+ G +A +M M RG + N + YNT++ ++G A
Sbjct: 592 FTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALR 651
Query: 277 VIRHMVEKG------KYIHLVSKFKRYKR 299
++ M + G Y L+ F + +
Sbjct: 652 ILDLMRDGGCKPDEWSYTELICGFCKISK 680
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T++ LI C G V A ++ I L P ++ + AL
Sbjct: 446 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCD 502
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Y+ ++ M ++G P++ TY ++ G L L M R G P+ T
Sbjct: 503 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 562
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+++L + + A +LN M G +++ + ++ G G+ + M
Sbjct: 563 YNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNML 622
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G ++V Y +I Y +G A + D M G P+ ++Y +I GFC K +
Sbjct: 623 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 682
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM G PN + Y L+ KL A ++ HM G
Sbjct: 683 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 730
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%)
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
++ L+ + + G + ++ L+ LSR G A + M ++G P+++ Y +I +
Sbjct: 335 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 394
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G + A+ + + P+ FTY SMI G C D A + +M GC PN
Sbjct: 395 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 454
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y+TL++ L ++G++ EA ++IR M+ G
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHG 485
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 31/315 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+ +I C G LA ++ + I+ P +Y++++ AL
Sbjct: 761 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---PNLLTYSSLIRALGQ 817
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E ++ ++ G PD +TY ++ A GK++ L M ++G P T
Sbjct: 818 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 877
Query: 118 YNILLHVLGK----GDKPLAAL----------------NLLNHM--KEVGFDP--SVLHF 153
Y +L+ L D+ LAAL + ++ M K DP SV
Sbjct: 878 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 937
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L+ LS AG M ++G PD Y ++ S + ++ A +F M T
Sbjct: 938 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G ++ Y +I C + EA + M R NP+ +V L+ L G
Sbjct: 998 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 1057
Query: 274 AHEVIRHMVEKGKYI 288
E + H++E +Y+
Sbjct: 1058 CMEFL-HIMETRRYM 1071
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 107/294 (36%), Gaps = 27/294 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T++ LI G+ G + F + + P + +Y ++ A + +
Sbjct: 796 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 855
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV--------MCAKYRLGKLDQF-------HRLLDE 105
+ +M G P + TY ++ + A RL L ++ D+
Sbjct: 856 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 915
Query: 106 MGRSGFSPDF---------HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
S S N L+ L + A LL M G P + +L
Sbjct: 916 DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 975
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ L R N+D F M+ +GC + Y +I + ++A+ F+ M+ +
Sbjct: 976 LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 1035
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
P+ +I G G D + ME+R P+F +Y L R A K
Sbjct: 1036 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA---REASK 1086
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N +I C G A ++++ +P + SY ++
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCK 507
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++ +M D+G P+ +TY ++ + KLD LL+ M RSG P+ T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+H L K + A L M E G P+V+ +T ++DGL + G+ F++M
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC+P+++ Y+ +I + G++E+A++LF + G +P+ TY MI + M+GK +
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
A + M GC P Y L+ L+N LA+
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G TA T I ++G F+ K P +Y A++ L
Sbjct: 311 MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGL 370
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K+ ++ +MS +G P+ +TYN ++ ++ +L+ MGR+G SP+ TYN
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 121 LLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ +LG P A+ ++N+M + G +++ + T++ G +GN + D M
Sbjct: 431 MIKGYCILGD---PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC PD YT +I + ++E A LF+ M+ G PN TY ++I G+C K D
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++++ M+ GC PN YN L+ L + A E+ + M+E+G + ++V+
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 124/283 (43%), Gaps = 7/283 (2%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFN---FRPFKNSYNAILHALLGIRQYK 62
FP T T+N LI E R++ F+ L P +YN ++ + K
Sbjct: 387 FPNTV-TYNALINILVE---NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
V M G++ +++TYN ++ G R+LD M G PD +Y L+
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K +A L N M + G P+ + +T L+DG + LD + M GC
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+V Y V+I A++L MI +G PNV TY +MI G C G A M
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M +GC PN L Y++L+ L GK+ EA + + G
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G PD +Y ++C ++ K++ L +EM G P+ TY L+ K +K
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A +LL HMK G P+V + L+ GL++ N + M +G P+VV YT
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI G A ++F+ MI +G LPN+ TY+S+IR GK +EA + E+E G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y ++ +GK+ A + M++ G
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++ L+ +G+ V++R+ + +P YNA+++AL E + +++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +PD TY ++ R LD ++ ++M + G P+ TY+ L++ L +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L+ M G P+ T + L G + F +M NKGC P+V YT +
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I+ +G L+ A LF M G PN TYN++I + A ++ M GC
Sbjct: 362 ISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+PN + YN ++ G +A V+ +M+++G +LV+
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+S G + Y+ ++ RLG +D++HR+L E G P+ YN +++ L
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GVQPNLLIYNAVINALC 226
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A ++ + E P +T+++ G R +LD+ F++MA +GC P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I +G + +A DL MI G LP T I C G +++A + +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++GC PN Y L+S L +G L A + M G + + V+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T++ LI C G V A ++ I L P ++ + AL
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCD 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Y+ ++ M ++G P++ TY ++ G L L M R G P+ T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+++L + + A +LN M G P+++ + ++ G G+ + M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G ++V Y +I Y +G A + D M G P+ ++Y +I GFC K +
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM G PN + Y L+ KL A ++ HM G
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%)
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
++ L+ + + G + ++ L+ LSR G A + M ++G P+++ Y +I +
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G + A+ + + P+ FTY SMI G C D A + +M GC PN
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y+TL++ L ++G++ EA ++IR M+ G
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 31/315 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+ +I C G LA ++ + I+ P +Y++++ AL
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---PNLLTYSSLIRALGQ 647
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E ++ ++ G PD +TY ++ A GK++ L M ++G P T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707
Query: 118 YNILLHVLGK----GDKPLAAL----------------NLLNHM--KEVGFDP--SVLHF 153
Y +L+ L D+ LAAL + ++ M K DP SV
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L+ LS AG M ++G PD Y ++ S + ++ A +F M T
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G ++ Y +I C + EA + M R NP+ +V L+ L G
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887
Query: 274 AHEVIRHMVEKGKYI 288
E + H++E +Y+
Sbjct: 888 CMEFL-HIMETRRYM 901
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 107/294 (36%), Gaps = 27/294 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T++ LI G+ G + F + + P + +Y ++ A + +
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV--------MCAKYRLGKLDQF-------HRLLDE 105
+ +M G P + TY ++ + A RL L ++ D+
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 745
Query: 106 MGRSGFSPDF---------HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
S S N L+ L + A LL M G P + +L
Sbjct: 746 DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ L R N+D F M+ +GC + Y +I + ++A+ F+ M+ +
Sbjct: 806 LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 865
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
P+ +I G G D + ME+R P+F +Y L R A K
Sbjct: 866 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA---REASK 916
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 149/334 (44%), Gaps = 63/334 (18%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+ C G++G ++++ + + P + +N+++HA R Y ++
Sbjct: 309 TYRILLSGCLGKGQLGRCKRILSMMMTEGCY---PNREMFNSLVHAYCKSRDYSYAYKLF 365
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYRL-------------------------------- 93
++M G P L YNI + C+ L
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425
Query: 94 ------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
GK D+ ++ EM GF PD TY+ ++ L K A L MK+ G
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV 485
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
PSV +T L+D +AG + + +FDEM C P+VV YT +I +Y+ A ++ A L
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT----MMKEMESRGCN----------- 252
F+ M+ +G PNV TY ++I G C AG+ D+AC M ++ES +
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE 605
Query: 253 -PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + Y LV L A ++ EAHE++ M G
Sbjct: 606 TPNIITYGALVDGLCKANRVEEAHELLDTMSVNG 639
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 142/304 (46%), Gaps = 22/304 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +NG + T+ ILI C G + AR + ++ N P +Y +++HA L
Sbjct: 479 MKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD---NCTPNVVTYTSLIHAYLK 535
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----FHRLLDEMGRSGF-- 111
R+ +++ M EG P+++TY ++ + G++D+ + R+ ++ S
Sbjct: 536 ARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDM 595
Query: 112 ----------SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+P+ TY L+ L K ++ A LL+ M G +P+ + + L+DG
Sbjct: 596 YFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFC 655
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G L+ + F +M+ +G P++ Y+ +I S L+ + M+ PNV
Sbjct: 656 KTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVV 715
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y MI G C GK +EA +M +ME GC PN + Y ++ GK+ + E+ R M
Sbjct: 716 IYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDM 775
Query: 282 VEKG 285
KG
Sbjct: 776 CSKG 779
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 102/201 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y A++ L + + + MS G P+ + Y+ ++ + GKL+ + +M
Sbjct: 611 TYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKM 670
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ P+ +TY+ L++ L K + L +L+ M E P+V+ +T ++DGL + G
Sbjct: 671 SERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKT 730
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ +M GC P+V+ YT MI + G++E+ +L+ M +KG PN TY +
Sbjct: 731 EEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVL 790
Query: 227 IRGFCMAGKFDEACTMMKEME 247
I C G DEA ++ EM+
Sbjct: 791 INHCCSTGLLDEAHRLLDEMK 811
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 10/237 (4%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY TYN ++ R KLD + EM SGF D T + L K
Sbjct: 195 RLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAG 254
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AL+LL + F P + + ++ GL A D M + C+P+VV Y
Sbjct: 255 RCGDALSLLEKEE---FVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYR 311
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++++ + G+L + + + M+T+G PN +NS++ +C + + A + K+M
Sbjct: 312 ILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKC 371
Query: 250 GCNPNFLVYNTLVSN------LRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
GC P +L+YN + + L + L A + M++ G ++ V+ + RC
Sbjct: 372 GCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVN-VSNFARC 427
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 127/316 (40%), Gaps = 44/316 (13%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
+ N LI C G+ +E + K F ++ +YNA++ L + V+++
Sbjct: 171 KLLNFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHRE 230
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
MS+ G+ D T C Y L K + L + + F PD YN ++ L +
Sbjct: 231 MSNSGFRMDGCTLG---CFAYSLCKAGRCGDALSLLEKEEFVPDTVFYNRMVSGLCEASL 287
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+++L+ M+ + P+V+ + L+ G G L CK M +GC P+ +
Sbjct: 288 FQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNS 347
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI----------------------- 227
++ +Y + + A LF MI G P YN I
Sbjct: 348 LVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYS 407
Query: 228 ------------------RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
R C AGKFD+A ++ EM S+G P+ Y+ ++ L +A
Sbjct: 408 EMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDAS 467
Query: 270 KLAEAHEVIRHMVEKG 285
K+ +A + M + G
Sbjct: 468 KVEKAFLLFEEMKKNG 483
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 131/287 (45%), Gaps = 8/287 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N ++ E L ++ ++ + + + P +Y +L LG Q + + M
Sbjct: 275 YNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMM 334
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
EG P+ +N ++ A + ++L +M + G P + YNI + + ++ L
Sbjct: 335 TEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEE-L 393
Query: 133 AALNLL-------NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+LL + M ++G + ++ + L AG D EM +KG +PD
Sbjct: 394 PGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDD 453
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y+ +I A ++EKA LF+ M G +P+V+TY +I FC AG +A E
Sbjct: 454 STYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDE 513
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M C PN + Y +L+ A K+ +A+++ M+ +G ++V+
Sbjct: 514 MLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVT 560
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 123/264 (46%), Gaps = 6/264 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+EN + +I +VG + +K + P +Y A++ I +
Sbjct: 705 MLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGK 764
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +Y+ M +G AP+ +TY +++ G LD+ HRLLDEM ++ + +Y
Sbjct: 765 IEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRK 824
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ G + + ++ LL+ + E P + L+D +AG L+ +E+++
Sbjct: 825 IIE--GFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSP 882
Query: 181 CMP--DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ + YT +I S A +++KA +L+ MI K +P + T+ +I+G GK+ E
Sbjct: 883 SLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQE 942
Query: 239 ACTMMKEMESRGCN--PNFLVYNT 260
A + + C+ NF+ Y T
Sbjct: 943 ALQLSDSICQMVCHVCSNFVNYKT 966
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 133/333 (39%), Gaps = 37/333 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG ++ LI + G E F+K + P +Y++++++L ++
Sbjct: 635 MSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKR 694
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L+ V +M + P+++ Y ++ ++GK ++ +RL+ +M G P+ TY
Sbjct: 695 LDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTA 754
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM---- 176
++ GK K L L M G P+ + + L++ G LD DEM
Sbjct: 755 MIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTY 814
Query: 177 -----------------------------ANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
+ +P Y ++I ++I AG LE A +L
Sbjct: 815 WPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNL 874
Query: 208 FDGMITKGQL--PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ + + L N + Y S+I A K D+A + M ++ P + L+ L
Sbjct: 875 LEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGL 934
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYK 298
GK EA ++ + + H+ S F YK
Sbjct: 935 TRVGKWQEALQLSDSICQ--MVCHVCSNFVNYK 965
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 135/297 (45%), Gaps = 38/297 (12%)
Query: 12 TFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNS-YNAILHALLGIRQYKLIEWVYQ 69
TF IL+ C C + G+ K E F + F P + + A++ LL ++ K V+
Sbjct: 191 TFLILVDCLC-KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFG 249
Query: 70 QMSDEGYAPDILTYNIV-------------------MCAKY----------------RLG 94
QM G+ PD + YN + M AK + G
Sbjct: 250 QMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAG 309
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
L++ L M SGF P+ Y L+H K + A +L + M E G+ P V+ T
Sbjct: 310 TLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHT 369
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++DGL ++GN + F+EM GC P+VV YT +I G + A + GMI
Sbjct: 370 VMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAH 429
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G P+ TY ++ GFC G+ DEA ++ E++ +PN +Y++LV L + G +
Sbjct: 430 GCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSV 486
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 147/295 (49%), Gaps = 10/295 (3%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN P + + +C G + A ++ +R + +P +YN +++ L R+ +
Sbjct: 502 ENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE---GCKPDATTYNILINGLCRSRENR 558
Query: 63 LIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+E + + D GY PD +TY + ++G++D+ ++L+E G++ D Y
Sbjct: 559 -VERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMAN 178
L L + A++L M G P + +++GL + L DACK FFDEM
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACK-FFDEMIG 676
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFD 237
KG P V YT ++ + AG +++A F+GM+ +G+L +V Y+++I GFC A K D
Sbjct: 677 KGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVD 736
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + ++M SRG P + +L L +GK +A E+++ M G H +
Sbjct: 737 AALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAAT 791
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 144/306 (47%), Gaps = 7/306 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +FNILI + A V F K +P +++ ++ L
Sbjct: 145 MLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGM 204
Query: 61 YKLIEWVYQQMSDEGYAP-DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ V+ +M G+ P D + ++ + ++ + + +M + GF PD YN
Sbjct: 205 DEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYN 264
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K AL +L++M P+ + + L++ L +AG L+ + F MA
Sbjct: 265 TMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAAS 324
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ V YT +I + +G +++A LFD M+ G P+V T+ MI G C +G F++A
Sbjct: 325 GFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQA 384
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSK 293
+EM GC PN + Y T++ L G++A A +++ M+ G YI L+
Sbjct: 385 AKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444
Query: 294 FKRYKR 299
F + R
Sbjct: 445 FCKLGR 450
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 119/266 (44%), Gaps = 1/266 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ T T+ IL+ + + G + E F FRP Y +++H +
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K ++ +M + GY PD++T+ +++ + G +Q + +EM R G P+ TY
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTT 405
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + A ++ M G P + + L+DG + G LD DE+
Sbjct: 406 IIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCS 465
Query: 181 CMPDVVCYTVMITSYIAAGELEKA-QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P++ Y+ ++ G +E DLF+ + + S+I G C G+ DEA
Sbjct: 466 SSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEA 525
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNL 265
C + + M S GC P+ YN L++ L
Sbjct: 526 CRIFQRMVSEGCKPDATTYNILINGL 551
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 131/282 (46%), Gaps = 16/282 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKS-------KLFNFRPFKNSYNAILH 53
M+ G A T+NILI GL R R ++ ++ + P +Y +
Sbjct: 532 MVSEGCKPDATTYNILI-----NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCI 586
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L I + + ++ S G+ D++ Y + G++D+ L EM R G +P
Sbjct: 587 GLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAP 646
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D Y +++ L KG K A + M G P+V +T L+ L AGN+D + F
Sbjct: 647 DAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRF 706
Query: 174 DEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+ M +G + V+ Y +I + A +++ A LF+ MI++G +P T S+ G
Sbjct: 707 EGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVR 766
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR---NAGKL 271
+GK ++A +++EM + G P+ + ++ LR +GKL
Sbjct: 767 SGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 112/241 (46%), Gaps = 10/241 (4%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
W +Q G+ D+ TYN +M Q + + +EM ++G +P+ ++NIL+
Sbjct: 108 WAGEQA---GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSF 164
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-PD 184
+ + A+ MK P + F L+D L +AG + F EM G + PD
Sbjct: 165 ARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPD 224
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+T M+ + + A +++A+++F M G P+ YN+MI G AG EA ++
Sbjct: 225 RALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLD 284
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYK 298
M ++ C P + Y LV++L AG L A E+ R M G Y L+ F +
Sbjct: 285 NMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSG 344
Query: 299 R 299
R
Sbjct: 345 R 345
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
H ++ L G A +F G DV Y ++ +A + + + M
Sbjct: 88 HVAAVLRSLKVTGT--AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEM 145
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G PN F++N +IR F + D+A T + M+ + C P+ + LV L AG
Sbjct: 146 LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMD 205
Query: 272 AEAHEVIRHMVEKG 285
+A EV M+ G
Sbjct: 206 EKAFEVFHEMMAMG 219
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N +I C G A ++++ +P + SY ++
Sbjct: 451 MLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG---GCKPDEWSYTELICGFCK 507
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + ++ +M D+G P+ +TY ++ + KLD LL+ M RSG P+ T
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+H L K + A L M E G P+V+ +T ++DGL + G+ F++M
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC+P+++ Y+ +I + G++E+A++LF + G +P+ TY MI + M+GK +
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
A + M GC P Y L+ L+N LA+
Sbjct: 688 HAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD 723
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G TA T I ++G F+ K P +Y A++ L
Sbjct: 311 MILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGI 370
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K+ ++ +MS +G P+ +TYN ++ ++ +L+ MGR+G SP+ TYN
Sbjct: 371 LKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNE 430
Query: 121 LLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ +LG P A+ ++N+M + G +++ + T++ G +GN + D M
Sbjct: 431 MIKGYCILGD---PKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC PD YT +I + ++E A LF+ M+ G PN TY ++I G+C K D
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++++ M+ GC PN YN L+ L + A E+ + M+E+G + ++V+
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 124/283 (43%), Gaps = 7/283 (2%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFN---FRPFKNSYNAILHALLGIRQYK 62
FP T T+N LI E R++ F+ L P +YN ++ + K
Sbjct: 387 FPNTV-TYNALINILVE---NRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPK 442
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
V M G++ +++TYN ++ G R+LD M G PD +Y L+
Sbjct: 443 KAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELI 502
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K +A L N M + G P+ + +T L+DG + LD + M GC
Sbjct: 503 CGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCR 562
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+V Y V+I A++L MI +G PNV TY +MI G C G A M
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEM 622
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M +GC PN L Y++L+ L GK+ EA + + G
Sbjct: 623 FNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G PD +Y ++C ++ K++ L +EM G P+ TY L+ K +K
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEK 545
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A +LL HMK G P+V + L+ GL++ N + M +G P+VV YT
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTA 605
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI G A ++F+ MI +G LPN+ TY+S+IR GK +EA + E+E G
Sbjct: 606 MIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHG 665
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y ++ +GK+ A + M++ G
Sbjct: 666 LIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAG 700
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++ L+ +G+ V++R+ + +P YNA+++AL E + +++
Sbjct: 182 AYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV 241
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +PD TY ++ R LD ++ ++M + G P+ TY+ L++ L +
Sbjct: 242 FESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRV 301
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L+ M G P+ T + L G + F +M NKGC P+V YT +
Sbjct: 302 NEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL 361
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I+ +G L+ A LF M G PN TYN++I + A ++ M GC
Sbjct: 362 ISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGC 421
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+PN + YN ++ G +A V+ +M+++G +LV+
Sbjct: 422 SPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVT 462
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 8/226 (3%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+S G + Y+ ++ RLG +D++HR+L E G P+ YN +++ L
Sbjct: 171 LSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GVQPNLLIYNAVINALC 226
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A ++ + E P +T+++ G R +LD+ F++MA +GC P+ V
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I +G + +A DL MI G LP T I C G +++A + +M
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++GC PN Y L+S L +G L A + M G + + V+
Sbjct: 347 KNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T++ LI C G V A ++ I L P ++ + AL
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCD 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Y+ ++ M ++G P++ TY ++ G L L M R G P+ T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+++L + + A +LN M G P+++ + ++ G G+ + M
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G ++V Y +I Y +G A + D M G P+ ++Y +I GFC K +
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKME 512
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM G PN + Y L+ KL A ++ HM G
Sbjct: 513 SAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSG 560
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 77/151 (50%)
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
++ L+ + + G + ++ L+ LSR G A + M ++G P+++ Y +I +
Sbjct: 165 MSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINA 224
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G + A+ + + P+ FTY SMI G C D A + +M GC PN
Sbjct: 225 LCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPN 284
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y+TL++ L ++G++ EA ++IR M+ G
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHG 315
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 31/315 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+ +I C G LA ++ + I+ P +Y++++ AL
Sbjct: 591 MIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCL---PNLLTYSSLIRALGQ 647
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E ++ ++ G PD +TY ++ A GK++ L M ++G P T
Sbjct: 648 EGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWT 707
Query: 118 YNILLHVLGK----GDKPLAAL----------------NLLNHM--KEVGFDP--SVLHF 153
Y +L+ L D+ LAAL + ++ M K DP SV
Sbjct: 708 YGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQ 767
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L+ LS AG M ++G PD Y ++ S + ++ A +F M T
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G ++ Y +I C + EA + M R NP+ +V L+ L G
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887
Query: 274 AHEVIRHMVEKGKYI 288
E + H++E +Y+
Sbjct: 888 CMEFL-HIMETRRYM 901
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 107/294 (36%), Gaps = 27/294 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T++ LI G+ G + F + + P + +Y ++ A + +
Sbjct: 626 MIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGK 685
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV--------MCAKYRLGKLDQF-------HRLLDE 105
+ +M G P + TY ++ + A RL L ++ D+
Sbjct: 686 VEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQ 745
Query: 106 MGRSGFSPDF---------HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
S S N L+ L + A LL M G P + +L
Sbjct: 746 DAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSL 805
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ L R N+D F M+ +GC + Y +I + ++A+ F+ M+ +
Sbjct: 806 LCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTW 865
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
P+ +I G G D + ME+R P+F +Y L R A K
Sbjct: 866 NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILA---REASK 916
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 131 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 190
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 191 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVD 250
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 251 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 310
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 311 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLK 370
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 371 PDTGTYTMIINEF 383
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 119 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 175
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 176 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 235
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 236 FTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 295
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 296 MKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 355
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S P+ Y +++ G + + ++++ M G +V+
Sbjct: 356 DAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 410
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 99/232 (42%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+++LI C ++ A ++ + + L P ++ ++
Sbjct: 189 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLI---PNGVTFTTLIDGRCK 245
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y++M + PD++TYN ++ + G L Q H L+DEM G PD T
Sbjct: 246 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 305
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A M + + +T L+ GL + G + EM
Sbjct: 306 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 365
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ PD YT++I + G++ K L M G P+V TYN ++ G
Sbjct: 366 SVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 147/311 (47%), Gaps = 30/311 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G FN L+ C G+ A K+ R P +YN + ++ G
Sbjct: 332 MMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTC---GSPPGYVAYNIFIGSICG 388
Query: 58 IRQY------KLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+ L+E VY++M + + T N C +GK ++ ++L EM R G
Sbjct: 389 QEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCL-CGVGKFEKAFQILKEMMRKG 447
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
F PD TY ++ L + K + L MK G +P V +T L+D +AG ++ +
Sbjct: 448 FVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQAR 507
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+FDEM + GC P+VV YT ++ +Y+ + +L +A D+F M+ PN TY+++I G
Sbjct: 508 SWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGL 567
Query: 231 CMAGKFDEACTMMKEMESRGCN----------------PNFLVYNTLVSNLRNAGKLAEA 274
C AG+ +AC + +++ N PN + Y L+ L A K+++A
Sbjct: 568 CKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDA 627
Query: 275 HEVIRHMVEKG 285
HE++ M+ G
Sbjct: 628 HELLDAMLAAG 638
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 114/221 (51%), Gaps = 4/221 (1%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP+++TY ++ + K+ H LLD M +G P+ Y+ L+ K K A
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M + G+ PSV +T+L+D + + G LD EM N C P+VV YT MI
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLS 724
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
GE+EKA +L M KG PNV TY ++I G GK D + + K+M S+GC PN++
Sbjct: 725 KVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYV 784
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
Y L+++ AG L EAH ++ M K+ H + Y
Sbjct: 785 TYRVLINHCCAAGLLDEAHLLLDEM----KHTHWPKHLQGY 821
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 144/276 (52%), Gaps = 5/276 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C +V A ++++ + + P + Y+A++ I + + V+ +M+ GY
Sbjct: 618 LCKAQKVSDAHELLDAMLAA---GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGY 674
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P + TY ++ ++ G+LD ++L EM +P+ TY ++ L K + ALN
Sbjct: 675 LPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALN 734
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL+ M+E G P+V+ +T L+DGL + G DA F +M +KGC P+ V Y V+I
Sbjct: 735 LLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCC 794
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AAG L++A L D M ++ Y+ ++GF + KF + +++EMES P
Sbjct: 795 AAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMESHETVPIAP 852
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
VY L+ + AG+L A E+ + +VE +++ S
Sbjct: 853 VYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTS 888
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 136/301 (45%), Gaps = 16/301 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+ ILI + + GL + F + + P +Y A+LHA L +Q
Sbjct: 478 MKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQ 537
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSG--------- 110
++ +M D P+ +TY+ ++ + G++ + + +++ G SG
Sbjct: 538 LIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFE 597
Query: 111 ------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+P+ TY L+ L K K A LL+ M G +P+ + + L+DG + G
Sbjct: 598 GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIG 657
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D + F M G +P V YT +I G L+ A + M+ PNV TY
Sbjct: 658 KIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYT 717
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+MI G G+ ++A ++ ME +GC+PN + Y L+ L GK + ++ + M K
Sbjct: 718 AMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777
Query: 285 G 285
G
Sbjct: 778 G 778
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y +L L +Q+ + + M EG P+ +N ++ G ++L
Sbjct: 304 PNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKL 363
Query: 103 LDEMGRSGFSPDFHTYNILL-HVLGKGDKPLAAL-NLLNHMKEVGFDPSVLHFTTLMDGL 160
+ M G P + YNI + + G+ + P A L +L+ + E S +
Sbjct: 364 FNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANF 423
Query: 161 SR----AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
SR G + EM KG +PD YT +IT A ++EK+ LF M G
Sbjct: 424 SRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGV 483
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+V+TY +I FC AG ++A + EM S GC+PN + Y L+ + +L +AH+
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHD 543
Query: 277 VIRHMVEKGKYIHLVS 292
+ MV+ Y + V+
Sbjct: 544 IFHRMVDAACYPNAVT 559
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 138/316 (43%), Gaps = 42/316 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G ++ LI C G++ A++V R K + P ++Y +++ +
Sbjct: 634 MLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKC---GYLPSVHTYTSLIDRMFK 690
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L V +M ++ P+++TY ++ ++G++++ LL M G SP+ T
Sbjct: 691 DGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVT 750
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM- 176
Y L+ LGK K A+L L M G P+ + + L++ AG LD DEM
Sbjct: 751 YTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMK 810
Query: 177 -------------ANKG-------------------CMPDVVCYTVMITSYIAAGELEKA 204
A +G +P Y ++I S+ AG LE A
Sbjct: 811 HTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETA 870
Query: 205 QDLFDGMITKGQLPNVFT---YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+L ++ N+ + Y S+I+ C+A + +EA T+ EM +G P+ +V+ +L
Sbjct: 871 LELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSL 930
Query: 262 VSNLRNAGKLAEAHEV 277
V L K EA ++
Sbjct: 931 VKGLIEVNKWDEALQL 946
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P +TYN ++ G+++ R+ EM SGF D T L K
Sbjct: 194 RLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVG 253
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ ALN+L ++ F+ + T ++ GL A + F M C+P+VV Y
Sbjct: 254 RWADALNML---EKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYR 310
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ ++ + + + + M+T+G PN +NS++ G+C AG + A + M +
Sbjct: 311 TLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTC 370
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P ++ YN + ++ +L A + +VEK
Sbjct: 371 GSPPGYVAYNIFIGSICGQEELPNAE--LLDLVEK 403
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 9/281 (3%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
R N+L+ C GL + +E + K F +RP +YNA++ L Q ++ V ++
Sbjct: 170 RLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKE 229
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
MS G+ D T A L K+ ++ L+ + + F+ D ++ L +
Sbjct: 230 MSASGFCMDRSTIGYFAQA---LCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASL 286
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A++ L+ M+ P+V+ + TL+ G + CK + M +GC P+ +
Sbjct: 287 FNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNS 346
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC------MAGKFDEACTMMK 244
++ Y AG+ A LF+ M T G P YN I C A D + +
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + C N + L GK +A ++++ M+ KG
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKG 447
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 93/242 (38%), Gaps = 40/242 (16%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +I +VG K + + P +Y A++ L + +++QM
Sbjct: 715 TYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM 774
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ +G AP+ +TY +++ G LD+ H LLDEM + + Y+ V G K
Sbjct: 775 NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHC--AVQGFSKKF 832
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK--------------------- 170
+A+L LL M+ P + L+D S+AG L+
Sbjct: 833 IASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMY 892
Query: 171 -----------------YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ EM KG +PD++ + ++ I + ++A L G
Sbjct: 893 ASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCH 952
Query: 214 KG 215
+G
Sbjct: 953 EG 954
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 143/287 (49%), Gaps = 19/287 (6%)
Query: 27 RKVVERFIKSKLFN-------------FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E +K + F + P +N ++H + +L + V+ ++
Sbjct: 105 RKVLEHLMKLRYFRLVWGFYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITK 164
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
P ++++N +M RLG LD+ RL M +G PD +TY++L++ L K K
Sbjct: 165 WSLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDE 224
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +LN M + G P+ + FTTL+DG + G +D + +M ++G +PD++ Y +I
Sbjct: 225 ANEMLNEMLDNGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIY 284
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L +A+DL + MI KG P+ TY ++I G C G + + K M
Sbjct: 285 GLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRL 344
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLVSKF 294
+ + Y L+S L G+ +A +++R M+ + G Y ++++F
Sbjct: 345 DEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEF 391
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K ++ RP S+N +++ +
Sbjct: 127 ILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITK---WSLRPSVVSFNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D+ + +L+EM +G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K K A+ + M GF P ++ + TL+ GL R G+L + +EM
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMI 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE +L MI + + TY ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAG 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM + G P+ Y +++ G + A +++R M G +V+
Sbjct: 364 DAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 143/280 (51%), Gaps = 6/280 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNIL+ C GE+ AR V+ IK + +YN+++ ++Q +V+
Sbjct: 276 TFNILVDGLCKEGEMKKARNVLAVMIKQGV---DSNIVTYNSLMDGYFLVKQENKATFVF 332
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+ G PD+ +Y+I++ + +D+ L EM +P+ TYN L+ L K
Sbjct: 333 NTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKY 392
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A +L+N M G V+ +++L+D L + +D ++ ++G P++ Y
Sbjct: 393 GRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTY 452
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+ AQ ++ ++ KG +V YN M+ G C G FDEA +++ +ME
Sbjct: 453 TILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMED 512
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
GC P+ + Y TLV L K +A +++R M+ +G +
Sbjct: 513 NGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAV 552
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 115/243 (47%), Gaps = 6/243 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SY +++ L + + V +++ P+++ YN ++ + + + L EM
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEM 230
Query: 107 GRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
PD TY L++ ++G+ + A+ L N M P V F L+DGL +
Sbjct: 231 IVKRIFPDVVTYTTLIYGCLIVGRLKE---AVGLFNQMLLKNIKPDVYTFNILVDGLCKE 287
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + + M +G ++V Y ++ Y + KA +F+ M +G P+V +Y
Sbjct: 288 GEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSY 347
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ MI G C DEA + KEM S+ PN + YN+L+ L G++++A +++ M
Sbjct: 348 SIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHN 407
Query: 284 KGK 286
+G+
Sbjct: 408 RGQ 410
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 116/245 (47%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N IL +L+ + + +QM + PD+ T+NI++ LG L+ +L ++
Sbjct: 67 FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ GF PD T L+ L K AL+ + + GF + + TL++GL + G
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A ++ P+VV Y +I S + A DL MI K P+V TY ++I
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
G + G+ EA + +M + P+ +N LV L G++ +A V+ M+++G
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306
Query: 288 IHLVS 292
++V+
Sbjct: 307 SNIVT 311
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D +++ N + HM+ P + F ++ L + + F +M K PD+ +
Sbjct: 45 DDAVSSFNHILHMRN-PVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTF 102
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I + G L A + + G P+ T ++I+G C+ GK EA ++ +
Sbjct: 103 NILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIA 162
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+G + + + Y TL++ L G+ A +V+R +
Sbjct: 163 KGFHLDQVSYGTLINGLCKTGETRAALQVLRKI 195
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ G P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L M + G P+ + FTTL+DG + G + +
Sbjct: 206 VYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K++ + L +EM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VL 125
+Y+QM + +PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 126 GKGDKPLAALNLLNHMKE-VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+GD A +KE + D + +T L+ GL + G + EM + G P+
Sbjct: 323 KEGDLETAXXYRKRMIKENIRLDD--VAYTALISGLCQEGRSVDAEKMLREMLSVGLKPE 380
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ YT++I + G++ L M G +P+V T
Sbjct: 381 IGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 150/284 (52%), Gaps = 9/284 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V A++++ R + F+P SY +L L R++ ++ ++
Sbjct: 224 TYNVIINGMCREGRVDDAKEILNRLSS---YGFQPDIVSYTTVLKGLCAARRWDDVKVLF 280
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M D+ P+ +T+++++ R G +++ ++L +M + G +P+ NI+++ + K
Sbjct: 281 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 340
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + LN+M G +P + +TT++ GL RAG + K EM K C P+ V +
Sbjct: 341 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 400
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I G +E+A L + M G + TYN+++ GFC+ G+ D A + +
Sbjct: 401 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP- 459
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + Y TL++ L +A +L A E++ M++K ++ V+
Sbjct: 460 --CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVT 501
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 109/214 (50%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G P ++TY +++ A + + +LDEM G +P+ TYN++++ + + +
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A +LN + GF P ++ +TT++ GL A D K F EM +K C+P+ V + +
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ + G +E+A + M G PN N +I C G+ D+A + M G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
CNP+ + Y T++ L AG+ A E++ MV K
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 391
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 3/285 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN IC + GL + ++ + +YNA++H G
Sbjct: 388 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH---GFCV 444
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + ++ P+ +TY ++ +LD LL EM + + T+N+
Sbjct: 445 QGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNV 504
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A+ L+N M E G P+++ F TL+DG+++ N + + +KG
Sbjct: 505 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D + Y+ ++ E+A + + G P V YN ++ C + D+A
Sbjct: 565 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 624
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC PN Y L+ L + G L EA V+ + KG
Sbjct: 625 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 669
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 78/145 (53%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M + G PSV+ +T L++ + ++ DEM KGC P++V Y V+I G
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
++ A+++ + + + G P++ +Y ++++G C A ++D+ + EM + C PN + ++
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
LV G + A +V++ M + G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHG 322
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
QM + G P+++T+N ++ + ++ LL + G S D TY+ ++ VL + D
Sbjct: 524 QMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED 583
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ +L+ ++++G P V + ++ L + D FF M + GCMP+ Y
Sbjct: 584 RTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYI 643
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQL 217
++I G L++A+ + + KG L
Sbjct: 644 ILIEGLAHEGLLKEARYVLSELYAKGVL 671
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A E + M+ +G P+V TY ++ C + F EA ++ EM ++GC PN +
Sbjct: 164 ATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV 223
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN +++ + G++ +A E++ + G +VS
Sbjct: 224 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVS 259
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 164/341 (48%), Gaps = 49/341 (14%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+NILI C ++ LA ++ + +K + P + +++L+ ++
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMK---LGYEPSIVTLSSLLNGYCHGKRI 171
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM + GY PD +T+ ++ + K + L+D M + G P+ TY ++
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 122 LHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K GD LA NLLN M+ + +V+ ++T++D L + + D F EM NKG
Sbjct: 232 VNGLCKRGDIDLA-FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
P+V+ Y+ +I+ +++ G+L +A+
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L+D MI + P++FTY+S+I GFCM + DEA M + M S+ C PN + YNTL++
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 266 RNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKRC 300
A ++ E E+ R M ++G Y L+ F + + C
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ +++ C G++ LA ++ + +K+ Y+ ++ +L
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI---EANVVIYSTVIDSLCK 272
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ +M ++G P+++TY+ ++ + RLL +M +P+ T
Sbjct: 273 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ K K + A L + M + DP + +++L++G LD K+ F+ M
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C P+VV Y +I + A +++ +LF M +G + N TY ++I GF A D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G +PN + YNTL+ L GKL +A V ++
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 496
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 14/299 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TF LI V L ++V+R + L +Y +++
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV-------TYGVVVN 233
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + +M +++ Y+ V+ + + D L EM G P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+ L+ L ++ A LL+ M E +P+V+ F L+D + G L + +
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DEM + PD+ Y+ +I + L++A+ +F+ MI+K PNV TYN++I GFC A
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ DE + +EM RG N + Y TL+ A A V + MV G + ++++
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 124/244 (50%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +Y++++ L ++ + M + P+++T+N ++ A + GKL + +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L DEM + PD TY+ L++ D+ A ++ M P+V+ + TL++G
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A +D F EM+ +G + + V YT +I + A + + AQ +F M++ G PN+
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN+++ G C GK ++A + + ++ P YN ++ + AGK+ + ++ +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 282 VEKG 285
KG
Sbjct: 532 SLKG 535
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 127/245 (51%), Gaps = 2/245 (0%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RP + +N +L A+ ++++ L+ + ++M G + ++ TYNI++ R ++
Sbjct: 80 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 139
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL +M + G+ P T + LL+ G + A+ L++ M E+G+ P + FTTL+ G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L D M +GC P++V Y V++ G+++ A +L + M N
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAN 259
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V Y+++I C D+A + EME++G PN + Y++L+S L N + ++A ++
Sbjct: 260 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS 319
Query: 280 HMVEK 284
M+E+
Sbjct: 320 DMIER 324
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 135/283 (47%), Gaps = 9/283 (3%)
Query: 7 PTTARTFNILICTCG--EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P +++ C C A +++ I+ K+ P ++NA++ A +++ KL+
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKI---NPNVVTFNALIDAF--VKEGKLV 347
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +Y +M PDI TY+ ++ +LD+ + + M P+ TYN L+
Sbjct: 348 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ K + + L M + G + + +TTL+ G +A + D + F +M + G
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+++ Y ++ G+LEKA +F+ + P ++TYN MI G C AGK ++ +
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +G P+ ++YNT++S G EA + R M E G
Sbjct: 528 FCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 111/228 (48%), Gaps = 6/228 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P I +N ++ A ++ K D L ++M R G S + +TYNIL++ + + AL L
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M ++G++PS++ ++L++G + D+M G PD + +T +I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ +A L D M+ +G PN+ TY ++ G C G D A ++ +ME+ N ++
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
Y+T++ +L +A + M KG Y L+S Y+R
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TFN LI G++ A K+ + IK + P +Y+++++
Sbjct: 321 MIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 377
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + P+++TYN ++ + ++D+ L EM + G + T
Sbjct: 378 HDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVT 437
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+H + A + M G P+++ + TL+DGL + G L+ F+ +
Sbjct: 438 YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 497
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P + Y +MI AG++E DLF + KG P+V YN+MI GFC G +
Sbjct: 498 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKE 557
Query: 238 EACTMMKEMESRGCNPN 254
EA + ++M G P+
Sbjct: 558 EADALFRKMREDGPLPD 574
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 54/105 (51%)
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ + + + +L+ A LF GM+ LP++F +N ++ KFD ++ ++M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + N YN L++ +++ A ++ M++ G +V+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 157
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/120 (20%), Positives = 55/120 (45%)
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD F M +P + + ++++ + + L + M G N++TYN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I FC + A ++ +M G P+ + ++L++ + ++++A ++ MVE G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ G P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G + +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 71/156 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AL M + + +T L+ GL + G + EM + G P++
Sbjct: 323 KEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G +P+V T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Cucumis sativus]
Length = 844
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 141/316 (44%), Gaps = 35/316 (11%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG P T+N L+ CG+ G + V F + K F P K+++N ++ A
Sbjct: 472 NGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELD 531
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+Y +M G+ P TYN ++ A R G +L +M GF P+ +++++LH
Sbjct: 532 AAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLH 591
Query: 124 VLGKGDKP---------------------LAALNLLN--------------HMKEVGFDP 148
KG L L L N + + G+ P
Sbjct: 592 CYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKP 651
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ F +++ ++ + + D + G PD+V Y ++ Y GE KA+++
Sbjct: 652 DMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEIL 711
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
G+I G+ P++ +YN++I+GFC G EA +M EM +RG P YNT VS
Sbjct: 712 KGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNTFVSGYAGR 771
Query: 269 GKLAEAHEVIRHMVEK 284
G AE EVI +M++K
Sbjct: 772 GMFAEVDEVISYMIQK 787
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 140/304 (46%), Gaps = 14/304 (4%)
Query: 6 FPTTARTFNILICTC-----GEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
P + ++ CT G ++ + F + K P +YN +L + +G
Sbjct: 223 IPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMG- 281
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R + I + +M +EG D T + V+ A R G +++ E+ SG+ P TY
Sbjct: 282 RSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTY 341
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N LL V GK ALN+L M++ + + L+ RAG + D M
Sbjct: 342 NALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTR 401
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG MP+ V YT +I +Y AG+ KA LF+ M G +PNV TYNS++ + +E
Sbjct: 402 KGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEE 461
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM----VEKGK--YIHLVS 292
++ +M GC PN + +NTL++ + GK + V R M E GK + L+S
Sbjct: 462 MIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLIS 521
Query: 293 KFKR 296
+ R
Sbjct: 522 AYGR 525
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 131/309 (42%), Gaps = 35/309 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF TFN LI G G + + + F P +YNA+L+AL +K
Sbjct: 508 GFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAA 567
Query: 65 EWVYQQMSDEGYAPDILTYNIVM-----------------------------------CA 89
E V M ++G+ P+ ++++++ A
Sbjct: 568 ESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILA 627
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
++ + R +E+ ++G+ PD +N +L + K + A +L+ ++E G P
Sbjct: 628 NFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPD 687
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
++ + +LM+ +R G + + G PD+V Y +I + G +++A +
Sbjct: 688 LVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMS 747
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M T+G P +FTYN+ + G+ G F E ++ M + C PN L Y +V A
Sbjct: 748 EMTTRGICPCIFTYNTFVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKAR 807
Query: 270 KLAEAHEVI 278
K +A + I
Sbjct: 808 KYQDAMDFI 816
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 121/274 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T + +I CG GL + E F++ K + P +YNA+L Y + ++M
Sbjct: 305 TCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEM 364
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D D +TYN ++ A R G ++ ++D M R G P+ TY +++ G+ K
Sbjct: 365 EDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKE 424
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ AL L N MK+ G P+V + +++ L + + +M GC P+ + + +
Sbjct: 425 VKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTL 484
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ G+ + +F M G P T+N++I + G +A M EM G
Sbjct: 485 LAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGF 544
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P YN L++ L G A V+ M KG
Sbjct: 545 TPCATTYNALLNALARRGDWKAAESVLLDMRNKG 578
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 39/256 (15%)
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+Y + + ++ + Y+ D+ ++ A R GK Q + + M G SP TYN
Sbjct: 212 KYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYN 271
Query: 120 ILLHVLGK----GDKPLAALN-------------------------LLNHMKEV------ 144
++L V GK DK L L+ L+N KE
Sbjct: 272 VMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKS 331
Query: 145 -GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G++P + + L+ +AG EM + C D V Y ++ +Y+ AG E+
Sbjct: 332 SGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEE 391
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
+ D M KG +PN TY ++I + AGK +A + +M+ GC PN YN++++
Sbjct: 392 GATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILA 451
Query: 264 NLRNAGKLAEAHEVIR 279
L GK + + E+I+
Sbjct: 452 LL---GKKSRSEEMIK 464
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+G+ T+N L+ G+ G+ + + + + N +YN ++ A + Y+
Sbjct: 332 SGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEE 391
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V M+ +G P+ +TY V+ A R GK + +L ++M +SG P+ TYN +L
Sbjct: 392 GATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILA 451
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+LGK + + +L+ M+ G P+ + + TL+ G + F EM N G P
Sbjct: 452 LLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEP 511
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ +I++Y G A ++D M+ G P TYN+++ G + A +++
Sbjct: 512 GKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVL 571
Query: 244 KEMESRGCNPN 254
+M ++G PN
Sbjct: 572 LDMRNKGFKPN 582
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 86/208 (41%), Gaps = 36/208 (17%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +++ +LG+ K AL LL+ + + V TT++ SR G F
Sbjct: 196 DSKAVELMIRILGRESKYSIALKLLDKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMF 255
Query: 174 DEMANKGCMPDVVCYTVMITSY--------------------------------IAA--- 198
+ M + G P +V Y VM+ Y I+A
Sbjct: 256 ERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLLDEMRNEGLQFDEFTCSTVISACGR 315
Query: 199 -GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A++ F + + G P TYN++++ F AG + EA ++KEME C + +
Sbjct: 316 EGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVT 375
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN LV+ AG E VI M KG
Sbjct: 376 YNELVAAYVRAGFYEEGATVIDTMTRKG 403
>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
Length = 716
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 117/223 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M D G PD++TY V+ A R+GK+D ++M G +PD + Y+ L+
Sbjct: 420 IFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 479
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
L A L+ + G ++ F+++++ L + G + + FD N G PD V
Sbjct: 480 THGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAV 539
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++++ Y G++EKA +FD M++ G PNV Y +++ G+C G+ DE ++ +EM
Sbjct: 540 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREM 599
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+G P+ ++YN ++ L AG+ A M E G I+
Sbjct: 600 LQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAIN 642
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 144/290 (49%), Gaps = 6/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T++ ++ C +G A + + + + P +YN +++
Sbjct: 249 MVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL---PDNWTYNNLIYGYSS 305
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+K V+++M PD++T N++M + + GK+ + + D M G +PD +
Sbjct: 306 TGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 365
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I+L+ + +L + M G P + F+ L+ + G LD F+EM
Sbjct: 366 YKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR 425
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PDVV YT +I + G+++ A + F+ MI +G P+ + Y+ +I+GFC G
Sbjct: 426 DHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 485
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+A ++ E+ + G + + ++++++NL G++ +A + V G++
Sbjct: 486 KAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQH 535
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 129/267 (48%), Gaps = 7/267 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L +++V+R I L +Y++++HAL R E +QM ++G PD TYN
Sbjct: 245 LFKEMVQRGIPPDLV-------TYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYN 297
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ G+ + R+ EM R PD T N+L+ L K K A ++ + M
Sbjct: 298 NLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMK 357
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G +P V + +++G + G L FD M G PD+ ++V+I +Y G L+KA
Sbjct: 358 GQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKA 417
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+F+ M G P+V TY ++I C GK D+A +M +G P+ Y+ L+
Sbjct: 418 MIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG 477
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G L +A E+I ++ G + +V
Sbjct: 478 FCTHGSLLKAKELILEIMNNGMRLDIV 504
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 140/320 (43%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N LI G ++ V F + + + P + N ++ +L +
Sbjct: 284 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGK 343
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V+ M+ +G PD+ +Y I++ G L L D M G +PD +T+++
Sbjct: 344 IKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSV 403
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ A+ + N M++ G P V+ +TT++ L R G +D F++M ++G
Sbjct: 404 LIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQG 463
Query: 181 CMPDVVCYTVMITSYIAAGELEKA-----------------------------------Q 205
PD Y +I + G L KA Q
Sbjct: 464 VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQ 523
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++FD + GQ P+ Y+ ++ G+C+ GK ++A + M S G PN +VY TLV+
Sbjct: 524 NIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGY 583
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G++ E + R M++KG
Sbjct: 584 CKIGRIDEGLSLFREMLQKG 603
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 134/290 (46%), Gaps = 9/290 (3%)
Query: 4 NGF-PTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
NGF AR + C G V L + R ++ + P ++Y ++
Sbjct: 72 NGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPRVLS--PTSHTYAILMDCCTRAH 129
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-FHRLLDEMGRSGFSPDFHTY 118
+ +L + Q+ G DI+ N ++ + D+ LL G PD +Y
Sbjct: 130 RPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 189
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ILL L K A +LL M E G P V+ +TT++D + G+++ F EM
Sbjct: 190 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEM 249
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD+V Y+ ++ + A + KA+ M+ KG LP+ +TYN++I G+ G++
Sbjct: 250 VQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQW 309
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + KEM P+ + N L+ +L GK+ EA +V M KG+
Sbjct: 310 KEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQ 359
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TF++LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 389 MLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGK 448
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G APD Y+ ++ G L + L+ E+ +G D ++
Sbjct: 449 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSS 508
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P + ++ LMDG G ++ FD M + G
Sbjct: 509 IINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 568
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y G +++ LF M+ KG P+ YN +I G +AG+ A
Sbjct: 569 IEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAK 628
Query: 241 TMMKEMESRGCNPNFLVYNTLV 262
EM G N YN ++
Sbjct: 629 VKFHEMTESGIAINKCTYNIVL 650
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 113/256 (44%), Gaps = 6/256 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G ++ LI CT G + A++++ + + + F +++I++ L
Sbjct: 459 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVF---FSSIINNLCK 515
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ + G PD + Y+++M +GK+++ R+ D M +G P+
Sbjct: 516 LGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 575
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ K + L+L M + G PS + + ++DGL AG K F EM
Sbjct: 576 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMT 635
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + Y +++ + ++A LF + ++ T N+MI G + +
Sbjct: 636 ESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 695
Query: 238 EACTMMKEMESRGCNP 253
EA + + G P
Sbjct: 696 EAKDLFASISRSGLVP 711
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 122/225 (54%)
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
YK + +M D+G PDI+TYN+V+ + G++D L + G P+ +YNI
Sbjct: 8 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 67
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L L ++ A L+ M + G P+V+ F L+ L R G ++ +++ G
Sbjct: 68 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 127
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + Y ++ ++ +++KA D M+++G P++ +YN+++ C +G+ D A
Sbjct: 128 CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 187
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +++ +GC P + YNT++ L AGK EA E++ MV KG
Sbjct: 188 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKG 232
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 142/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N+++ + G +E + P SYN +L L +
Sbjct: 18 MRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 77
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +M +G P+++T+N+++ R G ++ +L+++ + G +P+ +YN
Sbjct: 78 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNP 137
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH K K A+ L+ M G P ++ + TL+ L R+G +D ++ +KG
Sbjct: 138 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 197
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I AG+ ++A +L + M++KG P++ TY+++ G C + ++A
Sbjct: 198 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 257
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ G PN ++YN ++ L + A ++ +M+ G
Sbjct: 258 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P TFN+LI C G V A +V+E+ K + P SYN +LHA
Sbjct: 88 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK---YGCTPNSLSYNPLLHAFCK 144
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ M G PDI++YN ++ A R G++D LL ++ G +P +
Sbjct: 145 QKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLIS 204
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF---- 172
YN ++ L K K AL LLN M G P ++ ++T+ GL R + DA + F
Sbjct: 205 YNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ 264
Query: 173 ------------------------------FDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F M GCMP+ YT++I G ++
Sbjct: 265 DMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIK 324
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIR 228
+A+DL D + ++G + IR
Sbjct: 325 EARDLLDELCSRGVVRKSLINKGAIR 350
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ LL+ M++ G P ++ + +++G+ + G +D F + + GC P+ V Y +++
Sbjct: 11 AMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLK 70
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
A E A++L M KG PNV T+N +I C G + A +++++ GC P
Sbjct: 71 GLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTP 130
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N L YN L+ K+ +A + MV +G Y +VS
Sbjct: 131 NSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 169
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 34/62 (54%)
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
C + +A ++ EM +GC P+ + YN +V+ + G++ +A E ++++ G +
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 291 VS 292
VS
Sbjct: 63 VS 64
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 157/320 (49%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T++ILI C ++ LA V+ + +K + P + +++L+ ++
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMK---LGYEPNIVTLSSLLNGYCHSKRI 167
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM GY P+ +T+N ++ + K + L+D M G PD TY ++
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVV 227
Query: 122 LHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K GD LA + LLN M++ +P VL +TT++DGL + ++D F EM KG
Sbjct: 228 VNGLCKRGDTDLAFI-LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
P+VV Y+ +I+ +++ G+L +A+
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L+D M+ + P++ TY+S+I GFCM + DEA M + M S+ C P+ + Y+TL+
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGF 406
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
A ++ E E+ R M ++G
Sbjct: 407 CKAKRVDEGMELFREMSQRG 426
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +++ C G+ LA ++ + + KL P Y I+ L
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKL---EPGVLIYTTIIDGLCK 268
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G P+++TY+ ++ G+ RLL +M +PD T
Sbjct: 269 NKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 328
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K K + A L + M + DPS++ +++L++G LD K F+ M
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PDVV Y+ +I + A +++ +LF M +G + N TY ++I+G AG D
Sbjct: 389 SKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCD 448
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + KEM S G PN + YNTL+ L GKL +A V ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ TFN LI + A +++R + +P +Y +++ L
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAK---GCQPDLVTYGVVVNGLCK 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
L + +M P +L Y ++ + +D L EM G P+ T
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L + A LL+ M E +P V F+ L+D + G L + +DEM
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P +V Y+ +I + L++A+ +F+ M++K P+V +Y+++I+GFC A + D
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E + +EM RG N + Y TL+ L AG A E+ + MV G
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 9/283 (3%)
Query: 7 PTTARTFNILICTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P +++ C C G A +++ I+ K+ P +++A++ A +++ KL+
Sbjct: 289 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI---NPDVFTFSALIDAF--VKEGKLV 343
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +Y +M P I+TY+ ++ +LD+ ++ + M PD +Y+ L+
Sbjct: 344 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLI 403
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + + L M + G + + +TTL+ GL +AG+ D + F EM + G
Sbjct: 404 KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+++ Y ++ G+LEKA +F+ + P ++TYN MI G C AGK ++ +
Sbjct: 464 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 523
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +G P+ + YNT++S G EA + + M E G
Sbjct: 524 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 122/245 (49%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
RP +Y++++ L ++ + M + PD+ T++ ++ A + GKL +
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L DEM + P TY+ L++ D+ A + M P V+ ++TL+ G
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGF 406
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+A +D F EM+ +G + + V YT +I AG+ + AQ++F M++ G PN+
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN+++ G C GK ++A + + ++ P YN ++ + AGK+ + ++ +
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 281 MVEKG 285
+ KG
Sbjct: 527 LSLKG 531
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + +K + P +Y+++++
Sbjct: 317 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI---DPSIVTYSSLINGFCM 373
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + PD+++Y+ ++ + ++D+ L EM + G + T
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + A + M G P+++ + TL+DGL + G L+ F+ +
Sbjct: 434 YTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P + Y +MI AG++E DLF + KG P+V YN+MI GFC G +
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 553
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + KEM+ G PN YNTL+ + LR+ + A A E+I+ M
Sbjct: 554 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA-ELIKEM 597
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 128/246 (52%), Gaps = 4/246 (1%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RPF + ++ +L A+ + ++ ++ + +QM + G + TY+I++ R +L
Sbjct: 76 RPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLA 135
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L +M + G+ P+ T + LL+ + A+ L++ M G+ P+ + F TL+ G
Sbjct: 136 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHG 195
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-P 218
L D M KGC PD+V Y V++ G+ + A L + M +G+L P
Sbjct: 196 LFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM-EQGKLEP 254
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
V Y ++I G C D+A + KEME++G PN + Y++L+S L N G+ ++A ++
Sbjct: 255 GVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLL 314
Query: 279 RHMVEK 284
M+E+
Sbjct: 315 SDMIER 320
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 131/277 (47%), Gaps = 7/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ + T++ LI C + A+++ E + F P SY+ ++
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF---PDVVSYSTLIKGFCK 408
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++++MS G + +TY ++ ++ G D + EM G P+ T
Sbjct: 409 AKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL L K K A+ + +++ +P++ + +++G+ +AG ++ F ++
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PDVV Y MI+ + G E+A LF M G LPN YN++IR G +
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDRE 588
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ ++KEM S G + LV+N+ + G+L ++
Sbjct: 589 ASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 624
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 57 GIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
G+ + KL + V + +M P I+ ++ ++ A ++ K D L ++M G +
Sbjct: 56 GLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHN 115
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY+IL++ + + AL +L M ++G++P+++ ++L++G + + D
Sbjct: 116 HYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M G P+ V + +I + +A L D M+ KG P++ TY ++ G C G
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRG 235
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYI 288
D A ++ +ME P L+Y T++ L + +A + + M KG Y
Sbjct: 236 DTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYS 295
Query: 289 HLVSKFKRYKR 299
L+S Y R
Sbjct: 296 SLISCLCNYGR 306
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T T+NI+I + G + F L +P +YN ++ + + ++
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M ++G P+ YN ++ A+ R G + L+ EM GF+ D T ++ ++L G
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Query: 129 DKPLAALNLLN 139
+ L++L+
Sbjct: 620 RLDKSFLDMLS 630
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 76/368 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E +P+ + FN L+ CT G+ A K++++ +K P YN ++ ++ G
Sbjct: 364 MMEGCYPS-PKIFNSLVHAYCTSGDHSYAYKLLKKMVKC---GHMPGYVVYNILIGSICG 419
Query: 58 IRQ------YKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+ L E Y +M G ++ ++ +C+ GK ++ ++ EM
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA---GKYEKAFSVIREMIG 476
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
GF PD TY+ +L+ L K A L MK G V +T ++D +AG ++
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ +F+EM GC P+VV YT +I +Y+ A ++ A +LF+ M+++G LPN+ TY+++I
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 229 GFCMAGKFDEACTMMKEM------------------------------------------ 246
G C AG+ ++AC + + M
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 247 ESR---------GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
E+R GC PN +VY+ L+ L GKL EA EV M E G Y L+
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 292 SKFKRYKR 299
++ + KR
Sbjct: 717 DRYFKVKR 724
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 16/301 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+ I++ + + GL + + F + + P +Y A++HA L ++
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH---- 116
+++ M EG P+I+TY+ ++ + G++++ ++ + M S PD
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 117 ------------TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
TY LL K + A LL+ M G +P+ + + L+DGL + G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
LD + EM+ G + Y+ +I Y + A + M+ PNV Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
MI G C GK DEA +M+ ME +GC PN + Y ++ GK+ E++ M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 285 G 285
G
Sbjct: 809 G 809
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLF-------------NFRPF 44
M+ G T++ LI C G+V A ++ ER SK + RP
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A+L + + + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM GF +TY+ L+ K + A +L+ M E P+V+ +T ++DGL + G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D M KGC P+VV YT MI + G++E +L + M +KG PN TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 225 SMIRGFCMAGKFDEACTMMKEME 247
+I C G D A +++EM+
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMK 841
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 13/289 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GFP T T++ LI +V LA KV+ + +++ + P Y ++ L
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN---SCAPNVVIYTEMIDGLCK 756
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + Q M ++G P+++TY ++ +GK++ LL+ MG G +P++ T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ K A NLL MK+ + + +++G ++ DE+
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 874
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT--KGQLPNVFTYNSMIRGFCMAGK 235
P + Y ++I + I A LE A L + + T + TYNS+I C+A K
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA---HEVIRHM 281
+ A + EM +G P + +L+ L K++EA + I HM
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHM 983
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 17/283 (6%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
N+L+ C G +A +E + K F FRP +++YN ++ A L + +++
Sbjct: 203 LNVLVRKHCRNGSFSIA---LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHR 259
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+MS D T + C Y L K+ ++ L + F PD Y L+ L +
Sbjct: 260 EMSLANLRMDGFT---LRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A++ LN M+ P+V+ ++TL+ G L CK + M +GC P +
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM------ 243
++ +Y +G+ A L M+ G +P YN +I C K C ++
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC-GDKDSLNCDLLDLAEKA 435
Query: 244 -KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + G N + ++ L +AGK +A VIR M+ +G
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN P T + LI E L + ++ + + + P +Y+ +L L +Q
Sbjct: 296 ENFVPDTV-FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V M EG P +N ++ A G ++LL +M + G P + YNIL+
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 123 HVLGKGDKPLAALNLLN-------HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ GDK +LL+ M G + ++ ++ L AG + E
Sbjct: 415 GSIC-GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +G +PD Y+ ++ A ++E A LF+ M G + +V+TY M+ FC AG
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++A EM GC PN + Y L+ A K++ A+E+ M+ +G ++V+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 42/305 (13%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C V ARK+++ + P + Y+A++ L + + + V +MS+ G+
Sbjct: 650 CKSHRVEEARKLLDAM---SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TY+ ++ +++ + D ++L +M + +P+ Y ++ L K K A L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M+E G P+V+ +T ++DG G ++ C + M +KG P+ V Y V+I
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G L+ A +L + M + Y +I GF +F E+ ++ E+ P V
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 258 Y-------------------------------------NTLVSNLRNAGKLAEAHEVIRH 280
Y N+L+ +L A K+ A ++
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 281 MVEKG 285
M +KG
Sbjct: 945 MTKKG 949
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L +K+ F PS + L+ +A LD+ EM+ D
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S G+ +A L + T+ +P+ Y +I G C A F+EA + M + C P
Sbjct: 279 SLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
N + Y+TL+ N +L V+ M+ +G Y
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 76/368 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E +P+ + FN L+ CT G+ A K++++ +K P YN ++ ++ G
Sbjct: 364 MMEGCYPS-PKIFNSLVHAYCTSGDHSYAYKLLKKMVKC---GHMPGYVVYNILIGSICG 419
Query: 58 IRQ------YKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+ L E Y +M G ++ ++ +C+ GK ++ ++ EM
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA---GKYEKAFSVIREMIG 476
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
GF PD TY+ +L+ L K A L MK G V +T ++D +AG ++
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ +F+EM GC P+VV YT +I +Y+ A ++ A +LF+ M+++G LPN+ TY+++I
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 229 GFCMAGKFDEACTMMKEM------------------------------------------ 246
G C AG+ ++AC + + M
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 247 ESR---------GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
E+R GC PN +VY+ L+ L GKL EA EV M E G Y L+
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 292 SKFKRYKR 299
++ + KR
Sbjct: 717 DRYFKVKR 724
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 16/301 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+ I++ + + GL + + F + + P +Y A++HA L ++
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH---- 116
+++ M EG P+I+TY+ ++ + G++++ ++ + M S PD
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 628
Query: 117 ------------TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
TY LL K + A LL+ M G +P+ + + L+DGL + G
Sbjct: 629 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 688
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
LD + EM+ G + Y+ +I Y + A + M+ PNV Y
Sbjct: 689 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 748
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
MI G C GK DEA +M+ ME +GC PN + Y ++ GK+ E++ M K
Sbjct: 749 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 285 G 285
G
Sbjct: 809 G 809
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLF-------------NFRPF 44
M+ G T++ LI C G+V A ++ ER SK + RP
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A+L + + + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM GF +TY+ L+ K + A +L+ M E P+V+ +T ++DGL + G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D M KGC P+VV YT MI + G++E +L + M +KG PN TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 225 SMIRGFCMAGKFDEACTMMKEME 247
+I C G D A +++EM+
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEMK 841
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 13/290 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GFP T T++ LI +V LA KV+ + +++ + P Y ++ L
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN---SCAPNVVIYTEMIDGLCK 756
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + Q M ++G P+++TY ++ +GK++ LL+ MG G +P++ T
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ K A NLL MK+ + + +++G ++ DE+
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 874
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT--KGQLPNVFTYNSMIRGFCMAGK 235
P + Y ++I + I A LE A L + + T + TYNS+I C+A K
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 934
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA---HEVIRHMV 282
+ A + EM +G P + +L+ L K++EA + I HMV
Sbjct: 935 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMV 984
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 17/283 (6%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
N+L+ C G +A +E + K F FRP +++YN ++ A L + +++
Sbjct: 203 LNVLVRKHCRNGSFSIA---LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHR 259
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+MS D T + C Y L K+ ++ L + F PD Y L+ L +
Sbjct: 260 EMSLANLRMDGFT---LRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 316
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A++ LN M+ P+V+ ++TL+ G L CK + M +GC P +
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM------ 243
++ +Y +G+ A L M+ G +P YN +I C K C ++
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSIC-GDKDSLNCDLLDLAEKA 435
Query: 244 -KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + G N + ++ L +AGK +A VIR M+ +G
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN P T + LI E L + ++ + + + P +Y+ +L L +Q
Sbjct: 296 ENFVPDTV-FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V M EG P +N ++ A G ++LL +M + G P + YNIL+
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 123 HVLGKGDKPLAALNLLN-------HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ GDK +LL+ M G + ++ ++ L AG + E
Sbjct: 415 GSIC-GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +G +PD Y+ ++ A ++E A LF+ M G + +V+TY M+ FC AG
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++A EM GC PN + Y L+ A K++ A+E+ M+ +G ++V+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 42/305 (13%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C V ARK+++ + P + Y+A++ L + + + V +MS+ G+
Sbjct: 650 CKSHRVEEARKLLDAM---SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TY+ ++ +++ + D ++L +M + +P+ Y ++ L K K A L
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M+E G P+V+ +T ++DG G ++ C + M +KG P+ V Y V+I
Sbjct: 767 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 826
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G L+ A +L + M + Y +I GF +F E+ ++ E+ P V
Sbjct: 827 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 258 Y-------------------------------------NTLVSNLRNAGKLAEAHEVIRH 280
Y N+L+ +L A K+ A ++
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 944
Query: 281 MVEKG 285
M +KG
Sbjct: 945 MTKKG 949
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L +K+ F PS + L+ +A LD+ EM+ D
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S G+ +A L + T+ +P+ Y +I G C A F+EA + M + C P
Sbjct: 279 SLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
N + Y+TL+ N +L V+ M+ +G Y
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 145/276 (52%), Gaps = 6/276 (2%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI C + A +V++R ++SK +F P +YN ++ +L + L V
Sbjct: 161 YNALINGFCKMNRIDDATRVLDR-MRSK--DFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
Q+ + P ++TY I++ A G +D+ +L+DEM G PD TYN ++ + K
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A ++ +++ G +P V+ + L+ L G + + +M ++ C P+VV Y+
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++IT+ G++E+A +L M KG P+ ++Y+ +I FC G+ D A ++ M S
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + YNT+++ L GK +A E+ + E G
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 6/228 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD+ YN ++ ++ ++D R+LD M FSPD TYNI++ L K AL +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
LN + P+V+ +T L++ G +D DEM ++G PD+ Y +I
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +++A ++ + KG P+V +YN ++R GK++E +M +M S C+PN +
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
Y+ L++ L GK+ EA +++ M EKG Y L++ F R R
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M F T+NI+I C+ G++ LA KV+ + + N +P +Y ++ A +
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD---NCQPTVITYTILIEATML 240
Query: 57 --GIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G+ + KL++ +M G PD+ TYN ++ + G +D+ ++ + G P
Sbjct: 241 EGGVDEALKLMD----EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEP 296
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YNILL L K L+ M DP+V+ ++ L+ L R G ++
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M KG PD Y +I ++ G L+ A + + MI+ G LP++ YN+++ C
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK D+A + ++ GC+PN YNT+ S L ++G A +I M+ G
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N +I + G+ + E +L P SYN +L ALL +
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGK 313
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +M E P+++TY+I++ R GK+++ LL M G +PD ++Y+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + A+ L M G P ++++ T++ L + G D F ++ G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ Y M ++ ++G+ +A + M++ G P+ TYNSMI C G DEA
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M S +P+ + YN ++ A ++ +A V+ MV G
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 34/224 (15%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPD----------FHT------------------------ 117
R G + LL+ M R G++PD F T
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K ++ A +L+ M+ F P + + ++ L G LD +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C P V+ YT++I + + G +++A L D M+++G P++FTYN++IRG C G D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A M++ +E +G P+ + YN L+ L N GK E +++ M
Sbjct: 281 RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL---IEWVY 68
T++ILI T G + + K P SY+ ++ A R+ +L IE++
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF--CREGRLDVAIEFLE 392
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+SD G PDI+ YN V+ + GK DQ + ++G G SP+ +YN + L
Sbjct: 393 TMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL+++ M G DP + + +++ L R G +D +M + P VV Y
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+++ + A +E A ++ + M+ G PN TY +I G AG EA + ++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ +L+LL M G++P V+ T L+ G N+ E+ K PDV Y +
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNAL 164
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + ++ A + D M +K P+ TYN MI C GK D A ++ ++ S C
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + Y L+ G + EA +++ M+ +G
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G A +++ LI C G + +A + +E I P +YN +L L
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL---PDIVNYNTVLATLCK 415
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDEMGRSGFSPDFH 116
+ ++ ++ + G +P+ +YN + A + G K+ H +L EM +G PD
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSNGIDPDEI 474
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN ++ L + A LL M+ F PSV+ + ++ G +A ++ + M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
GC P+ YTV+I AG +A +L + ++
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R+GN + + M KG PDV+ T +I + + KA + + + GQ P+VF
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVF 159
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
YN++I GFC + D+A ++ M S+ +P+ + YN ++ +L + GKL A +V+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 282 V 282
+
Sbjct: 220 L 220
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 143/294 (48%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I +GF TF+ + C G V A KV+ ++ P +Y+ +++ L
Sbjct: 293 IADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQE---GCEPDVYTYSTVINCLCNN 349
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + + QM D G PD T+N ++ A +L++ L E+ G SP+ +T+
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF 409
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P A+ L MK G P + + L+D L +G L EM
Sbjct: 410 NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV 469
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC V Y +I +E+A+++FD M G N T+N++I G C A + D+
Sbjct: 470 SGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDD 529
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ +M S G PN + YN+++++ G +++A ++++ M G + +V+
Sbjct: 530 AAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVT 583
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 149/288 (51%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T++ +I C GE+ A+ +V + + S P ++N ++ AL
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCL---PDTTTFNTLIVALCT 383
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + ++++ +G +P++ T+NI++ A ++G RL +EM SG +PD T
Sbjct: 384 ENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVT 443
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K AL+LL M+ G S + + T++DGL + ++ + FD+M
Sbjct: 444 YNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMD 503
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + + + +I A ++ A +L D MI++G PN TYNS++ +C G
Sbjct: 504 VTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNIS 563
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +++ M + G + + Y TL++ L A + A +++R M KG
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG 611
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 139/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G TFN +I AR V + + P + ++ ++ +
Sbjct: 187 MSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGS 246
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +MS+ G +P +T N+++ +LG++ + + GF PD T++
Sbjct: 247 IEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFST 306
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + AL +L M + G +P V ++T+++ L G L+ K ++M + G
Sbjct: 307 FVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PD + +I + +LE+A DL + KG PNV+T+N +I C G A
Sbjct: 367 CLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAV 426
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM+S GC P+ + YN L+ NL ++GKLA+A ++++ M G
Sbjct: 427 RLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 135/292 (46%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILICT-CGE------VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+++G TFN LI C E + LAR++ + + ++ F N +++
Sbjct: 362 MVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF-------NILIN 414
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
AL + L ++++M G PD +TYNI++ GKL + LL EM SG
Sbjct: 415 ALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQ 474
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN ++ L K + A + + M G + + F TL+DGL A +D
Sbjct: 475 STVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELV 534
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M ++G P+ V Y ++T Y G + KA D+ M G +V TY ++I G C A
Sbjct: 535 DQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKA 594
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A +++ M +G P YN ++ +L +A + R M E G
Sbjct: 595 RRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVG 646
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ V Q+ G + YN ++ K+ EM G PD T+N ++
Sbjct: 146 DLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDA 205
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + + A+ +L M P FTTLM+G G+++A M+ GC P
Sbjct: 206 LCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPT 265
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V V+I Y G + A I G P+ T+++ + G C G D A ++
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M GC P+ Y+T+++ L N G+L EA ++ MV+ G
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSG 366
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 123/291 (42%), Gaps = 4/291 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+NILI G K ++ + ++ +YN I+ L R+ + E V+ QM
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN-ILLHVLGKGDK 130
G + +T+N ++ ++D L+D+M G P+ TYN IL H +G+
Sbjct: 503 DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA ++L M GF+ V+ + TL++GL +A A M KG P Y
Sbjct: 563 SKAA-DILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNP 621
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM-AGKFDEACTMMKEMESR 249
+I S A LF M G P+ FTY + RG C G EA + EM
Sbjct: 622 VIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADN 681
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL-VSKFKRYKR 299
G P F + L L N G I +VEK + +S + Y R
Sbjct: 682 GFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVEKANFRESDISAIRGYLR 732
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 111/244 (45%), Gaps = 1/244 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-FHR 101
P ++ Y I+ L + L++ + +M EG+ + + + RL D F
Sbjct: 88 PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ +++ G + YN LL VL +G K + M G +P V+ F T++D L
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
RA +EM++ PD +T ++ ++ G +E A L M G P
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T N +I G+C G+ +A +++ + G P+ + ++T V+ L G + A +V+ M
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327
Query: 282 VEKG 285
+++G
Sbjct: 328 LQEG 331
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 138/281 (49%), Gaps = 9/281 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N ++ C G + AR+++ F P ++N ++ AL +
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGM------PFPPDTFTFNPLIRALCVRGRV 178
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V+ M G +P ++TY+I++ A + Q LLDEM G PD TYN+L
Sbjct: 179 PDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVL 238
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + ALN+L+ + G P + +T ++ L + + F EMA+ C
Sbjct: 239 INAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKC 298
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD V + ++TS G +++A + D M G +P++ TY+S++ G C G+ D+A
Sbjct: 299 APDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVE 358
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++ ++S GC P+ + Y T++ L + + A E++ MV
Sbjct: 359 LLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMV 399
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 140/274 (51%), Gaps = 6/274 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N+LI C G+V A ++ +P +Y +L +L G ++K +E ++
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPS---HGCKPDAVTYTPVLKSLCGSERWKEVEELF 290
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M+ APD +T+N ++ + + G +D+ +++D M G PD TY+ +L L
Sbjct: 291 AEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDV 350
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ LL+ +K G P + +TT++ GL + + EM C PD V +
Sbjct: 351 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTF 410
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I S G +++A + + M G P++ TYNS+I G C D+A ++ ++S
Sbjct: 411 NTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQS 470
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
GC P+ + +NTL+ L + + +A +++ +M+
Sbjct: 471 YGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 144/325 (44%), Gaps = 41/325 (12%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP TFN LI C G V A V + + P +Y+ +L A Y+
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHR---GCSPSVVTYSILLDATCKASGYR 214
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ +M +G PDI+TYN+++ A G +D+ +L ++ G PD TY +L
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274
Query: 123 HVLGKGDK---------PLA--------------------------ALNLLNHMKEVGFD 147
L ++ +A A+ +++HM E G
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P ++ +++++DGL G +D + + GC PD + YT ++ + + E A++L
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
M+ P+ T+N++I C G D A ++++M GCNP+ + YN+++ L N
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +A E++ ++ G +V+
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVT 479
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 12/283 (4%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P NILI C+ G V A +V S +YN +++ G +
Sbjct: 94 LPLPVVPCNILIKRLCSGGRVADAERVFATLGASATVV------TYNTMVN---GYCRAG 144
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
IE + +S + PD T+N ++ A G++ + D+M G SP TY+ILL
Sbjct: 145 RIEDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILL 204
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K A+ LL+ M+ G +P ++ + L++ + G++D ++ + GC
Sbjct: 205 DATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCK 264
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD V YT ++ S + ++ ++LF M + P+ T+N+++ C G D A +
Sbjct: 265 PDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKV 324
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M GC P+ + Y++++ L + G++ +A E++ + G
Sbjct: 325 VDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M N TFN ++ + + GL + ++ P +Y++IL L + +
Sbjct: 293 MASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ G PD + Y V+ + + + L+ EM S PD T+N
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + A+ ++ M E G +P ++ + +++DGL +D + + G
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+V + ++ + E A+ L M+ P+ T+N++I C G +A
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAI 532
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+K M GC PN YN +V L AGK EA +++ M
Sbjct: 533 ETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT 574
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 8/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ + P TFN +I C G V A KVVE+ ++ P +YN+I+ L
Sbjct: 398 MVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSEN---GCNPDIVTYNSIIDGLCN 454
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + + G PDI+T+N ++ + + + +L+ M S PD T
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATT 514
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ L + L A+ L M E G P+ + ++D L +AG M
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT 574
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N PD++ Y +I++ AG++E+A DL M++ G P+ TY S+ G C D
Sbjct: 575 NG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTD 632
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M+ ++ G +P+ YN ++ + A + HMV G
Sbjct: 633 RAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSG 680
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 2/217 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ + P A TFN +I + + GL + +E P +++YN ++ ALL +
Sbjct: 503 MMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGK 562
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M++ PD++TYN V+ + GK+++ LL M +G SPD TY
Sbjct: 563 TQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRS 620
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + + + D A+ +L ++++G P + ++ G + D F M + G
Sbjct: 621 LAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSG 680
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
CMPD Y +++ + L++A+ L + + G L
Sbjct: 681 CMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGVL 717
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 12/244 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV- 67
TFN L+ C+ A +++ + S + P ++N ++ +L ++ L++ +
Sbjct: 479 TFNTLLKGLCSVDRWEDAEQLMVNMMHS---DCPPDATTFNTVITSL--CQKGLLLQAIE 533
Query: 68 -YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ M++ G P+ TYNIV+ A + GK + +LL G + +PD TYN ++ +
Sbjct: 534 TLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS--GMTNGTPDLITYNTVISNIT 591
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K AL+LL M G P + + +L G+ R D + + G PD
Sbjct: 592 KAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDAT 651
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ + + A D F M++ G +P+ TY ++ DEA ++ +
Sbjct: 652 FYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711
Query: 247 ESRG 250
S G
Sbjct: 712 CSLG 715
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 166 LDACKYFFDEMANKG----CMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+D D +A+ G C+P VV ++I + G + A+ +F T G V
Sbjct: 74 IDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVF---ATLGASATV 130
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN+M+ G+C AG+ ++A ++ M P+ +N L+ L G++ +A V
Sbjct: 131 VTYNTMVNGYCRAGRIEDARRLISGMPF---PPDTFTFNPLIRALCVRGRVPDALAVFDD 187
Query: 281 MVEKGKYIHLVS 292
M+ +G +V+
Sbjct: 188 MLHRGCSPSVVT 199
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 167/368 (45%), Gaps = 76/368 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E +P+ + FN L+ CT G+ A K++++ +K P YN ++ ++ G
Sbjct: 323 MMEGCYPS-PKIFNSLVHAYCTSGDHSYAYKLLKKMVKC---GHMPGYVVYNILIGSICG 378
Query: 58 IRQ------YKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+ L E Y +M G ++ ++ +C+ GK ++ ++ EM
Sbjct: 379 DKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSA---GKYEKAFSVIREMIG 435
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
GF PD TY+ +L+ L K A L MK G V +T ++D +AG ++
Sbjct: 436 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 495
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ +F+EM GC P+VV YT +I +Y+ A ++ A +LF+ M+++G LPN+ TY+++I
Sbjct: 496 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 555
Query: 229 GFCMAGKFDEACTMMKEM------------------------------------------ 246
G C AG+ ++AC + + M
Sbjct: 556 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 615
Query: 247 ESR---------GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
E+R GC PN +VY+ L+ L GKL EA EV M E G Y L+
Sbjct: 616 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675
Query: 292 SKFKRYKR 299
++ + KR
Sbjct: 676 DRYFKVKR 683
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 133/301 (44%), Gaps = 16/301 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+ I++ + + GL + + F + + P +Y A++HA L ++
Sbjct: 468 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 527
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH---- 116
+++ M EG P+I+TY+ ++ + G++++ ++ + M S PD
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFK 587
Query: 117 ------------TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
TY LL K + A LL+ M G +P+ + + L+DGL + G
Sbjct: 588 QYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVG 647
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
LD + EM+ G + Y+ +I Y + A + M+ PNV Y
Sbjct: 648 KLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYT 707
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
MI G C GK DEA +M+ ME +GC PN + Y ++ GK+ E++ M K
Sbjct: 708 EMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 767
Query: 285 G 285
G
Sbjct: 768 G 768
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLF-------------NFRPF 44
M+ G T++ LI C G+V A ++ ER SK + RP
Sbjct: 538 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 597
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A+L + + + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 598 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 657
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM GF +TY+ L+ K + A +L+ M E P+V+ +T ++DGL + G
Sbjct: 658 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 717
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D M KGC P+VV YT MI + G++E +L + M +KG PN TY
Sbjct: 718 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 777
Query: 225 SMIRGFCMAGKFDEACTMMKEME 247
+I C G D A +++EM+
Sbjct: 778 VLIDHCCKNGALDVAHNLLEEMK 800
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 13/290 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GFP T T++ LI +V LA KV+ + +++ + P Y ++ L
Sbjct: 659 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN---SCAPNVVIYTEMIDGLCK 715
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + Q M ++G P+++TY ++ +GK++ LL+ MG G +P++ T
Sbjct: 716 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ K A NLL MK+ + + +++G ++ DE+
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK--EFIESLGLLDEIG 833
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ--LPNVFTYNSMIRGFCMAGK 235
P + Y ++I + I A LE A L + + T + TYNS+I C+A K
Sbjct: 834 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 893
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA---HEVIRHMV 282
+ A + EM +G P + +L+ L K++EA + I HMV
Sbjct: 894 VETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMV 943
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 132/297 (44%), Gaps = 9/297 (3%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN P T + LI E L + ++ + + + P +Y+ +L L +Q
Sbjct: 255 ENFVPDTV-FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 313
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V M EG P +N ++ A G ++LL +M + G P + YNIL+
Sbjct: 314 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 373
Query: 123 HVLGKGDKPLAALNLLN-------HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ GDK +LL+ M G + ++ ++ L AG + E
Sbjct: 374 GSIC-GDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 432
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +G +PD Y+ ++ A ++E A LF+ M G + +V+TY M+ FC AG
Sbjct: 433 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 492
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++A EM GC PN + Y L+ A K++ A+E+ M+ +G ++V+
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 549
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 122/282 (43%), Gaps = 15/282 (5%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
N+L+ C G +A +E + K F FRP +++YN ++ A L + +++
Sbjct: 162 LNVLVRKHCRNGSFSIA---LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHR 218
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+MS D T + C Y L K+ ++ L + F PD Y L+ L +
Sbjct: 219 EMSLANLRMDGFT---LRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEAS 275
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A++ LN M+ P+V+ ++TL+ G L CK + M +GC P +
Sbjct: 276 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 335
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK------FDEACTMM 243
++ +Y +G+ A L M+ G +P YN +I C D A
Sbjct: 336 SLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAY 395
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + G N + ++ L +AGK +A VIR M+ +G
Sbjct: 396 SEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 437
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 127/305 (41%), Gaps = 42/305 (13%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C V ARK+++ + P + Y+A++ L + + + V +MS+ G+
Sbjct: 609 CKSHRVEEARKLLDAM---SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFP 665
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TY+ ++ +++ + D ++L +M + +P+ Y ++ L K K A L
Sbjct: 666 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 725
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M+E G P+V+ +T ++DG G ++ C + M +KG P+ V Y V+I
Sbjct: 726 MQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 785
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G L+ A +L + M + Y +I GF +F E+ ++ E+ P V
Sbjct: 786 NGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSV 843
Query: 258 Y-------------------------------------NTLVSNLRNAGKLAEAHEVIRH 280
Y N+L+ +L A K+ A ++
Sbjct: 844 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSE 903
Query: 281 MVEKG 285
M +KG
Sbjct: 904 MTKKG 908
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 65/154 (42%), Gaps = 3/154 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L +K+ F PS + L+ +A LD+ EM+ D
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S G+ +A L + T+ +P+ Y +I G C A F+EA + M + C P
Sbjct: 238 SLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
N + Y+TL+ N +L V+ M+ +G Y
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 328
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 143/287 (49%), Gaps = 10/287 (3%)
Query: 1 MIE-NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+E + FP +T+NIL+ +E F + +P +Y I+ L +
Sbjct: 290 MVECDNFPDI-QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQ 348
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + + + A D+++Y V+ ++D+ L +++ +G SP+ Y
Sbjct: 349 RMEEAKAFFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYT 402
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMAN 178
++ L K + L M P+ +T ++DGL +A L DACK F++M
Sbjct: 403 AVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACK-VFEQMVQ 461
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KGC+PD + YT +I + A ++++A+ L D M+TKG P TY S++ GFC +E
Sbjct: 462 KGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINE 521
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ +M RGC P ++ +L+S + G+ EA++V+ M +G
Sbjct: 522 AKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARG 568
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 129/266 (48%), Gaps = 4/266 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
L+ + G V AR V + I+ P +Y I+ I + + + M+ G
Sbjct: 582 LLFSTGRVPEARHVFDSMIEK---GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 638
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
PD YN +M +L ++DQ + D M SG P+ T+N+L+H L K K A
Sbjct: 639 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 698
Query: 136 NLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+L M E P+++ +T L+DGL +AG + F EM ++G +P+ YT +I S
Sbjct: 699 SLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYS 758
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
AG + +A+ L + M+ G P+V Y+++I G + D A + +EM RGC PN
Sbjct: 759 LAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPN 818
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRH 280
+ Y L R AG+ + V +H
Sbjct: 819 EVTYKVLRRGFRAAGRALDLEAVKQH 844
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 121/236 (51%), Gaps = 1/236 (0%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L+ L R+ ++ +M G P I++YN V+ + K+D+ ++ + M
Sbjct: 24 NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID 83
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+G PD + L+H K +P LLN + F P V +T+++ G +AG+LD
Sbjct: 84 NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-RFRPDVFLYTSVIHGYCKAGDLDT 142
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+EM GC+PD Y V+I G +++A +LF+ M G L + T+ ++I
Sbjct: 143 GFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIE 202
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GK DEAC + +EM RG P V ++L+ L AGK+ EA+E+ + +V K
Sbjct: 203 ALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAK 258
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +Y ++ L + V++QM +G PD +TY ++ + K+D+ +L
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 490
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LD M G P TY ++H K D A ++ M+E G +P + FT+L+
Sbjct: 491 LDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + EM +GC PDV+ YT +I + G + +A+ +FD MI KG P+ T
Sbjct: 551 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I+ F G + A +++ M G P+ YN+L+ ++ +A V MV
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670
Query: 283 EKG 285
G
Sbjct: 671 ASG 673
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 1/217 (0%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD++ NIV+ + K+D+ L EM G P +YN ++ L
Sbjct: 9 KEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASI 68
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK A N M + G +P V+ FTTL+ G +AG ++ A K PDV Y
Sbjct: 69 DKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRFRPDVFLY 127
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I Y AG+L+ + + M+ G +P+ Y +I C G+ DEA + + M
Sbjct: 128 TSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRK 187
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC +++ + TL+ L N GKL EA E+ R M+E+G
Sbjct: 188 SGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG 224
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 119/239 (49%), Gaps = 1/239 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y +++ L + V+ M ++G APD LTY ++ ++G ++ +L+ M
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+SG PD YN L+ K ++ A + + M G P+ + F LM GL + G D
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 695
Query: 168 ACKYFFDEMANKGCMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F EM K +P +V YT++I AG + +A F MI +G +P TY S+
Sbjct: 696 RAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSL 755
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I AG+ EA ++++M G NP+ Y+ L++ L ++ + A +V + M+++G
Sbjct: 756 IYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRG 814
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SY ++ L ++ +++++ G +P+++ Y V+ + G+++ + ++M
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDM 424
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
S P TY +++ L K A + M + G P + +TTL+DG S+A +
Sbjct: 425 SGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKM 484
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + D M KG P V Y ++ + + +A+++ M +G P +F + S+
Sbjct: 485 DEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSL 544
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + G+ +EA ++ EM +RGC P+ ++Y +L+ L + G++ EA V M+EKG
Sbjct: 545 LSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKG 603
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ LI ++ ARK+++ + P +Y +I+H
Sbjct: 459 MVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK---GPEPTAVTYGSIVHGFCK 515
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V QM + G P + + ++ G+ ++ +++L EM G +PD
Sbjct: 516 LDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVIL 575
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ +L + A ++ + M E G P L + T++ S+ GN++A + MA
Sbjct: 576 YTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMA 635
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD Y ++ Y+ +++A ++D M+ G PN T+N ++ G GK D
Sbjct: 636 KSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTD 695
Query: 238 EACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ KEM E P + Y L+ L AG+++EA + M+++G
Sbjct: 696 RAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 99/183 (54%), Gaps = 1/183 (0%)
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM +G PD NI+L+ L K K A+ L M +G +P+++ + T++ GL+
Sbjct: 8 LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+D FF+ M + GC PDV+ +T +I + AG+ + L + + + + P+VF
Sbjct: 68 IDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR-PDVFL 126
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S+I G+C AG D +++EM + GC P+ Y L+ L G++ EA+E+ M
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMR 186
Query: 283 EKG 285
+ G
Sbjct: 187 KSG 189
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 7/302 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+NG F LI C G+ + ++ + +K FRP Y +++H
Sbjct: 81 MIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK----RFRPDVFLYTSVIHGYCK 136
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++M G PD Y +++ +LG++D+ + L + M +SG D+ T
Sbjct: 137 AGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVT 196
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ L K A L M E G++P + +L+ L +AG +D + +
Sbjct: 197 FMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVV 256
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K V Y ++ Y G ++ L M+ P++ TYN ++ GF A + D
Sbjct: 257 AKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLD 316
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
+A + K + S GC PN Y T++ L +A ++ EA ++ Y ++
Sbjct: 317 DALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADS 376
Query: 298 KR 299
KR
Sbjct: 377 KR 378
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F K K P +Y A++ LL + + ++ MS P TY +V+
Sbjct: 384 ELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGL 443
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ L ++ ++M + G PD TY L+ K K A LL+ M G +P+
Sbjct: 444 CKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTA 503
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + +++ G + ++ K +M +GC P + +T +++ Y++ G E+A +
Sbjct: 504 VTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTE 563
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M +G P+V Y S+I G+ EA + M +GC P+ L Y T++ N G
Sbjct: 564 MTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGN 623
Query: 271 LAEAHEVIRHMVEKG 285
+ A E++ M + G
Sbjct: 624 VEAAGEILELMAKSG 638
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%)
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+E+A D M T G +P+V N ++ G C A K D+A + EM S GC P + YNT
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++S L + K+ EA++ M++ G
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNG 85
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 143/285 (50%), Gaps = 6/285 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G +T+N +I C G++ A + E+ +K P +YN +++ L
Sbjct: 444 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL---PTVVTYNTLINGYLTKGN 500
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M + G PD TYN ++ + GKL+ EM G +P+ +Y
Sbjct: 501 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTT 560
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K K AL+LL M+E+G +P+V + +++GLS+ + D+MA +G
Sbjct: 561 LIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQG 620
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ YT +I G + A +F M + LPN++TY+S+I G C GK DEA
Sbjct: 621 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 680
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEME +G P+ + + +L+ G++ A ++R MV+ G
Sbjct: 681 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVG 725
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 134/289 (46%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
M++ G T+N LI C G A K+ L N + +YN I+ L
Sbjct: 406 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ----TYNEIIKGLC 461
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++++M G P ++TYN ++ G ++ RLLD M +G PD
Sbjct: 462 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 521
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ K K +A M E G +P+ + +TTL+DG S+ G +D + M
Sbjct: 522 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM 581
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P+V Y +I +A+ + D M +G LPNV TY ++I G C G+
Sbjct: 582 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRT 641
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +ME R C PN Y++L+ L GK EA +++ M KG
Sbjct: 642 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 690
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 10/307 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNF--RPFKNSYNAILHALLGI 58
M+ +G + TFN LI + G R+ I S++F + P +Y +++
Sbjct: 231 MLNSGIQPSLLTFNTLINILSKKGKVREA--ELILSQIFQYDLSPDVFTYTSLILGHCRN 288
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R L V+ +M EG P+ +TY+ ++ G++D+ +L+EM G P +TY
Sbjct: 289 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 348
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + L + A+ L+ MK+ G P+V +T L+ GLSR G L+ + +M
Sbjct: 349 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 408
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G +P+ V Y +I G A +F M G L N TYN +I+G C+ G ++
Sbjct: 409 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 468
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + ++M G P + YNTL++ G + A ++ M E G Y LVS
Sbjct: 469 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 528
Query: 293 KFKRYKR 299
F ++ +
Sbjct: 529 GFSKWGK 535
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 142/283 (50%), Gaps = 6/283 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T T+N LI T G V A ++++ K P + +YN ++
Sbjct: 476 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM---KENGCEPDEWTYNELVSGFSK 532
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Q+M + G P+ ++Y ++ + GK+D LL+ M G +P+ +
Sbjct: 533 WGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVES 592
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +++ L K ++ A + + M E G P+V+ +TTL+DGL R G F +M
Sbjct: 593 YNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 652
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C+P++ Y+ +I G+ ++A+ L M KG P+ T+ S+I GF + G+ D
Sbjct: 653 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 712
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
A +++ M GC PN+ Y+ L+ L+ L E ++H
Sbjct: 713 HAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQH 755
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G + T++ LI C G V A ++E I+ + P +Y + AL
Sbjct: 301 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI---EPTVYTYTLPITALCA 357
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + +M G P++ TY ++ RLGKL+ L +M + G P+ T
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 417
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ L G + AL + + M+ G + + ++ GL G+++ F++M
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +P VV Y +I Y+ G + A L D M G P+ +TYN ++ GF GK +
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +EM G NPN + Y TL+ GK+ A ++ M E G
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMG 585
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++S G+ + + N ++ + ++ L +M SG P T+N L+++L K
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A +L+ + + P V +T+L+ G R NLD FD M +GC P+ V Y+
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G +++A D+ + MI KG P V+TY I C +EA ++ M+ R
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN Y L+S L GKL A + M+++G
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 410
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 30/298 (10%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ LI C G A K+ K K P +Y+++++ L
Sbjct: 616 MAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL---PNLYTYSSLIYGLCQ 672
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + ++M +G APD +T+ ++ LG++D LL M G P++ T
Sbjct: 673 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRT 732
Query: 118 YNILLHVLGKG----DKPLAAL--------------------NLLNHMKEVGFDPSVLHF 153
Y++LL L K ++ +A NLL M E+G +P++ +
Sbjct: 733 YSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY 792
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+TL+ GL R G + +M +G PD Y ++ ++ E++ A +F +
Sbjct: 793 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEA 852
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
KG ++ Y ++I C AG+ +EA + M + N + +V+ LV L G+L
Sbjct: 853 KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 910
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P ++Y+ ++ L ++ E + + M + G+ PD Y ++ A + ++D +
Sbjct: 786 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 845
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ + GF Y L+ L K + A L ++M E ++ + +T L+DGL
Sbjct: 846 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 905
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ G LD C M +K P++ Y ++ G+ +++ L D +
Sbjct: 906 KEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 1 MIENGF-PTTARTFNILICTCG--EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E GF P +++LI C EV A K+ I++K F+ + Y A++ AL
Sbjct: 815 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHS-IEAK--GFQLHLSIYRALICALCK 871
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + ++ M ++ + D + + +++ + G+LD +LL M F+P+ T
Sbjct: 872 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 931
Query: 118 YNILLHVLGKGDKPLAALNLLNHMK 142
Y IL L + K + + L + +K
Sbjct: 932 YVILGRELSRIGKSIESEPLADKLK 956
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 125/273 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI GL + + P +YNAIL+ L I +Y + V +M
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+ TYN ++ R + + + DEM R G PD +++ L+ VL +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL M+ G P + +T L+DG R G L DEM +GC DVV Y
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ A LF+ M+ +G +P+ +T+ ++IRG+C G D+A + + M
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + YNTL+ AG++ A E+ M+ K
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G A T+N L IC + A+++ + + + P S+++++ L
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVL---PDLVSFSSLIGVL-- 407
Query: 58 IRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R L + + +++M G PD + Y I++ R G L ++ DEM G D
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ L K A L N M E G P FTTL+ G + GN+D F+
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PD V Y +I + AGE+ +A++L+D MI K +P+ +Y +++ GFC +G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M +G PN + NTL+ +G + +A+E + M+ G
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN L+ L + + + ++ +M + G PD T+ ++ + G +D+ L + M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R+ PD TYN L+ K + A L + M P + + T+++G +G L
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D+M KG P++V +I Y +G++ KA + MI+ G +P+ F+YN++
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+ ++A ++ EME RG N + YN +++ GK+ EA +V+R M+E G
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ N +++AL R+++ + + M +G DI+TYN ++ A R G +++ +LL+
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN +L+ L K K A ++L M ++G P+ + TL+ + R N+
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FDEM+ +G +PD+V ++ +I G L +A F M G +P+ Y +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GFC G +A M EM +RGC + + YNT ++ L A+A + MVE+G
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+M G D++TYN + C K D L +EM G PDF+T+ L+
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADM---LFNEMVERGMVPDFYTFTTLIRGY 512
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ALNL M P + + TL+DG +AG + K +D+M K +PD
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y ++ + ++G L +A +L D M+ KG PN+ T N++I+G+C +G +A + +
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSK 632
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M S G P+ YNTL+ L +A +I M ++G ++++
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M PD +TYN ++ + G++ + L D+M R PD +Y +L+
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
ALNL + M E G P+++ TL+ G R+G++ + +M + G +PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y+ LEKA L + M +G N+ TYN ++ GFC GK EA ++++M
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G NP+ Y++L++ + + EA M+++G
Sbjct: 704 IEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 137/309 (44%), Gaps = 17/309 (5%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVER-FIKSKLFN-----FRPFK------ 45
M+ + + LI TC G VGL ++ R ++++K F+ +
Sbjct: 161 MVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSV 220
Query: 46 --NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
N+ N +L L+ L +Y ++ G ++ T NI++ A + K + L
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M G D TYN L++ + A LLN G +P +L + ++ GL +
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G D K EM G P+ Y ++ + +AQ++FD M +G LP++ ++
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+S+I G +A +EME G P+ ++Y L+ G L++A ++ M+
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 284 KGKYIHLVS 292
+G ++ +V+
Sbjct: 461 RGCFMDVVT 469
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 3/291 (1%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N LI C G +G K + P + +YN ++
Sbjct: 185 GVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENV 244
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V+ +M +G P+++TYNI++ GK+D+ L D+M S P+ T+N+L
Sbjct: 245 SGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVL 304
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K A+NL N M++ G DP+ + +TTL+D + G ++ ++ M ++G
Sbjct: 305 INGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGI 364
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+V Y +I G+++ A+ L + M++K +V TYN +I C G+ +A
Sbjct: 365 FPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVK 424
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ EM +G NP+ + YNTL+ G L A V M KGK ++V+
Sbjct: 425 LLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 136/258 (52%), Gaps = 3/258 (1%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F ++ + F+ S N +L L+ + +E+VY++M +++++NIV+
Sbjct: 106 EAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGL 165
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFD 147
++GKL++ ++++M G SP+ TYN L+ +G+ K A +L M G
Sbjct: 166 CKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGIC 225
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P+ + + L+DG + N+ F EM +G P+VV Y ++I + G++++A L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
D M++ PNV T+N +I GFC +EA + +ME +G +PN + Y TL+
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345
Query: 268 AGKLAEAHEVIRHMVEKG 285
G++ +A + M+++G
Sbjct: 346 DGRMEDAFALYNMMIDRG 363
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
GF S++ L+ GL + ++ + EM + +V+ + +++ G+L +A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD---EACTMMKEMESRGCNPNFLVYNTL 261
D+ + M G PNV TYN++I G+C G+ +A ++KEM ++G PN + YN L
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNIL 234
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ ++ A V M +G ++V+
Sbjct: 235 IDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 145/276 (52%), Gaps = 6/276 (2%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI C + A +V++R ++SK +F P +YN ++ +L + L V
Sbjct: 161 YNALINGFCKMNRIDDATRVLDR-MRSK--DFSPDTVTYNIMIGSLCSRGKLDLALKVLN 217
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
Q+ + P ++TY I++ A G +D+ +L+DEM G PD TYN ++ + K
Sbjct: 218 QLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A ++ +++ G +P V+ + L+ L G + + +M ++ C P+VV Y+
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++IT+ G++E+A +L M KG P+ ++Y+ +I FC G+ D A ++ M S
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + YNT+++ L GK +A E+ + E G
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 6/228 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD+ YN ++ ++ ++D R+LD M FSPD TYNI++ L K AL +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
LN + P+V+ +T L++ G +D DEM ++G PD+ Y +I
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +++A ++ + KG P+V +YN ++R GK++E +M +M S C+PN +
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
Y+ L++ L GK+ EA +++ M EKG Y L++ F R R
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 141/292 (48%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M F T+NI+I C+ G++ LA KV+ + + N +P +Y ++ A +
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSD---NCQPTVITYTILIEATML 240
Query: 57 --GIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G+ + KL++ +M G PD+ TYN ++ + G +D+ ++ + G P
Sbjct: 241 EGGVDEALKLMD----EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YNILL L K L+ M DP+V+ ++ L+ L R G ++
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M KG PD Y +I ++ G L+ A + + MI+ G LP++ YN+++ C
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK D+A + ++ GC+PN YNT+ S L ++G A +I M+ G
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG 468
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N +I + G+ + E +L P SYN +L ALL +
Sbjct: 254 MLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGK 313
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +M E P+++TY+I++ R GK+++ LL M G +PD ++Y+
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + A+ L M G P ++++ T++ L + G D F ++ G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ Y M ++ ++G+ +A + M++ G P+ TYNSMI C G DEA
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M S +P+ + YN ++ A ++ +A V+ MV G
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNG 538
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 34/224 (15%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPD----------FHT------------------------ 117
R G + LL+ M R G++PD F T
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K ++ A +L+ M+ F P + + ++ L G LD +++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C P V+ YT++I + + G +++A L D M+++G P++FTYN++IRG C G D
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A M++ +E +GC P+ + YN L+ L N GK E +++ M
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 6/238 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL---IEWVY 68
T++ILI T G + + K P SY+ ++ A R+ +L IE++
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF--CREGRLDVAIEFLE 392
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+SD G PDI+ YN V+ + GK DQ + ++G G SP+ +YN + L
Sbjct: 393 TMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSS 451
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL+++ M G DP + + +++ L R G +D +M + P VV Y
Sbjct: 452 GDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+++ + A +E A ++ + M+ G PN TY +I G AG EA + ++
Sbjct: 512 NIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ +L+LL M G++P V+ T L+ G N+ E+ K PDV Y +
Sbjct: 106 IESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNAL 164
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + ++ A + D M +K P+ TYN MI C GK D A ++ ++ S C
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + Y L+ G + EA +++ M+ +G
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G A +++ LI C G + +A + +E I P +YN +L L
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL---PDIVNYNTVLATLCK 415
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDEMGRSGFSPDFH 116
+ ++ ++ + G +P+ +YN + A + G K+ H +L EM +G PD
Sbjct: 416 NGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSNGIDPDEI 474
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN ++ L + A LL M+ F PSV+ + ++ G +A ++ + M
Sbjct: 475 TYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESM 534
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
GC P+ YTV+I AG +A +L + ++
Sbjct: 535 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R+GN + + M KG PDV+ T +I + + KA + + + GQ P+VF
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDVF 159
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
YN++I GFC + D+A ++ M S+ +P+ + YN ++ +L + GKL A +V+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 282 V 282
+
Sbjct: 220 L 220
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 138/314 (43%), Gaps = 33/314 (10%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKS--KLFNFRPFKNS-YNAILHALLGIRQY 61
G P T + G + ++ F ++ L RP + YN ++ ALL
Sbjct: 85 GVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMV 144
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ VY M +G P++ TYN+++ A + ++ ++LDEM R G PD TY +
Sbjct: 145 GAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATI 204
Query: 122 LHVLGKGDK------------PLAA------------------LNLLNHMKEVGFDPSVL 151
+ VL K D+ P+AA ++++ M G P+V+
Sbjct: 205 VSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVI 264
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+TT++D +AG L M GC P+VV +T ++ G + A D++ M
Sbjct: 265 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 324
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +G P+ +YN +IRG C G A +++ ME GC PN Y+TL+ AG L
Sbjct: 325 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 384
Query: 272 AEAHEVIRHMVEKG 285
A + M G
Sbjct: 385 GGAISIWNDMSRSG 398
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFN-ILICTCGEVGLAR--KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
P A ++N I++ C E + VV + L +P +Y I+ A +
Sbjct: 223 AMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGL---QPNVITYTTIVDAFCKAGEL 279
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ + +M G P+++T+ ++ + G++ + M G++P +YNIL
Sbjct: 280 RMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNIL 339
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L A ++LN M++ G P+V ++TL+DG S+AG+L +++M+ GC
Sbjct: 340 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 399
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV YT M+ + +A+ L D M+ + PN T+N++IR C + A
Sbjct: 400 KPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALG 459
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM GC PN YN L+ L G +A ++ M G + LV+
Sbjct: 460 VFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVT 510
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ ++ C GE+ +A ++ R + + P ++ A++ L
Sbjct: 254 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMV---ITGCTPNVVTFTALVRGLFD 310
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++ M EG+AP ++YNI++ +G L +L+ M + G P+ T
Sbjct: 311 DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRT 370
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A+++ N M G P+V+ +T ++D + + K D+M
Sbjct: 371 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 430
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C P+ V + +I S + +A +F M G +PN TYN +I G G
Sbjct: 431 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 490
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M+ EM+S G + + YNT+VS L EA + M+ +G
Sbjct: 491 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG 538
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 12/298 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G+ + ++NILI C+ G++ A ++ + F P +Y+ ++
Sbjct: 324 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF---PNVRTYSTLIDGFSK 380
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYN---IVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
++ MS G P+++ Y V C K +Q L+D+M P+
Sbjct: 381 AGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL---MFNQAKSLIDKMLLENCPPN 437
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+N L+ L + AL + + M+ G P+ + L+ GL R GN +
Sbjct: 438 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 497
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM + G +V Y +++ +A MI +G PN FT++++I +C G
Sbjct: 498 EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 557
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ A M+ M C+ N LVY L++ L N KL +A + M+ +G Y + V+
Sbjct: 558 EVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 615
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
M ++G RT++ LI G++G A + +S N + N + L+
Sbjct: 359 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 418
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGFS 112
+ LI+ +M E P+ +T+N + +C R+G+ L FH EM R G
Sbjct: 419 FNQAKSLID----KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFH----EMRRHGCV 470
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ TYN L+H L + AL+++ M+ G + S++ + T++ GL + F
Sbjct: 471 PNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVF 530
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+M +G P+ ++ +I +Y GE+ A + M N+ Y ++ C
Sbjct: 531 VGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCN 590
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHM 281
K +A T + +M G PN + +N LV + RN G + E + I+H+
Sbjct: 591 QDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCI-EPSDFIQHI 639
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 139/280 (49%), Gaps = 4/280 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
++ F++L T + R + F + K + F P S NA L +LL + +
Sbjct: 166 SSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAF 225
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y++M P+ T N+V+CA +LG+LD+ + + +EMG GFSP+ +YN L + G
Sbjct: 226 YREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTL--IAGY 283
Query: 128 GDKPL--AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+K L +A+ L + M++ G P V+ F TL++G + G L F EM P
Sbjct: 284 CNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTT 343
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++I Y AG E LF+ M ++ TYN++I G C GK +A +++E
Sbjct: 344 VTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRE 403
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +G PN ++ L+ + A ++ + M++
Sbjct: 404 LDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSS 443
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 2/247 (0%)
Query: 42 RPFKNSY--NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
R + NSY N ++ A + + V+++M G++P++ +YN ++ G L
Sbjct: 233 RIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSA 292
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L M ++G PD T+N L++ K K A L MK + P+ + + L++G
Sbjct: 293 MKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILING 352
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
S+AGN + F+EM+ D++ Y +I G+ +KA L + KG +PN
Sbjct: 353 YSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPN 412
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
T++++I G C+ + + A + K M P + L+S A +++
Sbjct: 413 ASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLE 472
Query: 280 HMVEKGK 286
M+ + K
Sbjct: 473 EMLNRHK 479
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 109/263 (41%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T N++IC C ++G K F + F P SYN ++ + M
Sbjct: 240 TLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVM 299
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PD++T+N ++ ++GKL + +L EM SP TYNIL++ K
Sbjct: 300 EKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNC 359
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L M +L + L+ GL + G Y E+ KG +P+ ++ +
Sbjct: 360 EMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSAL 419
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + E+A ++ MI P T+ ++ FC +D A +++EM +R
Sbjct: 420 IYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHK 479
Query: 252 NPNFLVYNTLVSNLRNAGKLAEA 274
P+ L + L GK+ A
Sbjct: 480 APDVNNLYELCAGLGQCGKVKTA 502
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 97/231 (41%), Gaps = 17/231 (7%)
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
ILH L R++K E + + + I C+ KL F LL
Sbjct: 121 ILHILTKRRKFKSAESILRSI-------------IESCSIDFPSKL--FESLLYSYRLCD 165
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
SP H +++L K A + MK+ GF P+V + L D
Sbjct: 166 SSP--HVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIAL 223
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F+ EM P+ ++I + G L+KA +F+ M T G PNV +YN++I G+
Sbjct: 224 AFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGY 283
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
C G A + ME G P+ + +NTLV+ GKL EA ++ M
Sbjct: 284 CNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEM 334
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 106/252 (42%), Gaps = 6/252 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF ++N LI C G + A K+ K+ + P ++N +++ + +
Sbjct: 268 GFSPNVASYNTLIAGYCNKGLLSSAMKLRSVMEKNGV---PPDVVTFNTLVNGFCKVGKL 324
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ +M +P +TYNI++ + G + +RL +EM R D TYN L
Sbjct: 325 QEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNAL 384
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A L+ + E G P+ F+ L+ G + + M
Sbjct: 385 ILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSF 444
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P + ++++++ + + A L + M+ + + P+V + G GK A
Sbjct: 445 TPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMM 504
Query: 242 MMKEMESRGCNP 253
+ E+E++ P
Sbjct: 505 LCSELEAQRLLP 516
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 78/178 (43%), Gaps = 1/178 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
PTT T+NILI + G F + F + +YNA++ L + K +
Sbjct: 341 PTTV-TYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAY 399
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ +++ ++G P+ T++ ++ + + ++ ++ M +S F+P T+ +LL
Sbjct: 400 LVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFC 459
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + A+ LL M P V + L GL + G + E+ + +P+
Sbjct: 460 ENEDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQRLLPE 517
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 144/317 (45%), Gaps = 38/317 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIRQYKL 63
G+ + +N ++ + L RF S L + P +YN ++ AL G K
Sbjct: 151 GYVPSVLAYNAVLLALSDASLTS--ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKE 208
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + M G P+++TYN ++ A +R G++D RL+ M G P+ T+N +++
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ K K A + + M G P + + TL+ G +AG F EM KG MP
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328
Query: 184 DVVCYTVMITSYIAAGELEKA-------------------QDLFDGMITKGQL------- 217
DVV +T +I AG LE+A L DG KG L
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 388
Query: 218 ---------PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
P+V YN++I G+CM G+ DEA ++ EME++G P+ + Y+T++S
Sbjct: 389 RGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 448
Query: 269 GKLAEAHEVIRHMVEKG 285
A E+ + M+EKG
Sbjct: 449 CDTHSAFELNQQMLEKG 465
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 119/219 (54%), Gaps = 3/219 (1%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL-GKGDKPLA 133
GY P +L YN V+ A L R D M G +P+ +TYNIL+ L G+G +
Sbjct: 151 GYVPSVLAYNAVLLA-LSDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRK-E 208
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL++L M+ G P+V+ + TL+ RAG +D + M G P++V + M+
Sbjct: 209 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVN 268
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
AG++E A+ +FD M+ +G P+ +YN+++ G+C AG EA ++ EM +G P
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + + +L+ + AG L A ++R M E+G ++ V+
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVT 367
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TFN ++ C G++ ARKV + ++ L P SYN ++
Sbjct: 251 MREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGL---APDGVSYNTLVGGYCK 307
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
V+ +M+ +G PD++T+ ++ + G L++ L+ +M G + T
Sbjct: 308 AGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVT 367
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K AL + MK+ PSV+ + L++G G +D + EM
Sbjct: 368 FTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEME 427
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PDVV Y+ +I++Y + A +L M+ KG LP+ TY+S+IR C +
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLS 487
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A + K M G P+ Y +L+ G + A + MV+ G +V+
Sbjct: 488 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVT 542
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 135/301 (44%), Gaps = 17/301 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TF LI + G + K +P YNA+++ + +
Sbjct: 356 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGR 415
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M +G PD++TY+ ++ A + L +M G PD TY+
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 475
Query: 121 LLHVLGKGDKPLAALNLL-NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ VL G+K L+ ++L +M ++G P +T+L+DG + GN+++ D+M
Sbjct: 476 LIRVLC-GEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKA 534
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM------------- 226
G +PDVV Y+V+I + +AQ L + + +P Y+++
Sbjct: 535 GVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVL 594
Query: 227 --IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++GFCM G +EA + + M R N + VY+ L+ AG + +A + M++
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQG 654
Query: 285 G 285
G
Sbjct: 655 G 655
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 116/281 (41%), Gaps = 26/281 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSY----- 48
M + G TF LI C G V L R++ ER ++ F + +
Sbjct: 321 MTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGF 380
Query: 49 -NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+ L A+ G++Q ++ P ++ YN ++ +G++D+ LL EM
Sbjct: 381 LDDALLAVRGMKQCRI-------------KPSVVCYNALINGYCMVGRMDEARELLHEME 427
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G PD TY+ ++ K +A L M E G P + +++L+ L L
Sbjct: 428 AKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLS 487
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
F M G PD YT +I + G +E A L D M+ G LP+V TY+ +I
Sbjct: 488 DAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLI 547
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
G + + EA ++ ++ P Y+ L+ R A
Sbjct: 548 NGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKA 588
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 94/237 (39%), Gaps = 21/237 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ LI C G V A + ++ +K+ + P +Y+ +++ L
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVL---PDVVTYSVLINGLSK 552
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--CAKYRL-------------GKLDQFHRL 102
+ + + ++ E P Y+ +M C K L G +++ ++
Sbjct: 553 SARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKV 612
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
M ++ D Y++L+H + + AL+ M + GF P+ +L+ GL
Sbjct: 613 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFE 672
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
G + ++ N + D +I + G ++ D+ GM G LP+
Sbjct: 673 NGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729
>gi|224064580|ref|XP_002301519.1| predicted protein [Populus trichocarpa]
gi|222843245|gb|EEE80792.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 1/285 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQ 60
+ G+ T F+ +I G G + ++ F K + +P +YNA++ A G +
Sbjct: 104 LTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVE 163
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + ++ +M G PD +T+N ++ + G + L EM G D TYN
Sbjct: 164 FKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIFTYNT 223
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + KG + A +++ M P+V+ ++T++DG ++AG LD + F+EM G
Sbjct: 224 LLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLG 283
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D V Y +++ Y G E+A D+ M G +V TYN+++ G+ K+D
Sbjct: 284 ISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVR 343
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM++R +PN L Y+TL+ G EA +V R + G
Sbjct: 344 KVFEEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAG 388
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 126/269 (46%), Gaps = 14/269 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---AR----KVVERFIKSKLFNFRPFKNSYNAILH 53
M+ NG TFN L+ C + GL AR ++V R I +F +YN +L
Sbjct: 174 MLRNGMQPDRITFNSLLAVCSKGGLWEAARSLSCEMVNRGIDQDIF-------TYNTLLD 226
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A+ Q + + +M + P+++TY+ ++ + G+LD L +EM G S
Sbjct: 227 AVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMIDGYAKAGRLDDARNLFNEMKFLGISL 286
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YN LL + K + A+++ M+ G V+ + L+ G + D + F
Sbjct: 287 DRVSYNTLLSIYAKLGRFEEAMDVCREMENSGIRKDVVTYNALLGGYGKQYKYDVVRKVF 346
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+EM + P+++ Y+ +I Y G +A D+F G +V Y+++I C
Sbjct: 347 EEMKARHVSPNLLTYSTLIDVYSKGGLYREAMDVFREFKKAGLKADVVLYSALIDALCKN 406
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G + A +++ EM G PN + YN+++
Sbjct: 407 GLVESAVSLLDEMTKEGIRPNVVTYNSII 435
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+A++ L + + ++ + V++ EGY + ++ ++ A R G ++ ++ M
Sbjct: 81 SAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGYCNEAIKIFYSMKD 140
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLA-ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G P+ TYN ++ GKG L + + M G P + F +L+ S+ G +
Sbjct: 141 YGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNGMQPDRITFNSLLAVCSKGGLWE 200
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + EM N+G D+ Y ++ + G+L+ A ++ M K LPNV TY++MI
Sbjct: 201 AARSLSCEMVNRGIDQDIFTYNTLLDAVCKGGQLDMAFEIMSEMPAKNILPNVVTYSTMI 260
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ AG+ D+A + EM+ G + + + YNTL+S G+ EA +V R M G
Sbjct: 261 DGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREMENSG 318
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++ +I + G F + K + SYN +L + +++ V ++M
Sbjct: 255 TYSTMIDGYAKAGRLDDARNLFNEMKFLGISLDRVSYNTLLSIYAKLGRFEEAMDVCREM 314
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G D++TYN ++ + K D ++ +EM SP+ TY+ L+ V KG
Sbjct: 315 ENSGIRKDVVTYNALLGGYGKQYKYDVVRKVFEEMKARHVSPNLLTYSTLIDVYSKGGLY 374
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+++ K+ G V+ ++ L+D L + G +++ DEM +G P+VV Y +
Sbjct: 375 REAMDVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSLLDEMTKEGIRPNVVTYNSI 434
Query: 192 ITSYIAAGELEKAQD 206
I ++ E D
Sbjct: 435 IDAFGRPATTESVVD 449
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCY---- 188
A L ++ E G D L L++ SR D + E+ N+G C + C+
Sbjct: 9 AQEALQNVIEYGKDERALE-NVLLNFESRLSGSDDYVFLLRELGNRGDCKKAICCFEFAV 67
Query: 189 -------------TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ MI++ G++E A+ +F +T+G V+ ++++I + +G
Sbjct: 68 KRERKKNEQGKLASAMISTLGRLGKVEMAKTVFKAALTEGYGNTVYAFSAIISAYGRSGY 127
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG-KLAEAHEVIRHMVEKG 285
+EA + M+ G PN + YN ++ G + E+ M+ G
Sbjct: 128 CNEAIKIFYSMKDYGLKPNLVTYNAVIDACGKGGVEFKRVLEIFDEMLRNG 178
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTF-NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G + +I+ C C + R +V F + P ++Y A++H +
Sbjct: 321 MREKGIEADVYVYTSIISCNCRSGNVKRALV-LFDEMTDKGLIPSAHTYGALIHGVCKAG 379
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q + + + +M +G + + +N ++ G +D+ RL M + G D YN
Sbjct: 380 QMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYN 439
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+ L K ++ A LL M E G P+ + FTTL+D + GN K F EM K
Sbjct: 440 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 499
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +P+++ Y V+I Y G +++A L D + +G +P+V+T S+I G C+ GK D A
Sbjct: 500 GNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 559
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM RG PN + Y ++S L G+ EA ++ M E G
Sbjct: 560 LKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 605
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++H I + + + ++++M ++G D+ Y ++ R G + + L DEM
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 356
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P HTY L+H + K + AA L+N M+ G D + + F TL+DG +G +
Sbjct: 357 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 416
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D M KG DV Y + + ++A+ L M+ +G PN ++ ++
Sbjct: 417 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I +C G F EA + +EME +G PN + YN L+ G + EAH++ + +G
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 535
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 134/280 (47%), Gaps = 11/280 (3%)
Query: 17 ICTCGEVGLARK----VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+C G+V + RK V + +K+ + + F Y L L G+ + + M
Sbjct: 235 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD-LGGVAE------ILTLME 287
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
EG A +++TY +++ +GK+++ RL +EM G D + Y ++ +
Sbjct: 288 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 347
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL L + M + G PS + L+ G+ +AG ++A + +EM KG + V + +I
Sbjct: 348 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
Y +G +++A L M KG +VF YNS+ G C + DEA ++ M RG +
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 467
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN + + TL+ G EA V R M EKG ++++
Sbjct: 468 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIIT 507
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 135/275 (49%), Gaps = 14/275 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M + G +A T+ LI C G++ A+ +V ++ K + P I + L+
Sbjct: 356 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE-MQGKGIDLNP------VIFNTLID 408
Query: 57 GIRQYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G + +++ + M +G D+ YN + +L + D+ LL M G SP
Sbjct: 409 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 468
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ ++ L+ + K + A + M+E G P+++ + L+DG S+ GN+
Sbjct: 469 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 528
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DE+ N+G +PDV T +I G+++ A LFD M +G +PNV TY +MI G
Sbjct: 529 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 588
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
G+ +EA + EM+ G P+ VY++LV +L +A
Sbjct: 589 GRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 623
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+ M + GF D + + L L +G + + L M + + +V T ++DGL +
Sbjct: 179 EHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKR 238
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G+++ + DE+A KG +VV Y I Y +L ++ M +G NV TY
Sbjct: 239 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 298
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+I GF GK +EA + +EM +G + VY +++S +G + A + M +
Sbjct: 299 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 358
Query: 284 KG 285
KG
Sbjct: 359 KG 360
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ M +G+ D + + + A R G++D R M ++ I+L L K
Sbjct: 178 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 237
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
L++ + G +V+ + ++G + +L M +G +VV
Sbjct: 238 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 297
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT++I + G++E+AQ LF+ M KG +V+ Y S+I C +G A + EM
Sbjct: 298 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 357
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ Y L+ + AG++ A ++ M KG
Sbjct: 358 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 395
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 83/252 (32%), Gaps = 72/252 (28%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHR-----------------------------LLDEM 106
Y PD+ Y ++ YR K D+ H+ L+D+
Sbjct: 83 YKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDA 142
Query: 107 ------GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
R+ F F +++L V AL HM++ GF + L
Sbjct: 143 CNESKCNRAKFKEKF--FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLAL 200
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G +D+C FF M N D +T V
Sbjct: 201 RRGGQVDSCLRFFRRMVN-----------------------------LDVEVT------V 225
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
++ ++ G C G + +M E+ ++G N + YN + L E++
Sbjct: 226 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 285
Query: 281 MVEKGKYIHLVS 292
M ++G ++V+
Sbjct: 286 MEKEGVACNVVT 297
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 125/273 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI GL + + P +YNAIL+ L I +Y + V +M
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEM 353
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+ TYN ++ R + + + DEM R G PD +++ L+ VL +
Sbjct: 354 LQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHL 413
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL M+ G P + +T L+DG R G L DEM +GC DVV Y
Sbjct: 414 YQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ A LF+ M+ +G +P+ +T+ ++IRG+C G D+A + + M
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + YNTL+ AG++ A E+ M+ K
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK 566
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G A T+N L IC + A+++ + + + P S+++++ L
Sbjct: 353 MLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVL---PDLVSFSSLIGVL-- 407
Query: 58 IRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R L + + +++M G PD + Y I++ R G L ++ DEM G D
Sbjct: 408 ARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDV 467
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ L K A L N M E G P FTTL+ G + GN+D F+
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PD V Y +I + AGE+ +A++L+D MI K +P+ +Y +++ GFC +G
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M +G PN + NTL+ +G + +A+E + M+ G
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNG 637
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN L+ L + + + ++ +M + G PD T+ ++ + G +D+ L + M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R+ PD TYN L+ K + A L + M P + + T+++G +G L
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D+M KG P++V +I Y +G++ KA + MI+ G +P+ F+YN++
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+ ++A ++ EME RG N + YN +++ GK+ EA +V+R M+E G
Sbjct: 649 IDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 123/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ N +++AL R+++ + + M +G DI+TYN ++ A R G +++ +LL+
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN +L+ L K K A ++L M ++G P+ + TL+ + R N+
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FDEM+ +G +PD+V ++ +I G L +A F M G +P+ Y +
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GFC G +A M EM +RGC + + YNT ++ L A+A + MVE+G
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERG 497
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+M G D++TYN + C K D L +EM G PDF+T+ L+
Sbjct: 456 DEMLARGCFMDVVTYNTFLNGLCKKKMFADADM---LFNEMVERGMVPDFYTFTTLIRGY 512
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ALNL M P + + TL+DG +AG + K +D+M K +PD
Sbjct: 513 CKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDH 572
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y ++ + ++G L +A +L D M+ KG PN+ T N++I+G+C +G +A + +
Sbjct: 573 ISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSK 632
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M S G P+ YNTL+ L +A +I M ++G ++++
Sbjct: 633 MISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M PD +TYN ++ + G++ + L D+M R PD +Y +L+
Sbjct: 524 LFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFC 583
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
ALNL + M E G P+++ TL+ G R+G++ + +M + G +PD
Sbjct: 584 SSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSF 643
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y+ LEKA L + M +G N+ TYN ++ GFC GK EA ++++M
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G NP+ Y++L++ + + EA M+++G
Sbjct: 704 IEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRG 742
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 137/309 (44%), Gaps = 17/309 (5%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVER-FIKSKLFN-----FRPFK------ 45
M+ + + LI TC G VGL ++ R ++++K F+ +
Sbjct: 161 MVRKSGVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSV 220
Query: 46 --NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
N+ N +L L+ L +Y ++ G ++ T NI++ A + K + L
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M G D TYN L++ + A LLN G +P +L + ++ GL +
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G D K EM G P+ Y ++ + +AQ++FD M +G LP++ ++
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+S+I G +A +EME G P+ ++Y L+ G L++A ++ M+
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 284 KGKYIHLVS 292
+G ++ +V+
Sbjct: 461 RGCFMDVVT 469
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 135/280 (48%), Gaps = 13/280 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSK---LFNFRPFKNSYNAILHALLGIRQYKLIE 65
T+N++I GE+ A ++V+R SK F F P Y A + + ++
Sbjct: 270 TYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGY----FARGSVEKAGALQ 325
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+M +EG P ++TYN ++ +R G ++ EM G PD TYN L++
Sbjct: 326 L---EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGY 382
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K AL L +K G PSVL + L+DG R G+L+ + F EM +GC PDV
Sbjct: 383 CKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDV 442
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
YT+++ L ++ FD M++KG P+ F YN+ I + G EA + +
Sbjct: 443 STYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEV 502
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M SRG + + + YN + L +G L +A+ + MV G
Sbjct: 503 MISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 135/320 (42%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T T+N +I G +F++ + P +YN++++
Sbjct: 328 MENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGN 387
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K W++ + G AP +LTYNI++ RLG L++ R EM G PD TY I
Sbjct: 388 LKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTI 447
Query: 121 LLH-----------------VLGKGDKP------------------LAALNLLNHMKEVG 145
L++ +L KG +P A L M G
Sbjct: 448 LMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG 507
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ + +DGL ++GNL + +M + G PD + YT +I ++ G L +A+
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREAR 567
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D+FDGM+ G P+ TY I +C G A ++M G PN + YN L+ L
Sbjct: 568 DIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHAL 627
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+ A++ M+E+G
Sbjct: 628 CRMGRTNLAYQHFHEMLERG 647
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 143/316 (45%), Gaps = 43/316 (13%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
F T AR N TC + LA F + PF N +L AL ++ +
Sbjct: 164 FNTRAR--NPAPSTCSTLCLAA-----FREMAHHGVPPFIKECNLVLRALRDEARWDDMR 216
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR--SGFSPDFHTYNILLH 123
VY +M G P I+TYN ++ + +R G++DQ +LL EM G P TYN++++
Sbjct: 217 SVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVIN 276
Query: 124 VLGKGDKPLAALNLLNHMK----------------------------------EVGFDPS 149
L + + A L++ M+ G P+
Sbjct: 277 GLARKGELEKAAQLVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPT 336
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
V+ + T++ G+ R+GN++A + F EM G +PD++ Y +I Y AG L++A LF
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG 396
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ G P+V TYN ++ G+C G +EA +EM +GC P+ Y L++ R
Sbjct: 397 DLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVR 456
Query: 270 KLAEAHEVIRHMVEKG 285
LA E M+ KG
Sbjct: 457 NLAMVREFFDEMLSKG 472
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 121/284 (42%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + T+NIL+ C G++ AR+ + ++ +P ++Y +++ +R
Sbjct: 402 GLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQ---GCQPDVSTYTILMNGSRKVRNL 458
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ + +M +G PD YN + A+ LG + +L + M G S D TYNI
Sbjct: 459 AMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIF 518
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L K A L M G P + +T L+ G L + FD M G
Sbjct: 519 LDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGL 578
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P V YTV I +Y G L A F M+ +G PN TYN +I C G+ + A
Sbjct: 579 PPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQ 638
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM RG +PN Y L+ G EA + M + G
Sbjct: 639 HFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHG 682
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 115/261 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+ IL+ +V V E F + +P +YN + A L +
Sbjct: 433 MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGS 492
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M G + D +TYNI + + G L + L +M G PD TY
Sbjct: 493 TSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTC 552
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H + + A ++ + M G PS + +T + R GNL + +F +M +G
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEG 612
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y V+I + G A F M+ +G PN +TY +I G C G ++EA
Sbjct: 613 VRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAI 672
Query: 241 TMMKEMESRGCNPNFLVYNTL 261
+ EM G +P+ +N L
Sbjct: 673 RLYSEMHQHGIHPDHCTHNAL 693
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN L L K ++ +M +G PD +TY ++ A G+L + + D M
Sbjct: 514 TYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGM 573
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
SG P TY + +H + +A M E G P+ + + L+ L R G
Sbjct: 574 LVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRT 633
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F EM +G P+ YT++I G E+A L+ M G P+ T+N++
Sbjct: 634 NLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNAL 693
Query: 227 IRGF 230
+GF
Sbjct: 694 FKGF 697
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 6/133 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G P +A T+ + I C G + A ++ ++ + RP + +YN ++HAL
Sbjct: 573 MLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV---RPNEVTYNVLIHALCR 629
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + L + +M + G +P+ TY +++ + G ++ RL EM + G PD T
Sbjct: 630 MGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCT 689
Query: 118 YNILLHVLGKGDK 130
+N L +G
Sbjct: 690 HNALFKGFDEGQS 702
>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
Length = 550
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N +IC C G E F + + +YN ++ L R+
Sbjct: 251 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 310
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + +M +G +P++++YN ++ +G LD+ L ++M SG SP TYNIL+
Sbjct: 311 ERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAG 370
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ +++ M+ G PS + +T LMD L R+ N++ + M G + D
Sbjct: 371 FSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 430
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ Y V+I G++++A LF + PN YN+MI G+C G A ++K
Sbjct: 431 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLK 490
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM G PN YN+ + L K EA +++ M+E G
Sbjct: 491 EMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELG 531
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +LI ++GL + +E + K KL P +YN+++ + ++ +M
Sbjct: 223 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 282
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKG 128
+ G A +++TYN ++ + ++ + RL+ M R G SP+ +YN L+ +G
Sbjct: 283 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNL 342
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK A +L N MK G PS+ + L+ G S A N EM +G P V Y
Sbjct: 343 DK---ASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 399
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ + + + +EKA ++ M G + +++ Y +I G C+ G EA + K ++
Sbjct: 400 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 459
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN ++YNT++ G A +++ M E G ++ S
Sbjct: 460 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 503
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 7/226 (3%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLG 126
QM G P T+N ++ + ++ R+ +E + D +++ I++ +G
Sbjct: 107 QMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCEVG 165
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK +L M+E+G P+V+ +TTL+DG + G+++ K F +M + +
Sbjct: 166 YLDK---GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQY 222
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YTV+I + G + +L++ M G +PNV+TYNSMI C GK + A + EM
Sbjct: 223 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 282
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG N + YNTL+ L ++ EA ++ M G +L+S
Sbjct: 283 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLIS 328
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V QM + G +P+++ Y ++ + G +++ +L +MG + +TY +L++
Sbjct: 173 VLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFF 232
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L MK G P+V + +++ G L+ FDEM +G +VV
Sbjct: 233 KMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVV 292
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + +A+ L M G PN+ +YN++I G+C G D+A ++ +M
Sbjct: 293 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 352
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S G +P+ YN L++ A A +++R M +G
Sbjct: 353 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 391
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N +IC C G E F + + +YN ++ L R+
Sbjct: 264 GIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEA 323
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + +M +G +P++++YN ++ +G LD+ L ++M SG SP TYNIL+
Sbjct: 324 ERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAG 383
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ +++ M+ G PS + +T LMD L R+ N++ + M G + D
Sbjct: 384 FSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVAD 443
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ Y V+I G++++A LF + PN YN+MI G+C G A ++K
Sbjct: 444 IYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLK 503
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM G PN YN+ + L K EA +++ M+E G
Sbjct: 504 EMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELG 544
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +LI ++GL + +E + K KL P +YN+++ + ++ +M
Sbjct: 236 TYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM 295
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKG 128
+ G A +++TYN ++ + ++ + RL+ M R G SP+ +YN L+ +G
Sbjct: 296 RERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNL 355
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK A +L N MK G PS+ + L+ G S A N EM +G P V Y
Sbjct: 356 DK---ASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTY 412
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ + + + +EKA ++ M G + +++ Y +I G C+ G EA + K ++
Sbjct: 413 TILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDE 472
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN ++YNT++ G A +++ M E G ++ S
Sbjct: 473 MHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVAS 516
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 113/228 (49%), Gaps = 7/228 (3%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---V 124
+ QM G P T+N ++ + ++ R+ +E + D +++ I++
Sbjct: 118 FNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNET-KGNVKLDVYSFGIMIKGCCE 176
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+G DK +L M+E+G P+V+ +TTL+DG + G+++ K F +M + +
Sbjct: 177 VGYLDK---GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVAN 233
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
YTV+I + G + +L++ M G +PNV+TYNSMI C GK + A +
Sbjct: 234 QYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFD 293
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM RG N + YNTL+ L ++ EA ++ M G +L+S
Sbjct: 294 EMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLIS 341
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V QM + G +P+++ Y ++ + G +++ +L +MG + +TY +L++
Sbjct: 186 VLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFF 245
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L MK G P+V + +++ G L+ FDEM +G +VV
Sbjct: 246 KMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVV 305
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + +A+ L M G PN+ +YN++I G+C G D+A ++ +M
Sbjct: 306 TYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQM 365
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S G +P+ YN L++ A A +++R M +G
Sbjct: 366 KSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARG 404
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F VL +++ R+ + ++F++M +G +P + ++ I + EKA
Sbjct: 91 FPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAW 150
Query: 206 DLFDGMITKGQLP-NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+F+ TKG + +V+++ MI+G C G D+ ++ +ME G +PN +VY TL+
Sbjct: 151 RVFNE--TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDG 208
Query: 265 LRNAGKLAEAHEVIRHMVE 283
G + ++ M E
Sbjct: 209 CCKNGDIERGKQLFYKMGE 227
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 140/285 (49%), Gaps = 10/285 (3%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G +T+N +I C G++ A + E+ +K P +YN +++ L
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL---PTVVTYNTLINGYLTKGN 458
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M + G PD TYN ++ + GKL+ EM G +P+ +Y
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K K AL+LL M+E+G +P+V + +++GLS+ + D+M +G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ YT +I G + A +F M + LPN++TY+S+I G C GK DEA
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEA- 637
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M GC P Y+TLVS L G+ EA ++++ M E+G
Sbjct: 638 ---ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 679
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T T+ + I + + +E + K RP +Y A++ L + +
Sbjct: 294 MIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGK 353
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +Y +M EG P+ +TYN ++ G+ ++ M G + TYN
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNE 413
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L G A+ L M ++G P+V+ + TL++G GN++ D M G
Sbjct: 414 IIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENG 473
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD Y +++ + G+LE A F M+ G PN +Y ++I G GK D A
Sbjct: 474 CEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIAL 533
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++K ME GCNPN YN +++ L + +EA ++ MVE+G
Sbjct: 534 SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 10/307 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNF--RPFKNSYNAILHALLGI 58
M+ +G + TFN LI + G R+ I S++F + P +Y +++
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREA--ELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R L V+ +M EG P+ +TY+ ++ G++D+ +L+EM G P +TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + L + A+ L+ MK+ G P+V +T L+ GLSR G L+ + +M
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G +P+ V Y +I G A +F M G L N TYN +I+G C+ G ++
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + ++M G P + YNTL++ G + A ++ M E G Y LVS
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486
Query: 293 KFKRYKR 299
F ++ +
Sbjct: 487 GFSKWGK 493
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 128/281 (45%), Gaps = 8/281 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
M++ G T+N LI C G A K+ L N + +YN I+ L
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ----TYNEIIKGLC 419
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++++M G P ++TYN ++ G ++ RLLD M +G PD
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ K K +A M E G +P+ + +T L+DG S+ G +D M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P+V Y +I +A+ + D M+ +G LPNV TY ++I G C G+
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
A + +ME R C PN Y++L+ L GK EA +
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM 640
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++S G+ + + N ++ + ++ L +M SG P T+N L+++L K
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A +L+ + + P V +T+L+ G R NLD FD M +GC P+ V Y+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G +++A D+ + MI KG P V+TY I C +EA ++ M+ R
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN Y L+S L GKL A + M+++G
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 131/277 (47%), Gaps = 16/277 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G ++ LI G+V +A +++R + P SYNA+++ L
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM---EEMGCNPNVESYNAVINGLSK 560
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E + +M ++G P+++TY ++ R G+ ++ +M + P+ +T
Sbjct: 561 ENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYT 620
Query: 118 YNILLHVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
Y+ L++ L GK D+ M E+G +P++ ++TL+ GL R G +
Sbjct: 621 YSSLIYGLCQEGKADEA-------ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVK 673
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M +G PD Y ++ ++ E++ A +F + KG ++ Y ++I C AG
Sbjct: 674 DMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 733
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +EA + M + N + +V+ LV L G+L
Sbjct: 734 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGEL 770
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 76/170 (44%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P ++Y+ ++ L ++ E + + M + G+ PD Y ++ A + ++D +
Sbjct: 646 EPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALK 705
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ + GF Y L+ L K + A L ++M E ++ + +T L+DGL
Sbjct: 706 IFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLL 765
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ G LD C M +K P++ Y ++ G+ +++ L D +
Sbjct: 766 KEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 815
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 1 MIENGF-PTTARTFNILICTCG--EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E GF P +++LI C EV A K+ I++K F+ + Y A++ AL
Sbjct: 675 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHS-IEAK--GFQLHLSIYRALICALCK 731
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q + + ++ M ++ + D + + +++ + G+LD +LL M F+P+ T
Sbjct: 732 AGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQT 791
Query: 118 YNILLHVLGKGDKPLAALNLLNHMK 142
Y IL L + K + + L + +K
Sbjct: 792 YVILGRELSRIGKSIESEPLADKLK 816
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTF-NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G + +I+ C C + R +V F + P ++Y A++H +
Sbjct: 325 MREKGIEADVYVYTSIISCNCRSGNVKRALV-LFDEMTDKGLIPSAHTYGALIHGVCKAG 383
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q + + + +M +G + + +N ++ G +D+ RL M + G D YN
Sbjct: 384 QMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYN 443
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+ L K ++ A LL M E G P+ + FTTL+D + GN K F EM K
Sbjct: 444 SIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEK 503
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +P+++ Y V+I Y G +++A L D + +G +P+V+T S+I G C+ GK D A
Sbjct: 504 GNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMA 563
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM RG PN + Y ++S L G+ EA ++ M E G
Sbjct: 564 LKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETG 609
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 116/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++H I + + + ++++M ++G D+ Y ++ R G + + L DEM
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEM 360
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P HTY L+H + K + AA L+N M+ G D + + F TL+DG +G +
Sbjct: 361 TDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 420
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D M KG DV Y + + ++A+ L M+ +G PN ++ ++
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I +C G F EA + +EME +G PN + YN L+ G + EAH++ + +G
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRG 539
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 135/280 (48%), Gaps = 11/280 (3%)
Query: 17 ICTCGEVGLARKVVERF----IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+C G+V + RK+++ +K+ + + F Y L L G+ + + M
Sbjct: 239 LCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLD-LGGVAE------ILTLME 291
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
EG A +++TY +++ +GK+++ RL +EM G D + Y ++ +
Sbjct: 292 KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVK 351
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL L + M + G PS + L+ G+ +AG ++A + +EM KG + V + +I
Sbjct: 352 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 411
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
Y +G +++A L M KG +VF YNS+ G C + DEA ++ M RG +
Sbjct: 412 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 471
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN + + TL+ G EA V R M EKG ++++
Sbjct: 472 PNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIIT 511
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 135/275 (49%), Gaps = 14/275 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M + G +A T+ LI C G++ A+ +V ++ K + P I + L+
Sbjct: 360 MTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNE-MQGKGIDLNP------VIFNTLID 412
Query: 57 GIRQYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G + +++ + M +G D+ YN + +L + D+ LL M G SP
Sbjct: 413 GYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSP 472
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ ++ L+ + K + A + M+E G P+++ + L+DG S+ GN+
Sbjct: 473 NTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLK 532
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DE+ N+G +PDV T +I G+++ A LFD M +G +PNV TY +MI G
Sbjct: 533 DELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKD 592
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
G+ +EA + EM+ G P+ VY++LV +L +A
Sbjct: 593 GRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 76/137 (55%), Gaps = 6/137 (4%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH--- 123
V+++M ++G P+I+TYN+++ + G + + H+L DE+ G PD +T L+H
Sbjct: 496 VFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGEC 555
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ GK D AL L + M + G P+V+ +T ++ GLS+ G + +DEM G P
Sbjct: 556 IDGKVD---MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 612
Query: 184 DVVCYTVMITSYIAAGE 200
D Y+ ++ S +A E
Sbjct: 613 DDTVYSSLVGSLHSADE 629
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+ M + GF D + + L L +G + + L M + + +V T ++DGL +
Sbjct: 183 EHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKR 242
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G+++ + DE+A KG +VV Y I Y +L ++ M +G NV TY
Sbjct: 243 GDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTY 302
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+I GF GK +EA + +EM +G + VY +++S +G + A + M +
Sbjct: 303 TLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTD 362
Query: 284 KG 285
KG
Sbjct: 363 KG 364
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ M +G+ D + + + A R G++D R M ++ I+L L K
Sbjct: 182 FEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCK 241
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
L++ + G +V+ + ++G + +L M +G +VV
Sbjct: 242 RGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVT 301
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT++I + G++E+AQ LF+ M KG +V+ Y S+I C +G A + EM
Sbjct: 302 YTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMT 361
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ Y L+ + AG++ A ++ M KG
Sbjct: 362 DKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKG 399
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 37/67 (55%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M G P+++TY ++ + G+ ++ +L DEM +G +PD Y+ L+ L
Sbjct: 566 LFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLH 625
Query: 127 KGDKPLA 133
D+ ++
Sbjct: 626 SADESIS 632
Score = 38.1 bits (87), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 83/252 (32%), Gaps = 72/252 (28%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHR-----------------------------LLDEM 106
Y PD+ Y ++ YR K D+ H+ L+D+
Sbjct: 87 YKPDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASLVDDA 146
Query: 107 ------GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
R+ F F +++L V AL HM++ GF + L
Sbjct: 147 CNESKCNRAKFKEKF--FDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLAL 204
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G +D+C FF M N D +T V
Sbjct: 205 RRGGQVDSCLRFFRRMVN-----------------------------LDVEVT------V 229
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
++ ++ G C G + +M E+ ++G N + YN + L E++
Sbjct: 230 YSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTL 289
Query: 281 MVEKGKYIHLVS 292
M ++G ++V+
Sbjct: 290 MEKEGVACNVVT 301
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 150/284 (52%), Gaps = 9/284 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V A++++ R + F+P SY +L L R++ ++ ++
Sbjct: 213 TYNVIINGMCREGRVDDAKEILNRLSS---YGFQPDIVSYTTVLKGLCAARRWDDVKVLF 269
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M D+ P+ +T+++++ R G +++ ++L +M + G +P+ NI+++ + K
Sbjct: 270 AEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQ 329
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + LN+M G +P + +TT++ GL RAG + K EM K C P+ V +
Sbjct: 330 GRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTF 389
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I G +E+A L + M G + TYN+++ GFC+ G+ D A + +
Sbjct: 390 NTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP- 448
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + Y TL++ L +A +L A E++ M++K ++ V+
Sbjct: 449 --CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVT 490
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 9/284 (3%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G P +N L+ C G + AR+++ P +Y I+ L +
Sbjct: 103 SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM------PVPPDAYTYTPIIRGLCDRGR 156
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M G P ++TY +++ A + + +LDEM G +P+ TYN+
Sbjct: 157 VGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNV 216
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ + + + A +LN + GF P ++ +TT++ GL A D K F EM +K
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P+ V + +++ + G +E+A + M G PN N +I C G+ D+A
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M GCNP+ + Y T++ L AG+ A E++ MV K
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK 380
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + G D+ YN ++ R G+LD RL+ M PD +TY ++ L
Sbjct: 96 VLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLC 152
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL LL+ M + G PSV+ +T L++ + ++ DEM KGC P++V
Sbjct: 153 DRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIV 212
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+I G ++ A+++ + + + G P++ +Y ++++G C A ++D+ + EM
Sbjct: 213 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 272
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C PN + ++ LV G + A +V++ M + G
Sbjct: 273 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG 311
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 120/285 (42%), Gaps = 3/285 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN IC + GL + ++ + +YNA++H G
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVH---GFCV 433
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + ++ P+ +TY ++ +LD LL M + + T+N+
Sbjct: 434 QGRVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNV 493
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A+ L+N M E G P+++ F TL+DG+++ N + + +KG
Sbjct: 494 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 553
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D + Y+ ++ E+A + + G P V YN ++ C + D+A
Sbjct: 554 VSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 613
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC PN Y L+ L + G L EA V+ + KG
Sbjct: 614 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKG 658
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 74/148 (50%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
QM + G P+++T+N ++ + ++ LL + G S D TY+ ++ VL + D
Sbjct: 513 QMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED 572
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ +L+ ++++G P V + ++ L + D FF M + GCMP+ Y
Sbjct: 573 RTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYI 632
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQL 217
++I G L++A+ + + KG L
Sbjct: 633 ILIEGLAHEGLLKEARYVLSELYAKGVL 660
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
IA +L +A L + ++G+ P+V+ +IR C G+ +A +++ E+ G +
Sbjct: 50 IARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDV 109
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHM 281
YNTLV+ G+L A +I M
Sbjct: 110 FAYNTLVAGYCRYGRLDAARRLIASM 135
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%), Gaps = 9/135 (6%)
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
D L+ A L + +++G PDV T +I + G A + G
Sbjct: 53 DDLAEAARL------VETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAP 106
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+VF YN+++ G+C G+ D A ++ M P+ Y ++ L + G++ +A +
Sbjct: 107 VDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALAL 163
Query: 278 IRHMVEKGKYIHLVS 292
+ M+++G +V+
Sbjct: 164 LDDMLQRGCQPSVVT 178
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 129/276 (46%), Gaps = 6/276 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C C + A V+ + +K + P ++ ++LH + + +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMK---LGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M GY P+++ YN ++ + G+L+ LL+EM + G D TYN LL L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A +L M + +P V+ FT L+D + GNLD + + EM P+ V Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I G L A+ FD M +KG PNV TYN++I GFC DE + + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G N + YNTL+ GKL A ++ MV +
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLL 103
S+ ++H + V +M GY P I+T+ ++ C R+G D F L+
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIG--DAFS-LV 164
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
M +SG+ P+ YN L+ L K + AL LLN M++ G V+ + TL+ GL +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G +M + PDVV +T +I ++ G L++AQ+L+ MI PN TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS+I G CM G+ +A M S+GC PN + YNTL+S + E ++ + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 284 KG 285
+G
Sbjct: 345 EG 346
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ + TF L+ C +G A +V +KS + P YN ++ L
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS---GYEPNVVVYNTLIDGLCK 188
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M +G D++TYN ++ G+ R+L +M + +PD T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ V K A L M + DP+ + + ++++GL G L K FD MA
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC P+VV Y +I+ + +++ LF M +G ++FTYN++I G+C GK
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + M SR P+ + + L+ L G++ A M E KYI +V+
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 127/250 (50%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L A +R+Y+ + + Q+M G + D+ ++ I++ R +L +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M + G+ P T+ LLH ++ A +L+ M + G++P+V+ + TL+DGL +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L+ +EM KG DVV Y ++T +G A + M+ + P+V T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ ++I F G DEA + KEM +PN + YN++++ L G+L +A + M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 283 EKGKYIHLVS 292
KG + ++V+
Sbjct: 309 SKGCFPNVVT 318
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G + A+++ + I+S + P +YN+I++ L + + + M+ +G P++
Sbjct: 260 GNLDEAQELYKEMIQSSV---DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ + +D+ +L M GF+ D TYN L+H + K AL++
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M P ++ L+ GL G +++ FD+M +V Y +MI A +
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+EKA +LF + +G P+ TY MI G C G EA +++ M+ G
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ M ++ +PD++ Y +I G+L++A DL D M+ KG P+ TY ++I
Sbjct: 265 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 384
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 385 PDTGTYTMIINEF 397
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 135/295 (45%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM
Sbjct: 250 FTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMV 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + +++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVT 424
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P ++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ TY ++I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + +VY L+S L G+ +A +++R M+
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLN 384
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 385 PDTGTYTMIINEF 397
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSAVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D L DEM G P+ T
Sbjct: 190 LGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L D+M+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 RKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G NP+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+E+ G+ + +NIL+H K A ++ + + + G PS + + TLM+G R
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 190
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G LD M G PDV Y+V+I +++ A +LFD M+ KG +PN T+
Sbjct: 191 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTF 250
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++I G C G+ D A + K+M S+ P+ + YNTL+ L G L +AH++I M
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 310
Query: 284 KG 285
KG
Sbjct: 311 KG 312
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G T+++LI + E F + + P ++ ++ +
Sbjct: 203 MLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L +Y+QM + PD++TYN ++ + G L Q H L+D+M R G PD TY
Sbjct: 263 VDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTT 322
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K +A M + + +T L+ GL + G + EM + G
Sbjct: 323 LIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 382
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
PD YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 383 LNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F++E+ G + + +++ + G++ AQ +FD + G P+ +YN+++ G+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYI 188
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L K+ +A E+ M+ KG
Sbjct: 189 RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKG 242
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 129/276 (46%), Gaps = 6/276 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C C + A V+ + +K + P ++ ++LH + + +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMK---LGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M GY P+++ YN ++ + G+L+ LL+EM + G D TYN LL L
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A +L M + +P V+ FT L+D + GNLD + + EM P+ V Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I G L A+ FD M +KG PNV TYN++I GFC DE + + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G N + YNTL+ GKL A ++ MV +
Sbjct: 345 EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSR 380
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 113/236 (47%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F F P YN +++ L R V+ M +G D +TYN ++ G+
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
RLL +M + P+ + L+ K L A NL M P+V + +L++
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G G L KY FD M +KGC PDVV Y +IT + + +E LF M +G +
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ FTYN++I G+C AGK + A + M G +P+ + YN L+ L N GK+ +A
Sbjct: 883 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 938
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 120/242 (49%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLL 103
S+ ++H + V +M GY P I+T+ ++ C R+G D F L+
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIG--DAFS-LV 164
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
M +SG+ P+ YN L+ L K + AL LLN M++ G V+ + TL+ GL +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G +M + PDVV +T +I ++ G L++AQ+L+ MI PN TY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS+I G CM G+ +A M S+GC PN + YNTL+S + E ++ + M
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSC 344
Query: 284 KG 285
+G
Sbjct: 345 EG 346
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C C + LA ++ + +K FRP + ++L+ +++ +
Sbjct: 641 SFTILIHCFCRCSRLSLALALLGKMMK---LGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 697
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M G+ P+++ YN V+ + L+ + M + G D TYN L+ L
Sbjct: 698 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 757
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LL M + DP+V+ FT L+D + GNL + + EM + +P+V Y
Sbjct: 758 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 817
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I + G L A+ +FD M++KG P+V TYN++I GFC + + ++ + EM
Sbjct: 818 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 877
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G + YNTL+ AGKL A +V MV+ G +V+
Sbjct: 878 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 921
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ + TF L+ C +G A +V +KS + P YN ++ L
Sbjct: 132 MMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS---GYEPNVVVYNTLIDGLCK 188
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M +G D++TYN ++ G+ R+L +M + +PD T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ V K A L M + DP+ + + ++++GL G L K FD MA
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC P+VV Y +I+ + +++ LF M +G ++FTYN++I G+C GK
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + M SR P+ + + L+ L G++ A M E KYI +V+
Sbjct: 369 VALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVA 423
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 127/250 (50%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L A +R+Y+ + + Q+M G + D+ ++ I++ R +L +
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M + G+ P T+ LLH ++ A +L+ M + G++P+V+ + TL+DGL +
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L+ +EM KG DVV Y ++T +G A + M+ + P+V T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ ++I F G DEA + KEM +PN + YN++++ L G+L +A + M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 283 EKGKYIHLVS 292
KG + ++V+
Sbjct: 309 SKGCFPNVVT 318
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 18/294 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVG-------LARKVVERFIKSKLFNFRPFKNSYNAILH 53
M + G A T+N LI G L R +V+R I + F +++
Sbjct: 735 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF----- 789
Query: 54 ALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+++ L+E +Y++M P++ TYN ++ G L + D M G
Sbjct: 790 ----VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 845
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD TYN L+ K + + L M G + TL+ G +AG L+ +
Sbjct: 846 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 905
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F+ M + G PD+V Y +++ G++EKA + + + ++ TYN +I+G C
Sbjct: 906 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K EA + + + +G P+ + Y T++S L G EA ++ R M E G
Sbjct: 966 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 8/271 (2%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + + +L + + ++ ++ ++Y +M + G + D+ ++ I++ R
Sbjct: 594 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 653
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+L LL +M + GF P T LL+ +G++ A++L++ M GF P+V+ +
Sbjct: 654 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 713
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
T+++GL + +L+ F M KG D V Y +I+ +G A L M+ +
Sbjct: 714 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 773
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PNV + ++I F G EA + KEM R PN YN+L++ G L +A
Sbjct: 774 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 833
Query: 275 HEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ MV KG Y L++ F + KR
Sbjct: 834 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L ++++ R + +F + N + +H LG +Y ++ M +G PD++TYN
Sbjct: 801 LYKEMIRRSVVPNVFTYNSLINGF--CIHGCLGDAKY-----MFDLMVSKGCFPDVVTYN 853
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ + +++ +L EM G D TYN L+H + K A + N M +
Sbjct: 854 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 913
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P ++ + L+D L G ++ +++ D++ Y ++I +L++A
Sbjct: 914 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 973
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
LF + KG P+ Y +MI G C G EA + + M+ G P+ +Y+
Sbjct: 974 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G + A+++ + I+S + P +YN+I++ L + + + M+ +G P++
Sbjct: 260 GNLDEAQELYKEMIQSSV---DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNV 316
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ + +D+ +L M GF+ D TYN L+H + K AL++
Sbjct: 317 VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCW 376
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M P ++ L+ GL G +++ FD+M +V Y +MI A +
Sbjct: 377 MVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADK 436
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+EKA +LF + +G P+ TY MI G C G EA +++ M+ G
Sbjct: 437 VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 6/231 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI T+N LI C G +G A+ + + + F P +YN ++
Sbjct: 805 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF---PDVVTYNTLITGFCK 861
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M+ +G D TYN ++ + GKL+ ++ + M G SPD T
Sbjct: 862 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 921
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNILL L K AL ++ +++ D ++ + ++ GL R L F +
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 981
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
KG PD + Y MI+ G +A L M G +P+ Y+ +R
Sbjct: 982 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 1032
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K D L EM +S P + +L V+ K +K + L + M+ +G + FT
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L+ R L +M G P +V ++ + ++A L D M
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +PNV YN++I G C + A + ME +G + + YNTL+S L N+G+ +A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763
Query: 275 HEVIRHMVEK 284
++R MV++
Sbjct: 764 ARLLRDMVKR 773
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 132/250 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N +L ++ +QY + + QM G PD+ T NI++ + L +L +
Sbjct: 67 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M GF P+V+ + TL++GL +
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN +A M C PDVV YT +I S ++ +A +LF M+ +G P++FT
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S+I C ++ T++ +M + P+ ++++T+V L GK+ EAH+V+ M+
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306
Query: 283 EKGKYIHLVS 292
+G ++V+
Sbjct: 307 IRGVEPNVVT 316
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 4/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ A VV+ I + P +YNA++ + V+ M GY
Sbjct: 289 LCKEGKITEAHDVVDMMI---IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 345
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP++++YN ++ ++ ++D+ L +EM + P+ TYN L+H G + A+
Sbjct: 346 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVG-RLQDAIA 404
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P + + L+D L + +LD + PD+ YT++I
Sbjct: 405 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 464
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+D+F + +KG PNV TY MI G C G DEA + EM+ GC+P+
Sbjct: 465 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 524
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+ L + A ++++ M+ +G
Sbjct: 525 TYNTITQGLLQNKEALRAIQLLQEMLARG 553
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 132/283 (46%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T NILI C +G A V+ + +K +P ++ ++ L +
Sbjct: 99 GIPPDVYTLNILINSFCHLNRLGFAFSVLAKILK---LGHQPDTATFTTLIRGLCVEGKI 155
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M EG+ P+++TY ++ ++G + RLL M + PD Y +
Sbjct: 156 GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSI 215
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A NL + M G P + +T+L+ L ++M N
Sbjct: 216 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 275
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPDVV ++ ++ + G++ +A D+ D MI +G PNV TYN+++ G C+ + DEA
Sbjct: 276 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 335
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M G PN + YNTL++ ++ +A + M +K
Sbjct: 336 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 378
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 128/279 (45%), Gaps = 1/279 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI GF T+ LI +VG + + N +P Y +I+ +L RQ
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 224
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M +G +PDI TY ++ + L + LL++M S PD ++
Sbjct: 225 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 284
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A ++++ M G +P+V+ + LMDG +D FD M + G
Sbjct: 285 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 344
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V+ Y +I Y ++KA LF+ M K +PN TYN+++ C G+ +A
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAI 403
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM + G P+ Y L+ L L EA +++
Sbjct: 404 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK 442
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 7/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+N L+ C E+ A KV + + + + P SYN +++
Sbjct: 305 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN---GYAPNVISYNTLINGYCK 361
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ +++++M + P+ +TYN +M +G+L L EM G PD T
Sbjct: 362 IQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQIPDLAT 420
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ LL ++ DP + +T ++DG+ RAG L+A + F ++
Sbjct: 421 YRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 480
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+V YT+MI G L++A LF M G P+ TYN++ +G +
Sbjct: 481 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 540
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
A +++EM +RG + + LV L
Sbjct: 541 RAIQLLQEMLARGFSADVSTTTLLVEML 568
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 107/242 (44%), Gaps = 8/242 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ NG+ ++N LI C + A + E + +L P +YN ++H
Sbjct: 340 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI---PNTVTYNTLMHXCHV 396
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R I ++ +M G PD+ TY I++ + LD+ LL + S PD
Sbjct: 397 GRLQDAIA-LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 455
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I++ + + + AA ++ +++ G P+V +T +++GL R G LD F EM
Sbjct: 456 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 515
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC PD Y + + E +A L M+ +G +V T ++ C K D
Sbjct: 516 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLD 574
Query: 238 EA 239
++
Sbjct: 575 QS 576
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
FH+ ++ + L D L++ N + HM PS + F L+ +++ +
Sbjct: 40 FHSKSLNFNTL---DDALSSFNRMLHMHP---PPSTVDFNRLLTSIAKTKQYPTVFSLSN 93
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G PDV ++I S+ L A + ++ G P+ T+ ++IRG C+ G
Sbjct: 94 QMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEG 153
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K +A + +M G PN + Y TL++ L G A ++R M E+G
Sbjct: 154 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM-EQG 203
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 139/294 (47%), Gaps = 9/294 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSK-----LFNFRPFKNSYNAIL 52
M+E TF ILI C V A +V+E+ K + P YN ++
Sbjct: 331 MVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLI 390
Query: 53 HALLGI-RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
L + RQ + + + + S +G APD +TYN ++ + G++++ L DEM + G
Sbjct: 391 DGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGV 450
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+P+ T N L+ + + + +A+N + G + +T L++ N +
Sbjct: 451 APNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAME 510
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F+EM GC PD + Y +I+ + AG + A + + G P+ YN++I GFC
Sbjct: 511 LFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFC 570
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
KF M+KEME G P+ + YNTL++ G L A +V+R M++ G
Sbjct: 571 RTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 126/284 (44%), Gaps = 1/284 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T N L+ G V F++++ + +Y A+++A +
Sbjct: 445 MNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNN 504
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ ++ +M G +PD + Y ++ + G++ +L E+ + G PD YN
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT 564
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + +K +L M+E G P + + TL+ S+ G+L + +M G
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAG 624
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEA 239
+P V Y +I +Y G +A ++F M ++ PN YN +I C K A
Sbjct: 625 VVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSA 684
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++M++M+ G PN YN + LR+ L + E + M+E
Sbjct: 685 VSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 129/308 (41%), Gaps = 41/308 (13%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI C G ++ER K P +YN ++ + + + ++
Sbjct: 386 YNTLIDGLCKVGRQQEGLGLMERMRSQK--GCAPDTITYNCLIDGFCKAGEIEKGKELFD 443
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M+ EG AP+++T N ++ R G++ E R G D TY L++ +
Sbjct: 444 EMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVN 503
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A+ L N M + G P + + TL+ G S+AG + + E+ G PD VCY
Sbjct: 504 NFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYN 563
Query: 190 VMITSYIAA-----------------------------------GELEKAQDLFDGMITK 214
+I + G+L+ AQ + MI
Sbjct: 564 TLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKA 623
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFLVYNTLVSNLRNAGKLAE 273
G +P V TY ++I +C+ G +EA + K+M++ PN ++YN L+++L K+
Sbjct: 624 GVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKS 683
Query: 274 AHEVIRHM 281
A ++ M
Sbjct: 684 AVSLMEDM 691
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 98/248 (39%), Gaps = 40/248 (16%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKL--FNFRPFKNSYNAILHALLGI 58
M+++G A + LI + G R F+ ++L RP YN ++
Sbjct: 515 MLKSGCSPDAIVYYTLISGFSQAG--RMADASFVLAELKKLGIRPDTVCYNTLIGGFCRT 572
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++ + + ++M + G PD +TYN ++ + G L +++ +M ++G P TY
Sbjct: 573 NKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATY 632
Query: 119 ------------------------------------NILLHVLGKGDKPLAALNLLNHMK 142
NIL++ L K +K +A++L+ MK
Sbjct: 633 GAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMK 692
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P+ + + GL +L+ F D M C PD + ++ A GE+E
Sbjct: 693 IWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752
Query: 203 KAQDLFDG 210
+ + G
Sbjct: 753 RLKKFVAG 760
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 89/216 (41%), Gaps = 18/216 (8%)
Query: 84 NIVMCAKYRLGKLDQFHRLLDEM----GRSGFSPDFHTYNILLHVLGKGDKPLAAL---- 135
N+ + R G++ +++DEM S P+ T +IL L K ++ L
Sbjct: 194 NVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDE 253
Query: 136 --NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
NL+ E G S L+ L R + F EM G + + ++T
Sbjct: 254 IVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLT 313
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM----ESR 249
G + +L + M+ PNV T+ +I C + D+A ++++M ES
Sbjct: 314 GLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESG 373
Query: 250 GCN----PNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G + P+ ++YNTL+ L G+ E ++ M
Sbjct: 374 GISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERM 409
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 67 VYQQMSDEGYAPDILTYNI---VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ M + G D+ ++N V+C R+ K + R L R FS D TYN++L+
Sbjct: 148 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL----RGRFSVDTVTYNVILN 203
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ AL +L M E G +P++ + T++ G RAG + FF EM + C
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV YT ++ + AGE+++A+++FD MI +G LP+V TYN+MI+ C + A M
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM RG PN YN L+ L +AG+ + E+++ M +G
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+ +TF I+ G K V+ F+ S+N IL L ++ + ++
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ + ++ D +TYN+++ + + + +L EM G +P+ TYN +L +
Sbjct: 185 RALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A MK+ + V+ +TT++ G AG + + FDEM +G +P V Y
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
MI +E A +F+ M+ +G PNV TYN +IRG AG+F +M+ ME+
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 249 RGCNPNFLVYNTLV 262
GC PNF YN ++
Sbjct: 364 EGCEPNFQTYNMMI 377
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 118/242 (48%), Gaps = 3/242 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN IL+ I++ V ++M + G P++ TYN ++ +R G++ EM
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ D TY ++H G + A N+ + M G PSV + ++ L + N+
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F+EM +G P+V Y V+I AGE + ++L M +G PN TYN M
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL---RNAGKLAEAHEVIRHMVE 283
IR + + ++A + ++M S C PN YN L+S + + + + A +++ MVE
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVE 436
Query: 284 KG 285
+G
Sbjct: 437 RG 438
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y D ++++ + RL L+ M P T+ I+ KP A+
Sbjct: 87 YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAV 146
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L +M E G + F T++D L ++ ++ F + + + D V Y V++ +
Sbjct: 147 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGW 205
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
KA ++ M+ +G PN+ TYN+M++GF AG+ A EM+ R C +
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T+V AG++ A V M+ +G
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
QF LD R + D ++++ + + + +L++ M+ + PS F +
Sbjct: 75 QFFHFLDNHHRE-YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVA 133
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ + AG D F M GC D+ + ++ + +EKA +LF + + +
Sbjct: 134 ERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV 193
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
V TYN ++ G+C+ + +A ++KEM RG NPN YNT++ AG++ A E
Sbjct: 194 DTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252
Query: 278 IRHMVEKGKYIHLVS 292
M ++ I +V+
Sbjct: 253 FLEMKKRDCEIDVVT 267
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + T+N +I C V A + E ++ + P +YN ++ L
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRR---GYEPNVTTYNVLIRGLFH 347
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E + Q+M +EG P+ TYN+++ ++++ L ++MG P+ T
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDT 407
Query: 118 YNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
YNIL+ V + + + A LL M E GF P F +++GL GN
Sbjct: 408 YNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTGN 458
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 141/293 (48%), Gaps = 6/293 (2%)
Query: 3 ENGFPTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
E PT A +++ C G++G A ++E K ++ +YN ++H +++
Sbjct: 251 EMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDM---KRKGYQGDNLTYNTLIHGHCRLQE 307
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYN 119
+ ++M + PDI TY+I++ R +L + LL + +P+ +YN
Sbjct: 308 IDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYN 367
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K + A L M G P V+ ++TL+ GL AG + +EM K
Sbjct: 368 TLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGK 427
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+P V Y+ +I+ AGEL+ A +FD M+ G PN+ YNS+I G C G+ +A
Sbjct: 428 KILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDA 487
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+KEM RGC+P+ + Y TL+ L + EA ++ +E+G I S
Sbjct: 488 KLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETS 540
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 143/285 (50%), Gaps = 15/285 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ ILI C G++ LA + E + L RP + +L+AL +L +
Sbjct: 127 TYGILIRGLCNFGKLKLACSLYEEMVDRGL---RPVVLTCKFLLNALCKSGNLELALRYF 183
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++MS P T+ I++ +R ++D+ +EM + P+ TY ++++ L K
Sbjct: 184 EKMSS---IPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKA 239
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A +L M P++ ++T+++ G +AG++ + ++M KG D + Y
Sbjct: 240 GKVAEAERVLQEMPV----PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTY 295
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I + E+++A +L + M + +P++FTY+ +I G C A + EA ++ + +
Sbjct: 296 NTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRN 355
Query: 249 RG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + YNTL+ A ++ +A+++ MV G++ +V+
Sbjct: 356 EDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVT 400
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 132/289 (45%), Gaps = 10/289 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T+N LI C E+ A +++E K +F P +Y+ ++ L
Sbjct: 283 MKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM---KSNDFVPDIFTYDILIAGLCR 339
Query: 58 IRQYKLIEWVYQQMSDEG-YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
++ + + +E P++++YN ++ + +++ ++L EM +G PD
Sbjct: 340 AKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVV 399
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+ L+ L + A + L M P V +++++ GL RAG LDA FD M
Sbjct: 400 TYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSM 459
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P++ Y +I G L A+ M +G P+ TY ++I G C +
Sbjct: 460 VANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRT 519
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
DEAC + +G + N ++++LR L +A V+R ++ G
Sbjct: 520 DEACDLYVRSLEQGIEISETSCNVVIASLRC---LEQAQRVLRVVLATG 565
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 117/242 (48%), Gaps = 8/242 (3%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+FR ++YN AL+ Q + ++++ + PD +TY I++ GKL
Sbjct: 85 DFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLA 144
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L +EM G P T LL+ L K AL M + P +T L+DG
Sbjct: 145 CSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSI---PCAATWTILIDG 201
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L RA +D Y+F+EM + +P+ YTV+I + AG++ +A+ + M +P
Sbjct: 202 LFRAIRVDEACYYFEEMKHTA-IPNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPT 256
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ Y S+I G C AG +A ++++M+ +G + L YNTL+ ++ A+E++
Sbjct: 257 LANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLE 316
Query: 280 HM 281
M
Sbjct: 317 EM 318
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 128/287 (44%), Gaps = 14/287 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLAR-----KVVERFIKSKLFNFRPFKNSYNAILHAL 55
M E G T+ LI VGL R + + +++S + S N ++ +L
Sbjct: 494 MTERGCSPDGVTYGTLI-----VGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASL 548
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ Q + V + + G +P Y V+ + + L + +LL++M +G PD
Sbjct: 549 RCLEQ---AQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDG 605
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T + L+ + + DK + A+ L M +G PSV ++TL++ L +AG
Sbjct: 606 STVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRR 665
Query: 176 M-ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+ ++ C PD + Y +I +Y ++E+A+++ + +K + ++ YN++++G
Sbjct: 666 LISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTR 725
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+++EM+ N +N L+ G+ A V+ M
Sbjct: 726 NLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 9/285 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T++ LI C G A +E + K+ P Y++++ L
Sbjct: 389 MVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPV---YSSVISGLCR 445
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V+ M G P++ YN ++ + G+L + EM G SPD T
Sbjct: 446 AGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVT 505
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + A +L E G + S ++ L L+ + +
Sbjct: 506 YGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLR---CLEQAQRVLRVVL 562
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P Y +I S L +A+ L + MI G P+ T ++++ C K
Sbjct: 563 ATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAV 622
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
A ++EM G P+ Y+TL++ L AGK +EAH V+R ++
Sbjct: 623 VAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLI 667
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ L+ C GE A K++ R I+ + + RP Y+ I+ G
Sbjct: 161 VVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLL-RMIEDR--STRPDVVMYSTIID---G 214
Query: 58 IRQYKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + K++ Y +M+ G P+++TY+ ++ G+L LL+EM +P+
Sbjct: 215 LCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPN 274
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TYNIL+ L K K A LL M G V+ + +++DGL ++ NLD F
Sbjct: 275 VYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFM 334
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M G P+ YT +I G L+ AQ LF ++ KG +V TYN MI G C G
Sbjct: 335 KMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEG 394
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
FD+A M +ME GC PN + ++ ++ +L + +A +++ M+ KG
Sbjct: 395 MFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKG 445
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 131/263 (49%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
V +F + L P + IL L+ ++ Y + +QM +G P+++T NI++
Sbjct: 50 VSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINC 109
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
LG++ +L ++ + G+ PD T N L+ L + +L+ + + GF +
Sbjct: 110 FCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMN 169
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + TL++GL + G + ++ PDVV Y+ +I + +A D F
Sbjct: 170 QVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFS 229
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M +G PNV TY+++I GFC+AG+ A +++ EM + NPN YN L+ L G
Sbjct: 230 EMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEG 289
Query: 270 KLAEAHEVIRHMVEKGKYIHLVS 292
K+ EA +++ M KG+ +V+
Sbjct: 290 KVKEAKKLLAEMHHKGQPADVVT 312
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 6/214 (2%)
Query: 75 GYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
GY PD +T N +M C K + + FH D++ GF + +Y LL+ L K +
Sbjct: 130 GYQPDTITLNTLMKGLCLKGEVKRSLHFH---DKVVAQGFQMNQVSYGTLLNGLCKIGET 186
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ LL +++ P V+ ++T++DGL + ++ FF EM +G P+V+ Y+ +
Sbjct: 187 RCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTL 246
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + AG+L A L + MI K PNV+TYN +I C GK EA ++ EM +G
Sbjct: 247 IWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQ 306
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YN+++ L + L +A + M + G
Sbjct: 307 PADVVTYNSVLDGLCKSQNLDKATALFMKMKKWG 340
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 133/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T NILI C G++ + V+ + +K ++P + N ++ L +
Sbjct: 95 GIEPNLVTLNILINCFCHLGQMAFSFSVLGKILK---LGYQPDTITLNTLMKGLCLKGEV 151
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K + ++ +G+ + ++Y ++ ++G+ +LL + PD Y+ +
Sbjct: 152 KRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTI 211
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A + + M G P+V+ ++TL+ G AG L +EM K
Sbjct: 212 IDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNI 271
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+V Y ++I + G++++A+ L M KGQ +V TYNS++ G C + D+A
Sbjct: 272 NPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATA 331
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M+ G PN Y L+ L G+L A ++ +H++ KG
Sbjct: 332 LFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKG 375
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 7/215 (3%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T++ LI C G++ A ++ I L N P +YN ++ AL + K
Sbjct: 237 FPNVI-TYSTLIWGFCLAGQLMGAFSLLNEMI---LKNINPNVYTYNILIDALCKEGKVK 292
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + +M +G D++TYN V+ + LD+ L +M + G P+ +TY L+
Sbjct: 293 EAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALI 352
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L KG + A L H+ G V + ++ GL + G D +M + GC+
Sbjct: 353 DGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCI 412
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
P+ V + ++I S E +KA+ L GMI KG L
Sbjct: 413 PNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 167/369 (45%), Gaps = 77/369 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E +P+ + FN L+ CT G+ A K++++ +K P YN ++ ++ G
Sbjct: 364 MMEGCYPS-PKIFNSLVHAYCTSGDHSYAYKLLKKMVKC---GHTPGYVVYNILIGSICG 419
Query: 58 IRQ------YKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+ +L E Y +M G ++ ++ +C+ GK ++ ++ EM
Sbjct: 420 DKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSA---GKYEKAFSVIREMIG 476
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
GF PD TY+ +L L K A L MK G V +T ++D +AG ++
Sbjct: 477 QGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ +F+EM GC P+VV YT +I +Y+ A ++ A +LF+ M+++G LPN+ TY+++I
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 229 GFCMAGKFDEACTMMKEM------------------------------------------ 246
G C AG+ ++AC + + M
Sbjct: 597 GHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRV 656
Query: 247 -ESR---------GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHL 290
E+R GC PN +VY+ L+ L GKL EA EV M E G Y L
Sbjct: 657 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSL 716
Query: 291 VSKFKRYKR 299
+ ++ + KR
Sbjct: 717 IDRYFKVKR 725
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 132/302 (43%), Gaps = 17/302 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+ I++ + + GL + + F + + P +Y A++HA L ++
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKK 568
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH---- 116
+++ M EG P+I+TY+ ++ + G++++ ++ + M S PD
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFK 628
Query: 117 -------------TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
Y LL K + A LL+ M G +P+ + + L+DGL +
Sbjct: 629 QYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKV 688
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G LD + EM+ G + Y+ +I Y + A + M+ PNV Y
Sbjct: 689 GKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIY 748
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
MI G C GK DEA +M+ ME +GC PN + Y ++ GK+ E++ M
Sbjct: 749 TEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGS 808
Query: 284 KG 285
KG
Sbjct: 809 KG 810
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 121/264 (45%), Gaps = 17/264 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLF--------------NFRP 43
M+ G T++ LI C G++ A ++ ER SK + RP
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERP 638
Query: 44 FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
Y A+L + + + + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 639 NVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 698
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
EM GF +TY+ L+ K + A +L+ M E P+V+ +T ++DGL +
Sbjct: 699 AEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 758
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G D M KGC P+VV YT MI + G++E +L + M +KG PN TY
Sbjct: 759 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTY 818
Query: 224 NSMIRGFCMAGKFDEACTMMKEME 247
+I C G D A +++EM+
Sbjct: 819 RVLIDHCCKNGALDVAHNLLEEMK 842
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 13/290 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GFP T T++ LI +V LA KV+ + +++ + P Y ++ L
Sbjct: 701 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN---SCAPNVVIYTEMIDGLCK 757
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + Q M ++G P+++TY ++ R+GK++ LL+ MG G +P++ T
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ K A NLL MK+ + + +++G ++ DE+
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNK--EFIESLGLLDEIG 875
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT--KGQLPNVFTYNSMIRGFCMAGK 235
P + Y +++ + I A LE A L + + T + TYNS+I C+A K
Sbjct: 876 QDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANK 935
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA---HEVIRHMV 282
D+A + EM +G P + +L+ L K++EA + I HMV
Sbjct: 936 VDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMV 985
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 17/283 (6%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
N+L+ C G +A +E + K F FRP +++YN ++ A L V++
Sbjct: 203 LNVLVRKYCRSGSFSIA---LEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHR 259
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+MS D T + C Y L K+ ++ L M F PD Y L+ L +
Sbjct: 260 EMSLANLRMDGFT---LRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEAS 316
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A++ LN M+ P+V+ ++TL+ G L CK + M +GC P +
Sbjct: 317 LFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFN 376
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK----- 244
++ +Y +G+ A L M+ G P YN +I C K +C +++
Sbjct: 377 SLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSIC-GDKDSLSCHLLELAEKA 435
Query: 245 --EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + G N + ++ L +AGK +A VIR M+ +G
Sbjct: 436 YSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG 478
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 9/297 (3%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN P T + LI E L + ++ + + + P +Y+ +L L +Q
Sbjct: 296 ENFVPDTV-FYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V M EG P +N ++ A G ++LL +M + G +P + YNIL+
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILI 414
Query: 123 HVLGKGDKPLAALNLL-------NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ GDK + +LL + M G + ++ ++ L AG + E
Sbjct: 415 GSIC-GDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +G +PD Y+ ++ A ++E A LF+ M G + +V+TY M+ FC AG
Sbjct: 474 MIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++A EM GC PN + Y L+ A K++ A+E+ M+ +G ++V+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVT 590
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 129/305 (42%), Gaps = 42/305 (13%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C V ARK+++ + P + Y+A++ L + + + V +MS+ G+
Sbjct: 651 CKLHRVEEARKLLDAM---SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFP 707
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ TY+ ++ +++ + D ++L +M + +P+ Y ++ L K K A L
Sbjct: 708 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 767
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M+E G P+V+ +T ++DG R G ++ C + M +KG P+ V Y V+I
Sbjct: 768 MQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCK 827
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP---- 253
G L+ A +L + M + Y +I GF +F E+ ++ E+ P
Sbjct: 828 NGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSL 885
Query: 254 -NFLV--------------------------------YNTLVSNLRNAGKLAEAHEVIRH 280
LV YN+L+ +L A K+ +A +
Sbjct: 886 YRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSE 945
Query: 281 MVEKG 285
M +KG
Sbjct: 946 MSKKG 950
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 3/169 (1%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+L+ + AL L +K+ F PS + L+ +A LD+ EM+
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
D S G+ +A L M T+ +P+ Y +I G C A F+E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLCEASLFEE 320
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
A + M + C PN + Y+TL+ N +L V+ M+ +G Y
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 147/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIK 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + ++D+ + L EM +G P+ T
Sbjct: 184 LGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+++ M GF P V+ + TL+ GL + G+L +Y DEM+
Sbjct: 244 FTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A +L + MI + + Y ++I G C G+
Sbjct: 304 RKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM G P+ Y +++ G + +A E++R M G+ +V+
Sbjct: 364 DAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 2/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ LI E G R +E F +K +FR PF N + H L+ + +KL+ Y+++
Sbjct: 69 FSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEH-LMKXKYFKLVWGFYKEI 127
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ GY + +NI+M + G++ + D + + G P ++N L++ K
Sbjct: 128 LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDL 187
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L N M+ G P V ++ L++GL + +D F EM + G +P+ V +T +
Sbjct: 188 DEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTL 247
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + G L+ A D++ M+ +G P+V TYN++I G C G +A ++ EM +G
Sbjct: 248 IDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGL 307
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL+ G L A E+ M+++
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFELRERMIKE 340
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T N LI R V + P + ++ ++ +
Sbjct: 186 MTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGS 245
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V +M + G +P +T N+++ ++G+++ + + GF PD TYN
Sbjct: 246 IEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNT 305
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+H L + AL +++ M + G DP V + T+++ LS+ G LD K ++M ++G
Sbjct: 306 FVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+PD + +I + + LE+A DL + KG P+V+T+N +I C G
Sbjct: 366 CLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGI 425
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM+S GC P+ + YN L+ +L + GKL A ++++ M G
Sbjct: 426 RLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I +GF T+N + C G V A KV++ ++ P +YN +++ L
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQE---GHDPDVFTYNTVINCLSKN 348
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + QM D G PD T+N ++ A +L++ L E+ G SPD +T+
Sbjct: 349 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTF 408
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL++ L K P + L MK G P + + L+D L G L EM +
Sbjct: 409 NILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES 468
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC V Y +I + +E+A+++FD M G + T+N++I G C A + D+
Sbjct: 469 NGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDD 528
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++++M G P+ + YN+++++ G L +A +++ M G I +V+
Sbjct: 529 ATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVT 582
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 1 MIENGFPTTARTFNILICT-CGE------VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++ G TFN LI C + + LAR++ + + ++ F N+ +
Sbjct: 361 MVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 420
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
LGIR ++++M G APD +TYNI++ +GKL LL EM +G
Sbjct: 421 PHLGIR-------LFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPR 473
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN ++ L K + A + + M G S + F TL+DGL +A +D
Sbjct: 474 STVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELI 533
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M +G P + Y ++T Y G+L+KA D+ + M G +V TY ++I G C A
Sbjct: 534 EQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKA 593
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G+ A +++ M +G P YN ++ +L L +A + R M E G+
Sbjct: 594 GRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGE 646
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 123/239 (51%), Gaps = 2/239 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN +L+ L + KL+E VY +M+D G PD++T N ++ A R ++ +L+EM
Sbjct: 163 YNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL- 166
+PD T+ L+ + AAL + M E G P+ + L++G + G +
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DA Y E+A+ G PD V Y + G + A + D M+ +G P+VFTYN++
Sbjct: 283 DALGYIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTV 341
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+ DEA ++ +M RGC P+ +NTL+ L + +L EA ++ R + KG
Sbjct: 342 INCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKG 400
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 97/222 (43%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ V Q++ G D YN ++ ++ + +EM G PD T N L+
Sbjct: 144 VDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIK 203
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + + A+ +L M P FTTLM G G+++A +M GC P
Sbjct: 204 ALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSP 263
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
V V+I Y G +E A I G P+ TYN+ + C G A +M
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M G +P+ YNT+++ L G+L EA ++ MV++G
Sbjct: 324 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG 365
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 129/293 (44%), Gaps = 11/293 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALL 56
M +G T+NILI C+ G++ A +K N P +YN I+ AL
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALD----LLKEMESNGCPRSTVTYNTIIDALC 486
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + E V+ QM G + +T+N ++ + ++D L+++M + G P
Sbjct: 487 KQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNI 546
Query: 117 TYN-ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN IL H +GD AA ++L M GF+ V+ + TL++GL +AG
Sbjct: 547 TYNSILTHYCKQGDLKKAA-DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRG 605
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM-AG 234
M KG P Y +I S L A LF M G+ P+ TY + RG C G
Sbjct: 606 MRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGG 665
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
EA + EM ++G P F + L L N G I ++EK K+
Sbjct: 666 PIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIEKAKF 718
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+F P + Y I+ L + L+E + ++M EG+ + + RL + D
Sbjct: 84 DFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRRFDDA 143
Query: 100 HRLL-DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L+ +++ G D YN LL+VL +G + ++ N M + G P V+ TL+
Sbjct: 144 VDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIK 203
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L RA + +EM++ PD +T ++ +I G +E A + M+ G P
Sbjct: 204 ALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSP 263
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
T N +I G+C G+ ++A +++ + G P+ + YNT V L G ++ A +V+
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323
Query: 279 RHMVEKG 285
M+++G
Sbjct: 324 DLMLQEG 330
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ R F+P Y ++ LG L+ M+ G + + ++ +R
Sbjct: 80 LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRR 139
Query: 166 LD-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D A +++ G D Y ++ ++ + +++ M +G P+V T N
Sbjct: 140 FDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLN 199
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I+ C A + A M++EM S P+ + TL+ G + A V M+E
Sbjct: 200 TLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMET 259
Query: 285 G 285
G
Sbjct: 260 G 260
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 139/284 (48%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +++ C G+ LA ++ + + KL P YN I+ L
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL---EPGVLIYNTIIDGLCK 63
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G P+++TY+ ++ G+ RLL +M +PD T
Sbjct: 64 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K K + A L + M + DPS++ +++L++G LD K F+ M
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PDVV Y +I + +E+ ++F M +G + N TYN +I+G AG D
Sbjct: 184 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 243
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + KEM S G PN + YNTL+ L GKL +A V ++
Sbjct: 244 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 287
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 113/217 (52%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G PD++TY +V+ + G D LL++M + P YN ++ L K
Sbjct: 5 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 64
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
ALNL M+ G P+V+ +++L+ L G +M + PDV +
Sbjct: 65 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 124
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I +++ G+L +A+ L+D M+ + P++ TY+S+I GFCM + DEA M + M S
Sbjct: 125 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 184
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C P+ + YNTL+ ++ E EV R M ++G
Sbjct: 185 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 221
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 116/244 (47%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +Y +++ L L + +M P +L YN ++ + +D
Sbjct: 13 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 72
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L EM G P+ TY+ L+ L + A LL+ M E +P V F+ L+D
Sbjct: 73 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 132
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G L + +DEM + P +V Y+ +I + L++A+ +F+ M++K P+V
Sbjct: 133 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVV 192
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN++I+GFC + +E + +EM RG N + YN L+ L AG A E+ + M
Sbjct: 193 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 252
Query: 282 VEKG 285
V G
Sbjct: 253 VSDG 256
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + +K + P +Y+++++
Sbjct: 112 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI---DPSIVTYSSLINGFCM 168
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + PD++TYN ++ + ++++ + EM + G + T
Sbjct: 169 HDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT 228
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L + A + M G P+++ + TL+DGL + G L+ F+ +
Sbjct: 229 YNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 288
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P + Y +MI AG++E DLF + KG P+V YN+MI GFC G +
Sbjct: 289 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKE 348
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + KEM+ G PN YNTL+ + LR+ + A A E+I+ M
Sbjct: 349 EADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA-ELIKEM 392
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 135/283 (47%), Gaps = 9/283 (3%)
Query: 7 PTTARTFNILICTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P +++ C C G A +++ I+ K+ P +++A++ A +++ KL+
Sbjct: 84 PNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI---NPDVFTFSALIDAF--VKEGKLV 138
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E +Y +M P I+TY+ ++ +LD+ ++ + M PD TYN L+
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 198
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + + + M + G + + + L+ GL +AG+ D + F EM + G
Sbjct: 199 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 258
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+++ Y ++ G+LEKA +F+ + P ++TYN MI G C AGK ++ +
Sbjct: 259 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 318
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +G P+ + YNT++S G EA + + M E G
Sbjct: 319 FCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 361
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 13/280 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ + T++ LI C + A+++ E + F P +YN ++ G
Sbjct: 147 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF---PDVVTYNTLIK---G 200
Query: 58 IRQYKLIEW---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+YK +E V+++MS G + +TYNI++ ++ G D + EM G P+
Sbjct: 201 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN LL L K K A+ + +++ +P++ + +++G+ +AG ++ F
Sbjct: 261 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 320
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ KG PDVV Y MI+ + G E+A LF M G LPN YN++IR G
Sbjct: 321 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 380
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ + ++KEM S G + LV+N+ + G+L ++
Sbjct: 381 DREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS 419
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 61/131 (46%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T T+NI+I + G + F L +P +YN ++ + + ++
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M ++G P+ YN ++ A+ R G + L+ EM GF+ D T ++ ++L G
Sbjct: 355 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDG 414
Query: 129 DKPLAALNLLN 139
+ L++L+
Sbjct: 415 RLDKSFLDMLS 425
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 67 VYQQMSDEGYAPDILTYNI---VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ M + G D+ ++N V+C R+ K + R L R FS D TYN++L+
Sbjct: 148 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL----RGRFSVDTVTYNVILN 203
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ AL +L M E G +P++ + T++ G RAG + FF EM + C
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV YT ++ + AGE+++A+++FD MI +G LP+V TYN+MI+ C + A M
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM RG PN YN L+ L +AG+ + E+++ M +G
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+ +TF I+ G K V+ F+ S+N IL L ++ + ++
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ + ++ D +TYN+++ + + + +L EM G +P+ TYN +L +
Sbjct: 185 RALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A MK+ + V+ +TT++ G AG + + FDEM +G +P V Y
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
MI +E A +F+ M+ +G PNV TYN +IRG AG+F +M+ ME+
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 249 RGCNPNFLVYNTLV 262
GC PNF YN ++
Sbjct: 364 EGCEPNFQTYNMMI 377
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 11/258 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN IL+ I++ V ++M + G P++ TYN ++ +R G++ EM
Sbjct: 197 TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ D TY ++H G + A N+ + M G PSV + ++ L + N+
Sbjct: 257 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 316
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F+EM +G P+V Y V+I AGE + ++L M +G PN TYN M
Sbjct: 317 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 376
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS---------NLRNAGKLAEAHEV 277
IR + + ++A + ++M S C PN YN L+S ++ AG A A E+
Sbjct: 377 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEI 436
Query: 278 IRHMVEKGKYIHLVSKFK 295
+R + G L+ KF+
Sbjct: 437 LRLQSKSGS--RLLRKFR 452
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 1/210 (0%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y D ++++ + RL L+ M P T+ I+ KP A+
Sbjct: 87 YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAV 146
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L +M E G + F T++D L ++ ++ F + + + D V Y V++ +
Sbjct: 147 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGW 205
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
KA ++ M+ +G PN+ TYN+M++GF AG+ A EM+ R C +
Sbjct: 206 CLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 265
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T+V AG++ A V M+ +G
Sbjct: 266 VTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 2/195 (1%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
QF LD R + D ++++ + + + +L++ M+ + PS F +
Sbjct: 75 QFFHFLDNHHRE-YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVA 133
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ + AG D F M GC D+ + ++ + +EKA +LF + + +
Sbjct: 134 ERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV 193
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
V TYN ++ G+C+ + +A ++KEM RG NPN YNT++ AG++ A E
Sbjct: 194 DTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 252
Query: 278 IRHMVEKGKYIHLVS 292
M ++ I +V+
Sbjct: 253 FLEMKKRDCEIDVVT 267
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 147/284 (51%), Gaps = 9/284 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V AR+ + R + F+P SY +L L ++++ +E ++
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSS---YGFQPDTVSYTTVLKGLCAAKRWEDVEELF 304
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++ P+ +T+++++ R G +++ ++L++M G + + NI+++ + K
Sbjct: 305 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 364
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LN+M G P + +TT++ GL RA + K EM K C P+ V +
Sbjct: 365 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 424
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I G +E+A L + M G N+ TYN+++ GFC+ G+ D A + M
Sbjct: 425 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP- 483
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + Y TL++ L NA +L A E++ M++K ++V+
Sbjct: 484 --CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 525
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 9/275 (3%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N L+ C G++ AR+++ + P +Y I+ L + +
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMPVA------PDAYTYTPIIRGLCDRGRVGEALSLLD 200
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M G P ++TY +++ A + Q +LDEM G +P+ TYN++++ + +
Sbjct: 201 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 260
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A LN + GF P + +TT++ GL A + + F EM K CMP+ V +
Sbjct: 261 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 320
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + G +E+A + + M G N N +I C G+ D+A + M S
Sbjct: 321 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 380
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GC+P+ + Y T++ L A + +A E+++ MV K
Sbjct: 381 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 415
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ G +Y ++ + ++ APD TY ++ G++ + LLD+M
Sbjct: 146 AYNTLVA---GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 202
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TY +LL + K A+ +L+ M+ G P+++ + +++G+ R G +
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 262
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + F + +++ G PD V YT ++ AA E ++LF M+ K +PN T++ +
Sbjct: 263 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 322
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+R FC G + A ++++M GC N + N +++ + G++ +A + + +M G
Sbjct: 323 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G VG A +++ + +P +Y +L A+ + V +M +G
Sbjct: 186 LCDRGRVGEALSLLDDMLHR---GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 242
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+I+TYN+++ R G++D L+ + GF PD +Y +L L +
Sbjct: 243 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 302
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M E P+ + F L+ R G ++ ++M+ GC + ++I +
Sbjct: 303 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 362
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G ++ A + M + G P+ +Y ++++G C A ++++A ++KEM + C PN +
Sbjct: 363 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 422
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+NT + L G + +A +I M E G +++V+
Sbjct: 423 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 458
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + G A D+ YN ++ R G+LD RL+ M +PD +TY ++ L
Sbjct: 131 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLC 187
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL+LL+ M G PSV+ +T L++ + ++ DEM KGC P++V
Sbjct: 188 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 247
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+I G ++ A++ + + + G P+ +Y ++++G C A ++++ + EM
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C PN + ++ LV G + A +V+ M G
Sbjct: 308 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 346
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 128/248 (51%), Gaps = 10/248 (4%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+ P SY +L L +++ + + ++M + P+ +T+N +C + G ++Q
Sbjct: 380 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 439
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L+++M G + TYN L++ V G+ D +AL L M P+ + +TT
Sbjct: 440 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD---SALELFYSMP---CKPNTITYTT 493
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ GL A LDA EM K C P+VV + V+++ + G +++A +L + M+ G
Sbjct: 494 LLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHG 553
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PN+ TYN+++ G +EA ++ + S G +P+ + Y++++ L ++ EA
Sbjct: 554 CTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613
Query: 276 EVIRHMVE 283
++ H+V+
Sbjct: 614 KMF-HIVQ 620
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 107/231 (46%), Gaps = 7/231 (3%)
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A R +L++ + + G APD+ ++ R G+ R+L RSG +
Sbjct: 87 ATTSPRAARLVD----RATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAV 142
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D YN L+ + + AA L+ M P +T ++ GL G +
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLL 199
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M ++GC P VV YTV++ + + +A ++ D M KG PN+ TYN +I G C
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 259
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G+ D+A + + S G P+ + Y T++ L A + + E+ M+EK
Sbjct: 260 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 5/286 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
M+ P TFN IC + GL + + +YNA+++ + R
Sbjct: 412 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 471
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+E Y P+ +TY ++ +LD LL EM + +P+ T+N
Sbjct: 472 VDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 527
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L+ + A+ L+ M E G P+++ + TL+DG+++ N + + +
Sbjct: 528 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 587
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+V Y+ +I +E+A +F + G P YN ++ C D A
Sbjct: 588 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 647
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC PN L Y TL+ L N L E +++R + +G
Sbjct: 648 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 3/192 (1%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
RL+D G +PD + L+ L + + A +L + G V + TL+ G
Sbjct: 95 RLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGY 154
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G LDA + M PD YT +I G + +A L D M+ +G P+V
Sbjct: 155 CRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY ++ C + F +A ++ EM ++GC PN + YN +++ + G++ +A E +
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271
Query: 281 MVEKGKYIHLVS 292
+ G VS
Sbjct: 272 LSSYGFQPDTVS 283
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 10/260 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T+N L+ C G V A +E F +P +Y +L L
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYS---MPCKPNTITYTTLLTGLCN 500
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M + AP+++T+N+++ + G +D+ L+++M G +P+ T
Sbjct: 501 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 560
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL + K AL LL+ + G P ++ +++++ LSR ++ F +
Sbjct: 561 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 620
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P V Y ++ + + A D F M++ G +PN TY ++I G
Sbjct: 621 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 680
Query: 238 EACTMMKEMESRGC-NPNFL 256
E +++E+ SRG N N L
Sbjct: 681 ETRDLLRELCSRGVLNKNLL 700
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 47/326 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G P + T N LI C G++ A ++V+ ++ L R +YNA++ LG
Sbjct: 456 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRI---TYNALI---LG 509
Query: 58 IRQYKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+E + ++M+ G PDI TYN ++ +GKLD +L DE SG +
Sbjct: 510 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 569
Query: 115 FHTYNILLHVLGKGDK-----------------------------------PLAALNLLN 139
HTY I++ K ++ AAL LL
Sbjct: 570 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 629
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
+MK G P+ +++L+ G+ G ++ K+ DEM +G +P+VVCYT +I Y G
Sbjct: 630 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLG 689
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+++ A+ + MI+ PN FTY MI G+C G ++A ++ +M+ G P+ + YN
Sbjct: 690 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYN 749
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
L + A + A +V M +G
Sbjct: 750 VLTNGFCKANDMDNAFKVCDQMATEG 775
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ F + +L+C + G + E + + K + NA++H L G +
Sbjct: 421 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 480
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M + G D +TYN ++ GK++ RL +EM + G PD +TYN
Sbjct: 481 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 540
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L K A+ L + K G ++ + +M+G +A ++ + F+E+ +K
Sbjct: 541 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 600
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + Y ++I ++ G + A L + M +KG LPN TY+S+I G C G ++A
Sbjct: 601 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 660
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ EM G PN + Y L+ G++ A M+
Sbjct: 661 HLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 703
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 36/278 (12%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + N L +L+ +++ V++ MS EG PD+ ++ V+ A + GK++ L
Sbjct: 184 PSLKTCNFXLSSLVKANEFEKCCEVFRVMS-EGACPDVFSFTNVINALCKGGKMENAIEL 242
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+M + G SP+ TYN +++ L + + A L M G P++ + L++GL +
Sbjct: 243 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 302
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
D + DEM G P+VV + +I Y G +E A + D MI+K P T
Sbjct: 303 LNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 362
Query: 223 YNSMIRGFCMAGKFDEACTMMKE-----------------------------------ME 247
S+++GFC + + + A ++E M
Sbjct: 363 LYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 422
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SR P+ L+ LV L GK EA E+ ++EKG
Sbjct: 423 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 460
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 104/223 (46%), Gaps = 1/223 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ ++ +G P + T N + + + + ++ + M G PD ++ +++ L
Sbjct: 173 VFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALC 231
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
KG K A+ L M+++G P+V+ + +++GL + G LD ++M KG P++
Sbjct: 232 KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLK 291
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I I +K + D MI G PNV +N++I G+C G + A + M
Sbjct: 292 TYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVM 351
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
S+ P + +L+ + ++ A + ++ G IH
Sbjct: 352 ISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 394
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 133/320 (41%), Gaps = 36/320 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E P N++ C + G +E F+K + P +YN I++ L +
Sbjct: 212 MSEGACPDVFSFTNVINALC-KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 270
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M+ +G P++ TY ++ +L D+ + +LDEM +GF+P+ +N
Sbjct: 271 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNN 330
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K AL + + M P+ + +LM G ++ ++ + +E+ + G
Sbjct: 331 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 390
Query: 181 CM-----------------------------------PDVVCYTVMITSYIAAGELEKAQ 205
P + T+++ G+ +A
Sbjct: 391 LSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 450
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L+ ++ KG + T N++I G C AGK EA ++KEM RG + + YN L+
Sbjct: 451 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 510
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
N GK+ + M ++G
Sbjct: 511 CNEGKVEGCFRLREEMTKRG 530
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 37/306 (12%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N +I + G E K + +P +Y A+++ L+ + + +
Sbjct: 250 GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKV 309
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M G+ P+++ +N ++ ++G ++ ++ D M +P T L+
Sbjct: 310 NHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQG 369
Query: 125 LGKGDKPLAALNLLNHMKEVG-----------------------------------FDPS 149
K D+ A N L + G F PS
Sbjct: 370 FCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPS 429
Query: 150 VLHFTTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
L T L+ GL + G +L+A + +F + KG V +I AG+L +A +
Sbjct: 430 DLLLTMLVCGLCKDGKHLEATELWF-RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIV 488
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ +G + TYN++I GFC GK + + +EM RG P+ YN L+ L N
Sbjct: 489 KEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNV 548
Query: 269 GKLAEA 274
GKL +A
Sbjct: 549 GKLDDA 554
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN I+ A + + M +G P+ TY+ ++ +G ++ L+DEM
Sbjct: 608 YNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMR 667
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ GF P+ Y L+ K + A + M P+ +T ++DG + GN++
Sbjct: 668 KEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNME 727
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+M G +PDVV Y V+ + A +++ A + D M T+G + TY +++
Sbjct: 728 KANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLV 787
Query: 228 RGF 230
G+
Sbjct: 788 HGW 790
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A+ +++ K F P Y A++ + Q E + +M
Sbjct: 650 VCNIGLVEDAKHLIDEMRKE---GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 706
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ TY +++ +LG +++ + LL +M SG PD TYN+L + K + A
Sbjct: 707 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 766
Query: 137 LLNHMKEVGFDPSVLHFTTLMDG 159
+ + M G + +TTL+ G
Sbjct: 767 VCDQMATEGLPVDEITYTTLVHG 789
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M ++G PD++TYN+++ + G+LD+ + L+ M G P+ T+NI+L +
Sbjct: 107 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 166
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ + A LL+ M G PSV+ F L++ L R G L ++M GC P+ + Y
Sbjct: 167 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 226
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ + ++++A + D M+++G P++ TYN+++ C GK D A ++ ++ S+
Sbjct: 227 PLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 286
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
GC+P + YNT++ L GK A +++ M KG Y LVS R
Sbjct: 287 GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 339
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N+LI + G + ++ + +P ++N IL ++ +
Sbjct: 108 MRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGR 167
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + M +G +P ++T+NI++ R G L + +L++M G +P+ +YN
Sbjct: 168 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 227
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LLH K K A+ L+ M G P ++ + TL+ L + G +D +++++KG
Sbjct: 228 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 287
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P ++ Y +I G+ E+A L D M KG P++ TY+S++ G GK DEA
Sbjct: 288 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 347
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++E G PN + YN+++ L + + A + + +M+ K
Sbjct: 348 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 391
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 124/251 (49%), Gaps = 2/251 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + TFNILI GL + ++ K + P SYN +LH ++
Sbjct: 178 MLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKK 237
Query: 61 Y-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ IE++ M G PDI+TYN ++ A + GK+D +L+++ G SP TYN
Sbjct: 238 MDRAIEYL-DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYN 296
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K K A+ LL+ M+ G P ++ +++L+ GLSR G +D FF ++
Sbjct: 297 TVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGL 356
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ + Y ++ + + ++A D MI+K P TY +I G G EA
Sbjct: 357 GIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEA 416
Query: 240 CTMMKEMESRG 250
++ E+ SRG
Sbjct: 417 LDLLNELCSRG 427
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M G P+ L+YN ++ + K+D+ LD M G PD TYN LL L
Sbjct: 209 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 268
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A+ +LN + G P ++ + T++DGLS+ G + DEM KG PD++
Sbjct: 269 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 328
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +++ G++++A F + G PN TYNS++ G C + + D A + M
Sbjct: 329 TYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM 388
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S+ C P Y L+ + G EA +++ + +G
Sbjct: 389 ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 96/188 (51%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
Q +LLDEM G PD TYN+L++ + K + A+ LN+M G P+V+ ++
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 159
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ G + +M KGC P VV + ++I G L +A D+ + M G
Sbjct: 160 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 219
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
PN +YN ++ GFC K D A + M SRGC P+ + YNTL++ L GK+ A E+
Sbjct: 220 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 279
Query: 278 IRHMVEKG 285
+ + KG
Sbjct: 280 LNQLSSKG 287
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 83/159 (52%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ LL+ M+ G P V+ + L++G+ + G LD F + M + GC P+V+ + +++
Sbjct: 101 AMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILR 160
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S + G A+ L M+ KG P+V T+N +I C G A ++++M GC P
Sbjct: 161 SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTP 220
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N L YN L+ K+ A E + MV +G Y +V+
Sbjct: 221 NSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 145/279 (51%), Gaps = 13/279 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NIL+ C G+V A+ V+ +K+ + +P +Y+ ++ + + K + V+
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACV---KPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS G PD+ TY I++ + +D+ L EM + P TY+ L+ L K
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +L++ M + G +V+ +++L+DGL + G+LD F++M ++G P+ +
Sbjct: 388 GRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTF 447
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+ AQ++F ++TKG NV+TYN MI G C G +EA TM+ +ME
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMED 507
Query: 249 RGCNPNFLVYNTLV-------SNLRNAGKLAEAHEVIRH 280
GC P+ + + ++ N N G + E++ H
Sbjct: 508 NGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEH 546
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF ++ LI ++G R ++ K +P Y+ I+ AL +
Sbjct: 155 LLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALC---K 211
Query: 61 YKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y+L+ Y +M+ +G + D++TY+ ++ GKL + LL+EM +P+ +T
Sbjct: 212 YQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYT 271
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K K A ++L M + P V+ ++TLMDG + ++ F+ M+
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDV YT++I + +++A +LF M K +P + TY+S+I G C +G+
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM RG N + Y++L+ L G L A + M ++G
Sbjct: 392 YVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQG 439
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 144/297 (48%), Gaps = 10/297 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+P T N LI C G+V A ++ + F+ + SY +++ +
Sbjct: 120 ILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ---GFQLNQVSYGTLINGVCK 176
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA--KYRLGKLDQFHRLLDEMGRSGFSPDF 115
I + + Q++ P+++ Y+ ++ A KY+L + + + L EM G S D
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQL--VSEAYGLFSEMTVKGISADV 234
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ L++ K A+ LLN M +P+V + L+D L + G + K
Sbjct: 235 VTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAV 294
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PDV+ Y+ ++ Y E++KAQ +F+ M G P+V TY +I GFC
Sbjct: 295 MLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKM 354
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEA + KEM + P + Y++L+ L +G++ ++I M ++G+ ++++
Sbjct: 355 VDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVIT 411
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 125/254 (49%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
V +F + P +N IL + ++ Y + ++ +G PD++T NI++
Sbjct: 44 VSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINC 103
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+G++ +L ++ + G+ PD T N L+ L + AL+ + + GF +
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + TL++G+ + G+ A ++ + P+VV Y+ +I + + +A LF
Sbjct: 164 QVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFS 223
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M KG +V TY+++I GFC+ GK EA ++ EM + NPN YN LV L G
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283
Query: 270 KLAEAHEVIRHMVE 283
K+ EA V+ M++
Sbjct: 284 KVKEAKSVLAVMLK 297
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 75 GYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
GY PD +T+ + +C K ++ K FH D++ GF + +Y L++ + K
Sbjct: 991 GYHPDTITFTTLINGLCLKGQVNKALHFH---DKLLAQGFQLNQVSYGTLINGVCKIGDT 1047
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AA+ LL + P V+ + T++D L + + F EM KG DVV Y +
Sbjct: 1048 RAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTL 1107
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK--FDEACTMMKEMESR 249
I + G+L++A L + M+ K PNV TYN ++ C GK DE+ +M+ +ME
Sbjct: 1108 IYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDN 1167
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC N + + ++S L + + +++ M+ +G
Sbjct: 1168 GCKANAVTFEIIISALFEKDENDKVEKLLHEMIARG 1203
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 2/230 (0%)
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ Y + ++ +G PD+ T NI++ +G++ +L ++ + G+ PD T
Sbjct: 939 MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTIT 998
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L++ L + AL+ + + GF + + + TL++G+ + G+ A ++
Sbjct: 999 FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PDVV Y +I + + KA LF M KG +V TYN++I GFC+ GK
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK--LAEAHEVIRHMVEKG 285
EA ++ +M + NPN YN LV L GK L E+ ++ M + G
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNG 1168
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 6/199 (3%)
Query: 67 VYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V ++ GY PD +T N + +C K ++ K FH D++ GF + +Y L++
Sbjct: 116 VLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFH---DKLLAQGFQLNQVSYGTLIN 172
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ K AA+ LL + P+V+ ++T++D L + + F EM KG
Sbjct: 173 GVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISA 232
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV Y+ +I + G+L++A L + M+ K PNV+TYN ++ C GK EA +++
Sbjct: 233 DVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVL 292
Query: 244 KEMESRGCNPNFLVYNTLV 262
M P+ + Y+TL+
Sbjct: 293 AVMLKACVKPDVITYSTLM 311
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 4/197 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+ QF+R+L +P +N +L K A++L + ++ G P ++
Sbjct: 44 VSQFNRMLCMR----HTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ G + ++ +G PD V +I G+++KA D ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
N +Y ++I G C G A ++++++ R PN ++Y+T++ L ++EA+
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219
Query: 276 EVIRHMVEKGKYIHLVS 292
+ M KG +V+
Sbjct: 220 GLFSEMTVKGISADVVT 236
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/148 (18%), Positives = 70/148 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++ N M + P ++ F ++D ++ + + KG PD++ ++I
Sbjct: 43 AVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILIN 102
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ + ++ +G P+ T N++I+G C+ G+ +A ++ ++G
Sbjct: 103 CFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL 162
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N + Y TL++ + G A ++++ +
Sbjct: 163 NQVSYGTLINGVCKIGDTRAAIKLLQKI 190
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 9/150 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T++ LI + G + + F K K RP ++ +L L +
Sbjct: 400 MHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGR 459
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V+Q + +GY ++ TYN+++ + G L++ +L +M +G PD T+ I
Sbjct: 460 LKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEI 519
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
++ L K D+ + VGFD V
Sbjct: 520 IIIALFKKDE---------NGGNVGFDKKV 540
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 58/128 (45%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N+D F+ M P ++ + ++ S+ A L + KG P++ T N
Sbjct: 39 NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I FC G+ +++ ++ RG P+ + NTL+ L G++ +A ++ +
Sbjct: 99 ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158
Query: 285 GKYIHLVS 292
G ++ VS
Sbjct: 159 GFQLNQVS 166
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 44/79 (55%)
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG P++FT N +I FC G+ +++ ++ RG +P+ + + TL++ L G++ +
Sbjct: 955 KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A ++ +G ++ VS
Sbjct: 1015 ALHFHDKLLAQGFQLNQVS 1033
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 141/291 (48%), Gaps = 19/291 (6%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H
Sbjct: 92 TKEHKFRVPFDTC------RKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHX 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +L + V+ ++ G P ++++N +M ++G LD+ RL M SG PD
Sbjct: 146 FCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ +PD++ Y +I G+L++A DL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 326 DLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 135/273 (49%), Gaps = 2/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ LI E G R +E + +K FR PF I H L+ ++ +KL+ Y++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEH-LMKLKYFKLVWGFYEES 127
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ GY + +NI+M + G++ + D + + G P ++N L++ K
Sbjct: 128 LECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L + M+ G P V ++ L++GL + +D FDEM B G +P+ V +T +
Sbjct: 188 DEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTL 247
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + G ++ A +++ M+++ LP++ TYN++I G C G +A ++ EM +G
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGL 307
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL+ G L A E + M+++
Sbjct: 308 KPDKITYTTLIDGXCKEGDLETAFEYRKRMIKE 340
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ + I
Sbjct: 128 LECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITK---WGLRPSVVSFNTLMNGYIKI 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M++EM S G P Y +++ G + ++++ M G ++V+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P TFN LI GL +V + + P Y +L +
Sbjct: 251 MVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGH 310
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M G P+++ YN V+ + +Q LL EM + D T+NI
Sbjct: 311 LEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNI 370
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + LL M E G P V+ +TT+++G + G +D MA G
Sbjct: 371 LVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACG 430
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + YT+++ +A A+DL MI +G PN T+N++I C G ++A
Sbjct: 431 CRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAI 490
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++K+M GC+P+ + Y+T++ L AGK EA E++ MV KG
Sbjct: 491 ELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKG 535
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 129/247 (52%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F P SYNA+L L +++ ++ + ++M G P+++T+N ++ R G ++
Sbjct: 219 FGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFER 278
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
H++L +M G +PD Y +L + K A +L+ M G P+V+ + T++
Sbjct: 279 VHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLK 338
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL A + + EM + C D V + +++ + G + + +L + M+ G +P
Sbjct: 339 GLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVP 398
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TY ++I GFC G DEA ++K M + GC PN + Y ++ L +A + +A +++
Sbjct: 399 DVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458
Query: 279 RHMVEKG 285
M+E+G
Sbjct: 459 SQMIEQG 465
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +N P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 356 MFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN---GFCK 412
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + M+ G P+ ++Y IV+ + L+ +M G SP+ T
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N +++ L K A+ LL M G P ++ ++T++DGL +AG D + M
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+ + Y+ + ++ G + + +FD + + YN++I C G D
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + M S GC PN Y L+ L + G + EA E++ + KG
Sbjct: 593 RAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 135/274 (49%), Gaps = 6/274 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G R + + +C G + +A ++++R + +P YN +L L
Sbjct: 286 MVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPS---YGLKPNVVCYNTVLKGLCS 342
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D D +T+NI++ + G + + LL++M G PD T
Sbjct: 343 AERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVIT 402
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +++ K A+ LL M G P+ + +T ++ GL A + +M
Sbjct: 403 YTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMI 462
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC P+ V + +I G +E+A +L M+ G P++ +Y+++I G AGK D
Sbjct: 463 EQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTD 522
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
EA ++ M ++G +PN ++Y+++ S L G++
Sbjct: 523 EALELLNVMVNKGMSPNTIIYSSIASALSKEGRI 556
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 35/252 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G T+ +I + GL + V RP SY +L L +
Sbjct: 391 MLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAER 450
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + QM ++G +P+ +T+N V+ + G ++Q LL +M +G SPD +Y+
Sbjct: 451 WVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE----- 175
++ LGK K AL LLN M G P+ + ++++ LS+ G ++ FD
Sbjct: 511 VIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVT 570
Query: 176 ------------------------------MANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
M + GCMP+ YT++I + G +++AQ
Sbjct: 571 IRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQ 630
Query: 206 DLFDGMITKGQL 217
++ + +KG L
Sbjct: 631 EMLTELCSKGAL 642
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 100/213 (46%), Gaps = 5/213 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL---AA 134
P+ TY V+ A G++ +LDEM R G +P Y+++L +A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGL-SRAGNLD-ACKYFFDEMANKGCMPDVVCYTVMI 192
+ +L + G V + +++ + + G++D A + D + GC PDVV Y ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A + QDL + M+ G PNV T+N++I C G F+ ++ +M GC
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +Y T++ + G L AHE++ M G
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYG 325
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y M++ Y AG+L A+ L + PN +TY ++R C G+ +A +++ EM
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVPVP---PNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 248 SRGCNPNFLVYNTLV 262
RGC P +Y+ ++
Sbjct: 143 RRGCAPIPPMYHVIL 157
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 146/282 (51%), Gaps = 6/282 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+IL+ C G + A+ V+ +K + +P +Y++++ + + E ++
Sbjct: 405 TFSILVDGFCKDGNIKEAKNVLAMMMKQSI---KPDVVTYSSLMDGYCLVNEVNKAESIF 461
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS G ++ +YNI++ ++ +D+ +L EM PD TY+ L+ L K
Sbjct: 462 NTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKS 521
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL L++ M G P ++ + +++D L + ++D ++ +G PD+ Y
Sbjct: 522 GRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTY 581
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ +G+LE A+ +F+ ++ KG +V+ Y MI+GFC G FDEA ++ +ME
Sbjct: 582 TILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEE 641
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
GC P+ Y ++ +L + A +++R M+ +G + L
Sbjct: 642 NGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLLVAL 683
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 140/298 (46%), Gaps = 12/298 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++NG+ T I C G++ A ++ I F + SY +++ L
Sbjct: 254 ILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIA---MGFHLDQVSYGTLINGLCK 310
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + K + ++ + PD++ YN + MC + D F +++ + F PD
Sbjct: 311 VGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVN--DAFDLYSEKVSKRIF-PD 367
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN L+ K A++L N M P V F+ L+DG + GN+ K
Sbjct: 368 VFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLA 427
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M + PDVV Y+ ++ Y E+ KA+ +F+ M +G NV +YN MI GFC
Sbjct: 428 MMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIK 487
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEA + KEM + P+ + Y++L+ L +G+++ A E++ M +G+ +++
Sbjct: 488 MVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIIT 545
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 125/265 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I GF ++ LI +VG + +E ++ +P YN I+ + +
Sbjct: 289 VIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKH 348
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y + + PD+ TYN ++ +GKL L ++M PD +T++I
Sbjct: 349 VNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSI 408
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K A N+L M + P V+ +++LMDG ++ + F+ M+++G
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+V Y +MI + +++A LF M K P+V TY+S+I G C +G+ A
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
++ EM RG P+ + YN+++ L
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDAL 553
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 132/267 (49%), Gaps = 11/267 (4%)
Query: 27 RKVVERFIKSKLFN----FRPFKNSYNAILHALLGIRQYKL-IEWVYQQMSDEGYAPDIL 81
R ++ F++S+LFN F+ + + ++ +++ IE+ ++ GY PD +
Sbjct: 205 RLFLKDFLQSRLFNVLHSFKILIEYHKTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTI 264
Query: 82 TYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
T + C K ++ + FH D++ GF D +Y L++ L K + AAL LL
Sbjct: 265 TLTTFIKGFCLKGQIHQALHFH---DKVIAMGFHLDQVSYGTLINGLCKVGETKAALELL 321
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
P V+ + T++DG+ + +++ + E +K PDV Y +I+ +
Sbjct: 322 RRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIV 381
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+L+ A DLF+ M +K +P+V+T++ ++ GFC G EA ++ M + P+ + Y
Sbjct: 382 GKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTY 441
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++L+ ++ +A + M +G
Sbjct: 442 SSLMDGYCLVNEVNKAESIFNTMSHRG 468
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 128/274 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI VG + ++ F K N P +++ ++ K + V M
Sbjct: 370 TYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMM 429
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ PD++TY+ +M + ++++ + + M G + + +YNI+++ K
Sbjct: 430 MKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMV 489
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ L M P V+ +++L+DGL ++G + DEM +G PD++ Y +
Sbjct: 490 DEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSI 549
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + ++KA L + +G P++ TY +++G C +GK ++A + +++ +G
Sbjct: 550 LDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGY 609
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y ++ + G EA ++ M E G
Sbjct: 610 NLDVYAYTVMIQGFCDKGLFDEALALLSKMEENG 643
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 147/284 (51%), Gaps = 9/284 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V AR+ + R + F+P SY +L L ++++ +E ++
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSS---YGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++ P+ +T+++++ R G +++ ++L++M G + + NI+++ + K
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LN+M G P + +TT++ GL RA + K EM K C P+ V +
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I G +E+A L + M G N+ TYN+++ GFC+ G+ D A + M
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP- 452
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + Y TL++ L NA +L A E++ M++K ++V+
Sbjct: 453 --CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 9/275 (3%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N L+ C G++ AR+++ + P +Y I+ L + +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVA------PDAYTYTPIIRGLCDRGRVGEALSLLD 169
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M G P ++TY +++ A + Q +LDEM G +P+ TYN++++ + +
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A LN + GF P + +TT++ GL A + + F EM K CMP+ V +
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + G +E+A + + M G N N +I C G+ D+A + M S
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GC+P+ + Y T++ L A + +A E+++ MV K
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ G +Y ++ + ++ APD TY ++ G++ + LLD+M
Sbjct: 115 AYNTLVA---GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TY +LL + K A+ +L+ M+ G P+++ + +++G+ R G +
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + F + +++ G PD V YT ++ AA E ++LF M+ K +PN T++ +
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+R FC G + A ++++M GC N + N +++ + G++ +A + + +M G
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G VG A +++ + +P +Y +L A+ + V +M +G
Sbjct: 155 LCDRGRVGEALSLLDDMLHR---GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+I+TYN+++ R G++D L+ + GF PD +Y +L L +
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M E P+ + F L+ R G ++ ++M+ GC + ++I +
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G ++ A + M + G P+ +Y ++++G C A ++++A ++KEM + C PN +
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+NT + L G + +A +I M E G +++V+
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 427
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + G A D+ YN ++ R G+LD RL+ M +PD +TY ++ L
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLC 156
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL+LL+ M G PSV+ +T L++ + ++ DEM KGC P++V
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+I G ++ A++ + + + G P+ +Y ++++G C A ++++ + EM
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C PN + ++ LV G + A +V+ M G
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 127/244 (52%), Gaps = 10/244 (4%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY +L L +++ + + ++M + P+ +T+N +C + G ++Q L
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412
Query: 103 LDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+++M G + TYN L++ V G+ D +AL L M P+ + +TTL+ G
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVD---SALELFYSMP---CKPNTITYTTLLTG 466
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L A LDA EM K C P+VV + V+++ + G +++A +L + M+ G PN
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ TYN+++ G +EA ++ + S G +P+ + Y++++ L ++ EA ++
Sbjct: 527 LITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF- 585
Query: 280 HMVE 283
H+V+
Sbjct: 586 HIVQ 589
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
N NA L L+ + + + G APD+ ++ R G+ R+L
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA 103
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
RSG + D YN L+ + + AA L+ M P +T ++ GL G
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGR 160
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ D+M ++GC P VV YTV++ + + +A ++ D M KG PN+ TYN
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 220
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I G C G+ D+A + + S G P+ + Y T++ L A + + E+ M+EK
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 5/286 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
M+ P TFN IC + GL + + +YNA+++ + R
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+E Y P+ +TY ++ +LD LL EM + +P+ T+N
Sbjct: 441 VDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L+ + A+ L+ M E G P+++ + TL+DG++ N + + +
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSN 556
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+V Y+ +I +E+A +F + G P YN ++ C D A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC PN L Y TL+ L N L E +++R + +G
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 3/197 (1%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L + RL+D G +PD + L+ L + + A +L + G V + T
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ G R G LDA + M PD YT +I G + +A L D M+ +G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P+V TY ++ C + F +A ++ EM ++GC PN + YN +++ + G++ +A
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 276 EVIRHMVEKGKYIHLVS 292
E + + G VS
Sbjct: 236 EFLNRLSSYGFQPDTVS 252
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 118/260 (45%), Gaps = 10/260 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T+N L+ C G V A +E F +P +Y +L L
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYS---MPCKPNTITYTTLLTGLCN 469
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M + AP+++T+N+++ + G +D+ L+++M G +P+ T
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL + AL LL+ + G P ++ +++++ LSR ++ F +
Sbjct: 530 YNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P V Y ++ + + A D F M++ G +PN TY ++I G
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 649
Query: 238 EACTMMKEMESRGC-NPNFL 256
E +++E+ SRG N N L
Sbjct: 650 ETRDLLRELCSRGVLNKNLL 669
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 147/284 (51%), Gaps = 9/284 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V AR+ + R + F+P SY +L L ++++ +E ++
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSS---YGFQPDTVSYTTVLKGLCAAKRWEDVEELF 273
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++ P+ +T+++++ R G +++ ++L++M G + + NI+++ + K
Sbjct: 274 AEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQ 333
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LN+M G P + +TT++ GL RA + K EM K C P+ V +
Sbjct: 334 GRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTF 393
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I G +E+A L + M G N+ TYN+++ GFC+ G+ D A + M
Sbjct: 394 NTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP- 452
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + Y TL++ L NA +L A E++ M++K ++V+
Sbjct: 453 --CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVT 494
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 130/275 (47%), Gaps = 9/275 (3%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N L+ C G++ AR+++ + P +Y I+ L + +
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVA------PDAYTYTPIIRGLCDRGRVGEALSLLD 169
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M G P ++TY +++ A + Q +LDEM G +P+ TYN++++ + +
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A LN + GF P + +TT++ GL A + + F EM K CMP+ V +
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + G +E+A + + M G N N +I C G+ D+A + M S
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GC+P+ + Y T++ L A + +A E+++ MV K
Sbjct: 350 GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRK 384
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 122/239 (51%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ G +Y ++ + ++ APD TY ++ G++ + LLD+M
Sbjct: 115 AYNTLVA---GYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TY +LL + K A+ +L+ M+ G P+++ + +++G+ R G +
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + F + +++ G PD V YT ++ AA E ++LF M+ K +PN T++ +
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+R FC G + A ++++M GC N + N +++ + G++ +A + + +M G
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 129/276 (46%), Gaps = 3/276 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G VG A +++ + +P +Y +L A+ + V +M +G
Sbjct: 155 LCDRGRVGEALSLLDDMLHR---GCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGC 211
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+I+TYN+++ R G++D L+ + GF PD +Y +L L +
Sbjct: 212 TPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEE 271
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M E P+ + F L+ R G ++ ++M+ GC + ++I +
Sbjct: 272 LFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTIC 331
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G ++ A + M + G P+ +Y ++++G C A ++++A ++KEM + C PN +
Sbjct: 332 KQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEV 391
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+NT + L G + +A +I M E G +++V+
Sbjct: 392 TFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVT 427
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + G A D+ YN ++ R G+LD RL+ M +PD +TY ++ L
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLC 156
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL+LL+ M G PSV+ +T L++ + ++ DEM KGC P++V
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+I G ++ A++ + + + G P+ +Y ++++G C A ++++ + EM
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C PN + ++ LV G + A +V+ M G
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 127/244 (52%), Gaps = 10/244 (4%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY +L L +++ + + ++M + P+ +T+N +C + G ++Q L
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 412
Query: 103 LDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+++M G + TYN L++ V G+ D +AL L M P+ + +TTL+ G
Sbjct: 413 IEQMSEHGCEVNIVTYNALVNGFCVQGRVD---SALELFYSMP---CKPNTITYTTLLTG 466
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L A LDA EM K C P+VV + V+++ + G +++A +L + M+ G PN
Sbjct: 467 LCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPN 526
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ TYN+++ G +EA ++ + S G +P+ + Y++++ L ++ EA ++
Sbjct: 527 LITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF- 585
Query: 280 HMVE 283
H+V+
Sbjct: 586 HIVQ 589
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 3/239 (1%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
N NA L L+ + + + G APD+ ++ R G+ R+L
Sbjct: 44 NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRA 103
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
RSG + D YN L+ + + AA L+ M P +T ++ GL G
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGR 160
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ D+M ++GC P VV YTV++ + + +A ++ D M KG PN+ TYN
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNV 220
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I G C G+ D+A + + S G P+ + Y T++ L A + + E+ M+EK
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 121/286 (42%), Gaps = 5/286 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
M+ P TFN IC + GL + + +YNA+++ + R
Sbjct: 381 MVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGR 440
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+E Y P+ +TY ++ +LD LL EM + +P+ T+N
Sbjct: 441 VDSALELFYSMPCK----PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFN 496
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L+ + A+ L+ M E G P+++ + TL+DG+++ N + + +
Sbjct: 497 VLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN 556
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+V Y+ +I +E+A +F + G P YN ++ C D A
Sbjct: 557 GVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGA 616
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC PN L Y TL+ L N L E +++R + +G
Sbjct: 617 IDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 3/197 (1%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L + RL+D G +PD + L+ L + + A +L + G V + T
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ G R G LDA + M PD YT +I G + +A L D M+ +G
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P+V TY ++ C + F +A ++ EM ++GC PN + YN +++ + G++ +A
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 276 EVIRHMVEKGKYIHLVS 292
E + + G VS
Sbjct: 236 EFLNRLSSYGFQPDTVS 252
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 10/260 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T+N L+ C G V A +E F +P +Y +L L
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYS---MPCKPNTITYTTLLTGLCN 469
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M + AP+++T+N+++ + G +D+ L+++M G +P+ T
Sbjct: 470 AERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLIT 529
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL + K AL LL+ + G P ++ +++++ LSR ++ F +
Sbjct: 530 YNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQ 589
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P V Y ++ + + A D F M++ G +PN TY ++I G
Sbjct: 590 DLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLK 649
Query: 238 EACTMMKEMESRGC-NPNFL 256
E +++E+ SRG N N L
Sbjct: 650 ETRDLLRELCSRGVLNKNLL 669
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P K +Y+ ++ L + Q + +QM + + PD +TYN+++ +R R
Sbjct: 359 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFR 418
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL EM +G SP+ +TY+I++H L + +P A +LL M G P+ + L+ G
Sbjct: 419 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 478
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R GN+ FD+M +PD+ CY +I G +E++ F M +G LPN F
Sbjct: 479 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 538
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+ +I G+ G + A +++ M G PN ++Y L+ + + + + + M
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 282 VEKG 285
+++G
Sbjct: 599 LDQG 602
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LI +VG + + F + + P + +Y+ ++H L + E + Q+M
Sbjct: 505 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 564
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D G P+ + Y ++ + ++ +++ M G D Y IL+H L
Sbjct: 565 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 624
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AA +L+ +++ G P V +++L+ GL + + + DEM+ KG P++VCY +I
Sbjct: 625 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 684
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+G++ A+++F+ ++ KG +PN TY S+I G C G A + EM + G
Sbjct: 685 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 744
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ VY+ L + +AG L +A +I M +G
Sbjct: 745 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 1/237 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++H L + V + G PD+ Y+ ++ + ++ +LDEM
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ G P+ YN L+ L K A N+ N + G P+ + +T+L+DG + G++
Sbjct: 670 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 729
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
Y ++EM G PD Y+V+ T +AG+LE+A L + M +G ++ ++N+++
Sbjct: 730 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLV 788
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GFC GK E ++ + RG PN L ++S L AGKL+E H + + +K
Sbjct: 789 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 845
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N+LI G + + + P +Y A+++ L R+
Sbjct: 248 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 307
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +MS P+++ Y ++ R G D+ +++ EM +G P+ TY+
Sbjct: 308 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 367
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A LL M P + + +++G R + EM N G
Sbjct: 368 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 427
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V Y++MI +GE EKA DL + M TKG PN F Y +I G+C G AC
Sbjct: 428 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 487
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M P+ YN+L+ L G++ E+ + M E+G
Sbjct: 488 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++I+I C GE A ++E L +P Y ++
Sbjct: 423 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL---KPNAFVYAPLISGYCR 479
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
L ++ +M+ PD+ YN ++ ++G++++ + +M G P+ T
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+H K +A L+ M + G P+ + + L++ ++ +++ F M
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G M D Y ++I + ++G +E A + G+ G +P+V Y+S+I G C +
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ EM +G +PN + YN L+ L +G ++ A V ++ KG
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 707
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 120/262 (45%), Gaps = 5/262 (1%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
G V++R ++ R + + L A +R++ + V +M + G + +TY
Sbjct: 206 GSQHSVLQRAVEGSAARGR-----HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTY 260
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
N+++ R G +++ +M G PD TY L++ L K + A LL+ M
Sbjct: 261 NVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC 320
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P+V+ + L+DG R GN D EM G P+ + Y ++ G++++
Sbjct: 321 AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDR 380
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A L M+ P+ TYN +I G +A ++ EME+ G +PN Y+ ++
Sbjct: 381 ASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIH 440
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L +G+ +A +++ M KG
Sbjct: 441 GLCQSGEPEKASDLLEEMTTKG 462
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 139/299 (46%), Gaps = 8/299 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T++ L+ C G++ A ++++ ++ + RP +YN I+
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD---SHRPDTITYNLIIEGHFR 409
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +M + G +P++ TY+I++ + G+ ++ LL+EM G P+
Sbjct: 410 HHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 469
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + A + + M +V P + + +L+ GLS+ G ++ +F +M
Sbjct: 470 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 529
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+ Y+ +I Y+ G+LE A+ L M+ G PN Y ++ + + +
Sbjct: 530 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 589
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY--IHLVSKF 294
+ + K M +G + +Y L+ NL ++G + A V+ + + G +H+ S
Sbjct: 590 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 119/288 (41%), Gaps = 24/288 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G +N LI C G++ AR V + L P +Y +++
Sbjct: 668 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV---PNCVTYTSLIDGSCK 724
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++Y +M G PD Y+++ G L+Q L++EM G + +
Sbjct: 725 VGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISS 783
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ K K L LL+ + G P+ L ++ GLS AG L F E+
Sbjct: 784 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 843
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K TS AA LF MI +G++P + + MIR C G D
Sbjct: 844 QK-------------TSESAARHF---SSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLD 886
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + + ++ Y +V NL GKL+EA +++ M ++G
Sbjct: 887 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 123/244 (50%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P K +Y+ ++ L + Q + +QM + + PD +TYN+++ +R R
Sbjct: 254 QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFR 313
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL EM +G SP+ +TY+I++H L + +P A +LL M G P+ + L+ G
Sbjct: 314 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R GN+ FD+M +PD+ CY +I G +E++ F M +G LPN F
Sbjct: 374 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 433
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+ +I G+ G + A +++ M G PN ++Y L+ + + + + + M
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 282 VEKG 285
+++G
Sbjct: 494 LDQG 497
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LI +VG + + F + + P + +Y+ ++H L + E + Q+M
Sbjct: 400 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 459
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D G P+ + Y ++ + ++ +++ M G D Y IL+H L
Sbjct: 460 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 519
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AA +L+ +++ G P V +++L+ GL + + + DEM+ KG P++VCY +I
Sbjct: 520 AAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 579
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+G++ A+++F+ ++ KG +PN TY S+I G C G A + EM + G
Sbjct: 580 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 639
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ VY+ L + +AG L +A +I M +G
Sbjct: 640 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 118/237 (49%), Gaps = 1/237 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++H L + V ++ G PD+ Y+ ++ + ++ +LDEM
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ G P+ YN L+ L K A N+ N + G P+ + +T+L+DG + G++
Sbjct: 565 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 624
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
Y ++EM G PD Y+V+ T +AG+LE+A L + M +G ++ ++N+++
Sbjct: 625 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLV 683
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GFC GK E ++ + RG PN L ++S L AGKL+E H + + +K
Sbjct: 684 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 127/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N+LI G + + + P +Y A+++ L R+
Sbjct: 143 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 202
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +MS P+++ Y ++ R G D+ +++ EM +G P+ TY+
Sbjct: 203 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 262
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A LL M P + + +++G R N EM N G
Sbjct: 263 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAG 322
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V Y++MI +GE EKA DL + M TKG PN F Y +I G+C G AC
Sbjct: 323 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 382
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M P+ YN+L+ L G++ E+ + M E+G
Sbjct: 383 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G + R N L+ + L KV E + + + P +Y+ ++ A
Sbjct: 73 MRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGI---SPDVYTYSTLIEAYCK 129
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+R++ + V +M + G + +TYN+++ R G +++ +M G PD T
Sbjct: 130 VREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFT 189
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ L K + A LL+ M P+V+ + L+DG R GN D EM
Sbjct: 190 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 249
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+ + Y ++ G++++A L M+ P+ TYN +I G
Sbjct: 250 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKK 309
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ EME+ G +PN Y+ ++ L +G+ +A +++ M KG
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG 357
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T++I+I C GE A ++E L +P Y ++
Sbjct: 322 GISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL---KPNAFVYAPLISGYCREGNV 378
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
L ++ +M+ PD+ YN ++ ++G++++ + +M G P+ TY+ L
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H K +A L+ M + G P+ + + L++ ++ +++ F M ++G
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
M D Y ++I + ++G +E A + + G +P+V Y+S+I G C ++A
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM +G +PN + YN L+ L +G ++ A V ++ KG
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 602
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 139/299 (46%), Gaps = 8/299 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T++ L+ C G++ A ++++ ++ + RP +YN I+
Sbjct: 248 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD---SHRPDTITYNLIIEGHFR 304
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +M + G +P++ TY+I++ + G+ ++ LL+EM G P+
Sbjct: 305 HHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 364
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + A + + M +V P + + +L+ GLS+ G ++ +F +M
Sbjct: 365 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 424
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+ Y+ +I Y+ G+LE A+ L M+ G PN Y ++ + + +
Sbjct: 425 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 484
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY--IHLVSKF 294
+ + K M +G + +Y L+ NL ++G + A V+ + + G +H+ S
Sbjct: 485 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 29/273 (10%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G +N LI C G++ AR V + L P +Y +++
Sbjct: 563 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV---PNCVTYTSLIDGSCK 619
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++Y +M G PD Y+++ G L+Q L++EM G + +
Sbjct: 620 VGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISS 678
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD---------- 167
+N L+ K K L LL+ + G P+ L ++ GLS AG L
Sbjct: 679 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 738
Query: 168 ------ACKYF---FDEMANKGCMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
A ++F F +M N+G +P DVV MI + G L+KA L D ++ K
Sbjct: 739 QKTSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAP 796
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+Y +++ C GK EA ++KEM+ RG
Sbjct: 797 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 120/214 (56%), Gaps = 1/214 (0%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ ++GY PD++ ++ + +++ R++ E+ S PD YN ++ K ++
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNR 152
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA +LN MK GF P ++ + ++ L L D++ CMP V+ YT+
Sbjct: 153 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTI 212
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I + I G + +A L + M+ +G LP+++TYN++IRG C G +DE ++ EM SRG
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRG 272
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
C PN + Y+ L+S+L G++ EA V++ M+EK
Sbjct: 273 CEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 306
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNA++ + + + V +M G+ PDI+TYNI++ + KL ++LD++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
P TY IL+ A+ LL M G P + + ++ G+ + G
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMW 258
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + EM ++GC P+ V Y+++I+S G +++A + MI K P+ ++Y+ +
Sbjct: 259 DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPL 318
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
I C G+ D A +M M S GC P+ + YNT+++ L G +A E+ +
Sbjct: 319 ISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 373
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 113/231 (48%), Gaps = 2/231 (0%)
Query: 57 GIRQYKLIEWVYQQMS--DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
G +K IE + M + PD+ YN V+ ++ +++ ++L+ M GF PD
Sbjct: 112 GFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPD 171
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYNI++ L K AL +L+ + P+V+ +T L++ G ++ +
Sbjct: 172 IVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLE 231
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM +G +PD+ Y +I G ++ + L M ++G PN TY+ +I C G
Sbjct: 232 EMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFG 291
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ DEA +++K M + P+ Y+ L+S L G+L A ++ +M+ G
Sbjct: 292 RIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 342
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 3/237 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C + A +V+ R K F P +YN ++ +L R+ L V Q+ +
Sbjct: 148 CKVNRIEAATQVLNRM---KARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCM 204
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++TY I++ A G +++ +LL+EM G PD +TYN ++ + K L
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKL 264
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G +P+ + ++ L+ L R G +D M K PD Y +I++
Sbjct: 265 VAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCK 324
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G L+ A + D MI+ G LP++ YN+++ C G ++A + ++ GC PN
Sbjct: 325 EGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 110/226 (48%), Gaps = 14/226 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M GF T+NI+I C ++GLA KV+++ + L N P +Y ++ A +
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL---LDNCMPTVITYTILIEATIV 219
Query: 57 --GIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
GI + KL+E +M G PD+ TYN ++ + G D+ +L+ EM G P
Sbjct: 220 EGGINEAMKLLE----EMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEP 275
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+IL+ L + + A+++L M E P + L+ L + G LD
Sbjct: 276 NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIM 335
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
D M + GC+PD+V Y ++ + G +A ++F+ + G PN
Sbjct: 336 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
H++ F + H L++ +AG + YF + + NKG PDV+ T +I +
Sbjct: 60 HLQSYDFRET--HLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFK 117
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+EKA + + + + + P+VF YN++I GFC + + A ++ M++RG P+ + YN
Sbjct: 118 NIEKASRVMEILESHTE-PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYN 176
Query: 260 TLVSNLRNAGKLAEAHEVIRHMV 282
++ +L N KL A +V+ ++
Sbjct: 177 IMIGSLCNRRKLGLALKVLDQLL 199
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 126/273 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI GL + E +P +YNAI++ L +Y + + +M
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G +PD TYN ++ R + + EM R G PD +++ L+ V +
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL MK+ G P + +T LM G R GN+ DEM +GC+ DV+ Y +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ L A LFD M+ +G LP+ +T+ ++I G C G +A ++ M R
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + YNTL+ G++ +A E+ M+ +
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 275
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+N L+ C A+++ ++ + P S+++++
Sbjct: 62 MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVV---PDLVSFSSLMAVFSR 118
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ M G PD + Y ++M R G + + ++ DEM G D
Sbjct: 119 NRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 178
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +L+ L K A L + M E G P FTTL+ G + GN+ F M
Sbjct: 179 YNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMT 238
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PD+V Y +I + GE+EKA +L+DGMI++ PN TY +I +C G
Sbjct: 239 QRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVS 298
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + M +G P + NT++ +G ++A E + M+ KG
Sbjct: 299 EAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKG 346
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 118/234 (50%), Gaps = 4/234 (1%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAK 90
F K F P Y ++H R ++E + +M ++G D++ YN ++
Sbjct: 129 FRDMKKFGLVPDNVIYTVLMHGY--CRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 186
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ L +L DEM G PDF+T+ L+H + AL+L M + P +
Sbjct: 187 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 246
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + TL+DG + G ++ +D M ++ P+ + Y ++I +Y + G + +A L+D
Sbjct: 247 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 306
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
MI KG P + T N++I+G+C +G +A + M ++G P+ + YNTL+++
Sbjct: 307 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 101/206 (49%)
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
++TYN ++ A R G L++ +++ M G P TYN +++ L K + A +L
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M +G P + TL+ R N K F EM +G +PD+V ++ ++ +
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
L++A F M G +P+ Y ++ G+C G EA + EM +GC + + YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
T+++ L L +A ++ MVE+G
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERG 206
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 85/176 (48%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ + A ++N M + G PS+ + +++GL + G K EM
Sbjct: 3 TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
N G PD Y ++ +A+++F M+ +G +P++ +++S++ F
Sbjct: 63 LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D+A ++M+ G P+ ++Y L+ G + EA ++ M+E+G + +++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIA 178
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 60/108 (55%)
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V Y +I +Y G LE+A ++ + M KG P++FTYN++I G C G++ A ++
Sbjct: 1 MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM + G +P+ YNTL+ +EA E+ M+ +G LVS
Sbjct: 61 EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVS 108
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 1/164 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G TF LI + G K + F N +P +YN ++ + +
Sbjct: 202 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 261
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ M P+ +TY I++ A +G + + RL D M G P T N
Sbjct: 262 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 321
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM-DGLSRA 163
++ + A L M G P + + TL+ DG R+
Sbjct: 322 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINDGKRRS 365
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 152/326 (46%), Gaps = 47/326 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G P + T N LI C G++ A ++V+ ++ L R +YNA++ LG
Sbjct: 479 LLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRI---TYNALI---LG 532
Query: 58 IRQYKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+E + ++M+ G PDI TYN ++ +GKLD +L DE SG +
Sbjct: 533 FCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISN 592
Query: 115 FHTYNILLHVLGKGDK-----------------------------------PLAALNLLN 139
HTY I++ K ++ AAL LL
Sbjct: 593 IHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLE 652
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
+MK G P+ +++L+ G+ G ++ K+ DEM +G +P+VVCYT +I Y G
Sbjct: 653 NMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLG 712
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+++ A+ + MI+ PN FTY MI G+C G ++A ++ +M+ G P+ + YN
Sbjct: 713 QMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYN 772
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
L + A + A +V M +G
Sbjct: 773 VLTNGFCKANDMDNAFKVCDQMATEG 798
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 131/283 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ F + +L+C + G + E + + K + NA++H L G +
Sbjct: 444 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M + G D +TYN ++ GK++ RL +EM + G PD +TYN
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L K A+ L + K G ++ + +M+G +A ++ + F+E+ +K
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKK 623
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + Y ++I ++ G + A L + M +KG LPN TY+S+I G C G ++A
Sbjct: 624 MELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAK 683
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ EM G PN + Y L+ G++ A M+
Sbjct: 684 HLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMIS 726
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + N +L +L+ +++ V++ MS EG PD+ ++ V+ A + GK++ L
Sbjct: 207 PSLKTCNFLLSSLVKANEFEKCCEVFRVMS-EGACPDVFSFTNVINALCKGGKMENAIEL 265
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+M + G SP+ TYN +++ L + + A L M G P++ + L++GL +
Sbjct: 266 FMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIK 325
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
D + DEM G P+VV + +I Y G +E A + D MI+K P T
Sbjct: 326 LNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVT 385
Query: 223 YNSMIRGFCMAGKFDEACTMMKE-----------------------------------ME 247
S+++GFC + + + A ++E M
Sbjct: 386 LYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMML 445
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SR P+ L+ LV L GK EA E+ ++EKG
Sbjct: 446 SRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 105/223 (47%), Gaps = 1/223 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ ++ +G P + T N ++ + + + ++ + M G PD ++ +++ L
Sbjct: 196 VFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSE-GACPDVFSFTNVINALC 254
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
KG K A+ L M+++G P+V+ + +++GL + G LD ++M KG P++
Sbjct: 255 KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLK 314
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I I +K + D MI G PNV +N++I G+C G + A + M
Sbjct: 315 TYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVM 374
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
S+ P + +L+ + ++ A + ++ G IH
Sbjct: 375 ISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIH 417
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 36/320 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E P N++ C + G +E F+K + P +YN I++ L +
Sbjct: 235 MSEGACPDVFSFTNVINALC-KGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGR 293
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M+ +G P++ TY ++ +L D+ + +LDEM SGF+P+ +N
Sbjct: 294 LDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNN 353
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K AL + + M P+ + +LM G ++ ++ + +E+ + G
Sbjct: 354 LIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSG 413
Query: 181 CM-----------------------------------PDVVCYTVMITSYIAAGELEKAQ 205
P + T+++ G+ +A
Sbjct: 414 LSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEAT 473
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L+ ++ KG + T N++I G C AGK EA ++KEM RG + + YN L+
Sbjct: 474 ELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGF 533
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
N GK+ + M ++G
Sbjct: 534 CNEGKVEGCFRLREEMTKRG 553
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 126/306 (41%), Gaps = 37/306 (12%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N +I + G E K + +P +Y A+++ L+ + + +
Sbjct: 273 GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKV 332
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V +M G+ P+++ +N ++ ++G ++ ++ D M +P T L+
Sbjct: 333 NHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQG 392
Query: 125 LGKGDKPLAALNLLNHMKEVG-----------------------------------FDPS 149
K D+ A N L + G F PS
Sbjct: 393 FCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPS 452
Query: 150 VLHFTTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
L T L+ GL + G +L+A + +F + KG V +I AG+L +A +
Sbjct: 453 DLLLTMLVCGLCKDGKHLEATELWF-RLLEKGSPASKVTSNALIHGLCGAGKLPEASRIV 511
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ +G + TYN++I GFC GK + + +EM RG P+ YN L+ L N
Sbjct: 512 KEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNV 571
Query: 269 GKLAEA 274
GKL +A
Sbjct: 572 GKLDDA 577
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M +G P+ TY+ ++ +G ++ L+DEM + GF P+ Y L+ K
Sbjct: 652 ENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKL 711
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + M P+ +T ++DG + GN++ +M G +PDVV Y
Sbjct: 712 GQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTY 771
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
V+ + A +++ A + D M T+G + TY +++ G+
Sbjct: 772 NVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 3/143 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A+ +++ K F P Y A++ + Q E + +M
Sbjct: 673 VCNIGLVEDAKHLIDEMRKE---GFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNI 729
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ TY +++ +LG +++ + LL +M SG PD TYN+L + K + A
Sbjct: 730 HPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFK 789
Query: 137 LLNHMKEVGFDPSVLHFTTLMDG 159
+ + M G + +TTL+ G
Sbjct: 790 VCDQMATEGLPVDEITYTTLVHG 812
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G TFNILI C V A KV F + +P +YN++++ L
Sbjct: 227 MRADGICPNEVTFNILIDGFCKDKNVSAAMKV---FAEMNRQGVKPNVVTYNSLINGLCN 283
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + QM + P+I+T+N ++ + + Q L D+M + G +P+ T
Sbjct: 284 NGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTT 343
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ K + A L M G P V + L+ GL R G+L+A + EM
Sbjct: 344 YNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMD 403
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K D++ Y ++I S GE++KA L D M KG P+ TYN+MI G+C G
Sbjct: 404 TKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLR 463
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +ME G N YN L+ KL +A+ ++ M+EKG
Sbjct: 464 AALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKG 511
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 128/258 (49%), Gaps = 3/258 (1%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F ++ + + S N ++ L+ + + +E+VY++M P ++++NIV+
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFD 147
++GKL++ ++++M G S + TYN L+ +GK K A +L M+ G
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P+ + F L+DG + N+ A F EM +G P+VV Y +I G++ +A L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
D M+ PN+ T+N+++ GFC +A + +M +G PN YN L+
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353
Query: 268 AGKLAEAHEVIRHMVEKG 285
+ +A + R M+ KG
Sbjct: 354 DENMEDAFALYRIMLGKG 371
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 123/272 (45%), Gaps = 6/272 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G+V A + ++ + S L +P ++NA+L+
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL---KPNIITHNALLNGFCK 318
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K ++ M +G P++ TYNI++ A + ++ L M G PD T
Sbjct: 319 NKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVST 378
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + AA NL++ M ++ + L+D L G + DEM
Sbjct: 379 YNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMC 438
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P + Y MI Y G L A +L M G+L NV TYN +I+GFC K +
Sbjct: 439 RKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLE 498
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+A ++ EM +G PN + Y + + G
Sbjct: 499 DANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+Q LL G S F + +IL+ K + + G SV L
Sbjct: 76 EQTQILLSVSGDS-FCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPL 134
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
M GL + G + ++ + EM + P ++ + ++I G+L KA D+ + M +G
Sbjct: 135 MSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGV 194
Query: 217 LPNVFTYNSMIRGFCMAGKFD---EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
NV TYN++I G+C GK +A ++KEM + G PN + +N L+ ++
Sbjct: 195 SANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSA 254
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A +V M +G ++V+
Sbjct: 255 AMKVFAEMNRQGVKPNVVT 273
>gi|297834714|ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
Length = 1429
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 129/244 (52%), Gaps = 2/244 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N +I G GLA + FI+ +L F P +YN++L+A R + ++ VYQQM
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDK 130
G+ D +TYN ++ + G+LD +L +M G SG +PD TY +L+ LGK ++
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ A L++ M +VG P++ ++ L+ G ++AG + + F M G PD + Y+V
Sbjct: 454 SVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR- 249
M+ + E KA L+ MI+ G P+ Y MI G + D+ +++ME
Sbjct: 514 MLDVLLRGNETRKAWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEELC 573
Query: 250 GCNP 253
G NP
Sbjct: 574 GMNP 577
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 1 MIEN-GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+ N G A T+N L+ C V+ F + +P +YNA++
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
E ++ ++ +G++PD +TYN ++ A R ++ + +M + GF D TYN
Sbjct: 347 LAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++H+ GK + AL L MK + G +P + +T L+D L +A EM +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLD 466
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G P + Y+ +I Y AG+ E+A+D F M+ G P+ Y+ M+ + +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + ++M S G P+ +Y ++ L + + + IR M E
Sbjct: 527 AWVLYRDMISDGHTPSHSLYELMILGLMKENRSDDVQKTIRDMEE 571
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 114/258 (44%), Gaps = 1/258 (0%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
VVE + RP +YN +L A + V++ M PD+ TYN ++
Sbjct: 281 VVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMIS 340
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
R G + RL E+ GFSPD TYN LL+ + + M+++GF
Sbjct: 341 VYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMAN-KGCMPDVVCYTVMITSYIAAGELEKAQDL 207
+ + T++ + G LD + +M G PD + YTV+I S A +A L
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAAL 460
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
M+ G P + TY+++I G+ AGK +EA M G P+ L Y+ ++ L
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLR 520
Query: 268 AGKLAEAHEVIRHMVEKG 285
+ +A + R M+ G
Sbjct: 521 GNETRKAWVLYRDMISDG 538
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-------PDILTYNIVMCA 89
+ N R + + ++ A+LG+ L W + ++ E + + YN +M
Sbjct: 179 EWLNLRHWHSPNARMVAAILGV----LGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV 234
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK--GDKPLAALNLLNHMKEVGFD 147
R GK + LLD M + G PD ++N L++ K G P + LL+ ++ G
Sbjct: 235 YSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDMVRNSGLR 294
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + + TL+ SR NL+ F++M C PD+ Y MI+ Y G +A+ L
Sbjct: 295 PDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F + KG P+ TYNS++ F ++ + ++M+ G + + YNT++
Sbjct: 355 FIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 268 AGKLAEAHEVIRHM 281
G+L A ++ + M
Sbjct: 415 QGQLDLALQLYKDM 428
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 47 SYNAILHALL--GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
S+N +++A L G L+ + + + G PD +TYN ++ A R L+ ++ +
Sbjct: 262 SFNTLINARLKSGGLTPNLVVELLDMVRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFE 321
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M PD TYN ++ V G+ A L ++ GF P + + +L+ +R
Sbjct: 322 DMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFIELELKGFSPDAVTYNSLLYAFARER 381
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI-TKGQLPNVFTY 223
N + K + +M G D + Y +I Y G+L+ A L+ M G+ P+ TY
Sbjct: 382 NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITY 441
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+I A + EA +M EM G P Y+ L+ AGK EA + M+
Sbjct: 442 TVLIDSLGKANRSVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR 501
Query: 284 KG 285
G
Sbjct: 502 SG 503
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL--DQFHRLLDE 105
YNA++ ++ + + M G PD++++N ++ A+ + G L + LLD
Sbjct: 228 YNAMMGVYSRSGKFSKAQELLDAMRQRGCVPDLISFNTLINARLKSGGLTPNLVVELLDM 287
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ SG PD TYN LL + A+ + M+ P + + ++ R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLEGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ F E+ KG PD V Y ++ ++ EK ++++ M G + TYN+
Sbjct: 348 AAEAERLFIELELKGFSPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 226 MIRGFCMAGKFDEACTMMKEMES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I + G+ D A + K+M+ G NP+ + Y L+ +L A + EA ++ M++
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRSVEAAALMSEMLDV 467
Query: 285 G 285
G
Sbjct: 468 G 468
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 138/331 (41%), Gaps = 46/331 (13%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNF--RPFKNSYNAILHALLGIRQYKLIE 65
+ ++ ++ C G A +VV + ++K F+F P Y I+ A ++ ++ E
Sbjct: 717 SVCKSMVVVYCKLGFPETAYQVVNQ-AETKGFHFACSPM---YTDIIEAYGKLKLWQKAE 772
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V + G PD+ T+N +M A G ++ + + M R G SP + N LLH L
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTMMRDGPSPTVESINKLLHAL 832
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ ++ ++++GF S ++D +RAGN+ + M G +P +
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTI 892
Query: 186 VCYTVMIT----------SYIAAGELEKAQ-------------------------DLFDG 210
Y +MI + I E+E+A ++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQR 952
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ G P+ TYN++I +C + +E ++M++M + G +P Y +L+S
Sbjct: 953 IKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKC 1012
Query: 271 LAEAHEVIRHMVEKG-----KYIHLVSKFKR 296
L +A ++ ++ KG + H + K R
Sbjct: 1013 LEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 9/281 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T R + ++I C V A +V ++ NF+ +N++L
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA---NFKVELAIWNSMLKMYTV 939
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I YK VYQ++ + G PD TYN ++ R + ++ + L+ +M G P T
Sbjct: 940 IEDYKKTVQVYQRIKESGLEPDETTYNTLIIMYCRDRRPEEGYSLMQQMRNLGLDPKLDT 999
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ GK A L + G + T+M +G+ + M
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G P + +++ SY ++G ++A+ + + Y+S+I + + +
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKNTEVELTTLPYSSVIDAYLRSKDYK 1119
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ EM+ G P+ ++ V R A E EV+
Sbjct: 1120 SGIERLLEMKKEGLEPDHRIWTCFV---RAASFSKEKSEVM 1157
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/258 (18%), Positives = 111/258 (43%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF + + +++ G +V + + K + P Y ++ L ++ +
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + +M + + ++ +N ++ + + ++ + SG PD TYN L+ +
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTVIEDYKKTVQVYQRIKESGLEPDETTYNTLIIM 971
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ +P +L+ M+ +G DP + + +L+ + L+ + F+E+ +KG D
Sbjct: 972 YCRDRRPEEGYSLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLD 1031
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y M+ +G KA+ L M G P + T + ++ + +G EA ++
Sbjct: 1032 RSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLS 1091
Query: 245 EMESRGCNPNFLVYNTLV 262
+++ L Y++++
Sbjct: 1092 NLKNTEVELTTLPYSSVI 1109
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 90/251 (35%), Gaps = 36/251 (14%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPD-----------------ILTYNIVMCAK 90
Y +LH + Y V+ ++ G P Y +V A+
Sbjct: 684 YETLLHCCVANEHYAEASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAE 743
Query: 91 YR----------------LGKLDQFHRLLDEMG---RSGFSPDFHTYNILLHVLGKGDKP 131
+ GKL + + +G +SG +PD T+N L+ +
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCY 803
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + N M G P+V L+ L G L+ +E+ + G +M
Sbjct: 804 ERARAIFNTMMRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLM 863
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ ++ AG + + ++ M G LP + Y MI C + +A M+ EME
Sbjct: 864 LDAFARAGNIFEVNKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANF 923
Query: 252 NPNFLVYNTLV 262
++N+++
Sbjct: 924 KVELAIWNSML 934
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/194 (19%), Positives = 81/194 (41%), Gaps = 11/194 (5%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF---- 153
+ ++ E+ SG P ++ V K P A ++N + GF HF
Sbjct: 699 EASQVFSELRLSGCEPSESVCKSMVVVYCKLGFPETAYQVVNQAETKGF-----HFACSP 753
Query: 154 --TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
T +++ + + + G PD+ + ++++Y G E+A+ +F+ M
Sbjct: 754 MYTDIIEAYGKLKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAECGCYERARAIFNTM 813
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G P V + N ++ C+ G+ +E +++E++ G + ++ AG +
Sbjct: 814 MRDGPSPTVESINKLLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 272 AEAHEVIRHMVEKG 285
E +++ M G
Sbjct: 874 FEVNKIYSSMKAAG 887
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 150/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +L + V+ ++ G P ++++N +M +LG L++ RL + M SG PD
Sbjct: 146 FCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M +E G Y
Sbjct: 326 DLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 136/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M++EM S G Y +++ G + ++++ M G +V+
Sbjct: 365 AEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
Length = 795
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 142/303 (46%), Gaps = 7/303 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR- 59
++E A + L+ G R V F + +P +YN + HA +
Sbjct: 175 ILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSV 234
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+K + + M ++G D TYN ++ R G + ++ DEM +GF PD T+N
Sbjct: 235 PWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFN 294
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL V GK K A+ +L M+ G PSV+ + +L+ + G L+ EM +
Sbjct: 295 SLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFR 354
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PDVV YT +I+ G+++ A + M+ G PN+ TYN++I+ + GKF E
Sbjct: 355 GMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEM 414
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSK 293
+ ++ S G P+ + +NTL+S G +E V + M E+ Y+ L+S
Sbjct: 415 MAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISS 474
Query: 294 FKR 296
+ R
Sbjct: 475 YSR 477
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 139/306 (45%), Gaps = 35/306 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G T+N LI C GL R+ + F + K F P K ++N++L R+
Sbjct: 246 MKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARK 305
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKY----------------------------- 91
++ V ++M + G P ++TYN ++ A
Sbjct: 306 HEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 365
Query: 92 ------RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
R+GK+D EM R+G SP+ TYN L+ + G K + + + ++ G
Sbjct: 366 LISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAG 425
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ P V+ + TL+ + G F EM G +P+ Y +I+SY G ++A
Sbjct: 426 YVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 485
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+++ MI G P++ TYN+++ G++++A + EM R C P+ L Y++L+
Sbjct: 486 EIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAY 545
Query: 266 RNAGKL 271
NA KL
Sbjct: 546 ANAKKL 551
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 141/319 (44%), Gaps = 41/319 (12%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G+ T+ LI + CG A ++ +R I++ ++ P ++YNA+L AL
Sbjct: 456 MKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIY---PDISTYNAVLSALAR 512
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL--------------- 102
+++ E ++ +M D PD L+Y+ ++ A KLD+ L
Sbjct: 513 GGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERIERHNWL 572
Query: 103 --------------------LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
E+ R S D + N ++ + GK +L+ M
Sbjct: 573 VKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVKKVEEVLSLMM 632
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E + S + +LM SR G+ + C+ E+ + G PD Y +I +Y G+++
Sbjct: 633 ENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMK 692
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A LF M G P++ TYN I+ + F+EA +++ + ++GC PN +N+++
Sbjct: 693 EASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSIL 752
Query: 263 SNLRNAGKLAEAHEVIRHM 281
G++ EA + ++
Sbjct: 753 QGYSRHGRMVEAKSFLSNL 771
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 115/251 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI + GL + +E + + +P +Y ++ L + + Y +M
Sbjct: 327 TYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEM 386
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +P++ TYN ++ GK + + D++ +G+ PD T+N LL V G+
Sbjct: 387 VRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLD 446
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ MK+ G+ P + +L+ SR G D + M G PD+ Y +
Sbjct: 447 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAV 506
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+++ G E+A+ LF M+ + P+ +Y+S++ + A K D+ T+ +++ +
Sbjct: 507 LSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIYAERI 566
Query: 252 NPNFLVYNTLV 262
+ + TLV
Sbjct: 567 ERHNWLVKTLV 577
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 135/320 (42%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G+ T+N L+ G+ GL +V F + K + P +++Y +++ + +
Sbjct: 425 GYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQA 484
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y++M + G PDI TYN V+ A R G+ +Q +L EM PD +Y+ LLH
Sbjct: 485 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHA 544
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL----SRAGNLDACKYFFDEMANKG 180
K L+ + + E + + L+ L ++ NL + F E+ +
Sbjct: 545 YANAKK----LDKMKTLSEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRR 600
Query: 181 CMPDVVCYTVMITSY-----------------------IAA------------GELEKAQ 205
C D+ M++ Y AA G+ EK +
Sbjct: 601 CSLDINVLNAMVSIYGKNKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCE 660
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ + + G P+ ++YN++I + G+ EA + EM+ G P+ + YN + +
Sbjct: 661 SILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSY 720
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
EA +++R++V +G
Sbjct: 721 VANIMFEEAIDLVRYLVTQG 740
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 8/177 (4%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH---FTTLMDGLSRAGNLDAC 169
P+ ++ + +G P A+ ++ +++ D ++ H T + +RAG L
Sbjct: 113 PETDLPAVVNTLASRGGHPGIAVAVVRAARDLHGDRALHHPRVLPTAIRVFARAGCLAEA 172
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ PD YT +++++ AG A +F M+ G P + TYN +
Sbjct: 173 SAILE----AAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHA 228
Query: 230 FC-MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+ + E ++ M+ G + YNTL+S R G EA +V M G
Sbjct: 229 YSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAG 285
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 144/288 (50%), Gaps = 7/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TFNIL+ C G++ + V +K + +P +Y +++
Sbjct: 258 MILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGI---KPNVVTYCSLMDGYCL 314
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + + MS G PDI +YNI++ ++ K+D+ L EM PD T
Sbjct: 315 VKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVT 374
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K K AL L++ M + G P ++ +++++D L + +D ++
Sbjct: 375 YNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLK 434
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P++ YT++I G LE A ++F+ ++ KG V TY MI GFC G FD
Sbjct: 435 DQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFD 494
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ +M+ C P+ + Y ++ +L + + +A E +R M+ +G
Sbjct: 495 EALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA-EKLREMITRG 541
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG----------------YAPDILTY 83
N P +N IL +L+ + Y + + QQM EG Y P+ +T+
Sbjct: 71 NPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITF 130
Query: 84 NIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ +C K ++ + FH D + GF D Y L+H L K + AAL+LL
Sbjct: 131 TTLIKGLCLKGQIHQALLFH---DNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRR 187
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+ P+V+ ++T++DG+ + +++ + EM +KG P+VV Y+ +I+ + G+
Sbjct: 188 VDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQ 247
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L+ A DLF+ MI + P+V+T+N ++ GFC GK E T+ M +G PN + Y +
Sbjct: 248 LKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 307
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ ++ +A ++ M ++G
Sbjct: 308 LMDGYCLVKEVNKAKSILYTMSQRG 332
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GE A ++ R + L +P Y+ I+ + + +Y +M +G
Sbjct: 172 LCKVGETRAALDLLRR-VDGNLV--QPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGI 228
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P+++TY+ ++ + +G+L L ++M PD +T+NIL+ K K
Sbjct: 229 SPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 288
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M + G P+V+ + +LMDG ++ K M+ +G PD+ Y ++I +
Sbjct: 289 VFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFC 348
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
++++A +LF M K +P+V TYNS+I G C GK A ++ EM RG P+ +
Sbjct: 349 KIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDII 408
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y++++ L ++ +A ++ + ++G
Sbjct: 409 TYSSILDALCKNHQVDKAIALLTKLKDQG 437
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 145/277 (52%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNIL+ C G V A+ + +K + +P +YN+++ + + + + +
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGI---KPDIVTYNSLMDGYCLVNEVNMAKSIL 338
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS G + +YNIV+ ++ +DQ +L EM P+ TYN L+ L K
Sbjct: 339 NTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKS 398
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL L++ M + G P ++ +++++D L + +D ++ ++G P++ Y
Sbjct: 399 GRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTY 458
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I G LE A+++F+ ++ KG V TY MI+GFC G FDEA +++ +M+
Sbjct: 459 TILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKD 518
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C P+ + Y ++ +L + + +A +++R M+ +G
Sbjct: 519 NSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRG 555
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 125/267 (46%), Gaps = 4/267 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
++ GF ++ LI +VG R +E R + KL Y+ I+ ++
Sbjct: 166 LVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVM--YSTIIDSMCKD 223
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ +Y +M + +I+TY+ ++ +GKL L ++M +PD +T+
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 283
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL+ K + A N L M + G P ++ + +LMDG ++ K + M++
Sbjct: 284 NILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSH 343
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G V Y ++I + +++A LF M K PNV TYNS+I G C +G+
Sbjct: 344 RGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISY 403
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNL 265
A ++ M RG P+ + Y++++ L
Sbjct: 404 ALELIDLMHDRGQQPDIITYSSILDAL 430
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 118/246 (47%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P + IL +L+ + Y + ++Q+M G P+ + +NI++ +LG +
Sbjct: 65 NPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFA 124
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L ++ + G+ PD T N + + ALN + + +GF + + TL++G
Sbjct: 125 FSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLING 184
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G A + K DVV Y+ +I S + A DL+ M+++ N
Sbjct: 185 LCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSN 244
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ TY+++I GFC+ GK +A + +M S NP+ +N LV G++ EA +
Sbjct: 245 IVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLA 304
Query: 280 HMVEKG 285
M+++G
Sbjct: 305 MMMKQG 310
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 126/263 (47%), Gaps = 6/263 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N L+ C EV +A+ ++ + SYN +++
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV---TATVRSYNIVINGFCK 362
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I+ ++++M + P+++TYN ++ + G++ L+D M G PD T
Sbjct: 363 IKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ +L L K A+ LL +K+ G P++ +T L+DGL + G L+ + F+++
Sbjct: 423 YSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLL 482
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG V YTVMI + + G ++A L M +P+ TY +I + D
Sbjct: 483 VKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEND 542
Query: 238 EACTMMKEMESRGCNPNFLVYNT 260
+A +++EM +RG +FL Y +
Sbjct: 543 KAEKLLREMITRGLLYSFLEYGS 565
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 133/295 (45%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+ T N I C G++ A ++ + F + SY +++ L
Sbjct: 131 ILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA---LGFHLDQVSYGTLINGLCK 187
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +++ + D++ Y+ ++ + + ++ L EM S + T
Sbjct: 188 VGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVT 247
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A+ L N M +P V F L+D + G + K M
Sbjct: 248 YSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMM 307
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD+V Y ++ Y E+ A+ + + M +G V +YN +I GFC D
Sbjct: 308 KQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVD 367
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A + KEM + PN + YN+L+ L +G+++ A E+I M ++G+ +++
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIIT 422
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 13/266 (4%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
+ L +K+ R IK NF N + LG+ + V ++ GY PD +T
Sbjct: 90 LSLFQKMEYRGIKPNFVNFNILINCF-----CQLGLIPFAF--SVLAKILKMGYEPDTIT 142
Query: 83 YNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
N + C K ++ + FH D++ GF D +Y L++ L K + AAL LL
Sbjct: 143 LNTFIKGFCLKGQIHQALNFH---DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLR 199
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
+ V+ ++T++D + + N++ + EM ++ ++V Y+ +I+ + G
Sbjct: 200 RVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVG 259
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L+ A LF+ M ++ P+V+T+N ++ FC G+ EA + M +G P+ + YN
Sbjct: 260 KLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYN 319
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
+L+ ++ A ++ M +G
Sbjct: 320 SLMDGYCLVNEVNMAKSILNTMSHRG 345
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 6/236 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T R++NI+I C V A K+ + ++F P +YN+++ L
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIF---PNVITYNSLIDGLCK 397
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M D G PDI+TY+ ++ A + +D+ LL ++ G P+ +T
Sbjct: 398 SGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYT 457
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ L KG + A N+ + G++ +V +T ++ G G D +M
Sbjct: 458 YTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ C+PD + Y ++I S E +KA+ L MIT+G L + Y S F A
Sbjct: 518 DNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAA 573
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 2/157 (1%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L N + P + F ++ L ++ + F +M +G P+ V + ++I
Sbjct: 54 AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G + A + ++ G P+ T N+ I+GFC+ G+ +A ++ + G +
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ + Y TL++ L G+ A E++R + GK + L
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRV--DGKLVQL 208
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/177 (18%), Positives = 78/177 (44%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
R +P + +L L K L+L M+ G P+ ++F L++ + G +
Sbjct: 63 RQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIP 122
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
++ G PD + I + G++ +A + D ++ G + +Y ++I
Sbjct: 123 FAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLI 182
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G C G+ A +++ ++ + + ++Y+T++ ++ + +A ++ MV +
Sbjct: 183 NGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSR 239
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G A K+++ + + + +P K +Y+ ++ L + Q + +QM + + PD
Sbjct: 363 GNADEAFKMIKEMVAAGV---QPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN+++ +R RLL EM +G SP+ +TY+I++H L + +P A +LL
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P+ + L+ G R GN+ FD+M +PD+ CY +I G
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+E++ F M +G LPN FTY+ +I G+ G + A +++ M G PN ++Y
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ + + + + + M+++G
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQG 624
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 134/273 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LI +VG + + F + + P + +Y+ ++H L + E + Q+M
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D G P+ + Y ++ + ++ +++ M G D Y IL+H L
Sbjct: 587 DTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNME 646
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AA +L+ +++ G P V +++L+ GL + + + DEM+ KG P++VCY +I
Sbjct: 647 AAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALI 706
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+G++ A+++F+ ++ KG +PN TY S+I G C G A + EM + G
Sbjct: 707 DGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGIT 766
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ VY+ L + +AG L +A +I M +G
Sbjct: 767 PDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 1/237 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++H L + V + G PD+ Y+ ++ + ++ +LDEM
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ G P+ YN L+ L K A N+ N + G P+ + +T+L+DG + G++
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 751
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
Y ++EM G PD Y+V+ T +AG+LE+A L + M +G ++ ++N+++
Sbjct: 752 NAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGH-ASISSFNNLV 810
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GFC GK E ++ + RG PN L ++S L AGKL+E H + + +K
Sbjct: 811 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 127/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N+LI G + + + P +Y A+++ L R+
Sbjct: 270 MRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRR 329
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +MS P+++ Y ++ R G D+ +++ EM +G P+ TY+
Sbjct: 330 SNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDN 389
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A LL M P + + +++G R + EM N G
Sbjct: 390 LVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAG 449
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V Y++MI +GE EKA DL + M TKG PN F Y +I G+C G AC
Sbjct: 450 ISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLAC 509
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M P+ YN+L+ L G++ E+ + M E+G
Sbjct: 510 EIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 115/245 (46%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +Y+ ++ A +R++ + V +M + G + +TYN+++ R G +++
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+M G PD TY L++ L K + A LL+ M P+V+ + L+DG
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R GN D EM G P+ + Y ++ G++++A L M+ P+
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN +I G +A ++ EME+ G +PN Y+ ++ L +G+ +A +++
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479
Query: 281 MVEKG 285
M KG
Sbjct: 480 MTTKG 484
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++I+I C GE A ++E L +P Y ++
Sbjct: 445 MENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL---KPNAFVYAPLISGYCR 501
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
L ++ +M+ PD+ YN ++ ++G++++ + +M G P+ T
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+H K +A L+ M + G P+ + + L++ ++ +++ F M
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 621
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G M D Y ++I + ++G +E A + G+ G +P+V Y+S+I G C +
Sbjct: 622 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 681
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ EM +G +PN + YN L+ L +G ++ A V ++ KG
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKG 729
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 139/299 (46%), Gaps = 8/299 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T++ L+ C G++ A ++++ ++ + RP +YN I+
Sbjct: 375 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRD---SHRPDTITYNLIIEGHFR 431
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +M + G +P++ TY+I++ + G+ ++ LL+EM G P+
Sbjct: 432 HHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFV 491
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + A + + M +V P + + +L+ GLS+ G ++ +F +M
Sbjct: 492 YAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQ 551
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+ Y+ +I Y+ G+LE A+ L M+ G PN Y ++ + + +
Sbjct: 552 ERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIE 611
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY--IHLVSKF 294
+ + K M +G + +Y L+ NL ++G + A V+ + + G +H+ S
Sbjct: 612 KVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 139/317 (43%), Gaps = 30/317 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G +N LI C G++ AR V + L P +Y +++
Sbjct: 690 MSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLV---PNCVTYTSLIDGSCK 746
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++Y +M G PD Y+++ G L+Q L++EM G + +
Sbjct: 747 VGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA-SISS 805
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD---------- 167
+N L+ K K L LL+ + G P+ L ++ GLS AG L
Sbjct: 806 FNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQ 865
Query: 168 ------ACKYF---FDEMANKGCMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
A ++F F +M N+G +P DVV MI + G L+KA L D ++ K
Sbjct: 866 QKTSESAARHFSSLFMDMINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKSAP 923
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+Y +++ C GK EA ++KEM+ RG P+ L++NL +G + E + V
Sbjct: 924 MGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNTV 983
Query: 278 IRHMVEKGKYIHLVSKF 294
+ +M+ K++ SKF
Sbjct: 984 LDNMLCH-KWLQKDSKF 999
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 122/221 (55%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ V+ +++ P ++++N ++ ++G LD+ RL +M +S PD TY+ L++
Sbjct: 260 QKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINA 319
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K +K A L + M + G P+ + FTTL+ G SR G +D K + +M +KG PD
Sbjct: 320 LCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPD 379
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V Y ++ + G+L A+++ DGMI +G P+ TY ++I GFC G + A + K
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRK 439
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ G + + ++ LV + G++ +A +R M+ G
Sbjct: 440 EMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 139/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ GFP FNIL+ C G + A+KV + K L +P S+N +++
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSL---QPTVVSFNTLINGYCK 287
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + QM PD+ TY+ ++ A + K+D H L DEM + G P+
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
Query: 118 YNILLH-----------------VLGKGDKP------------------LAALNLLNHMK 142
+ L+H +L KG +P +AA N+++ M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + +TTL+DG R G+++ EM G D V ++ ++ G +
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A+ M+ G P+ TY M+ FC G ++KEM+S G P+ + YN L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L G++ A ++ M+ G
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIG 550
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 130/280 (46%), Gaps = 2/280 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIE 65
P + L+ T ++G ++ F S+ F P + N +L ++ + I
Sbjct: 167 PMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGN-LLDRMMKLNPTGTIW 225
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
Y ++ D G+ ++ +NI+M + G + ++ DE+ + P ++N L++
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K L + M++ P V ++ L++ L + +D FDEM +G +P+
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND 345
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V +T +I + GE++ ++ + M++KG P++ YN+++ GFC G A ++
Sbjct: 346 VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDG 405
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M RG P+ + Y TL+ G + A E+ + M + G
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 17/256 (6%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+ ++H + L++ YQ+M +G PDI+ YN ++ + G L ++D M
Sbjct: 348 FTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
R G PD TY L+ +G AL + M + G + + F+ L+ G+ + G +
Sbjct: 408 RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ EM G PD V YT+M+ ++ G+ + L M + G +P+V TYN ++
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
G C G+ A ++ M + G P+ + YNTL+ E H RH +Y
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL----------EGHH--RHANSSKRY 575
Query: 288 IH-----LVSKFKRYK 298
I +V+ YK
Sbjct: 576 IQKPEIGIVADLASYK 591
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ T L+ C V A +V++ ++ ++P +YNAI+ +L
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE---IGYKPDIVAYNAIIDSLCK 202
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++++ +G P+++TY ++ + RLL +M + +P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ LL K K L A L M + DP ++ +++L++GL +D FD M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC+ DVV Y +I + A +E LF M +G + N TYN++I+GF AG D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +M+ G +P+ YN L+ L + G+L +A + M ++ + +V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP+ FN L+ ++ V+ K ++ R ++N +++ Q L
Sbjct: 82 FPSIV-DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ +M GY PD +T ++ R ++ L+D+M G+ PD YN ++ L
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + A + ++ G P+V+ +T L++GL + +M K P+V
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y+ ++ +++ G++ +A++LF+ M+ P++ TY+S+I G C+ + DEA M
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S+GC + + YNTL++ A ++ + ++ R M ++G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G+ +N +I + + + F + + RP +Y A+++ L +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M + P+++TY+ ++ A + GK+ + L +EM R PD TY+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L D+ A + + M G V+ + TL++G +A ++ F EM+ +G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + V Y +I + AG+++KAQ+ F M G P+++TYN ++ G C G+ ++A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M+ R + + + Y T++ + GK+ EA + + KG
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C A +++ IK K+ P +Y+A+L A ++ K++E ++++M
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKI---TPNVITYSALLDAF--VKNGKVLEAKELFEEMVRM 289
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
PDI+TY+ ++ ++D+ +++ D M G D +YN L++ K +
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L M + G + + + TL+ G +AG++D + FF +M G PD+ Y +++
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
GELEKA +F+ M + ++ TY ++IRG C GK +EA ++ + +G P+
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T++S L G L E + M ++G
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 140/272 (51%), Gaps = 8/272 (2%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RPF + +N +L A++ +++Y ++ + ++M G D+ T+NIV+
Sbjct: 74 SDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 133
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
++ +L +M + G+ PD T L++ + ++ A++L++ M E+G+ P ++ +
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
++D L + ++ FF E+ KG P+VV YT ++ + A L MI
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
K PNV TY++++ F GK EA + +EM +P+ + Y++L++ L ++ E
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDE 313
Query: 274 AHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A+++ MV KG Y L++ F + KR
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +++ ++ + ++++MS G + +TYN ++ ++ G +D+ +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SPD TYNILL L + AL + M++ D ++ +TT++ G+ + G +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F ++ KG PD+V YT M++ G L + + L+ M +G + N T +
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD- 510
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G + ++K+M S G P+ L
Sbjct: 511 -------GDITLSAELIKKMLSCGYAPSLL 533
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A+++ E ++ + P +Y+++++ L + ++ M +G D+
Sbjct: 274 GKVLEAKELFEEMVR---MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
++YN ++ + +++ +L EM + G + TYN L+ + A +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P + + L+ GL G L+ F++M + D+V YT +I G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+E+A LF + KG P++ TY +M+ G C G E + +M+ G N +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN----DC 506
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
+S+ G + + E+I+ M+ G L+ K
Sbjct: 507 TLSD----GDITLSAELIKKMLSCGYAPSLLKDIK 537
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M + PS++ F L+ + + D +M G D+ + ++I
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ ++ A + M+ G P+ T S++ GFC + +A +++ +M G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + YN ++ +L ++ +A + + + KG ++V+
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 150/306 (49%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +L + V+ ++ G P ++++N +M +LG L++ RL + M SG PD
Sbjct: 146 FCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL + M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 135/272 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E G R +E + +K FR ++ +L L+ ++ +KL+ Y++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ GY + +NI+M + + G++ + D + + G P ++N L++ K
Sbjct: 129 ECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLN 188
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
L N M+ G P V ++ L++GL + LD FDEM + G +P+ V +T +I
Sbjct: 189 EGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLI 248
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G ++ A +++ M+++ P++ TYN++I G C G +A ++ EM +G
Sbjct: 249 DGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLK 308
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL+ G L A E + M+++
Sbjct: 309 PDKITYTTLIDGSCKEGDLETAFEYRKRMIKE 340
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + KLD + L DEM +G P+ ++
Sbjct: 185 GDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + +EM+
Sbjct: 245 TTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M++EM S G P Y +++ G + ++++ M G +V+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG + +F LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 NGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGYVPSVV 417
>gi|302829725|ref|XP_002946429.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
gi|300268175|gb|EFJ52356.1| hypothetical protein VOLCADRAFT_103021 [Volvox carteri f.
nagariensis]
Length = 961
Score = 133 bits (335), Expect = 9e-29, Method: Composition-based stats.
Identities = 69/274 (25%), Positives = 138/274 (50%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +I CG R+ +E + + ++Y+A+++ + + L + VY+QM
Sbjct: 278 TYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVYKQM 337
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+EG +P+++TYNI++ + + ++ ++LD + + + TYN ++ K +P
Sbjct: 338 LEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKSGQP 397
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL + M G PS +T L+ + G ++ F +M +GC +V+ Y+ +
Sbjct: 398 EQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRGCERNVITYSSL 457
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I++ AG E A +LF M + PNV T+NS+I G +++A + ++M+++GC
Sbjct: 458 ISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGHWEKASELFEQMQTQGC 517
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y L++ G+ A + M +G
Sbjct: 518 KPDSITYCGLITAYERGGQWRRALKAFEQMQTQG 551
Score = 88.6 bits (218), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 89/172 (51%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +TY ++ G + AL L+ M+ G D +V ++ LM+ +A LD + +
Sbjct: 275 DLYTYTTMISQCGSHQQLRRALELVAEMRSRGIDCNVHTYSALMNVCIKANELDLAQDVY 334
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M +GC P++V Y ++I Y+ + E+A + D + + V TYN++I +
Sbjct: 335 KQMLEEGCSPNLVTYNILIDVYVKRCQWEEAVKVLDTLEKQAIQAEVRTYNTVISACNKS 394
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ ++A + ++M + G P+ Y L+S G++ +A E+ R M+ +G
Sbjct: 395 GQPEQALKVYEKMLAAGVKPSATTYTALISAYGKKGQVEKALEIFRDMIRRG 446
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 12/168 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G T++ LI C + G +E F K N +P ++N+++ A
Sbjct: 442 MIRRGCERNVITYSSLISACEKAGRWEMALELFSKMHKENCKPNVVTFNSLIAACSHGGH 501
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +++QM +G PD +TY ++ A R G+ + + ++M G PD +N
Sbjct: 502 WEKASELFEQMQTQGCKPDSITYCGLITAYERGGQWRRALKAFEQMQTQGCHPDAAVFNS 561
Query: 121 LLHVLGKGDKPLA---ALNLLNHMKEVGF---------DPSVLHFTTL 156
L+ VL + LA AL L G D +VL ++T+
Sbjct: 562 LMEVLWQSGVLLAQSKALQLWTLANRSGHFRIYTNSKQDSNVLQYSTV 609
Score = 41.2 bits (95), Expect = 0.53, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 6/100 (6%)
Query: 199 GELEKAQDLFDGMITK------GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
G L++A ++FD + L +++TY +MI + A ++ EM SRG +
Sbjct: 249 GYLKRAVEIFDWLRNLEPSHELSSLCDLYTYTTMISQCGSHQQLRRALELVAEMRSRGID 308
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N Y+ L++ A +L A +V + M+E+G +LV+
Sbjct: 309 CNVHTYSALMNVCIKANELDLAQDVYKQMLEEGCSPNLVT 348
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G A T+N LI C G++ A + +K + P ++YN ++HAL
Sbjct: 269 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM---PSVSTYNLLVHALFM 325
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M +G PD +TYNI++ R G + L +EM G P T
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++VL + ++ A +L + + G P V+ F ++DG GN++ EM
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD 445
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD V + ++ G++E+A+ L D M +G P+ +YN++I G+ G
Sbjct: 446 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIK 505
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEKG 285
+A + EM S G NP L YN L+ L G LAE E+++ MV KG
Sbjct: 506 DAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE--ELLKEMVNKG 553
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + T+ LI C G + A + ++ ++ L P +YN ++
Sbjct: 238 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV---PNAVTYNTLIDGYCNKGDL 294
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +M +G P + TYN+++ A + G++ + ++ EM + G PD TYNIL
Sbjct: 295 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 354
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + A +L N M G +P+ + +T+L+ LSR + F+++ ++G
Sbjct: 355 INGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 414
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDV+ + MI + A G +E+A L M K P+ T+N++++G C GK +EA
Sbjct: 415 SPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 474
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM+ RG P+ + YNTL+S G + +A V M+ G
Sbjct: 475 LLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ P++++YN ++ G ++ R+LD M G PD +TY L+ + K + A
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L + M E+G P+ + + TL+DG G+L+ + DEM KG MP V Y +++ +
Sbjct: 263 SGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHA 322
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G + +A D+ M KG +P+ TYN +I G+ G A + EM S+G P
Sbjct: 323 LFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPT 382
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y +L+ L ++ EA ++ ++++G
Sbjct: 383 HVTYTSLIYVLSRRNRMKEADDLFEKILDQG 413
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 146/349 (41%), Gaps = 53/349 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKL------------FNFRPFKNSY 48
++E T F+ L + + + +V ++ KL F+P SY
Sbjct: 152 VMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSY 211
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRL------------ 93
N I+H + + M +G PD TY + MC + RL
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 271
Query: 94 --------------------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G L++ DEM + G P TYN+L+H L +
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A +++ M++ G P + + L++G SR GN +EM +KG P V YT +I
Sbjct: 332 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIY 391
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+++A DLF+ ++ +G P+V +N+MI G C G + A ++KEM+ + P
Sbjct: 392 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPP 451
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
+ + +NTL+ GK+ EA ++ M +G Y L+S + R
Sbjct: 452 DEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGR 500
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 101/212 (47%), Gaps = 6/212 (2%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GKL + + M GF P+ +YN ++H A +L+ M+ G +P +
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+L+ G+ + G L+ FD+M G +P+ V Y +I Y G+LE+A D M+
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG +P+V TYN ++ M G+ EA M+KEM +G P+ + YN L++ G
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366
Query: 274 AHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A ++ M+ KG Y L+ R R
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G A T+NILI G A++ + + P +Y ++++ L +
Sbjct: 339 MRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 398
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + +++++ D+G +PD++ +N ++ G +++ LL EM R PD T+N
Sbjct: 399 MKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 458
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + K A LL+ MK G P + + TL+ G R G++ DEM + G
Sbjct: 459 LMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIG 518
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
P ++ Y +I E + A++L M+ KG P+ TY S+I G
Sbjct: 519 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 141/278 (50%), Gaps = 9/278 (3%)
Query: 14 NILIC-TCGEVGLARKVVE---RFIKS-KLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
N+LIC T +V + +E RF++ ++ P +YN ++ + + + +
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGK 127
+ M +G PD ++Y +M + ++ + L+ +M + G PD TYN L+H+L K
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D AL L +E GF L ++ ++ L + G + K +EM C PDVV
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM---DCPPDVVT 452
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT ++ + GE++KA+ L M T G PN +Y +++ G C GK EA MM E
Sbjct: 453 YTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSE 512
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+PN + Y+ ++ LR GKL+EA +V+R MV KG
Sbjct: 513 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKG 550
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 139/283 (49%), Gaps = 3/283 (1%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E+G T+N LI + A + + ++ FR K Y+AI+HAL ++ +
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL--CKEGR 433
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ E +++ PD++TY V+ RLG++D+ +LL M G P+ +Y LL
Sbjct: 434 MSE-AKDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALL 492
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ + + K L A ++N +E + P+ + ++ +M GL R G L EM KG
Sbjct: 493 NGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF 552
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P V +++ S G +A+ + + KG NV + ++I GFC + D A ++
Sbjct: 553 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 612
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M + + Y TLV L G++AEA E+++ M+ KG
Sbjct: 613 LDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKG 655
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
++ VM + R G+L ++L M R+G P+ N + V + ++ AL L M
Sbjct: 244 AFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM 303
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ VG P+V+ + ++ G ++ ++M +KGC+PD V Y ++ +
Sbjct: 304 QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRI 363
Query: 202 EKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +DL M + G +P+ TYN++I DEA +K+ + +G + L Y+
Sbjct: 364 VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSA 423
Query: 261 LVSNLRNAGKLAEAHEVIRHM 281
+V L G+++EA ++I M
Sbjct: 424 IVHALCKEGRMSEAKDLINEM 444
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ D Y +L VL K + +L MK G + F+ +M SRAG L
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M G P+++ I ++ A LEKA + M G +PNV TYN MIRG+
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
C + +EA ++++M S+GC P+ + Y T++ L ++ E ++++ M ++
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKE 376
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 103/205 (50%), Gaps = 6/205 (2%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+ P +Y+ I+H L R+ KL E V ++M +G+ P + N+++ + R G+ +
Sbjct: 516 WSPNSITYSVIMHGLR--REGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHE 573
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ ++E G + + + ++H + D+ AAL++L+ M + V +TTL+D
Sbjct: 574 ARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVD 633
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + G + +M +KG P V Y +I Y G+++ + + MI++ +
Sbjct: 634 TLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCR 693
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMM 243
+ YN +I C+ GK +EA T++
Sbjct: 694 TI--YNQVIEKLCVLGKLEEADTLL 716
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 2/139 (1%)
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
DP V + ++++ LS+ + M +G ++ ++ SY AG+L A
Sbjct: 206 DPMV--YYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALK 263
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+ M G PN+ N+ I F A + ++A ++ M+ G PN + YN ++
Sbjct: 264 VLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYC 323
Query: 267 NAGKLAEAHEVIRHMVEKG 285
+ ++ EA E++ M KG
Sbjct: 324 DLHRVEEAIELLEDMHSKG 342
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TF+IL+ C G V A+ V+ +K + +P +Y +++
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGI---KPDVVTYCSLMDGYCL 313
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++Q + ++ M+ G ++ +YNI++ ++ K+D+ L EM PD T
Sbjct: 314 VKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT 373
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K K AL L++ M + G + + +++D L + +D +M
Sbjct: 374 YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMK 433
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G PD+ YT++I G L+ AQ++F+ ++ KG V+TY MI+GFC FD
Sbjct: 434 DEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFD 493
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ +ME GC PN Y ++ +L + A +++R M+ +G
Sbjct: 494 KALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARG 541
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 140/269 (52%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+ A +++ R + KL +P YN I+ ++ ++ +Y +M +G
Sbjct: 171 LCKVGQTSAALQLLRR-VDGKLV--QPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGI 227
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD++TY+ ++ LGKL+ L ++M +PD +T++IL+ K + A N
Sbjct: 228 SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+L M + G P V+ + +LMDG ++ K F+ MA G +V Y +MI +
Sbjct: 288 VLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFC 347
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
++++A +LF M K +P+V TYNS+I G C +GK A ++ EM RG + +
Sbjct: 348 KIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKI 407
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN+++ L ++ +A ++ M ++G
Sbjct: 408 TYNSILDALCKNHQVDKAIALLTKMKDEG 436
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 128/257 (49%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
+V F + N P + IL +L+ I Y+ ++++M G A D++T+NI++
Sbjct: 40 LVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILIN 99
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+LG + + + G+ P+ T L+ L + AL+ + + +GF
Sbjct: 100 CFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHL 159
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ + + TL++GL + G A + K P+VV Y +I S + +A DL+
Sbjct: 160 NKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 219
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M++KG P+V TY+++I GFC+ GK ++A + +M S NP+ ++ LV
Sbjct: 220 SEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKE 279
Query: 269 GKLAEAHEVIRHMVEKG 285
G++ EA V+ M+++G
Sbjct: 280 GRVKEAKNVLAMMMKQG 296
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C + L R++ I S L F N ++ + H V+ + +GY
Sbjct: 71 CYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFS-------VFANILKKGYE 123
Query: 78 PDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
P+ +T + +C K ++ + FH D++ GF + Y L++ L K + AA
Sbjct: 124 PNAITLTTLIKGLCLKGQIHQALHFH---DKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L LL + P+V+ + T++D + + ++ + EM +KG PDVV Y+ +I+
Sbjct: 181 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISG 240
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ G+L A LF+ MI++ P+V+T++ ++ GFC G+ EA ++ M +G P+
Sbjct: 241 FCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPD 300
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y +L+ ++ +A + M + G
Sbjct: 301 VVTYCSLMDGYCLVKQVNKAKSIFNTMAQGG 331
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/317 (20%), Positives = 133/317 (41%), Gaps = 35/317 (11%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG + TFNILI ++G F + P + ++ L Q
Sbjct: 85 NGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQ 144
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ ++ G+ + + Y ++ ++G+ +LL + P+ YN ++
Sbjct: 145 ALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIID 204
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ K A +L + M G P V+ ++ L+ G G L+ F++M ++ P
Sbjct: 205 SMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINP 264
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA---------- 233
DV +++++ + G +++A+++ M+ +G P+V TY S++ G+C+
Sbjct: 265 DVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIF 324
Query: 234 -------------------------GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
K DEA + KEM + P+ + YN+L+ L +
Sbjct: 325 NTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKS 384
Query: 269 GKLAEAHEVIRHMVEKG 285
GK++ A +++ M ++G
Sbjct: 385 GKISYALKLVDEMHDRG 401
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G +++NI+I ++ + + F + N P +YN+++ L +
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M D G D +TYN ++ A + ++D+ LL +M G PD +TY I
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L KG + A N+ + G++ +V +T ++ G D +M + G
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG 506
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
C+P+ Y ++I S E + A+ L MI +G L
Sbjct: 507 CIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 69/153 (45%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D + ++ N + + P + F ++ L + EM G D+V +
Sbjct: 35 DDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTF 94
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I + G + +F ++ KG PN T ++I+G C+ G+ +A ++ +
Sbjct: 95 NILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVA 154
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G + N + Y TL++ L G+ + A +++R +
Sbjct: 155 LGFHLNKVCYGTLINGLCKVGQTSAALQLLRRV 187
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 142/292 (48%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFI----KSKLFNFRPFKNSYNAILH 53
M G T N L +C G++ AR V + K+ +F+++ N Y A
Sbjct: 312 MTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGY-ATKG 370
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L+ + + ++ M +G APD +N+++ A + G LD+ + +EM G P
Sbjct: 371 CLVDLTE------LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEP 424
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TY+ ++ L + K A+ N M + G PS+ + L+ G G+L K
Sbjct: 425 DVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLV 484
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M NKG PD+ C+ +I + G + AQ++FD I+ G PNV YN+++ G+C+
Sbjct: 485 LQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLV 544
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK + A + M S G PN +VY TLV+ G++ E + R ++ KG
Sbjct: 545 GKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKG 596
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 124/256 (48%), Gaps = 6/256 (2%)
Query: 36 SKLFNF------RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
++LFN P + +N ++ A ++ +M ++G PD++TY+ V+ A
Sbjct: 376 TELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAA 435
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
R+GK+D ++M G +P TY+ L+ L A +L+ M G P
Sbjct: 436 LCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPD 495
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ F +++ L + G + + FD + G P+V+ Y ++ Y G++E A +FD
Sbjct: 496 IGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFD 555
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M++ G PNV Y +++ G+C G+ DE ++ +E+ +G P+ +YN ++ L AG
Sbjct: 556 VMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAG 615
Query: 270 KLAEAHEVIRHMVEKG 285
+ A M E G
Sbjct: 616 RTVPAKVKFHEMTESG 631
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+N LI G ++ V K P + N+++ +L +
Sbjct: 277 MVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK 336
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V+ M+ +G DI +Y I++ G L L + M G +PD H +N+
Sbjct: 337 IKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNV 396
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K A + N M+E G +P V+ ++T++ L R G +D F++M ++G
Sbjct: 397 LIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQG 456
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P + Y +I + G+L KA+DL M+ KG P++ +N +I C G+ +A
Sbjct: 457 VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQ 516
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ S G +PN +VYNTL+ GK+ A V MV G
Sbjct: 517 NIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG 561
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 115/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN ++ ++ +M G +PD+ TYN V+ A + +D+ +
Sbjct: 214 PNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAI 273
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TYN L++ + A+ + M G P V+ +LM L +
Sbjct: 274 LRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCK 333
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + + FD MA KG D+ Y +M+ Y G L +LF+ M++ G P+
Sbjct: 334 HGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHI 393
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N +I+ + G D A + EM +G P+ + Y+T+++ L GK+ +A E M+
Sbjct: 394 FNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMI 453
Query: 283 EKG 285
++G
Sbjct: 454 DQG 456
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 118/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++YN +++AL R E + +QM D+G PD TYN ++ G+ + R+
Sbjct: 249 PDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRV 308
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+M G PD T N L+ L K K A ++ + M G + + +++G +
Sbjct: 309 SKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYAT 368
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L F+ M + G PD + V+I +Y G L++A +F+ M +G P+V T
Sbjct: 369 KGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVT 428
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+++I C GK D+A +M +G P+ Y+ L+ G L +A +++ M+
Sbjct: 429 YSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMM 488
Query: 283 EKG 285
KG
Sbjct: 489 NKG 491
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 7/257 (2%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD-ILTYNIV--MCAKYRLGKLD 97
P ++Y ++ + KL + Q+ G D I+ N++ +C R +
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTA--E 161
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD--PSVLHFTT 155
LL M G PD +Y I+L L K A LL M E G P+ + + T
Sbjct: 162 ALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNT 221
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++DG + G+++ F+EM +G PD+ Y ++ + A ++KA+ + M+ KG
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
LP+ +TYNS+I G+ G++ EA + K+M S+G P+ + N+L+++L GK+ +A
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341
Query: 276 EVIRHMVEKGKYIHLVS 292
+V M KG+ + S
Sbjct: 342 DVFDSMAMKGQKTDIFS 358
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 122/265 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G + FN+LI + G+ + F + + P +Y+ ++ AL I +
Sbjct: 382 MLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGK 441
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G AP I TY+ ++ G L + L+ +M G PD +N
Sbjct: 442 MDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNF 501
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + +G P+V+ + TLMDG G ++ FD M + G
Sbjct: 502 IINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAG 561
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y G +++ LF ++ KG P+ YN ++ G AG+ A
Sbjct: 562 IQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAK 621
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G + Y+ ++ L
Sbjct: 622 VKFHEMTESGIAMDRYTYSIVLGGL 646
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 91/190 (47%), Gaps = 3/190 (1%)
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
F+R+ G SP HTY IL+ + +P L + + G + + L+
Sbjct: 92 FNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLR 151
Query: 159 GLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ- 216
GL A +A M + GC+PDV Y +++ S + + +A +L M G
Sbjct: 152 GLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAV 211
Query: 217 -LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
LPN YN++I GF G ++AC + EM RG +P+ YN +V+ L A + +A
Sbjct: 212 CLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAE 271
Query: 276 EVIRHMVEKG 285
++R MV+KG
Sbjct: 272 AILRQMVDKG 281
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 13/283 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G FN +I C G V A+ + + I P YN ++
Sbjct: 487 MMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTIS---IGLHPNVMVYNTLMDGYCL 543
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + V+ M G P+++ Y ++ ++G++D+ L E+ G P
Sbjct: 544 VGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTL 603
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+LH L + + + A + M E G ++ ++ GL + D F E+
Sbjct: 604 YNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELH 663
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
D+ +MI +E+A+DLF + G +P+V TY+ M+ G +
Sbjct: 664 AMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVE 723
Query: 238 EACTMMKEMESRGC-NPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
EA M ME+ GC PN + N +V +L E E++R
Sbjct: 724 EADDMFSSMENAGCEQPNSQLLNHVVR------ELLEKREIVR 760
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 121/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 319 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 376
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 184 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 304 MKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 364 DAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVT 418
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 102/232 (43%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+++LI C ++ A ++ + + L P ++ ++
Sbjct: 197 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV---PNGVTFTTLIDGHCK 253
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD T
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 313
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A M + + +T L+ GL + G + EM
Sbjct: 314 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ G PD+ YT++I + G++ K L M G P+V TYN ++ G
Sbjct: 374 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G P T N +I C + A V+++ I + P +YN+++H L
Sbjct: 278 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM---PNCTTYNSLIHGYLS 334
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+ + ++MS +G P+++TY++++ + G + + + M +SG P+ T
Sbjct: 335 SGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAST 394
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LLH + N+ + M + G P F + + G LD F++M
Sbjct: 395 YGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQ 454
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G MPD+V YT +I G L+ A F MI G P++ T+N++I GF + GK++
Sbjct: 455 QQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWE 514
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A + EM RG PN +N+++ L GK+ EA ++ M G ++VS
Sbjct: 515 KAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVS 569
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+VG K F K P + N+++ L ++ E V QQM DE P+
Sbjct: 266 GDVG---KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNC 322
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
TYN ++ G+ + R+L EM R G P+ TY++L+ L K A + N
Sbjct: 323 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNS 382
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M + G P+ + +L+ G + GNL D M G P + + I +Y G
Sbjct: 383 MIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGR 442
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A F+ M +G +P++ Y ++I G C G+ D+A + +M G +P+ + +NT
Sbjct: 443 LDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNT 502
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ GK +A E+ M+++G
Sbjct: 503 LIHGFALHGKWEKAEELFYEMMDRG 527
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 140/302 (46%), Gaps = 9/302 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+++LI C G AR++ I+S +P ++Y ++LH
Sbjct: 348 MSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQS---GQKPNASTYGSLLHGYAT 404
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V M G P +NI + A + G+LD+ ++M + GF PD
Sbjct: 405 EGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVA 464
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K + A++ M + G P ++ F TL+ G + G + + F EM
Sbjct: 465 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMM 524
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P+V + MI G++ +A+ LFD M G PNV +YN+MI G+ +AG+
Sbjct: 525 DRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 584
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAG---KLAEAHEVIRHMVEKGKYIHLVSKF 294
E ++ +M G P + +NTL+ + + G + +I E G+ +++ F
Sbjct: 585 EVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLF 644
Query: 295 KR 296
+
Sbjct: 645 RE 646
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 131/296 (44%), Gaps = 22/296 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G A T+ L+ T G + V + +++ + RP ++ +N ++A
Sbjct: 383 MIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGM---RPGRHVFNIEIYAYCK 439
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M +G+ PDI+ Y V+ ++G+LD +M G SPD T
Sbjct: 440 CGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIIT 499
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+H K A L M + G P+V F +++D L + G + + FD M
Sbjct: 500 FNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMP 559
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+VV Y MI Y AGE+ + L D M+ G P T+N+++ G
Sbjct: 560 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG-------- 611
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
M S G P+ + TL+ + G++ + + R M+ K +++
Sbjct: 612 --------MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITE 659
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APDI T+ I++ G L+ L ++ ++G T+ LL L + A+N
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200
Query: 137 L-LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG--CMPDVVCYTVMIT 193
+ L M E+G P V +TTL+ GL + MA G C P+VV YT +I
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ KA LF M+ G PNV T NS+I G C D+A ++++M P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N YN+L+ ++G+ EA +++ M G+ ++V+
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 359
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 4/203 (1%)
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
+CA+ R D + +L M G +PD +Y LL L K A L++ M E G
Sbjct: 188 TLCAEKRTS--DAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDG 245
Query: 146 FD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
+ P+V+ +TT++ G + G++ F +M + G P+VV +I ++K
Sbjct: 246 DNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDK 305
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+ + MI + +PN TYNS+I G+ +G++ EA ++KEM G PN + Y+ L+
Sbjct: 306 AEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLID 365
Query: 264 NLRNAGKLAEAHEVIRHMVEKGK 286
L +G AEA E+ M++ G+
Sbjct: 366 CLCKSGLHAEAREIFNSMIQSGQ 388
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 42/325 (12%)
Query: 1 MIENGFPTTARTFNILICT-CGE--VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G A TF L+ T C E A +V R + P SY +L L
Sbjct: 170 IIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPE--LGCTPDVFSYTTLLKGLCA 227
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ + + M+++G P++++Y V+ ++ G + + + L +M G P+
Sbjct: 228 EKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNV 287
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T N ++ L K A +L M + P+ + +L+ G +G E
Sbjct: 288 VTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKE 347
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG------ 229
M+ G P+VV Y+++I +G +A+++F+ MI GQ PN TY S++ G
Sbjct: 348 MSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGN 407
Query: 230 -----------------------------FCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+C G+ DEA +M+ +G P+ + Y T
Sbjct: 408 LVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTT 467
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ L G+L +A M++ G
Sbjct: 468 VIDGLCKIGRLDDAMSRFCQMIDDG 492
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 132/285 (46%), Gaps = 7/285 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
N P T TF IL+ C G + AR+V E ++ + P +Y+A++ Q
Sbjct: 276 NVMPNTV-TFTILVDGLCKEGMILEARRVFEMMTENGV---EPDAYTYSALMDGYCLQSQ 331
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ M +G+AP + YNI++ + +L++ LL EM +PD TY+
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + +P A L M G P + ++ L+DGL + G+LD M
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P + Y ++I G+LE A++LF + KG P+V TY MI G G +EAC
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M ++M GC PN YN + G + A +I MV +G
Sbjct: 512 EMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRG 556
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF + T+ +I ++G ++ K + +P +YN ++ +L R+
Sbjct: 171 GFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEA 230
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ + +M D+G P+++TY+ ++ LG+L++ L +M P+ T+ IL+
Sbjct: 231 MYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDG 290
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K L A + M E G +P ++ LMDG +D + FD M KG P
Sbjct: 291 LCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPS 350
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y ++I + + L +A+ L M + P+ TY+++++GFC AG+ A + K
Sbjct: 351 VRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFK 410
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
EM S G P+ + Y+ L+ L G L EA +++ M E H+
Sbjct: 411 EMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHI 456
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 124/258 (48%), Gaps = 12/258 (4%)
Query: 36 SKLFNFRPFKNS--YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAK 90
++L RP +N +L +L+ + Y + + +QM P++ T I+ +C
Sbjct: 58 NQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHS 117
Query: 91 YRLGKLDQFHRLLDEMGRS---GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
R D H +G+ G P T+ LL+ L K + A+ L + + ++GF
Sbjct: 118 NR----DHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFA 173
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
PS++ +TT++ GL + G+ +M KGC PDVV Y +I S +A
Sbjct: 174 PSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF 233
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F M+ +G PNV TY+S++ GFC G+ +EA ++ K+M R PN + + LV L
Sbjct: 234 FSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293
Query: 268 AGKLAEAHEVIRHMVEKG 285
G + EA V M E G
Sbjct: 294 EGMILEARRVFEMMTENG 311
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T TF L+ C+ ++ A K+ + K F P +Y I+ L
Sbjct: 132 MFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGK---MGFAPSLITYTTIIKGLCK 188
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++M ++G PD++ YN V+ + + + ++ EM G P+ T
Sbjct: 189 IGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVT 248
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ +LH + A +L M P+ + FT L+DGL + G + + F+ M
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD Y+ ++ Y ++++AQ LFD M+ KG P+V YN +I G C + + +
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA T++ EM R P+ + Y+TL+ AG+ A ++ + M G
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 120/253 (47%), Gaps = 6/253 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ENG A T++ L+ C ++ A+K+ + + F P YN +++
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGK---GFAPSVRVYNILINGHCK 363
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + + +M D PD +TY+ +M + G+ +L EM G PD T
Sbjct: 364 SRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K A LL M+E +P + + L+ G+ G L+A + F +
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLF 483
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P VV YTVMI+ + G +A ++F M+ G LPN TYN I+GF G
Sbjct: 484 VKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPS 543
Query: 238 EACTMMKEMESRG 250
A +++EM RG
Sbjct: 544 NAVRLIEEMVGRG 556
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G + T++IL+ C G + A ++++ +SK+ P YN ++ +
Sbjct: 412 MCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKI---EPHICIYNILIQGMCN 468
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ + +G P ++TY +++ + G ++ + +M +G P+ T
Sbjct: 469 FGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCT 528
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
YN+ + + P A+ L+ M GF F L+D
Sbjct: 529 YNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ T L+ C V A +V++ ++ ++P +YNAI+ +L
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE---IGYKPDIVAYNAIIDSLCK 202
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++++ +G P+++TY ++ + RLL +M + +P+ T
Sbjct: 203 TKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVIT 262
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ LL K K L A L M + DP ++ +++L++GL +D FD M
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMV 322
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC+ DVV Y +I + A +E LF M +G + N TYN++I+GF AG D
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVD 382
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +M+ G +P+ YN L+ L + G+L +A + M ++ + +V+
Sbjct: 383 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 137/280 (48%), Gaps = 1/280 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP+ FN L+ ++ V+ K ++ R ++N +++ Q L
Sbjct: 82 FPSIV-DFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ +M GY PD +T ++ R ++ L+D+M G+ PD YN ++ L
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + A + ++ G P+V+ +T L++GL + +M K P+V
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y+ ++ +++ G++ +A++LF+ M+ P++ TY+S++ G C+ + DEA M
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDL 320
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S+GC + + YNTL++ A ++ + ++ R M ++G
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G+ +N +I + + + F + + RP +Y A+++ L +
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M + P+++TY+ ++ A + GK+ + L +EM R PD TY+
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L D+ A + + M G V+ + TL++G +A ++ F EM+ +G
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + V Y +I + AG+++KAQ+ F M G P+++TYN ++ G C G+ ++A
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M+ R + + + Y T++ + GK+ EA + + KG
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 140/272 (51%), Gaps = 8/272 (2%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
S + RPF + +N +L A++ +++Y ++ + ++M G D+ T+NIV+
Sbjct: 74 SDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCC 133
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
++ +L +M + G+ PD T L++ + ++ A++L++ M E+G+ P ++ +
Sbjct: 134 FQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAY 193
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
++D L + ++ FF E+ KG P+VV YT ++ + A L MI
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIK 253
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
K PNV TY++++ F GK EA + +EM +P+ + Y++LV+ L ++ E
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDE 313
Query: 274 AHEVIRHMVEKG------KYIHLVSKFKRYKR 299
A+++ MV KG Y L++ F + KR
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 7/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C A +++ IK K+ P +Y+A+L A ++ K++E ++++M
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKI---TPNVITYSALLDAF--VKNGKVLEAKELFEEMVRM 289
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
PDI+TY+ ++ ++D+ +++ D M G D +YN L++ K +
Sbjct: 290 SIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDG 349
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L M + G + + + TL+ G +AG++D + FF +M G PD+ Y +++
Sbjct: 350 MKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG 409
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
GELEKA +F+ M + ++ TY ++IRG C GK +EA ++ + +G P+
Sbjct: 410 LCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPD 469
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T++S L G L E + M ++G
Sbjct: 470 IVTYTTMMSGLCTKGLLHEVEALYTKMKQEG 500
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 8/210 (3%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +++ ++ + ++++MS G + +TYN ++ ++ G +D+ +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SPD TYNILL L + AL + M++ D ++ +TT++ G+ + G +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F ++ KG PD+V YT M++ G L + + L+ M +G + N T +
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSD- 510
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G + ++K+M S G P+ L
Sbjct: 511 -------GDITLSAELIKKMLSCGYAPSLL 533
Score = 87.0 bits (214), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 123/275 (44%), Gaps = 11/275 (4%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A+++ E ++ + P +Y+++++ L + ++ M +G D+
Sbjct: 274 GKVLEAKELFEEMVR---MSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
++YN ++ + +++ +L EM + G + TYN L+ + A +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P + + L+ GL G L+ F++M + D+V YT +I G+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+E+A LF + KG P++ TY +M+ G C G E + +M+ G N +
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKN----DC 506
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
+S+ G + + E+I+ M+ G L+ K
Sbjct: 507 TLSD----GDITLSAELIKKMLSCGYAPSLLKDIK 537
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 74/159 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L + M + PS++ F L+ + + D +M G D+ + ++I
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ ++ A + M+ G P+ T S++ GFC + +A +++ +M G P
Sbjct: 129 CFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP 188
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + YN ++ +L ++ +A + + + KG ++V+
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT 227
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 136/279 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI GF T+ LI +VG + + N +P Y +I+ +L RQ
Sbjct: 164 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 223
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M +G +P I TYN ++ A L + LL+EM S P+ ++
Sbjct: 224 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 283
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K + A ++++ M + G +P+V+ + LMDG +D FD M KG
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 343
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y+ +I Y +EKA LF+ M K +PN TY++++ G C G+ +A
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM +RG P+F+ Y L+ L +L EA +++
Sbjct: 404 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 442
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 131/250 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L ++ ++ Y + + QM G P+I T NI++ + L +L +
Sbjct: 66 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G P+ T+N L+ L K L+L + M GF P+V+ + TL++GL +
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G+ A M C PDVV YT +I S ++ +A +LF MI +G P++FT
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I C ++ ++ EM + PN ++++T+V L GK+ EAH+V+ M+
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305
Query: 283 EKGKYIHLVS 292
++G ++V+
Sbjct: 306 KRGVEPNVVT 315
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFN LI C G++G + ++ I F+P +Y +++ L +
Sbjct: 133 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE---GFQPNVVTYGTLINGLCKVGST 189
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M PD++ Y ++ + + ++ Q L EM G SP TYN L
Sbjct: 190 SAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSL 249
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L + LLN M P+V+ F+T++D L + G + D M +G
Sbjct: 250 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 309
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV Y ++ + E+++A +FD M+ KG P+V +Y+++I G+C + ++A
Sbjct: 310 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 369
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + PN + Y+TL+ L + G+L +A + MV +G+ VS
Sbjct: 370 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 420
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T NILI C +G A V+ + +K +P ++N ++ L +
Sbjct: 98 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK---LGHQPNIATFNTLIRGLCVEGKI 154
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ +M EG+ P+++TY ++ ++G RLL M + PD Y +
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A NL + M G PS+ + +L+ L +EM N
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MP+VV ++ ++ + G++ +A D+ D MI +G PNV TYN+++ G C+ + DEA
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M +G P+ + Y+TL++ ++ +A + M K
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 377
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N L+ C E+ A KV + + F P SY+ +++
Sbjct: 304 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCK---GFAPDVVSYSTLINGYCK 360
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ + +++++M + P+ +TY+ +M +G+L L EM G PDF +
Sbjct: 361 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 420
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K + A+ LL ++ DP + +T ++DG+ RAG L+A + F ++
Sbjct: 421 YCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLS 480
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+V YT+MI G L +A LF M KG PN TYN + RGF +
Sbjct: 481 SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 540
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++EM +RG + + LV L + G +++ ++
Sbjct: 541 RGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V A VV+ IK + P +YNA++ + V+ M +G+
Sbjct: 288 LCKEGKVMEAHDVVDMMIKRGV---EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APD+++Y+ ++ ++ ++++ L +EM R P+ TY+ L+H L + A+
Sbjct: 345 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 404
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P + + L+D L + LD + PD+ YT++I
Sbjct: 405 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMC 464
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG PNV+TY MI G C G EA + EM+ +G +PN
Sbjct: 465 RAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC 524
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN + + ++++ M+ +G
Sbjct: 525 TYNLITRGFLRNNETLRGIQLLQEMLARG 553
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
FH+ ++ + L D L++ N + HM PS+ FT L+ +++ +
Sbjct: 39 FHSKSLNFNTL---DDALSSFNRMLHMHP---PPSIADFTKLLISITKMKHYSTVLSLSH 92
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G P++ ++I S+ L A + ++ G PN+ T+N++IRG C+ G
Sbjct: 93 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 152
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K E + +M G PN + Y TL++ L G + A ++R M E+G
Sbjct: 153 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM-EQG 202
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 159/368 (43%), Gaps = 75/368 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--- 54
MI G + FN L+ C + A K++++ K + +P YN ++ +
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC---KPGYVVYNILIGSICS 425
Query: 55 ---LLGIRQYKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
L G ++L E Y +M G +++++ +C GK ++ ++++ EM
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCG---FGKFEKAYKVIHEMMG 482
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+GF PD TY+ ++ L + A L MK G P V +T L+D S+AG +
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ DEM GC P VV YT +I +Y+ A ++ A +LF+ MI KG PNV TY ++I
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602
Query: 229 GFCMAGKFDEACT----------------------------------------------- 241
G+C +G ++AC
Sbjct: 603 GYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662
Query: 242 ----MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+++ M GC PN +VY+ L+ A KL EA EV MVE+G Y L+
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLI 722
Query: 292 SKFKRYKR 299
+ + KR
Sbjct: 723 DRLFKDKR 730
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 5/266 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C +V AR ++E P Y+A++ + + V+ +M + GY
Sbjct: 655 LCKAHKVKDARDLLETMFVD---GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P++ TY+ ++ ++ +LD ++L +M + +P+ Y ++ L K K A
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYK 771
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M+E G P+V+ +T ++DG +AG +D C F EM +KGC P+ V YTV+I
Sbjct: 772 LMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A G L++A L + M +V +Y +I G+ +F + +++E+E G P L
Sbjct: 832 ATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPTIL 889
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMV 282
+Y L+ N AG+L A E+ + ++
Sbjct: 890 LYKVLIDNFVKAGRLEVALELHKEVI 915
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 28/321 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T T+ LI +V +A ++ E I F P +Y A++
Sbjct: 550 MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF---PNVITYTALIDGYCK 606
Query: 58 IRQYKLIEWVYQQMSDEGYAPDI----------------LTYNIVMCAKYRLGKLDQFHR 101
+ +Y +M + PD+ +TY ++ + K+
Sbjct: 607 SGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD 666
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL+ M G P+ Y+ L+ K K A + + M E G++P+V +++L+D L
Sbjct: 667 LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLF 726
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ LD +M C P++V YT MI + ++A L M KG PNV
Sbjct: 727 KDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVV 786
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +MI GF AGK D+ + +EM S+GC PNF+ Y L+++ G L EA+ ++ M
Sbjct: 787 TYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Query: 282 VEK------GKYIHLVSKFKR 296
+ Y ++ +KR
Sbjct: 847 KQTYWPKHVSSYCKVIEGYKR 867
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P +TYN ++ R KLD + EM G S D T L K
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVG 290
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K AL+L+ ++ F P+ + + ++ GL A + F + M + C+P+V Y
Sbjct: 291 KWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYR 347
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + +L + + + MI +G P+ +NS++ +C + F A ++K+ME
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407
Query: 250 GCNPNFLVYNTLVSNLRNAGKL 271
C P ++VYN L+ ++ + G+L
Sbjct: 408 ECKPGYVVYNILIGSICSGGEL 429
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 44/317 (13%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+ N+LI C GL +E + K F ++P + +YNA++ L + + V++
Sbjct: 206 GKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHR 265
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+MS+ G + D T A ++GK + L++ + F P+ YN ++ L +
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEAS 322
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD----- 184
A++ LN M+ P+V + L+ G L CK M +GC P
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 185 ------------------------------VVCYTVMITSYIAAGEL------EKAQDLF 208
V Y ++I S + GEL E A+ +
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M++ G + N S R C GKF++A ++ EM G P+ Y+ ++ L NA
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502
Query: 269 GKLAEAHEVIRHMVEKG 285
++ A + + M G
Sbjct: 503 SRVENAFFLFKEMKGTG 519
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 123/321 (38%), Gaps = 47/321 (14%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F +C G+ A ++E+ +F P YN ++ L ++ +M
Sbjct: 282 FAQALCKVGKWREALSLIEKE------DFVPNTILYNKMISGLCEASFFEEAMDFLNRMR 335
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
P++ TY I++C +L + R+L M G P + +N L+H K D
Sbjct: 336 STSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF-------------------- 172
A LL M++ P + + L+ + G L F
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455
Query: 173 ---------------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
EM G +PD Y+ +I A +E A LF M
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G +P+V+TY +I F AG +A + EM GC P + Y TL+ A K+
Sbjct: 516 KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV 575
Query: 272 AEAHEVIRHMVEKGKYIHLVS 292
+ A+E+ M+ KG + ++++
Sbjct: 576 SVANELFELMIAKGCFPNVIT 596
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 124/283 (43%), Gaps = 12/283 (4%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G+ T++ LI + L KV+ + +++ P Y ++ L
Sbjct: 706 MVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSC---APNIVIYTEMIDGLSK 762
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M ++G P+++TY ++ + GK+D+ L EMG G +P+F T
Sbjct: 763 VAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVT 822
Query: 118 YNILL-HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y +L+ H G A LL MK+ + V + +++G R L +E+
Sbjct: 823 YTVLINHCCATGHLD-EAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEV 879
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ--LPNVFTYNSMIRGFCMAG 234
G P ++ Y V+I +++ AG LE A +L +I+ Y S+I F A
Sbjct: 880 EKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYAS 939
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
K D A + +M G P+ + L+ L + EA ++
Sbjct: 940 KIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQL 982
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL L +K+ G+ P+ + + L+ RA LD + EM+ G D
Sbjct: 224 VALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFA 283
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G+ +A L + + +PN YN MI G C A F+EA + M S C
Sbjct: 284 QALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCI 340
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
PN Y L+ N +L ++ M+ +G Y
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCY 375
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 133/268 (49%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V R+ E F + P + +Y A+++ I Q + E + M G
Sbjct: 249 CRAGNV---RRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVG 305
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ + +N ++ R G +D+ + M R G D +TYN L L + ++ A L
Sbjct: 306 HNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKL 365
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M E G + + + +TTL+ S+ G++ + F +M KG P VV Y VMI YI
Sbjct: 366 LHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIK 425
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+G + +A+ M KG +P+V+TY +++ G C+ GK D A + +EM+ RG PN +
Sbjct: 426 SGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVA 485
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y L+S L G+ EA + +M+ G
Sbjct: 486 YTALISGLAKEGRSEEAFQFYDNMLAAG 513
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 106/197 (53%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L+ ++V+ + G++D RLLDEM R G + YN LL + +L
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKE 193
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G +P+V +T L+DGLS AG++ + FDE+ K DV Y+ +I +Y AG
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A ++FD + G PN TY ++I GFC G+ + A ++ +M+ RG N +++NT
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 261 LVSNLRNAGKLAEAHEV 277
++ G + +A E+
Sbjct: 314 MIDGYCRHGMVDKALEI 330
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 14/271 (5%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVE----RFIKSKLFNFRPFKNSYNAILHA 54
+ NG RT+ LI C G++ A ++ R + F + Y H
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGY--CRHG 322
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + + I+ V ++M G D+ TYN + C R+ +++ +LL M +G +
Sbjct: 323 M--VDKALEIKAVMERM---GIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESN 377
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+ +Y L+ + K + A L M+ G PSV+ + ++DG ++G++ + F
Sbjct: 378 YVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKK 437
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM KG +PDV Y ++ + G+++ A LF+ M +G PNV Y ++I G G
Sbjct: 438 EMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEG 497
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ +EA M + G P+ +Y+ LV +L
Sbjct: 498 RSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T T+ IL+ G KV F + K N Y+A+++A
Sbjct: 194 MESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGN 253
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ + G P+ TY ++ ++G+++ LL +M G + +N
Sbjct: 254 VRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNT 313
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + AL + M+ +G V + TL GL R ++ K M G
Sbjct: 314 MIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENG 373
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ V YT +I+ + G++ +A+ LF M KG P+V TYN MI G+ +G EA
Sbjct: 374 VESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAE 433
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
KEME +G P+ Y LV GK+ A + M ++G ++V+
Sbjct: 434 RFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVA 485
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G A +N L+ T +V E + + P +Y ++ L
Sbjct: 159 MPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGD 218
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+E V+ ++ + A D+ Y+ V+ A R G + + + DE +G P+ TY
Sbjct: 219 ISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGA 278
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K + AA LL M+ G + + F T++DG R G +D M G
Sbjct: 279 LINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMG 338
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
DV Y + +E A+ L M G N +Y ++I G EA
Sbjct: 339 IQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEAR 398
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ME +G P+ + YN ++ +G + EA + M +KG
Sbjct: 399 RLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEMEKKG 443
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 136/279 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI GF T+ LI +VG + + N +P Y +I+ +L RQ
Sbjct: 155 MIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 214
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M +G +P I TYN ++ A L + LL+EM S P+ ++
Sbjct: 215 VTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFST 274
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K + A ++++ M + G +P+V+ + LMDG +D FD M KG
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKG 334
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y+ +I Y +EKA LF+ M K +PN TY++++ G C G+ +A
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM +RG P+F+ Y L+ L +L EA +++
Sbjct: 395 ALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLK 433
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 131/250 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L ++ ++ Y + + QM G P+I T NI++ + L +L +
Sbjct: 57 PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G P+ T+N L+ L K L+L + M GF P+V+ + TL++GL +
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G+ A M C PDVV YT +I S ++ +A +LF MI +G P++FT
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I C ++ ++ EM + PN ++++T+V L GK+ EAH+V+ M+
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296
Query: 283 EKGKYIHLVS 292
++G ++V+
Sbjct: 297 KRGVEPNVVT 306
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 140/291 (48%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFN LI C G++G + ++ I F+P +Y +++ L +
Sbjct: 124 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGE---GFQPNVVTYGTLINGLCKVGST 180
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M PD++ Y ++ + + ++ Q L EM G SP TYN L
Sbjct: 181 SAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSL 240
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L + LLN M P+V+ F+T++D L + G + D M +G
Sbjct: 241 IHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 300
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV Y ++ + E+++A +FD M+ KG P+V +Y+++I G+C + ++A
Sbjct: 301 EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMY 360
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + PN + Y+TL+ L + G+L +A + MV +G+ VS
Sbjct: 361 LFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 411
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 133/283 (46%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T NILI C +G A V+ + +K +P ++N ++ L +
Sbjct: 89 GIPPNIYTLNILINSFCHLQRLGFAFSVLAKILK---LGHQPNIATFNTLIRGLCVEGKI 145
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ +M EG+ P+++TY ++ ++G RLL M + PD Y +
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A NL + M G PS+ + +L+ L +EM N
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MP+VV ++ ++ + G++ +A D+ D MI +G PNV TYN+++ G C+ + DEA
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M +G P+ + Y+TL++ ++ +A + M K
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRK 368
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 139/286 (48%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N L+ C E+ A KV + + F P SY+ +++
Sbjct: 295 MIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCK---GFAPDVVSYSTLINGYCK 351
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ + +++++M + P+ +TY+ +M +G+L L EM G PDF +
Sbjct: 352 IQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVS 411
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K + A+ LL ++ DP + +T ++DG+ RAG L+A + F ++
Sbjct: 412 YCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLS 471
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+V YT+MI G L +A LF M KG PN TYN + RGF +
Sbjct: 472 SKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETL 531
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++EM +RG + + LV L + G +++ ++
Sbjct: 532 RGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 130/269 (48%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+V A VV+ IK + P +YNA++ + V+ M +G+
Sbjct: 279 LCKEGKVMEAHDVVDMMIKRGV---EPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APD+++Y+ ++ ++ ++++ L +EM R P+ TY+ L+H L + A+
Sbjct: 336 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 395
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P + + L+D L + LD + PD+ YT++I
Sbjct: 396 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMC 455
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG PNV+TY MI G C G EA + EM+ +G +PN
Sbjct: 456 RAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGC 515
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN + + ++++ M+ +G
Sbjct: 516 TYNLITRGFLRNNETLRGIQLLQEMLARG 544
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
FH+ ++ + L D L++ N + HM PS+ FT L+ +++ +
Sbjct: 30 FHSKSLNFNTL---DDALSSFNRMLHMHP---PPSIADFTKLLISITKMKHYSTVLSLSH 83
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G P++ ++I S+ L A + ++ G PN+ T+N++IRG C+ G
Sbjct: 84 QMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEG 143
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K E + +M G PN + Y TL++ L G + A ++R M E+G
Sbjct: 144 KIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSM-EQG 193
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H
Sbjct: 92 TKEHKFRVPFDTC------RKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHN 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ L + V+ ++ G P ++++N +M ++G LD+ RL M SG PD
Sbjct: 146 FCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ +PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ + I
Sbjct: 128 LECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITK---WGLRPSVVSFNTLMNGYIKI 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M++EM S G P Y +++ G + ++++ M G ++V+
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 LMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 135/287 (47%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ + + L P +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 146/320 (45%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF + ++ ILI ++G R + + + ++ RP Y+ I+ L
Sbjct: 154 VLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTL 213
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y +M +G +PD++TY+I++ +G+L++ LL+EM +PD +TY I
Sbjct: 214 VDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTI 273
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A N+L M + + V+ ++TLMDG ++ K F M G
Sbjct: 274 LVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG 333
Query: 181 CMPDVVCYTVMI-------------------------------TSYI----AAGELEKAQ 205
PDV CY++MI TS I +G +
Sbjct: 334 VTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVW 393
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
DLFD M+ +GQ P+V TYN++I C G D A + +M+ + PN + L+ L
Sbjct: 394 DLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGL 453
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+L A E + ++ KG
Sbjct: 454 CKVGRLKNALEFFQDLLTKG 473
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+ C G+V A V+ +K+ N Y+ ++ + + + V+
Sbjct: 270 TYTILVDALCKEGKVKEAENVLAVMVKA-CVNLDVV--VYSTLMDGYCLVNEVNNAKRVF 326
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+ G PD+ Y+I++ ++ ++D+ L +E+ + PD TY L+ L K
Sbjct: 327 YTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKS 386
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +L + M + G P V+ + L+D L + G+LD F++M ++ P+V +
Sbjct: 387 GRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L+ A + F ++TKG NV TY MI G C G DEA + ME
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC + + + ++ + + +A +++R M+ +G
Sbjct: 507 NGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T++IL+ VG + ++ + L N P +Y ++ AL +
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K E V M D++ Y+ +M + +++ R+ M + G +PD H Y+I
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + ALNL + + P + +T+L+D L ++G + FDEM ++G
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y +I + G L++A LF+ M + PNV+T+ ++ G C G+ A
Sbjct: 404 QPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNAL 463
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ ++G N Y +++ L G L EA + M + G
Sbjct: 464 EFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 126/260 (48%), Gaps = 4/260 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSY--NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
A V +F + +F+ P +++ N IL +L+ +++Y +Y+QM PD T
Sbjct: 39 ADDAVSQF--NHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTL 96
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
NI++ G++ + ++ + G+ P+ T N L+ L K AL + +
Sbjct: 97 NIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLA 156
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
GF S + + L++G+ + G A + P+VV Y+++I +++
Sbjct: 157 QGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDE 216
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A DL+ M+ KG P+V TY+ ++ GFC+ G+ + A ++ EM NP+ Y LV
Sbjct: 217 AYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVD 276
Query: 264 NLRNAGKLAEAHEVIRHMVE 283
L GK+ EA V+ MV+
Sbjct: 277 ALCKEGKVKEAENVLAVMVK 296
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 139/288 (48%), Gaps = 12/288 (4%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ T N L +C G+V A + ++ + FR SY +++ + I +
Sbjct: 123 GYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQ---GFRLSGISYGILINGVCKIGET 179
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +++ P+++ Y++++ + +D+ + L EM G SPD TY+IL
Sbjct: 180 RAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSIL 239
Query: 122 LH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ ++G+ ++ A++LLN M +P + +T L+D L + G + + M
Sbjct: 240 VSGFCIVGQLNR---AIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVK 296
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
DVV Y+ ++ Y E+ A+ +F M G P+V Y+ MI G C + DE
Sbjct: 297 ACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDE 356
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A + +E+ + P+ + Y +L+ L +G+++ ++ M+++G+
Sbjct: 357 ALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQ 404
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 128/273 (46%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
FN ++ + V + + + +L P + N I++ Q L ++
Sbjct: 61 FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
GY P+ +T N +M GK+ + R D++ GF +Y IL++ + K +
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AA+ LL ++ P+V+ ++ ++D L + +D + EM KG PDVV Y++++
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + G+L +A DL + M+ + P+++TY ++ C GK EA ++ M N
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +VY+TL+ ++ A V M + G
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMG 333
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G ++I+I ++ + + F + N P +Y +++ L +
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M D G PD++TYN ++ A + G LD+ L ++M P+ +T+ I
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L K + AL + G+ +V +T +++GL + G LD M + G
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
C+ D V + +MI ++ E +KA+ L MI +G L
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 92/224 (41%), Gaps = 41/224 (18%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P +N ++ + + + L +M S PD+ T NI+++ + + A +
Sbjct: 55 TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
++ + ++G+ P+ + TLM GL C+
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGL--------------------CL-------------- 140
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G++++A D ++ +G + +Y +I G C G+ A +++ +E PN +
Sbjct: 141 -EGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVV 199
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
+Y+ ++ L + EA+++ MV KG Y LVS F
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGF 243
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 46/110 (41%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N D F+ M + P + ++ S + A L+ M P+ FT N
Sbjct: 38 NADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLN 97
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+I FC G+ A + + ++ G PN + NTL+ L GK+ EA
Sbjct: 98 IIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEA 147
>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
Length = 532
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 149/302 (49%), Gaps = 9/302 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G P T+++LI C C G AR+++ I+S+ P +Y +LH
Sbjct: 217 MSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSR---GNPNVATYGGLLHGYAT 273
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +NI + A + G+LD+ ++M + G PD +
Sbjct: 274 KGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIIS 333
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K + AA++ M + G P ++ FT L+ G S G + + F EM
Sbjct: 334 YGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMM 393
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P VV +T MI G++ +A+ LFD M PNV +YN++I G+ +AGK D
Sbjct: 394 DRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLD 453
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAG---KLAEAHEVIRHMVEKGKYIHLVSKF 294
E ++ +M S G PN + +NTL+ ++ + G +A + +I E G+ +++ F
Sbjct: 454 EVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLF 513
Query: 295 KR 296
+
Sbjct: 514 RE 515
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 119/237 (50%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N+I+ L ++ E V +QM D+ PD TYN ++ G+L + R+L +M R
Sbjct: 160 NSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSR 219
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G P+ TY++L+ L K A +LN M + +P+V + L+ G + G+L
Sbjct: 220 HGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVE 279
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
D M G PD + + I +Y+ G L++A F+ M +G +P++ +Y +MI
Sbjct: 280 MNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMID 339
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G+ D A + +M G +P+ +V+ L+ GK +A E+ M+++G
Sbjct: 340 GLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRG 396
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 131/286 (45%), Gaps = 12/286 (4%)
Query: 7 PTTARTFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLG-IRQYK 62
PTT T+ ILI C VG LA + + IK+ L R S+ IL L R
Sbjct: 11 PTTV-TYTILISCCCYVGCLNLAFAALGQIIKTGL---RANAISFTPILRTLCAEKRTSD 66
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG--FSPDFHTYNI 120
+ V + G PD+ +Y +++ K ++ L+ M G P+ +Y
Sbjct: 67 AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H K D+ A L M + G P V+ +++DGL + +D + +M +K
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MPD Y ++ Y+++G+L++A + M GQ PN TY+ +I C G EA
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAR 246
Query: 241 TMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ M +SRG NPN Y L+ G L E + +I MV+ G
Sbjct: 247 EILNSMIQSRG-NPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNG 291
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 112/243 (46%), Gaps = 27/243 (11%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---- 97
RP + +N ++A + + + +M +G PDI++Y ++ ++G+LD
Sbjct: 293 RPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMS 352
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
QF +++D+ G SPD + L+H K A L M + G P+V+ FTT++
Sbjct: 353 QFCQMIDD----GLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMI 408
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
D L + G + K FD M P+VV Y +I Y AG+L++ L D M++ G
Sbjct: 409 DKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLK 468
Query: 218 PN-------------------VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
PN V T N++I C G+ ++ T+ +EM S+ + +
Sbjct: 469 PNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTE 528
Query: 259 NTL 261
N +
Sbjct: 529 NII 531
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ A VV+ I + P +YNA++ + V+ M GY
Sbjct: 287 LCKEGKITEAHDVVDMMI---IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP++++YN ++ ++ ++D+ L +EM + P+ TYN L+H L + A+
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIA 403
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M G P + + L+D L + +LD + PD+ YT++I
Sbjct: 404 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMC 463
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+D+F + +KG PNV TY MI G C G DEA + EM+ GC+P+
Sbjct: 464 RAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGC 523
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+ L + A ++++ M+ +G
Sbjct: 524 TYNTITQGLLQNKEALRAIQLLQEMLARG 552
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 131/250 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N +L ++ +QY + + QM G PD+ T NI++ + L + +
Sbjct: 65 PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M GF P+V+ + TL++GL +
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN +A M C PDVV YT +I S ++ +A +LF M+ +G P++FT
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S+I C ++ T++ +M + P+ ++++T+V L GK+ EAH+V+ M+
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304
Query: 283 EKGKYIHLVS 292
+G ++V+
Sbjct: 305 IRGVEPNVVT 314
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 139/289 (48%), Gaps = 7/289 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P TA TF LI C G++G A + ++ I F+P +Y +++ L +
Sbjct: 135 PDTA-TFTTLIRGLCVEGKIGDALHLFDKMIGE---GFQPNVVTYGTLINGLCKVGNTNA 190
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + M PD++ Y ++ + + ++ + L +M G SPD TY L+H
Sbjct: 191 AIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 250
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + LLN M P V+ F+T++D L + G + D M +G P
Sbjct: 251 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 310
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+VV Y ++ + E+++A +FD M+ G PNV +YN++I G+C + D+A +
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 370
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+EM + PN + YNTL+ L + G+L +A + MV G+ L +
Sbjct: 371 EEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLAT 419
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T NILI C G A V+ + +K +P ++ ++ L +
Sbjct: 97 GIPPDVYTLNILINSFCHLNRPGFAFSVLAKILK---LGLQPDTATFTTLIRGLCVEGKI 153
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M EG+ P+++TY ++ ++G + RLL M + PD Y +
Sbjct: 154 GDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSI 213
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A NL + M G P + +T+L+ L ++M N
Sbjct: 214 IDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKI 273
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPDVV ++ ++ + G++ +A D+ D MI +G PNV TYN+++ G C+ + DEA
Sbjct: 274 MPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVK 333
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M G PN + YNTL++ ++ +A + M +K
Sbjct: 334 VFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQK 376
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 129/279 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI GF T+ LI +VG + + N +P Y +I+ +L RQ
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 222
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M +G +PDI TY ++ + L + LL++M S PD ++
Sbjct: 223 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A ++++ M G +P+V+ + LMDG +D FD M + G
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V+ Y +I Y ++KA LF+ M K +PN TYN+++ G C G+ +A
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAI 402
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM + G P+ Y L+ L L EA +++
Sbjct: 403 ALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLK 441
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+N L+ C E+ A KV + + + + P SYN +++
Sbjct: 303 MIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN---GYAPNVISYNTLINGYCK 359
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ +++++M + P+ +TYN +M +G+L L EM G PD T
Sbjct: 360 IQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLAT 419
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ LL ++ DP + +T ++DG+ RAG L+A + F ++
Sbjct: 420 YRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 479
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+V YT+MI G L++A LF M G P+ TYN++ +G +
Sbjct: 480 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEAL 539
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
A +++EM +RG + + LV L
Sbjct: 540 RAIQLLQEMLARGFSADVSTTTLLVEML 567
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 7/242 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ NG+ ++N LI C + A + E + +L P +YN ++H L
Sbjct: 338 MVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI---PNTVTYNTLMHGLCH 394
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ +M G PD+ TY I++ + LD+ LL + S PD
Sbjct: 395 VGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQI 454
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I++ + + + AA ++ +++ G P+V +T +++GL R G LD F EM
Sbjct: 455 YTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMD 514
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC PD Y + + E +A L M+ +G +V T ++ C K D
Sbjct: 515 GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLD 573
Query: 238 EA 239
++
Sbjct: 574 QS 575
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
FH+ ++ + L D L++ N + HM PS + F L+ +++ +
Sbjct: 38 FHSKSLNFNTL---DDALSSFNRMLHMHP---PPSTVDFNRLLTSIAKTKQYPTVFSLSN 91
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G PDV ++I S+ A + ++ G P+ T+ ++IRG C+ G
Sbjct: 92 QMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEG 151
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K +A + +M G PN + Y TL++ L G A ++R M E+G
Sbjct: 152 KIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM-EQG 201
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG T+N LI V + +E + P +Y + H L +R+
Sbjct: 384 MRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRR 443
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ + G P+ +TYN ++ R +L + +L EM ++ +PD TY
Sbjct: 444 LDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTT 503
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L +G++ AL + + M+ G+D + L GL+R GN F+ M ++G
Sbjct: 504 LIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRG 563
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
Y + I AGE+E+AQ L MI KG PN+ TYN+MI+GFC G+ D+A
Sbjct: 564 FAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDAD 623
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ M G P+ YN L+ N G+ +A ++ +E+G
Sbjct: 624 AMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERG 668
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 37/322 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRP--FKNSYNAILHALLGI 58
M G T + + + G G ++ +E F K + P +YN++L +L+
Sbjct: 242 MQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKN 301
Query: 59 RQYKLIEWVYQQMSDEG-----------------------------------YAPDILTY 83
++ + E ++ QM + G YAPD++TY
Sbjct: 302 KKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTY 361
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
IV+ A + ++Q + +L +M +G P+ +TYN L+ L +P AL L+ M++
Sbjct: 362 TIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQ 421
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P++ +T L GL + LD K F+E +G P+ V Y ++ Y L +
Sbjct: 422 GGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIE 481
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A D+ M P+ TY ++I+G + +A M EME++G + NF N L
Sbjct: 482 AMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILAR 541
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L G +A R M ++G
Sbjct: 542 GLARVGNHKDASIFYRRMKDRG 563
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 14/299 (4%)
Query: 1 MIENGFPTTARTFNILICTC----GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
MI NG T+ +I C ++ A K+++ I++ N+ P +Y ++ AL
Sbjct: 314 MINNGVSCNNLTYTSMI-QCFFLKEKMEDAMKLLDDMIQN---NYAPDVVTYTIVISALC 369
Query: 57 GIRQYKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ K+IE Y Q+M + G P+I TYN ++ + + ++ L+ M + G P
Sbjct: 370 ---KRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPP 426
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ +TY IL H L K + A + N G P+ + + TL++G R L
Sbjct: 427 NIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDIL 486
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM C PD V YT +I + +L A + D M KG N T N + RG
Sbjct: 487 KEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARV 546
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G +A + M+ RG + Y + L AG++ EA ++ M+ KG +L +
Sbjct: 547 GNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTT 605
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 2/242 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y ++ L + + ++ + Q+M +G + + + R G+ + +
Sbjct: 217 DAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFNL 276
Query: 106 MGRSGFSPDF--HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
M G+ P YN +L L K K A NL M G + L +T+++
Sbjct: 277 MKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLK 336
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
++ D+M PDVV YT++I++ +E+A + M G PN++TY
Sbjct: 337 EKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTY 396
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I+G C + +EA ++ ME G PN Y L L +L A E+ +
Sbjct: 397 NALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALA 456
Query: 284 KG 285
+G
Sbjct: 457 RG 458
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 88/215 (40%), Gaps = 37/215 (17%)
Query: 108 RSGFSPDFHTYNILLHVLGKGD-----------------------------------KPL 132
+ G+ + Y ++ +LG+ +
Sbjct: 209 QEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFK 268
Query: 133 AALNLLNHMKEVGFDPSVLH--FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+L N MKE+G++P ++ + +++ L + LD + F +M N G + + YT
Sbjct: 269 ESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTS 328
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI + ++E A L D MI P+V TY +I C ++A ++++M G
Sbjct: 329 MIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENG 388
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PN YN L+ L + EA E++ M + G
Sbjct: 389 CEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGG 423
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 39/256 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P T+ IL ++ + E F ++ +P + +YN +L+ R
Sbjct: 419 MEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGY--CRG 476
Query: 61 YKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+LIE + ++M PD +TY ++ + +L R+ DEM G+ +F T
Sbjct: 477 SRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTL 536
Query: 119 NIL-----------------------------------LHVLGKGDKPLAALNLLNHMKE 143
NIL +H L + A LL M
Sbjct: 537 NILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMIN 596
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G+ P++ + T++ G R G LD + M G PD Y ++I + G +
Sbjct: 597 KGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQD 656
Query: 204 AQDLFDGMITKGQLPN 219
A L+ + +G + N
Sbjct: 657 ADQLYATALERGVVLN 672
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 121/225 (53%), Gaps = 1/225 (0%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q +E P+ TY ++ + GKLDQ + LLDEM G P +N ++ L K
Sbjct: 19 QLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKA 78
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM-ANKGCMPDVVC 187
+ AL + P ++ F L+D L ++G ++ F+ M + C+P+VV
Sbjct: 79 GRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT +I G+L++A +L D M G PNV TY+ ++ G C AG+ D+ T+++EM
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG P+ ++YNTL++ L + +L EA E+++ M+ G Y +V+
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 13/295 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P N +I C G G A + +K P ++N ++ AL+
Sbjct: 56 MRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKC---TPDIITFNILVDALVK 112
Query: 58 IRQYKLIEWVYQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +++ M P+++TY V+ + GKLD+ LLD M +G P+
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY++L+ L K + LL M GF P V+ + TL++GL ++ LD M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P VV Y ++ + + ++++A L M +G P+V YN++I G C +
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNL------RNAGKLAEAHEVIRHMVEKG 285
D+A ++K+M + C P+ + Y+T++ L KL A E++ M + G
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 46/328 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI +G T T+N L+ C +V A ++++ + P +YN ++ L
Sbjct: 232 MIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER---GCPPDVINYNTVIAGLCR 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLG---KLDQFHRLLDEMGRSGF 111
+ + + +QM PD++TY+ + +C +R+ KL+ +L+ M ++G
Sbjct: 289 DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGC 348
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
P+ TY +++ L + K AL LL M + P + F+ ++ L ++ +LDA
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYK 408
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD---------------------- 209
F M+ + C P+ V Y +I GE++KA +F+
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCG 468
Query: 210 ------------GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GMI K P+ +Y ++IRG C +EA + + +E++G V
Sbjct: 469 VGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGV 528
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN LV+ L +L++AH V ++E G
Sbjct: 529 YNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GEV A +V E ++S FRP +YN++L L G+ + + + + M + PD
Sbjct: 436 GEVDKAVRVFELMVES----FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+Y ++ R+ +++ + L + GF+ + YN+L++ L K + A + N
Sbjct: 492 ASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANK 551
Query: 141 MKEVGF 146
+ E G+
Sbjct: 552 LIEAGY 557
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 35/314 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + FN L+ C G+ A K++++ + + ++P YN ++ +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMV---ICGYQPGYVVYNILIGGICS 58
Query: 58 IRQYK------LIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
L E Y +M + G ++ + +C +GK ++ + ++ EM
Sbjct: 59 TEDLPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCC---IGKFEKAYNVIREMMS 115
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
GF PD TY+ ++ L K A L MK G P V +TTL+D + G ++
Sbjct: 116 KGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQ 175
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ +FDEM GC P+VV YT +I +Y+ +L +A ++F+ M++ G +PN+ TY ++I
Sbjct: 176 ARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALID 235
Query: 229 GFCMAGKFDEACTMMKEMESRGCN-----------------PNFLVYNTLVSNLRNAGKL 271
G C AG+ ++AC + M++ + PN + Y LV L A K+
Sbjct: 236 GHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKV 295
Query: 272 AEAHEVIRHMVEKG 285
EA +++ M +G
Sbjct: 296 KEARDLLETMSLEG 309
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 134/305 (43%), Gaps = 23/305 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG T+ L+ +VGL + F + + P +Y A++HA L R+
Sbjct: 148 MKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRK 207
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK--------------------LDQFH 100
+++ M G P+I+TY ++ + G+ +D +
Sbjct: 208 LSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYF 267
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
R++D + P+ TY L+ L K K A +LL M G +P+ + + L+DG
Sbjct: 268 RIVDSELKE---PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGF 324
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G LD + F +M GC P+V Y+ +I L+ A + M+ PNV
Sbjct: 325 CKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNV 384
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
Y M+ G C GK DEA +M ME +GC PN + Y ++ AG++ E+++
Sbjct: 385 VIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQL 444
Query: 281 MVEKG 285
M KG
Sbjct: 445 MTSKG 449
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 142/309 (45%), Gaps = 17/309 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ GF + T++ +I K + F + K P +Y +L +
Sbjct: 113 MMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGL 172
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M +G AP+++TY ++ A + KL + + + + M +G P+ TY
Sbjct: 173 IEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTA 232
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFD-----------------PSVLHFTTLMDGLSRA 163
L+ K + A + MK D P+V+ + L+DGL +A
Sbjct: 233 LIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKA 292
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
+ + + M+ +GC P+ + Y +I + G+L++AQ++F M+ G PNV+TY
Sbjct: 293 HKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTY 352
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+S+I + D A ++ +M C PN ++Y +V L GK EA+ ++ M E
Sbjct: 353 SSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEE 412
Query: 284 KGKYIHLVS 292
KG Y ++V+
Sbjct: 413 KGCYPNVVT 421
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 22/298 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL------FNFR--------P 43
M+ NG T+ LI C GE A ++ R K+ FR P
Sbjct: 218 MLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEP 277
Query: 44 FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
+Y A++ L + K + + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 278 NVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVF 337
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M G SP+ +TY+ L+ L K + AL +L M E P+V+ +T ++DGL +
Sbjct: 338 TKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKV 397
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G D M KGC P+VV YT MI + AG +++ +L M +KG PN TY
Sbjct: 398 GKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITY 457
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN-----LRNAGKLAEAHE 276
+I C AG D+A +++EM+ + +Y ++ + + G LAE E
Sbjct: 458 RVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSE 515
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 6/228 (2%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VLGKGD 129
M EG P + +N ++ A R G ++LL +M G+ P + YNIL+ + D
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 130 KPLA-----ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
P A N M E+G + ++ L G + EM +KG +PD
Sbjct: 62 LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y+ +I A ++EKA LF M G P+V+TY +++ FC G ++A
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM+ GC PN + Y L+ KL+ A+E+ M+ G ++V+
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVT 229
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 126/306 (41%), Gaps = 38/306 (12%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
+VG + E F K P +Y++++ L ++ L V +M + AP+++
Sbjct: 326 KVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVV 385
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
Y ++ ++GK D+ +RL+ M G P+ TY ++ GK + L LL M
Sbjct: 386 IYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM 445
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM------------------------- 176
G P+ + + L++ AG LD +EM
Sbjct: 446 TSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVA 505
Query: 177 --------ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT-KGQLPNVFTYNSMI 227
+ G +P + Y ++I ++I AG LE A +L + + + N TY S+I
Sbjct: 506 SLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN--TYVSLI 563
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+A K D+A + +M RG P + L+ L GK EA ++ + +
Sbjct: 564 ESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMD-- 621
Query: 288 IHLVSK 293
IH V +
Sbjct: 622 IHWVQQ 627
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 143/279 (51%), Gaps = 7/279 (2%)
Query: 14 NILIC-TCGEVGLARKVVE---RFIKS-KLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
N+LIC T +V + +E RF++ ++ P +YN ++ + + + +
Sbjct: 279 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 338
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGK 127
M +G PD ++Y +M + ++ + L+ +M + G D TYN L+H+L K
Sbjct: 339 DDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTK 398
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVV 186
D AL L +E GF + ++ ++ L + G + K +EM +KG C PDVV
Sbjct: 399 HDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 458
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ + GE++KA+ L M T G PN +Y +++ G C GK EA MM
Sbjct: 459 TYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMS 518
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E + +PN + Y+ L+ LR GKL+EA +V+R MV KG
Sbjct: 519 EEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKG 557
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 140/284 (49%), Gaps = 1/284 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E+G T+N LI + A + + ++ FR K Y+AI+HAL +
Sbjct: 379 EHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMS 438
Query: 63 LIEWVYQQMSDEGY-APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M +G+ PD++TY V+ RLG++D+ +LL M G+ P+ +Y L
Sbjct: 439 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTAL 498
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L+ L + K L A ++N +E + P+ + ++ LM GL + G L EM KG
Sbjct: 499 LNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGF 558
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P V +++ S G +A+ + + KG NV + ++I GFC + D A +
Sbjct: 559 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 618
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M + + Y TLV L G++AEA E+++ M+ KG
Sbjct: 619 VLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKG 662
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
VM + R G+L ++L M R+G P+ N + V + ++ AL L M+ VG
Sbjct: 251 VMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVG 310
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P+V+ + ++ G ++ D+M +KGC+PD V Y ++ + + +
Sbjct: 311 IVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVR 370
Query: 206 DLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
DL M + G + + TYN++I DEA +K+ E +G + + Y+ +V
Sbjct: 371 DLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHA 430
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+++EA ++I M+ KG
Sbjct: 431 LCKEGRMSEAKDLINEMLSKG 451
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 10/193 (5%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ D Y +L VL K A +L MK G + F +M SRAG L
Sbjct: 206 YRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDAL 265
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M G P+++ I ++ A LEKA + M G +PNV TYN MIRG+
Sbjct: 266 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 325
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTL---------VSNLRN-AGKLAEAHEVIRH 280
C + +EA ++ +M S+GC P+ + Y T+ + +R+ K+A+ H ++R
Sbjct: 326 CDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRD 385
Query: 281 MVEKGKYIHLVSK 293
V IH+++K
Sbjct: 386 QVTYNTLIHMLTK 398
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 113/244 (46%), Gaps = 12/244 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G+ ++ L+ G + + E S+ + P +Y+ ++H L ++
Sbjct: 483 MHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLR--KE 540
Query: 61 YKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
KL E V ++M +G+ P + N+++ + R G+ + + ++E G + + +
Sbjct: 541 GKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNF 600
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++H + D+ AAL++L+ M + V +TTL+D L + G + +M +
Sbjct: 601 TTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLH 660
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDL---FDGMITKGQLPNVFTYNSMIRGFCMAGK 235
KG P V Y +I Y ++EK DL + MI + + + YN +I C GK
Sbjct: 661 KGIDPTPVTYRTVIHRYC---QMEKVDDLVAILEKMILRQKCKTI--YNQVIEKLCGLGK 715
Query: 236 FDEA 239
+EA
Sbjct: 716 LEEA 719
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 142/326 (43%), Gaps = 41/326 (12%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T N+LI C V A V+ + +K +P S+ ++ L Q
Sbjct: 104 GIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILK---LGCQPDTASFTTLIKGLCLEGQI 160
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M EG+ PD++ Y ++ + G RLL M + PD Y L
Sbjct: 161 GEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTL 220
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSV------------------------------- 150
+H L K + A NL + M G P++
Sbjct: 221 IHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKI 280
Query: 151 ----LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
+ TT++D L + G + D M G PDVV YT +I + E+++A
Sbjct: 281 MPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVK 340
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+FD M+ KG PNVF+YN++I G+C + D+A + +EM + PN + YNTL+ L
Sbjct: 341 VFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLC 400
Query: 267 NAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G+L +A + R MV G+ LV+
Sbjct: 401 HVGRLQDAIALFREMVACGQIPDLVT 426
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 128/269 (47%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A VV+ +S + P +Y A++ + V+ M +G
Sbjct: 294 LCKEGMVAQAHDVVDMMFQSGV---EPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGC 350
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP++ +YN ++ ++ ++D+ L +EM R P+ TYN L+H L + A+
Sbjct: 351 APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIA 410
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L M G P ++ + L+D L + +LD + PD+ YT++I
Sbjct: 411 LFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMC 470
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AGELE A+DLF + +KG PNV+TYN M G C G DEA + EM+ C+ +
Sbjct: 471 RAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGC 530
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+ + + A +++ M+ +G
Sbjct: 531 TYNTITQGFLRNNETSRAIQLLEEMLARG 559
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 135/282 (47%), Gaps = 6/282 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI GF + LI C G A +++ K N +P Y ++H+L
Sbjct: 170 MIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKG---NCQPDVVVYGTLIHSLCK 226
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
RQ ++ +M +G +P+I+T N ++ A LG+ + LL+EM S P+ +
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAIS 286
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L K A ++++ M + G +P V+ +T L+DG +D FD M
Sbjct: 287 LTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC P+V Y +I Y ++KA LF+ M + +PN TYN++I G C G+
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+A + +EM + G P+ + Y L+ L L +A +++
Sbjct: 407 DAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLK 448
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 7/281 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G T+ LI C E+ A KV + + P SYN +++
Sbjct: 310 MFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK---GCAPNVFSYNTLINGYCK 366
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + +++++M + P+ +TYN ++ +G+L L EM G PD T
Sbjct: 367 IERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVT 426
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ LL ++ DP + +T ++DG+ RAG L+ + F ++
Sbjct: 427 YRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLS 486
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+V Y +M G L++A LF M + TYN++ +GF +
Sbjct: 487 SKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETS 546
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAG-KLAEAHEV 277
A +++EM +RG + + LV L + G +EAH++
Sbjct: 547 RAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKL 587
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 35/243 (14%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P I+ + ++ + ++ + L +M G + +T N+L++ ++ A ++
Sbjct: 72 PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + ++G P FTTL+ GL G + + FD+M +G PDVV Y +I
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
Query: 198 AG-----------------------------------ELEKAQDLFDGMITKGQLPNVFT 222
G + +A +LF MITKG PN+ T
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
NS++ C G++ T++ EM PN + T+V L G +A+AH+V+ M
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311
Query: 283 EKG 285
+ G
Sbjct: 312 QSG 314
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 4/157 (2%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D L++ N + HM PS++ F ++ +++ +M + G +V
Sbjct: 56 DDALSSFNRMLHMHP---PPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTL 112
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+I S+ + A + ++ G P+ ++ ++I+G C+ G+ EA + +M
Sbjct: 113 NVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIW 172
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ ++Y TL++ L G + A ++R M EKG
Sbjct: 173 EGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM-EKG 208
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 10/140 (7%)
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F LHF TL D LS F+ M + P +V + ++TS
Sbjct: 45 FRSKYLHFNTLDDALSS----------FNRMLHMHPPPSIVDFAKILTSITKVKRYSTVL 94
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L M + G NV+T N +I FC + + A +++ ++ GC P+ + TL+ L
Sbjct: 95 SLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGL 154
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G++ EA + M+ +G
Sbjct: 155 CLEGQIGEALHLFDKMIWEG 174
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 142/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N +I + G+ + E +P SYN +L A L +
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + +M G P+ +TY+I++ + R G++D+ +L M +PD ++Y+
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A+ ++++M G P ++++ T++ L + GN + F+++ G
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+V Y MI++ + G+ +A + MI+KG P+ TYNS+I C G +EA
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +ME G P + YN ++ L ++ +A + M+EKG
Sbjct: 473 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 517
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 2/230 (0%)
Query: 57 GIRQYKLIEWVYQQMS--DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
G +K IE + M + PD+ YN V+ ++ +++ ++L+ M GF PD
Sbjct: 112 GFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPD 171
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYNI++ L K AL +L+ + P+V+ +T L++ G ++ +
Sbjct: 172 IVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLE 231
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM +G +PD+ Y +I G +E+A +L + +KG P+V +YN ++R F G
Sbjct: 232 EMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQG 291
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
K+DE ++ EM SRGC PN + Y+ L+S+L G++ EA V++ M+EK
Sbjct: 292 KWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 341
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 7/235 (2%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ ++GY PD++ ++ + +++ R++ E+ S PD YN ++ K ++
Sbjct: 94 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNR 152
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA +LN MK GF P ++ + ++ L L D++ CMP V+ YT+
Sbjct: 153 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTI 212
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I + I G + +A L + M+ +G LP+++TYN++IRG C G + A ++ + S+G
Sbjct: 213 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 272
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
C P+ + YN L+ N GK E +++ M +G Y L+S R+ R
Sbjct: 273 CKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 327
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 140/292 (47%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M GF T+NI+I C ++GLA KV+++ + L N P +Y ++ A +
Sbjct: 163 MKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLL---LDNCMPTVITYTILIEATIV 219
Query: 57 --GIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
GI + KL+E +M G PD+ TYN ++ + G +++ L+ + G P
Sbjct: 220 EGGINEAMKLLE----EMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKP 275
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YNILL K L+ M G +P+ + ++ L+ L R G +D
Sbjct: 276 DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL 335
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M K PD Y +I++ G L+ A + D MI+ G LP++ YN+++ C
Sbjct: 336 KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKN 395
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G ++A + ++ GC PN YNT++S L + G + A ++ M+ KG
Sbjct: 396 GNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 447
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 3/264 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C + A +V+ R K F P +YN ++ +L R+ L V Q+ +
Sbjct: 148 CKVNRIEAATQVLNRM---KARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCM 204
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++TY I++ A G +++ +LL+EM G PD +TYN ++ + K A L
Sbjct: 205 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 264
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ + G P V+ + L+ G D + EM ++GC P+ V Y+++I+S
Sbjct: 265 ITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 324
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +++A + MI K P+ ++Y+ +I C G+ D A +M M S GC P+ +
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 384
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHM 281
YNT+++ L G +A E+ +
Sbjct: 385 YNTILAALCKNGNANQALEIFNKL 408
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 119/239 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNA++ + + + V +M G+ PDI+TYNI++ + KL ++LD++
Sbjct: 139 AYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL 198
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
P TY IL+ A+ LL M G P + + ++ G+ + G +
Sbjct: 199 LLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMV 258
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + +KGC PDV+ Y +++ +++ G+ ++ + L M ++G PN TY+ +
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C G+ DEA +++K M + P+ Y+ L+S L G+L A ++ +M+ G
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNG 377
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
H++ F + H L++ +AG + YF + + NKG PDV+ T +I +
Sbjct: 60 HLQSYDFRET--HLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFK 117
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+EKA + + + + + P+VF YN++I GFC + + A ++ M++RG P+ + YN
Sbjct: 118 NIEKASRVMEILESHTE-PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYN 176
Query: 260 TLVSNLRNAGKLAEAHEVIRHMV 282
++ +L N KL A +V+ ++
Sbjct: 177 IMIGSLCNRRKLGLALKVLDQLL 199
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 143/291 (49%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ IL+ C GE A K++ R I+ + + RP Y+ I+ G
Sbjct: 106 VVAQGFQMDQVSYGILLNGLCKIGETRCAIKLL-RTIEDR--STRPDVVMYSTIID---G 159
Query: 58 IRQYKLIEW---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + KL++ +Y +M+ G PD++TY ++C G+L + LL+EM +P+
Sbjct: 160 LCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPN 219
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TYN L+ L K K + NLL M + G P V+ ++ LMDG G + K F
Sbjct: 220 IYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFL 279
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M G PDV Y ++I +++A +L M+ K +P+ TY+S+I G C G
Sbjct: 280 VMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLG 339
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + KEM RG N + YN+L+ L L +A + M E+G
Sbjct: 340 RITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERG 390
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 143/315 (45%), Gaps = 36/315 (11%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP T+ LIC G + + L N P +YN ++ L + K +
Sbjct: 182 FPDVI-TYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESK 240
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ M+ +G PD++ Y+I+M +G++ + ++ M ++G +PD ++YNI+++ L
Sbjct: 241 NLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGL 300
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG--------------------- 164
KG + A+NLL M P + +++L+DGL + G
Sbjct: 301 CKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANL 360
Query: 165 --------------NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
NLD F +M +G P+ YT +I G L+K Q LF
Sbjct: 361 VTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQH 420
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
++ KG +V+TY MI G C G FDEA M +ME GC PN + + ++ +L +
Sbjct: 421 LLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDE 480
Query: 271 LAEAHEVIRHMVEKG 285
+A +++ M+ KG
Sbjct: 481 NDKAEKLLHEMIAKG 495
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 138/276 (50%), Gaps = 3/276 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GEV + ++ + F+ + SY +L+ L I + + + + + D
Sbjct: 90 LCLKGEVKKSLHFHDKVVAQ---GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRST 146
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD++ Y+ ++ + +D+ + L EM G PD TY L+ + + A
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFG 206
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LLN M +P++ + TL+D L + G + K M KG PDVV Y++++ Y
Sbjct: 207 LLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYC 266
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
GE++KA+ +F M+ G P+V++YN +I G C + DEA +++EM + P+ +
Sbjct: 267 LVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTV 326
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y++L+ L G++ ++ + M +G+ +LV+
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVT 362
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 114/214 (53%), Gaps = 6/214 (2%)
Query: 75 GYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
GY P+ + N +M C K + K FH D++ GF D +Y ILL+ L K +
Sbjct: 75 GYQPNTIILNTLMKGLCLKGEVKKSLHFH---DKVVAQGFQMDQVSYGILLNGLCKIGET 131
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ LL +++ P V+ ++T++DGL + +D + EM +G PDV+ YT +
Sbjct: 132 RCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTL 191
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + AG+L +A L + MI K PN++TYN++I C GK E+ ++ M +G
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGV 251
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ ++Y+ L+ G++ +A ++ MV+ G
Sbjct: 252 KPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTG 285
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ IL +L+ ++ Y + + +QM +G PD++T +I++ LG++ +L ++
Sbjct: 12 EFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKI 71
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G+ P+ N L+ L + +L+ + + GF + + L++GL + G
Sbjct: 72 LKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGET 131
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ ++ PDVV Y+ +I +++A DL+ M +G P+V TY ++
Sbjct: 132 RCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTL 191
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GFC+AG+ EA ++ EM + NPN YNTL+ L GK+ E+ ++ M +KG
Sbjct: 192 ICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKG 250
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 124/269 (46%), Gaps = 8/269 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G ++IL+ C GEV A+++ +++ P SYN I++ L
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQT---GVNPDVYSYNIIINGLCK 302
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++M + PD +TY+ ++ +LG++ L EM G + T
Sbjct: 303 GKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVT 362
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL L K A+ L MKE G P+ +T L+DGL + G L + F +
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLL 422
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG DV YTVMI+ G ++A + M G +PN T+ +IR + D
Sbjct: 423 VKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDEND 482
Query: 238 EACTMMKEMESRGCNP--NFLVYNTLVSN 264
+A ++ EM ++G P NF + V+N
Sbjct: 483 KAEKLLHEMIAKGLLPFRNFHSERSSVTN 511
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ P I+ + ++ + ++ L +M G PD T +IL++ + +
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++L + ++G+ P+ + TLM GL G + +F D++ +G D V Y +++
Sbjct: 66 SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGL 125
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
GE A L + + P+V Y+++I G C DEA + EM +RG P+
Sbjct: 126 CKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDV 185
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ Y TL+ AG+L EA ++ M+ K
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILK 214
>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
Length = 794
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 139/291 (47%), Gaps = 10/291 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKS--KLFNFRPFKNSYNAILHAL 55
M E G T+N LI C V A +++ ++S K+ F + N +L+ L
Sbjct: 412 MTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTF-----TLNTLLYNL 466
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++Y+ E + + G+ PD ++Y VM A ++ K + L DEM + +P
Sbjct: 467 CKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSI 526
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+TYN L+ L K A++ LN + + G P + ++ + G+L+ F ++
Sbjct: 527 YTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNK 586
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PDVV ++ G+LEKA LF+ KG+ +V TYN++I+ C G
Sbjct: 587 MLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGD 646
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
D A +ME+RG P+ YN ++S L AG+ EA ++ + E GK
Sbjct: 647 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGK 697
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN+L+ T G + + F P +YN +L A + +M
Sbjct: 212 TFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARM 271
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
EG AP TYN ++ A RLG + Q +++ M GF PD TYN+L L + K
Sbjct: 272 KKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKV 331
Query: 132 LAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L + M+ + P V+ + TL+D + +EM +KG +V + +
Sbjct: 332 DEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNI 391
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ G+LE+A M +G P+V TYN++I +C A +A +M EM G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ NTL+ NL + EA E++R ++G
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRG 486
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 137/323 (42%), Gaps = 44/323 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T T+N L+ +G ++ F F P +YN +L A G+ Q
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYN-VLAA--GLCQ 327
Query: 61 YKLIEWVYQQMSDEG-----YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ ++ + DE +PD++TYN ++ A ++ + LL+EM G
Sbjct: 328 AGKVDEAFK-LKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSL 386
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T+NI++ L + + AL L M E G P V+ + TL+D +A N+ DE
Sbjct: 387 VTHNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDE 446
Query: 176 M-----------------------------------ANKGCMPDVVCYTVMITSYIAAGE 200
M +G +PD V Y ++ +Y +
Sbjct: 447 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENK 506
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
E A L+D M + P+++TYN++I+G C GK EA + E+ +G P+ YN
Sbjct: 507 PEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNI 566
Query: 261 LVSNLRNAGKLAEAHEVIRHMVE 283
++ G L +A + M+E
Sbjct: 567 IIHAYCKEGDLEKAFQFHNKMLE 589
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 78 PDILTYNIVMCAKYR------LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
P + N V+ A R LD F L+ P+ +T+N+L+H
Sbjct: 171 PSLQAANAVLSALARSPSTSPQASLDVFRSLI----ALRLHPNHYTFNLLVHTHCSKGTL 226
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL+ L+ M+ G P V+ + TL+ R G L + M +G P Y +
Sbjct: 227 ADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTL 286
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG- 250
+++Y G +++A ++ + M G P+++TYN + G C AGK DEA + EME
Sbjct: 287 VSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSI 346
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+P+ + YNTLV + ++A ++ M +KG LV+
Sbjct: 347 VSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVT 388
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +YN ++ L I KL E + ++ +G PD TYNI++ A + G L++
Sbjct: 524 PSIYTYNTLIKGLCTIG--KLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAF 581
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+ ++M + F PD T N L++ L K A+ L E G V+ + TL+ L
Sbjct: 582 QFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQAL 641
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G++D +FF +M +G PD Y V++++ AG E+AQ++ + G+L
Sbjct: 642 CKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSER 701
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP--NFLVYNTLVSNLRNAGKLAEAHEVI 278
F+Y +I+ K + + + ES G + YN V L G+L EA V+
Sbjct: 702 FSY-PLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVL 760
Query: 279 RHMVEKG------KYIHLVSKF-KRYKR 299
M++KG YI L+ KR KR
Sbjct: 761 DEMMQKGMSVDSSTYITLMEGLIKRQKR 788
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 42/286 (14%)
Query: 40 NFRPFKNSYNAILHALL----GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK 95
+ RP + NA+L AL Q L V++ + P+ T+N+++ G
Sbjct: 168 HVRPSLQAANAVLSALARSPSTSPQASLD--VFRSLIALRLHPNHYTFNLLVHTHCSKGT 225
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLH------VLGKGDKPLA---------------- 133
L L M G SPD TYN LL +LG+ LA
Sbjct: 226 LADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNT 285
Query: 134 -------------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
A N++ M GF+P + + L GL +AG +D DEM +
Sbjct: 286 LVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLS 345
Query: 181 CM-PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+ PDVV Y ++ + A +L + M KG ++ T+N +++G C G+ +EA
Sbjct: 346 IVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEA 405
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+K M G P+ + YNTL+ A +A+A ++ MV G
Sbjct: 406 LGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
Query: 101 RLLDEMGRSG-FSPDFHTYNILLHVLGKGDK--PLAALNLLNHMKEVGFDPSVLHFTTLM 157
+LL R G P N +L L + P A+L++ + + P+ F L+
Sbjct: 158 QLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLV 217
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
G L M G PDVV Y ++ ++ G L +A+ L M +G
Sbjct: 218 HTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIA 277
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P TYN+++ + G +A +++ M + G P+ YN L + L AGK+ EA ++
Sbjct: 278 PTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKL 337
Query: 278 IRHM 281
M
Sbjct: 338 KDEM 341
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D+F +I PN +T+N ++ C G +A + + M+ G +P+ + YNTL+
Sbjct: 196 DVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAH 255
Query: 266 RNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
G L EA ++ M ++G Y LVS + R
Sbjct: 256 CRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYAR 292
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 129/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P ++++N +M RLG LD+ RL M
Sbjct: 128 FNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 187
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG ++G +D
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVD 247
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A DL D M KG P+ TY ++I
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +V+R M+
Sbjct: 308 DGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLK 367
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 368 PDTGTYTMIINEF 380
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V K + RP S+N +++ +
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITK---WGLRPSVVSFNTLMNGYIR 172
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 232
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 233 FTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 292
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A + MI + + Y ++I G C G++
Sbjct: 293 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYL 352
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +++EM S G P+ Y +++ G + ++++ M G +V+
Sbjct: 353 DAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 407
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 252 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCC 311
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G PD
Sbjct: 312 KEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTG 371
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ L M G +P+V TYN ++ G
Sbjct: 372 TYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ LI C G++ A + +R I+ N R +Y A++ L
Sbjct: 291 MSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQE---NIRLDDVAYTALISGLCQ 347
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+Y E V ++M G PD TY +++ + G + +LL EM R G P T
Sbjct: 348 EGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 407
Query: 118 YNILLH 123
YN+L++
Sbjct: 408 YNVLMN 413
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T++ILI +R+ ++ +P +YNA++ +
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M G +++ +N ++ + GK+++ ++ EM G PD TY++
Sbjct: 327 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 386
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +G A LL+ MK+ P+VL ++ +++GL R GNL EM G
Sbjct: 387 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 446
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V YT ++T++ G +E+++ + + M +G LP+VF YNS+I GFC A + +EA
Sbjct: 447 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 506
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
T + EM R PN Y + AG++ A M+ G
Sbjct: 507 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 551
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 18/299 (6%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG P + F++L+ + ++G + V F+ K F FRP S N++L LL + +L
Sbjct: 149 NGSPNSV-IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 207
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-------------- 109
V+ M PD+ TY ++ A ++G + R+L EMG
Sbjct: 208 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSM 267
Query: 110 ---GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD +TY+IL++ + A +L M +VG P + + L+DG R G++
Sbjct: 268 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDI 327
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ DEM G +++ + ++ AG++EKA ++ M+ KG P+ TY+ +
Sbjct: 328 EQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLL 387
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G C A ++ EM+ R P L Y+ +++ L G L + ++R MV G
Sbjct: 388 IEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 446
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +N LI C + AR + ++ +L RP ++Y A +
Sbjct: 477 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL---RPNAHTYGAFIDGYSK 533
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + + +M G P++ Y ++ + G + + + + D T
Sbjct: 534 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L+H L + K A + + ++E G P+ + +L+ G + GN+D +EM
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD+V Y ++I AGE+E+A++LFD + +G PN TY +M+ G+C +
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++EM RG P+ +YN +++ K +A ++ + M+EKG
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 761
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G ++T+++LI C + A ++++ K KL P +Y+ I++ L
Sbjct: 372 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL---APTVLTYSVIINGLCR 428
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M G P+ + Y +M A + G++++ +L+ M G PD
Sbjct: 429 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 488
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + A L M E P+ + +DG S+AG ++ +F+EM
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKA-------------QD------------------ 206
+ G +P+V YT +I + G + +A QD
Sbjct: 549 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 608
Query: 207 ----LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+F + KG LPN FTYNS+I G C G D+A +++EM +G NP+ + YN L+
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 668
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L AG++ A + + +G
Sbjct: 669 DGLCKAGEIERAKNLFDDIEGRG 691
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G +N L +C G++ A ++++ ++ + P +Y+ ++
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV---EPDSQTYSLLIEGHCR 393
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M AP +LTY++++ R G L + +L EM +G P+
Sbjct: 394 GQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVV 453
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K + + +L M+E G P V + +L+ G +A ++ + + EM
Sbjct: 454 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 513
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P+ Y I Y AGE+E A F+ M++ G LPNV Y ++I G C G
Sbjct: 514 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 573
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ + + SR + Y+ L+ L GK+ EA + + EKG
Sbjct: 574 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 621
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 13/283 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NILI C GE+ A+ + + L P +Y A++ + +
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGL---TPNCVTYAAMVDGYCKSKNPTAAFQLL 719
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD YN+++ + K ++ L EM GF+ ++N L+ K
Sbjct: 720 EEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKS 778
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A +LL M E F P+ + +T+L+D +AG + K + EM + MP Y
Sbjct: 779 GKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTY 838
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T ++ Y G + + LF+ M+ KG P+ TY MI +C G EAC + E+
Sbjct: 839 TSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILV 898
Query: 249 RGC------NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + + + AG + EA EV+R MV+ G
Sbjct: 899 KGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 941
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 13/244 (5%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN IL+ +++ ++Q+M ++G+A + ++N ++ + GKL + + LL+EM
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMI 792
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
F P+ TY L+ K A L M+E P+ +T+L+ G GN+
Sbjct: 793 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 852
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ---------LP 218
F+EM KG PD + Y VMI +Y G + +A L D ++ KG LP
Sbjct: 853 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLP 912
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
T + + RGF +AG DEA +++ M G N LV +N ++ ++
Sbjct: 913 ---TCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLL 969
Query: 279 RHMV 282
+ M
Sbjct: 970 KQMA 973
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 17/197 (8%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
SP+ +++L+ K + A+N+ K F PS+L +L+ L + ++
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGE-----------------LEKAQDLFDGMITK 214
FD M +PDV YT MI+++ G L++A +L M+ K
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +P+++TY+ +I GFCM + EA M+ EM G P + YN L+ G + +A
Sbjct: 271 GLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQA 330
Query: 275 HEVIRHMVEKGKYIHLV 291
+ MV G +L+
Sbjct: 331 FRIKDEMVACGIEANLI 347
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE F T+ LI C G +G A+++ +++ + N P +Y ++LH
Sbjct: 791 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL---WLEMQERNVMPTAKTYTSLLHGYHN 847
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM------GRSGF 111
I + ++++M +G PD +TY +++ A R G + + +L DE+ +SGF
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGF 907
Query: 112 SPDFHTYNIL---LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
T +++ + G D+ A +L M + G+ + L+DG N +
Sbjct: 908 RLGLPTCSVIARGFQIAGNMDE---AAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSED 964
Query: 169 CKYFFDEMA 177
+MA
Sbjct: 965 SDNLLKQMA 973
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 145/323 (44%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T T+N + +C G V ARK+++ + N P SYN +++
Sbjct: 286 MLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNK---NLMPDLVSYNTLIYGYTR 342
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ ++ G P ++TYN ++ R+G LD RL DEM + G PD T
Sbjct: 343 LGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFT 402
Query: 118 YNILLHVLGK-GDKPLA----------------------------------ALNLLNHMK 142
+ IL+ K G+ P+A A + M
Sbjct: 403 FTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 462
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
GF P ++ + +DGL + GNL +M G +PD V YT +I +++ AG L
Sbjct: 463 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLR 522
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA+ +F M++KG P+V TY +I + + G+ A EM +G +PN + YN L+
Sbjct: 523 KARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 582
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L K+ +A++ M KG
Sbjct: 583 NGLCKVRKMDQAYKFFTEMQAKG 605
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G +A T++ LI C G++ A ++ E + P +YN I++ L
Sbjct: 251 MLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAV---PTLVTYNTIMYGLCK 307
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M ++ PD+++YN ++ RLG + + L E+ G P T
Sbjct: 308 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVT 367
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + A+ L + M + G DP V FT L+ G + GNL K FDEM
Sbjct: 368 YNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEML 427
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N+G PD Y I + G+ KA + + M+ +G P++ TYN I G G
Sbjct: 428 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 487
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++K+M G P+ + Y +++ AG L +A V M+ KG + +V+
Sbjct: 488 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVT 542
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + T+N LI C G++ +A ++ + IK P ++ ++ +
Sbjct: 360 GLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKH---GPDPDVFTFTILVRGFCKLGNL 416
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + ++ +M + G PD Y + + +LG + + +EM GF PD TYN+
Sbjct: 417 PMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVF 476
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A L+ M G P + +T+++ AG+L + F EM +KG
Sbjct: 477 IDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGI 536
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV YTV+I SY G L+ A F M KG PNV TYN++I G C K D+A
Sbjct: 537 FPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYK 596
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EM+++G +PN Y L++ N G EA + + M+++
Sbjct: 597 FFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 639
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 144/320 (45%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T T+N ++ + + G ++ ++ ++ + P +YN +++ L +
Sbjct: 181 MVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGE 240
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + Q+M G TY+ ++ G+LD+ RL +EM G P TYN
Sbjct: 241 LEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNT 300
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + A LL+ M P ++ + TL+ G +R GN+ F E+ +G
Sbjct: 301 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRG 360
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK----- 235
+P VV Y +I G+L+ A L D MI G P+VFT+ ++RGFC G
Sbjct: 361 LVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAK 420
Query: 236 --FDE----------------------------ACTMMKEMESRGCNPNFLVYNTLVSNL 265
FDE A M +EM +RG P+ + YN + L
Sbjct: 421 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 480
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G L EA E+++ M+ G
Sbjct: 481 HKLGNLKEASELVKKMLYNG 500
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M G PD N +L +L D + A + N M E G P+V+ + T++D +
Sbjct: 144 KMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQ 203
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + +M GC+P+ V Y V++ +GELE+A++L M+ G + +TY
Sbjct: 204 GKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTY 263
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ +IRG+C G+ DEA + +EM SRG P + YNT++ L G++++A +++ MV
Sbjct: 264 DPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVN 323
Query: 284 KGKYIHLVS 292
K LVS
Sbjct: 324 KNLMPDLVS 332
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 111/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
VY M + G P ++TYN ++ + + GK+ + +LL +M + G P+ TYN+L++ L
Sbjct: 177 VYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLS 236
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A L+ M +G + S + L+ G G LD +EM ++G +P +V
Sbjct: 237 HSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLV 296
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ G + A+ L D M+ K +P++ +YN++I G+ G EA + E+
Sbjct: 297 TYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL 356
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG P+ + YNTL+ L G L A + M++ G
Sbjct: 357 RFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 10/284 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G TF IL+ C G + +A+++ + + L +P + +Y + L
Sbjct: 391 MIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGL---QPDRFAYITRIVGELK 447
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M G+ PD++TYN+ + ++LG L + L+ +M +G PD T
Sbjct: 448 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 507
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++H A + M G PSV+ +T L+ + G L F EM
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ Y +I ++++A F M KG PN +TY +I C G +
Sbjct: 568 EKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQ 627
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EA + K+M R P+ ++ L+ +L K V+RH+
Sbjct: 628 EALRLYKDMLDREIQPDSCTHSALLKHLNKDYK----SHVVRHL 667
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 128/276 (46%), Gaps = 4/276 (1%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARK---VVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+ GF + T+ +++ GL R V+E+ + K+ N + +L
Sbjct: 74 QTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWIYAKKS 133
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVM-CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ V+ +M +G PD+ N V+ + R +D + + M G P TY
Sbjct: 134 MLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTY 193
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N +L K K AL LL M+++G P+ + + L++GLS +G L+ K EM
Sbjct: 194 NTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLR 253
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G Y +I Y G+L++A L + M+++G +P + TYN+++ G C G+ +
Sbjct: 254 LGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSD 313
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A ++ M ++ P+ + YNTL+ G + EA
Sbjct: 314 ARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEA 349
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + T+ +LI + G + + F + P +YNA+++ L +R+
Sbjct: 531 MLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRK 590
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M +G +P+ TY I++ LG + RL +M PD T++
Sbjct: 591 MDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSA 650
Query: 121 LLHVLGKGDKPLAALNLLN 139
LL L K K +L N
Sbjct: 651 LLKHLNKDYKSHVVRHLEN 669
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 142/285 (49%), Gaps = 6/285 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G +T+N +I C G++ A + E+ +K P +YN +++ L
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPL---PTVVTYNTLINGYLTKGN 458
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M + G PD TYN ++ + GKL+ EM G +P+ +Y
Sbjct: 459 VNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTA 518
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K K AL+LL M+E+G +P+V + +++GLS+ + D+M +G
Sbjct: 519 LIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQG 578
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ YT +I G + A +F M + LPN++TY+S+I G C GK DEA
Sbjct: 579 LLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAE 638
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEME +G P+ + + +L+ G++ A ++R MV+ G
Sbjct: 639 ILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMG 683
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 133/289 (46%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
M++ G T+N LI C G A K+ L N + +YN I+ L
Sbjct: 364 MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ----TYNEIIKGLC 419
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++++M G P ++TYN ++ G ++ RLLD M +G PD
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEW 479
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ K K +A M E G +P+ + +T L+DG S+ G +D M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P+V Y +I +A+ + D M+ +G LPNV TY ++I G C G+
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +ME R C PN Y++L+ L GK EA +++ M KG
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKG 648
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 145/307 (47%), Gaps = 10/307 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNF--RPFKNSYNAILHALLGI 58
M+ +G + TFN LI + G R+ I S++F + P +Y +++
Sbjct: 189 MLNSGIQPSLLTFNTLINILSKKGKVREA--ELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R L V+ +M EG P+ +TY+ ++ G++D+ +L+EM G P +TY
Sbjct: 247 RNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTY 306
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ + L + A+ L+ MK+ G P+V +T L+ GLSR G L+ + +M
Sbjct: 307 TLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLK 366
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G +P+ V Y +I G A +F M G L N TYN +I+G C+ G ++
Sbjct: 367 EGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEK 426
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + ++M G P + YNTL++ G + A ++ M E G Y LVS
Sbjct: 427 AMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVS 486
Query: 293 KFKRYKR 299
F ++ +
Sbjct: 487 GFSKWGK 493
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 139/276 (50%), Gaps = 6/276 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T T+N LI T G V A ++++ ++ P + +YN ++
Sbjct: 434 MLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKEN---GCEPDEWTYNELVSGFSK 490
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Q+M + G P+ ++Y ++ + GK+D LL M G +P+ +
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +++ L K ++ A + + M E G P+V+ +TTL+DGL R G F +M
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C+P++ Y+ +I G+ ++A+ L M KG P+ T+ S+I GF + G+ D
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID 670
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
A +++ M GC PN+ Y+ L+ L+ L E
Sbjct: 671 HAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 141/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G + T++ LI C G V A ++E I+ + P +Y + AL
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGI---EPTVYTYTLPITALCA 315
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + +M G P++ TY ++ RLGKL+ L +M + G P+ T
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ L G + AL + + M+ G + + ++ GL G+++ F++M
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF- 236
G +P VV Y +I Y+ G + A L D M G P+ +TYN ++ GF GK
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495
Query: 237 ----------------------------------DEACTMMKEMESRGCNPNFLVYNTLV 262
D A +++K ME GCNPN YN ++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L + +EA ++ MVE+G
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQG 578
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++S G+ + + N ++ + ++ L +M SG P T+N L+++L K
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A +L+ + + P V +T+L+ G R NLD FD M +GC P+ V Y+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G +++A D+ + MI KG P V+TY I C +EA ++ M+ R
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN Y L+S L GKL A + M+++G
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEG 368
>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Glycine max]
Length = 827
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T TFN +I C G V AR + FIK +F P +YN I+ +
Sbjct: 527 MVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ---SFIPTSMTYNCIIDGYVK 583
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
E VY++M +P+++TY ++ + K+D ++ D+M R G D
Sbjct: 584 EGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITV 643
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A + + EVG P+ + + ++ N++A EM
Sbjct: 644 YATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMI 703
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N D+ YT +I + G+L A DL+ M+ +G +P++F YN +I G C G+ +
Sbjct: 704 NNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLE 763
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++KEM+ P L+YNTL++ G L EA + M++KG
Sbjct: 764 NAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKG 811
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 141/287 (49%), Gaps = 13/287 (4%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+ENG + T+NI++ C G+V A + ++ I + P SYN H +LG
Sbjct: 424 VENGIASVV-TYNIVLLWLCELGKVNEACNLWDKMIGKGI---TPSLVSYN---HMILGH 476
Query: 59 RQYKLIEWVYQQMS---DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ ++ ++ M+ + G P+ +TY I+M ++ G + + D+M +G P
Sbjct: 477 CKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTD 536
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+T+N +++ L K + A + LN + F P+ + + ++DG + G +D+ + + E
Sbjct: 537 YTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYRE 596
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M P+V+ YT +I + + +++ A + D M KG ++ Y ++I GFC
Sbjct: 597 MCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQD 656
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ AC ++ G PN +VYN ++S RN + A + + M+
Sbjct: 657 MENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMI 703
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 125/284 (44%), Gaps = 7/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A +++I+I C ++ LA K+VE + + P + +Y A++ A + + +
Sbjct: 252 GLKLDAASYSIVIQAVCRGSDLDLASKLVE---GDEELGWVPSEGTYAAVIGACVRLGNF 308
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +M D ++ ++ G ++ RL DE+ G +P+ +++L
Sbjct: 309 GEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVL 368
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K A L MK +G P+V L+ G R NL Y + A +
Sbjct: 369 IEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGF-RKQNLLENAYLLLDGAVENG 427
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+ VV Y +++ G++ +A +L+D MI KG P++ +YN MI G C G D+A
Sbjct: 428 IASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHE 487
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M + G PN + Y L+ G A + MV G
Sbjct: 488 VMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAG 531
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 6/281 (2%)
Query: 8 TTARTFNILICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
+ +R FN L+ + + VE F ++ + + PF N +L A++ +
Sbjct: 150 SDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPF---VNVLLTAMIRRNMVEDA 206
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ +M++ D T ++M A + GK + R + G D +Y+I++
Sbjct: 207 HRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQA 266
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ +G A L+ +E+G+ PS + ++ R GN DEM + +
Sbjct: 267 VCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVN 326
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V T +I Y G++ A LFD ++ G PNV ++ +I G ++A +
Sbjct: 327 VAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYT 386
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ G P + N L+ R L A+ ++ VE G
Sbjct: 387 RMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENG 427
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 1/246 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ ++ A L ++ E + Q + G D +Y+IV+ A R LD +L++
Sbjct: 224 TLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGD 283
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ P TY ++ + AL L + M + +V T+L+ G G++
Sbjct: 284 EELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDV 343
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
++ FDE+ G P+V ++V+I G +EKA +L+ M G P VF N +
Sbjct: 344 NSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFL 403
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
++GF + A ++ G + + YN ++ L GK+ EA + M+ KG
Sbjct: 404 LKGFRKQNLLENAYLLLDGAVENGI-ASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGI 462
Query: 287 YIHLVS 292
LVS
Sbjct: 463 TPSLVS 468
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 1/177 (0%)
Query: 108 RSGFS-PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R GF D +N LL + +K A+ M E G P V L+ + R +
Sbjct: 144 RYGFKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMV 203
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FDEMA + D V++ + + G+ +A+ F +G + +Y+ +
Sbjct: 204 EDAHRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIV 263
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
I+ C D A +++ E G P+ Y ++ G EA + MV+
Sbjct: 264 IQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVD 320
>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 938
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 23/310 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G ++N LI C G A+ +V+ + N I H +L
Sbjct: 187 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI------------SELNLITHTILL 234
Query: 58 IRQYKL--IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Y L IE Y+ M G+ PD++T++ ++ + GK+ + LL EM P+
Sbjct: 235 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 294
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L K + AL L + M G ++ +T LMDGL +AG+L + F
Sbjct: 295 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 354
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +P+VV YT ++ AG+L A+ + M+ K +PNV TY+SMI G+ G
Sbjct: 355 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 414
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM----VEKGKYI--H 289
+EA +++++ME + PN Y T++ L AGK A E+ + M VE+ YI
Sbjct: 415 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 474
Query: 290 LVSKFKRYKR 299
LV+ KR R
Sbjct: 475 LVNHLKRIGR 484
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 12/296 (4%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G + + NI++ E G + + + L P +Y L ++ I
Sbjct: 603 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 662
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ + G YN ++ +LG + ++ +M GF PD T+N L+H
Sbjct: 663 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
G AL+ + M E G P+V + T++ GLS AG + + EM ++G PD
Sbjct: 723 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 782
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y +I+ G ++ + ++ MI G +P TYN +I F GK +A ++K
Sbjct: 783 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 842
Query: 245 EMESRGCNPNFLVYNTLVSNL------------RNAGKLAEAHEVIRHMVEKGKYI 288
EM RG +PN Y T++S L + A LAEA +++ MVE+ YI
Sbjct: 843 EMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYI 898
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 40/286 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++ +L + +W Y+ M ++G PDI T+NI+M ++ + G + +L D+M
Sbjct: 541 SYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P + NI++ +L + K A+++LN M + P++ + +D S+
Sbjct: 600 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA 659
Query: 167 DA---------------------------CKY--------FFDEMANKGCMPDVVCYTVM 191
DA CK +M +G +PD V + +
Sbjct: 660 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSL 719
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ Y + KA + M+ G PNV TYN++IRG AG E + EM+SRG
Sbjct: 720 MHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
P+ YN L+S G + + + M+ G LV K Y
Sbjct: 780 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG----LVPKTSTY 821
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 11/254 (4%)
Query: 39 FNFRPFKNSYNAILHAL-LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
F P +N+++H + + + +Y +M G +PD+ N+++ + ++G+L
Sbjct: 87 FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 146
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
LL S D TYN ++ L + A L+ M ++G P + + TL+
Sbjct: 147 FAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
DG + GN K DE++ +++ +T++++SY +E+A + M+ G
Sbjct: 204 DGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYYNLHAIEEA---YRDMVMSGFD 256
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+V T++S+I C GK E +++EME PN + Y TLV +L A A +
Sbjct: 257 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 316
Query: 278 IRHMVEKGKYIHLV 291
MV +G + LV
Sbjct: 317 YSQMVVRGIPVDLV 330
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 1/269 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P + +L+ + G R+ + F N P +Y A++ L
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 379
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E++ QM ++ P+++TY+ ++ + G L++ LL +M P+ TY
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A+ L M+ +G + + L++ L R G + K +M +KG
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D + YT +I + G+ E A + M +G +V +YN +I G GK A
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-AD 558
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
K M +G P+ +N ++++ R G
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQG 587
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++ L + E ++ + ++ P+++TY ++ + G L ++ +M
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
P+ TY+ +++ K A++LL M++ P+ + T++DGL +AG +
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
EM G + ++ G +++ + L M++KG + Y S+I
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 511
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
F G + A +EM+ RG + + YN L+S + GK+ A + M EKG
Sbjct: 512 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKG 568
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+N +I + GL ++V + + K RP +YNA++ I
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +Y +M +G P TYN+++ +GK+ Q LL EMG+ G SP+ TY
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 121 LLHVLGK 127
++ L K
Sbjct: 859 MISGLCK 865
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 13/191 (6%)
Query: 111 FSPDF-----HTYNILLHVLGK----GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
F PD Y L H L + ++ A L+ M G P + +L+ +
Sbjct: 45 FDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFN 104
Query: 162 RAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G + D + +M G PDV V+I S+ G L A L + +
Sbjct: 105 VNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDT 161
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN++I G C G DEA + EM G P+ + YNTL+ G A ++
Sbjct: 162 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 221
Query: 281 MVEKGKYIHLV 291
+ E H +
Sbjct: 222 ISELNLITHTI 232
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T++ILI +R+ ++ +P +YNA++ +
Sbjct: 276 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 335
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M G +++ +N ++ + GK+++ ++ EM G PD TY++
Sbjct: 336 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 395
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +G A LL+ MK+ P+VL ++ +++GL R GNL EM G
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V YT ++T++ G +E+++ + + M +G LP+VF YNS+I GFC A + +EA
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
T + EM R PN Y + AG++ A M+ G
Sbjct: 516 TYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCG 560
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 1/281 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG P + F++L+ + ++G + V F+ K F FRP S N++L LL + +L
Sbjct: 140 NGSPNSV-IFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVEL 198
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V+ M PD+ TY ++ A ++G + R+L EMG G SP+ TYN+++
Sbjct: 199 FWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIG 258
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + A+ L M + G P + + L++G K EM + G P
Sbjct: 259 GLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ + Y +I ++ G++E+A + D M+ G N+ +N+++ G C AGK ++A +M
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+EM +G P+ Y+ L+ +A A E++ M ++
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +N LI C + AR + ++ +L RP ++Y A +
Sbjct: 486 MREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRL---RPNAHTYGAFIDGYSK 542
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + + +M G P++ Y ++ + G + + + + D T
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L+H L + K A + + ++E G P+ + +L+ G + GN+D +EM
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD+V Y ++I AGE+E+A++LFD + +G PN TY +M+ G+C +
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++EM RG P+ +YN +++ K +A ++ + M+EKG
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG 770
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G ++T+++LI C + A ++++ K KL P +Y+ I++ L
Sbjct: 381 MMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL---APTVLTYSVIINGLCR 437
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M G P+ + Y +M A + G++++ +L+ M G PD
Sbjct: 438 CGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFC 497
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + A L M E P+ + +DG S+AG ++ +F+EM
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKA-------------QD------------------ 206
+ G +P+V YT +I + G + +A QD
Sbjct: 558 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 617
Query: 207 ----LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+F + KG LPN FTYNS+I G C G D+A +++EM +G NP+ + YN L+
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
L AG++ A + + +G
Sbjct: 678 DGLCKAGEIERAKNLFDDIEGRG 700
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G +N L +C G++ A ++++ ++ + P +Y+ ++
Sbjct: 346 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGV---EPDSQTYSLLIEGHCR 402
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M AP +LTY++++ R G L + +L EM +G P+
Sbjct: 403 GQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVV 462
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K + + +L M+E G P V + +L+ G +A ++ + + EM
Sbjct: 463 YTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEML 522
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ P+ Y I Y AGE+E A F+ M++ G LPNV Y ++I G C G
Sbjct: 523 ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVT 582
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ + + SR + Y+ L+ L GK+ EA + + EKG
Sbjct: 583 EAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 7/286 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E G A T+N LI C G V A +++E + P +YN ++ L
Sbjct: 628 EKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC---IKGINPDIVTYNILIDGLCKAG 684
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + ++ + G P+ +TY ++ + +LL+EM G PD YN
Sbjct: 685 EIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYN 744
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++L+ K +K AL+L M E GF S + F TL++G ++G L + +EM K
Sbjct: 745 VILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEK 803
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+P+ V YT +I AG + +A+ L+ M + +P TY S++ G+ G E
Sbjct: 804 QFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEV 863
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM ++G P+ + Y ++ G + EA ++ ++ KG
Sbjct: 864 SALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKG 909
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 117/238 (49%), Gaps = 1/238 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN IL+ +++ ++Q+M ++G+A + ++N ++ + GKL + + LL+EM
Sbjct: 743 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMI 801
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
F P+ TY L+ K A L M+E P+ +T+L+ G GN+
Sbjct: 802 EKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMS 861
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
F+EM KG PD + Y VMI +Y G + +A L D ++ KG +V Y+++I
Sbjct: 862 EVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALI 921
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C +F E ++ E+ G + + + AG + EA EV+R MV+ G
Sbjct: 922 QALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P+ + ++++M + ++G L + + F P + N LL L KG+K
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ + M P V +T ++ + GN+ K EM KGC P++V Y V+I
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A L++A +L M+ KG +P+++TY+ +I GFCM + EA M+ EM G P +
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPI 321
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
YN L+ G + +A + MV G +L+
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLI 356
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 6/214 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE F T+ LI C G +G A+++ +++ + N P +Y ++LH
Sbjct: 800 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL---WLEMQERNVMPTAKTYTSLLHGYHN 856
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++M +G PD +TY +++ A R G + + +L DE+ G
Sbjct: 857 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAA 916
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L K ++ L LLN + E GF + + + G AGN+D M
Sbjct: 917 YDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 976
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
G + + ++ E + +L M
Sbjct: 977 KFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 112/286 (39%), Gaps = 44/286 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E GF +T +FN LI C G++ A ++E I+ + F P +Y +++
Sbjct: 766 MLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQ---FIPNHVTYTSLIDHNCK 821
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M + P TY ++ + +G + + L +EM G PD T
Sbjct: 822 AGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT 881
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEM 176
Y +++ D R GN ++ACK DE+
Sbjct: 882 YYVMI-----------------------------------DAYCREGNVMEACK-LKDEI 905
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
KG V Y +I + E + L + + G + T + + RGF +AG
Sbjct: 906 LVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNM 965
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
DEA +++ M G N LV +N ++ +++ M
Sbjct: 966 DEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G A T+N LI C G++ A + +K + P ++YN ++HAL
Sbjct: 323 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM---PSVSTYNLLVHALFM 379
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M +G PD +TYNI++ R G + L +EM G P T
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++VL + ++ A +L + + G P V+ F ++DG GN++ EM
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 499
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD V + ++ G++E+A+ L D M +G P+ +YN++I G+ G
Sbjct: 500 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 559
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEKG 285
+A + EM S G NP L YN L+ L G LAE E+++ MV KG
Sbjct: 560 DAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE--ELLKEMVNKG 607
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 116/218 (53%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M ++G P I T N ++ +L +++ L EM R S +T+NI+++VL K
Sbjct: 180 FYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCK 239
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A + M+ +GF P+V+ + T++ G S GN++ + D M KG PD
Sbjct: 240 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 299
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I+ G LE+A LFD M+ G +PN TYN++I G+C G + A + EM
Sbjct: 300 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 359
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ YN LV L G++ EA ++I+ M +KG
Sbjct: 360 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 138/294 (46%), Gaps = 6/294 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F++L+ C E+ A + + F K P + N +L L + + ++ +Y +M
Sbjct: 159 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 218
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ + T+NI++ + GKL + + M GF P+ +YN ++H
Sbjct: 219 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 278
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L+ M+ G +P + +L+ G+ + G L+ FD+M G +P+ V Y +
Sbjct: 279 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 338
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I Y G+LE+A D M+ KG +P+V TYN ++ M G+ EA M+KEM +G
Sbjct: 339 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 398
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
P+ + YN L++ G +A ++ M+ KG Y L+ R R
Sbjct: 399 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + T+ LI C G + A + ++ ++ L P +YN ++
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV---PNAVTYNTLIDGYCNKGDL 348
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +M +G P + TYN+++ A + G++ + ++ EM + G PD TYNIL
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + A +L N M G +P+ + +T+L+ LSR + F+++ ++G
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDV+ + M+ + A G +E+A L M K P+ T+N++++G C GK +EA
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM+ RG P+ + YNTL+S G + +A V M+ G
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 47/333 (14%)
Query: 8 TTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA---------- 54
+T TFNI++ C G++ AR+ + F++ F+P SYN I+H
Sbjct: 225 STVYTFNIMVNVLCKEGKLKKAREFIG-FMEG--LGFKPNVVSYNTIIHGYSSRGNIEGA 281
Query: 55 --LLGIRQYKLIE-----------------------WVYQQMSDEGYAPDILTYNIVMCA 89
+L + K IE ++ +M + G P+ +TYN ++
Sbjct: 282 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 341
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
G L++ DEM + G P TYN+L+H L + A +++ M++ G P
Sbjct: 342 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 401
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + L++G SR GN +EM +KG P V YT +I +++A DLF+
Sbjct: 402 AITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 461
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
++ +G P+V +N+M+ G C G + A ++KEM+ + P+ + +NTL+ G
Sbjct: 462 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 521
Query: 270 KLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
K+ EA ++ M +G Y L+S + R
Sbjct: 522 KVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 554
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G A T+NILI G A+K + + P +Y ++++ L +
Sbjct: 393 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 452
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + +++++ D+G +PD++ +N ++ G +++ LL EM R PD T+N
Sbjct: 453 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 512
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + K A LL+ MK G P + + TL+ G R G++ DEM + G
Sbjct: 513 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 572
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
P ++ Y +I E + A++L M+ KG P+ TY S+I G
Sbjct: 573 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14770, mitochondrial; Flags: Precursor
Length = 940
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 150/310 (48%), Gaps = 23/310 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G ++N LI C G A+ +V+ + N I H +L
Sbjct: 189 MVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI------------SELNLITHTILL 236
Query: 58 IRQYKL--IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Y L IE Y+ M G+ PD++T++ ++ + GK+ + LL EM P+
Sbjct: 237 SSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH 296
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L K + AL L + M G ++ +T LMDGL +AG+L + F
Sbjct: 297 VTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKM 356
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +P+VV YT ++ AG+L A+ + M+ K +PNV TY+SMI G+ G
Sbjct: 357 LLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGM 416
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM----VEKGKYI--H 289
+EA +++++ME + PN Y T++ L AGK A E+ + M VE+ YI
Sbjct: 417 LEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDA 476
Query: 290 LVSKFKRYKR 299
LV+ KR R
Sbjct: 477 LVNHLKRIGR 486
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 12/296 (4%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G + + NI++ E G + + + L P +Y L ++ I
Sbjct: 605 GIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAI 664
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ + G YN ++ +LG + ++ +M GF PD T+N L+H
Sbjct: 665 FKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 724
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
G AL+ + M E G P+V + T++ GLS AG + + EM ++G PD
Sbjct: 725 YFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPD 784
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y +I+ G ++ + ++ MI G +P TYN +I F GK +A ++K
Sbjct: 785 DFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLK 844
Query: 245 EMESRGCNPNFLVYNTLVSNL------------RNAGKLAEAHEVIRHMVEKGKYI 288
EM RG +PN Y T++S L + A LAEA +++ MVE+ YI
Sbjct: 845 EMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYI 900
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 124/286 (43%), Gaps = 40/286 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++ +L + +W Y+ M ++G PDI T+NI+M ++ + G + +L D+M
Sbjct: 543 SYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 601
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P + NI++ +L + K A+++LN M + P++ + +D S+
Sbjct: 602 KSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRA 661
Query: 167 DA---------------------------CKY--------FFDEMANKGCMPDVVCYTVM 191
DA CK +M +G +PD V + +
Sbjct: 662 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSL 721
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ Y + KA + M+ G PNV TYN++IRG AG E + EM+SRG
Sbjct: 722 MHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 781
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
P+ YN L+S G + + + M+ G LV K Y
Sbjct: 782 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADG----LVPKTSTY 823
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 121/254 (47%), Gaps = 11/254 (4%)
Query: 39 FNFRPFKNSYNAILHAL-LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
F P +N+++H + + + +Y +M G +PD+ N+++ + ++G+L
Sbjct: 89 FGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLS 148
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
LL S D TYN ++ L + A L+ M ++G P + + TL+
Sbjct: 149 FAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 205
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
DG + GN K DE++ +++ +T++++SY +E+A + M+ G
Sbjct: 206 DGFCKVGNFVRAKALVDEISE----LNLITHTILLSSYYNLHAIEEA---YRDMVMSGFD 258
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+V T++S+I C GK E +++EME PN + Y TLV +L A A +
Sbjct: 259 PDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALAL 318
Query: 278 IRHMVEKGKYIHLV 291
MV +G + LV
Sbjct: 319 YSQMVVRGIPVDLV 332
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 118/269 (43%), Gaps = 1/269 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G P + +L+ + G R+ + F N P +Y A++ L
Sbjct: 322 MVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGD 381
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E++ QM ++ P+++TY+ ++ + G L++ LL +M P+ TY
Sbjct: 382 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 441
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A+ L M+ +G + + L++ L R G + K +M +KG
Sbjct: 442 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 501
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D + YT +I + G+ E A + M +G +V +YN +I G GK A
Sbjct: 502 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-AD 560
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
K M +G P+ +N ++++ R G
Sbjct: 561 WAYKGMREKGIEPDIATFNIMMNSQRKQG 589
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 1/238 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++ L + E ++ + ++ P+++TY ++ + G L ++ +M
Sbjct: 334 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 393
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
P+ TY+ +++ K A++LL M++ P+ + T++DGL +AG +
Sbjct: 394 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 453
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
EM G + ++ G +++ + L M++KG + Y S+I
Sbjct: 454 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLI 513
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
F G + A +EM+ RG + + YN L+S + GK+ A + M EKG
Sbjct: 514 DVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKG 570
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 62/127 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+N +I + GL ++V + + K RP +YNA++ I
Sbjct: 741 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 800
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K +Y +M +G P TYN+++ +GK+ Q LL EMG+ G SP+ TY
Sbjct: 801 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 860
Query: 121 LLHVLGK 127
++ L K
Sbjct: 861 MISGLCK 867
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 74/191 (38%), Gaps = 13/191 (6%)
Query: 111 FSPDF-----HTYNILLHVLGK----GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
F PD Y L H L + ++ A L+ M G P + +L+ +
Sbjct: 47 FDPDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFN 106
Query: 162 RAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G + D + +M G PDV V+I S+ G L A L + +
Sbjct: 107 VNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDT 163
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN++I G C G DEA + EM G P+ + YNTL+ G A ++
Sbjct: 164 VTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE 223
Query: 281 MVEKGKYIHLV 291
+ E H +
Sbjct: 224 ISELNLITHTI 234
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 121/225 (53%), Gaps = 1/225 (0%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q +E P+ TY ++ + GKLDQ + LLDEM G P +N ++ L K
Sbjct: 19 QLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKA 78
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM-ANKGCMPDVVC 187
+ AL + P ++ F L+D L ++G ++ F+ M + C+P+VV
Sbjct: 79 GRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVT 138
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT +I G+L++A +L D M G PNV TY+ ++ G C AG+ D+ T+++EM
Sbjct: 139 YTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMT 198
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG P+ ++YNTL++ L + +L EA E+++ M+ G Y +V+
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVT 243
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 13/295 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P N +I C G G A + +K P ++N ++ AL+
Sbjct: 56 MRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKC---TPDIITFNILVDALVK 112
Query: 58 IRQYKLIEWVYQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +++ M P+++TY V+ + GKLD+ LLD M +G P+
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY++L+ L K + LL M GF P V+ + TL++GL ++ LD M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC P VV Y ++ + + ++++A L M +G P+V YN++I G C +
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNL------RNAGKLAEAHEVIRHMVEKG 285
D+A ++K+M + C P+ + Y+T++ L KL A E++ M + G
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTG 347
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 146/328 (44%), Gaps = 46/328 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI +G T T+N L+ C +V A ++++ + P +YN ++ L
Sbjct: 232 MIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER---GCPPDVINYNTVIAGLCR 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLG---KLDQFHRLLDEMGRSGF 111
+ + + +QM PD++TY+ + +C +R+ KL+ +L+ M ++G
Sbjct: 289 DARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGC 348
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
P+ TY +++ L + K AL LL M + P + F+ ++ L ++ +LDA
Sbjct: 349 PPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYK 408
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD---------------------- 209
F M+ + C P+ V Y +I GE++KA +F+
Sbjct: 409 IFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCG 468
Query: 210 ------------GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
GMI K P+ +Y ++IRG C +EA + + +E++G V
Sbjct: 469 VGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGV 528
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN LV+ L +L++AH V ++E G
Sbjct: 529 YNVLVNELCKKKRLSDAHGVANKLIEAG 556
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 4/126 (3%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GEV A +V E ++S FRP +YN++L L G+ + + + + M + PD
Sbjct: 436 GEVDKAVRVFELMVES----FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDG 491
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+Y ++ R+ +++ + L + GF+ + YN+L++ L K + A + N
Sbjct: 492 ASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANK 551
Query: 141 MKEVGF 146
+ E G+
Sbjct: 552 LIEAGY 557
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 16/290 (5%)
Query: 11 RTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
R+FNILI C GEV A +++ R++ + +F + L L R
Sbjct: 263 RSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSF--------SCLIGLFSRRGEMD 314
Query: 64 IEWVY-QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
Y ++M G PD + Y +V+ R G + + R+ DEM G PD TYN LL
Sbjct: 315 HAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLL 374
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ L K + L A LLN M+E G P + FTTL+ G R GN + FD + +
Sbjct: 375 NGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLR 434
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y +I G+L KA +L+D M + LPN TY+ +I C G+ ++A
Sbjct: 435 PDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGF 494
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM +G PN YN+++ +G + + + ++ M + + L++
Sbjct: 495 LDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLIT 544
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 132/287 (45%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
++++ P A N L+ G E R + S + + N ++H+
Sbjct: 113 LLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAY--TLNIMVHSYCKT 170
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++ + V +M PD++T+N+++ A++R G +D L+D M G P TY
Sbjct: 171 LEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTY 230
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N +L L K + A + M + P V F L+ G R G + F+ EM +
Sbjct: 231 NSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQH 290
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ PDVV ++ +I + GE++ A M G +P+ Y +I GFC AG E
Sbjct: 291 RYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSE 350
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM GC P+ + YNTL++ L +L +A +++ M E+G
Sbjct: 351 ALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERG 397
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
Query: 6 FPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T N+LI G+V A +V+ L +P +YN++L L R++
Sbjct: 189 FPDVV-THNVLIDARFRAGDVDAAIALVDSMANRGL---KPGIVTYNSVLKGLCKHRRFD 244
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V++ M APD+ ++NI++ R+G++ + + EM +PD +++ L+
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ + + A L MK +G P + +T ++ G RAG++ DEM GC+
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL 364
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y ++ L A+ L + M +G P++ T+ ++I G+C G F+ A +
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + P+ + YN+L+ + G LA+A+E+ M
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDM 463
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++TYN ++ R G L + + L D+M P+ TY+IL+ + + A
Sbjct: 435 PDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGF 494
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M + G P++ + +++ G R+GN+ + F +M PD++ + +I YI
Sbjct: 495 LDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIK 554
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ A ++F+ M + P+ TYN +I GF G +A + K M G P+
Sbjct: 555 EENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYT 614
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y +L++ AG +A ++ M+ +G
Sbjct: 615 YMSLINGHVTAGNSKQAFQLHDEMIHRG 642
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 113/257 (43%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TF LI C G A ++ + ++ +L RP +YN+++ +
Sbjct: 393 MEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRL---RPDVVTYNSLIDGMCR 449
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ M P+ +TY+I++ + G+++ LDEM + G P+ T
Sbjct: 450 KGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRT 509
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ + L M++ P ++ F TL+ G + N+ F+ M
Sbjct: 510 YNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIME 569
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PD V Y ++I + G ++ A +F GM G P+ +TY S+I G AG
Sbjct: 570 KEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSK 629
Query: 238 EACTMMKEMESRGCNPN 254
+A + EM RG P+
Sbjct: 630 QAFQLHDEMIHRGFAPD 646
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 142/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G A T+N LI C G++ A + +K + P ++YN ++HAL
Sbjct: 345 MVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIM---PSVSTYNLLVHALFM 401
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M +G PD +TYNI++ R G + L +EM G P T
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++VL + ++ A +L + + G P V+ F ++DG GN++ EM
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMD 521
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD V + ++ G++E+A+ L D M +G P+ +YN++I G+ G
Sbjct: 522 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIK 581
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEKG 285
+A + EM S G NP L YN L+ L G LAE E+++ MV KG
Sbjct: 582 DAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAE--ELLKEMVNKG 629
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 116/218 (53%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M ++G P I T N ++ +L +++ L EM R S +T+NI+++VL K
Sbjct: 202 FYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCK 261
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A + M+ +GF P+V+ + T++ G S GN++ + D M KG PD
Sbjct: 262 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 321
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I+ G LE+A LFD M+ G +PN TYN++I G+C G + A + EM
Sbjct: 322 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 381
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ YN LV L G++ EA ++I+ M +KG
Sbjct: 382 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 138/294 (46%), Gaps = 6/294 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F++L+ C E+ A + + F K P + N +L L + + ++ +Y +M
Sbjct: 181 VFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM 240
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ + T+NI++ + GKL + + M GF P+ +YN ++H
Sbjct: 241 FRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNI 300
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L+ M+ G +P + +L+ G+ + G L+ FD+M G +P+ V Y +
Sbjct: 301 EGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTL 360
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I Y G+LE+A D M+ KG +P+V TYN ++ M G+ EA M+KEM +G
Sbjct: 361 IDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGI 420
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
P+ + YN L++ G +A ++ M+ KG Y L+ R R
Sbjct: 421 IPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + T+ LI C G + A + ++ ++ L P +YN ++
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV---PNAVTYNTLIDGYCNKGDL 370
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +M +G P + TYN+++ A + G++ + ++ EM + G PD TYNIL
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + A +L N M G +P+ + +T+L+ LSR + F+++ ++G
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDV+ + M+ + A G +E+A L M K P+ T+N++++G C GK +EA
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM+ RG P+ + YNTL+S G + +A V M+ G
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 154/333 (46%), Gaps = 47/333 (14%)
Query: 8 TTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA---------- 54
+T TFNI++ C G++ AR+ + F++ F+P SYN I+H
Sbjct: 247 STVYTFNIMVNVLCKEGKLKKAREFIG-FMEG--LGFKPNVVSYNTIIHGYSSRGNIEGA 303
Query: 55 --LLGIRQYKLIE-----------------------WVYQQMSDEGYAPDILTYNIVMCA 89
+L + K IE ++ +M + G P+ +TYN ++
Sbjct: 304 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 363
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
G L++ DEM + G P TYN+L+H L + A +++ M++ G P
Sbjct: 364 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 423
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + L++G SR GN +EM +KG P V YT +I +++A DLF+
Sbjct: 424 AITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 483
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
++ +G P+V +N+M+ G C G + A ++KEM+ + P+ + +NTL+ G
Sbjct: 484 KILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 543
Query: 270 KLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
K+ EA ++ M +G Y L+S + R
Sbjct: 544 KVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 576
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G A T+NILI G A+K + + P +Y ++++ L +
Sbjct: 415 MRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNR 474
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + +++++ D+G +PD++ +N ++ G +++ LL EM R PD T+N
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + K A LL+ MK G P + + TL+ G R G++ DEM + G
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIG 594
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
P ++ Y +I E + A++L M+ KG P+ TY S+I G
Sbjct: 595 FNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++ N +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRLKSVML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
K + +M ++ +PD++ Y +I G+L++A DL D M KG P+ TY ++I
Sbjct: 265 LAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + +VY L+S L G+ +A +++R M+
Sbjct: 325 BGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVRLK 384
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 385 PDTGTYTMIINEF 397
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+E+ G+ + +NIL+H K A ++ + + + G PSV+ TLM+G R
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRL 190
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G+LD M G PDV Y+V+I +++ A + FD M+ KG +PN T+
Sbjct: 191 GDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTF 250
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++I G C G+ D A + K+M S+ P+ + YNTL+ L G L +AH++I M
Sbjct: 251 TTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSM 310
Query: 284 KG 285
KG
Sbjct: 311 KG 312
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 128/301 (42%), Gaps = 41/301 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP S N +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSXNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM----------- 106
+ + M G PD+ TY++++ + K+D + DEM
Sbjct: 190 LGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVT 249
Query: 107 -----------GRSGFS-------------PDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GR + PD TYN L++ L K A +L++ M
Sbjct: 250 FTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMS 309
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + +TTL+BG + G+LD+ M + D V YT +I+ G
Sbjct: 310 MKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSV 369
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A+ + M++ P+ TY +I FC G + ++KEM+ G P+ + YN L+
Sbjct: 370 DAEKMLREMLSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLM 429
Query: 263 S 263
+
Sbjct: 430 N 430
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G T+++LI + E F + + P ++ ++ +
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLIDGHCKNGR 262
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L + +Y+QM + PD++TYN ++ + G L Q H L+D+M G PD TY
Sbjct: 263 VDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKITYTT 322
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K +A M + + +T L+ GL + G + EM +
Sbjct: 323 LIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVR 382
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
PD YT++I + G++ K L M G P+V TYN ++ G
Sbjct: 383 LKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G+ S+ F LM + G++ + FD + G P VV ++ YI G+L+
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLD 194
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M+ G P+V+TY+ +I G C K D+A EM +G PN + + TL+
Sbjct: 195 EGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGVTFTTLI 254
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ A E+ + M+ + L++
Sbjct: 255 DGHCKNGRVDLAKEIYKQMLSQSLLPDLIT 284
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F++E+ G + + +++ + G++ AQ +FD + G P+V + N+++ G+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYI 188
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L K+ +A+E M+ KG
Sbjct: 189 RLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKG 242
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 140/276 (50%), Gaps = 6/276 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+++LI C ++ A +V+++ I++ + +P Y ++ A + +Y++ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGV---KPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PD+ YN ++ R K+++ LL +MG G P+ HTY +++ K
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A M G P+ + +T L+ G GN F M KG +PD+ Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I S G+ ++A +F + G +P+VF YNS+I GFC G ++A + EM
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G NPN +VYNTL++ L G++ +A E+ + EK
Sbjct: 690 NGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 3 ENGFPTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
E FPT N++ + +GL KV +++K+ P +Y ++ A +
Sbjct: 201 EGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV---PDVYTYTNVIKAHCKVGD 257
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V +M E P++ TYN + + G +D+ + M G PD HTY +
Sbjct: 258 VIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTL 316
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + A + M G +P+ +T L+DG + GN++ DEM +G
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG 376
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+VV Y MI AGE+ KA LF+ M+ G P+ +TYN +I G+ + +AC
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKAC 436
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM++R P+ Y+ L+S L ++ L +A+EV+ M+ G
Sbjct: 437 ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+ +L+ C A+ + E S L P + +Y A++ +
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGL---NPNRFTYTALIDGFIK 358
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G +++TYN ++ + G++ + L +EM +G PD T
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+ K A LL MK PS ++ L+ GL + +L D+M
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V Y +I +Y+ E A +L MI G LP++F YN +I G C A K +
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ +M +G PN Y ++ +G++ A + M+ G
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL--ARKVVER---FIKSKLFNFRPFKNSYNAILHAL 55
MI NG +N LI +GL A+KV E + +P ++Y A ++
Sbjct: 512 MIANGVLPDLFCYNCLI-----IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ ++ E ++ M G P+ + Y I++ +G + M G PD
Sbjct: 567 SKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI 626
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
Y+ ++H L K K A+ + + G P V + +L+ G + G+++ +DE
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G P++V Y +I GE+ KA++LFD + K +P+V TY+++I G+C +G
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGN 746
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + EM S+G +P+ +Y L+ G L +A + +K
Sbjct: 747 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKS 796
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N I C G V A +V + ++ L P ++Y ++ ++ K + ++
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGL---GPDGHTYTLLVDGFCKQKRSKEAKLIF 334
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G P+ TY ++ + G +++ R+ DEM G + TYN ++ + K
Sbjct: 335 ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A++L N M G +P + L+DG ++ ++ EM + P Y
Sbjct: 395 GEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+V+I+ + +L+KA ++ D MI G PNVF Y ++I+ + +++ A ++K M +
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ YN L+ L A K+ EA ++ M EKG
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 141/278 (50%), Gaps = 11/278 (3%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI C G++ A ++ + + + + P YN +++ L + + ++
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGI---NPNIVVYNTLINGLCKLGEVTKARELFD 720
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ ++ PD++TY+ ++ + G L + +L DEM G SPD + Y IL+ GK
Sbjct: 721 EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780
Query: 130 KPLAALNLLN--HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL+L + K VG S+ F +L+D + G + + FD+M +K P++V
Sbjct: 781 NLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVT 837
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT++I +Y A +E+A+ LF M T+ +PN TY S++ + G + ++ K+ME
Sbjct: 838 YTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME 897
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+RG + + Y + S GK EA +++ + +G
Sbjct: 898 ARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 935
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N+LI + K E + K P +Y+ ++ L
Sbjct: 407 MLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V QM G P++ Y ++ A + + + LL M +G PD YN
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + K A LL M E G P+ + ++ S++G + + +F +M + G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+ V YT++I + G +A F M+ KG +P++ Y+++I GK EA
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + G P+ +YN+L+S G + +A ++ M+ G
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 81 LTYNIVMCAKYR-LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
LT + K+R LG L++ + GF P N L+ L K + +
Sbjct: 172 LTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYG 231
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M E P V +T ++ + G++ K EM K C P++ Y I G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+++A ++ M+ KG P+ TY ++ GFC + EA + + M S G NPN Y
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L+ G + EA + M+ +G +++V+
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 125/322 (38%), Gaps = 40/322 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ NG +N LI C GEV AR++ + + L P +Y+ I+
Sbjct: 687 MLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLV---PDVVTYSTIIDGYCK 743
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--CAKY----------------RLGKLDQF 99
++ +M +G +PD Y I++ C K +G L F
Sbjct: 744 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAF 803
Query: 100 HRLLDEMGRSG----------------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
+ L+D + G +P+ TY IL+ GK + A L M+
Sbjct: 804 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 863
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P+ L +T+L+ ++ GN F +M +G D + Y VM ++Y G+ +
Sbjct: 864 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A L + + +G ++++I C + ++ EM + + NTL+
Sbjct: 924 ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
+G EA +V+ M G
Sbjct: 984 GFYKSGNEDEASKVLGVMQRLG 1005
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 6/208 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-R 59
M++ T+ ILI G+ + + + F+ + N P +Y ++L + I
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++K+I +++ M G A D + Y ++ A + GK + +LL++ G + ++
Sbjct: 886 RFKMIS-LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 944
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K + L LL+ M + S TL+ G ++GN D M
Sbjct: 945 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 1004
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDL 207
G +P ++ +T I+ G + D+
Sbjct: 1005 GWVPT----SLSLTDSISTGRDDMKSDI 1028
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G TF+IL+ + ++ + +P +Y AI+ + Q
Sbjct: 173 MIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQ 232
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M EG P++ YNI++ + ++D+ L EM +PD TYNI
Sbjct: 233 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 292
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K +L L++ M+ +G ++ + +L+ L + +LD E+ ++G
Sbjct: 293 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 352
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V YT +I G LE A +F ++T+G V+TYN MI G C G FDEA
Sbjct: 353 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEAL 412
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ ME C P+ + Y T++ L G+ + ++++ M+ +G
Sbjct: 413 ALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRG 457
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 147/292 (50%), Gaps = 11/292 (3%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVER-FIKSKLFNFRPFKNSYNAILHALL 56
++ +GF ++ IL +C GE A +++ + ++ + + Y+ I+ +L
Sbjct: 106 VVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNADVV-------MYSTIIDSLC 158
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ +Y +M +G P++ T++I++ A + K Q LL M + G P+
Sbjct: 159 KGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVV 218
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY ++ ++ ALN+ N M + G +P+V + +++GL + +D F EM
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
K PDVV Y ++I G++ + +L D M + G+ ++ TYNS++ C
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
D+A T++KE++ +G PN Y TL+ L G+L +A+ + + ++ +G +I
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHI 390
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 138/293 (47%), Gaps = 11/293 (3%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
NG + T IL+ C G + ++ + +K + P ++ ++ + L +
Sbjct: 39 NGIKPSIVTLTILMNCYCHTGGITFLFSILTKILK---MGYEPNSITFTTLIKGMCLNGQ 95
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Y+ + + + + G+ D ++Y I+M ++G+ ++L ++ + D Y+
Sbjct: 96 AYEALLF-HDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR---KTWVNADVVMYS 151
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L KG A L + M G P+V F+ L+D L + M K
Sbjct: 152 TIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK 211
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+VV Y ++ Y ++ KA ++F+ M+ +G PNV+ YN +I G C + DEA
Sbjct: 212 GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEA 271
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ KEM + NP+ + YN L+ L GK++ + E++ M GK + +++
Sbjct: 272 MNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIIT 324
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 62/139 (44%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M ++ P +L F ++ L + + F ++ G P +V T+++ Y G
Sbjct: 1 MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ + ++ G PN T+ ++I+G C+ G+ EA + + G + + Y
Sbjct: 61 ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120
Query: 261 LVSNLRNAGKLAEAHEVIR 279
L++ L G+ A +++R
Sbjct: 121 LMNGLCKMGETRAAMQMLR 139
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 132/279 (47%), Gaps = 13/279 (4%)
Query: 20 CGEVGLARKVVERFIKSKLFN-------------FRPFKNSYNAILHALLGIRQYKLIEW 66
C RKV+E +K K F + +N ++H ++ +
Sbjct: 104 CVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKEGDIRVAQS 163
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ ++ G P +++YN +M RLG LD+ RL M SG PD +TY++L++ L
Sbjct: 164 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLC 223
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A L + M E G P+ + FTTL+DG + G +D + +M ++ +PD+V
Sbjct: 224 KESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLV 283
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I G+L++A DL D M G P+ TY ++I G C G D A K M
Sbjct: 284 TYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMM 343
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + Y L+S L G+ +A +++R M+ G
Sbjct: 344 IQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 136/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D ++L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K A+ + M P ++ + L+ GL + G+L DEM+
Sbjct: 250 FTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF T+NILI C G + LA +V+++ +K N +P +Y ++ A +
Sbjct: 172 MKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKD---NCKPTVITYTILIEATIT 228
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M G PD TYN+V+ + G LD+ L + ++G T
Sbjct: 229 QGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVST 288
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNILL L K L++ M G +P+ + ++TL+ L R G +D K M
Sbjct: 289 YNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMK 348
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD Y +I++ G+++ A + D MI+ G LP++ +YNS++ C G D
Sbjct: 349 EKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNAD 408
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +++ GC PN YNTL L ++G A +I M+ G
Sbjct: 409 EALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNG 456
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 120/251 (47%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +YNA++ + V +M G+ PD++TYNI++ G+LD R
Sbjct: 143 KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALR 202
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
++D++ + P TY IL+ A+ LL+ M G P + +++G+
Sbjct: 203 VMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMC 262
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G LD F ++ GC+ V Y +++ + G+ E + L M+ KG PN
Sbjct: 263 KEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPI 322
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+++I C GK DEA ++K M+ + P+ Y+ L+S L GK+ A E + M
Sbjct: 323 TYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDM 382
Query: 282 VEKGKYIHLVS 292
+ G ++S
Sbjct: 383 ISGGHLPDILS 393
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 112/220 (50%), Gaps = 1/220 (0%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ Q M + GY PD++ ++ + + K+++ ++++ + + G PD YN ++
Sbjct: 98 YFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGF 156
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K D+ A +L+ MK+ GF+P V+ + L+ G LD D++ C P V
Sbjct: 157 CKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTV 216
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ YT++I + I G +++A L D M+++G P+ +TYN ++ G C G D A +
Sbjct: 217 ITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSR 276
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ GC YN L+ +L N GK +++ M+ KG
Sbjct: 277 ISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKG 316
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 119/259 (45%), Gaps = 3/259 (1%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P +Y+ ++ AL + + V + M ++ APD +Y+ ++ A R GK+D
Sbjct: 318 EPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIE 377
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LD+M G PD +YN +L L K ALN+ + EVG P+ + TL L
Sbjct: 378 FLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALW 437
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNV 220
+G+ EM + G PD + Y +I+ G +++A +L M + P V
Sbjct: 438 SSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTV 497
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+YN+++ G C + +A ++ M + GC PN Y L+ + AG +A E+
Sbjct: 498 ISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANL 557
Query: 281 MVEKGKYIHLVSKFKRYKR 299
+V FKR+++
Sbjct: 558 LVNMDAISE--DSFKRFQK 574
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 154 TTLMDGLSRA---GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
T M L+R+ D YF M N+G PDV+ T +I + ++EKA + +
Sbjct: 78 TNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEI 137
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ G+ P+VF YN++I GFC A + D A ++ M+ RG P+ + YN L+ N G+
Sbjct: 138 LEKHGK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGR 196
Query: 271 LAEAHEVIRHMVE 283
L A V+ +++
Sbjct: 197 LDLALRVMDQLLK 209
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 3/174 (1%)
Query: 114 DFHTYNIL--LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
DF N + L+ K K +L L HM G+ P V+ T L+ G ++
Sbjct: 74 DFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQ 133
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
E+ K PDV Y +I+ + A ++ A + D M +G P+V TYN +I FC
Sbjct: 134 VM-EILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFC 192
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ D A +M ++ C P + Y L+ G + EA +++ M+ +G
Sbjct: 193 GRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRG 246
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + +L + V+ ++ G P ++++N +M RLG LD+ RL M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L N M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ ++ ++G PD++ Y +I G+L++A+DL D M K P+ TY ++I
Sbjct: 259 LAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 379 PDNGTYTMIINEF 391
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K + RP S+N ++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITK---WGLRPSVVSFNTLMSGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D+ + L +EM +G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + + GF P ++ + TL+ GL + G+L + DEM+
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD + YT +I G+LE A + MI + + Y ++I G C G+
Sbjct: 304 MKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++ M S G P+ Y +++ G + ++++ M G
Sbjct: 364 DAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDG 411
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 69/156 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+Q+ +G++PD++TYN ++ + G L Q L+DEM PD TY L+
Sbjct: 263 IYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + M + G PD
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G+++ L M G +P V T
Sbjct: 383 TYTMIINEFCKKGDVKTGSKLLKEMXRDGHVPCVVT 418
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + F P +YN ++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQ---GFSPDLITYNTLIFGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +MS + PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMX 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGHVPCVV 417
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 7/222 (3%)
Query: 67 VYQQMSDEGYAPDILTYNI---VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ M + G D+ ++N V+C R+ K + R L R FS D TYN++L+
Sbjct: 142 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL----RGRFSVDTVTYNVILN 197
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ L +L M E G +P++ + T++ G RAG + FF EM + C
Sbjct: 198 GWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 257
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV YT ++ + AGE+++A+++FD MI +G LP+V TYN+MI+ C + A M
Sbjct: 258 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 317
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM RG PN YN L+ L +AG+ + E+++ M +G
Sbjct: 318 EEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 359
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+ +TF I+ G K V+ F+ S+N IL L ++ + ++
Sbjct: 119 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 178
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ + ++ D +TYN+++ + + + +L EM G +P+ TYN +L +
Sbjct: 179 RALRGR-FSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRA 237
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A MK+ + V+ +TT++ G AG + + FDEM +G +P V Y
Sbjct: 238 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 297
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
MI +E A +F+ M+ +G PNV TYN +IRG AG+F +M+ ME+
Sbjct: 298 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 357
Query: 249 RGCNPNFLVYNTLV 262
GC PNF YN ++
Sbjct: 358 EGCEPNFQTYNMMI 371
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 11/258 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN IL+ I++ V ++M + G P++ TYN ++ +R G++ EM
Sbjct: 191 TYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 250
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ D TY ++H G + A N+ + M G PSV + ++ L + N+
Sbjct: 251 KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNV 310
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F+EM +G P+V Y V+I AGE + ++L M +G PN TYN M
Sbjct: 311 ENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMM 370
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS---------NLRNAGKLAEAHEV 277
IR + + ++A + ++M S C PN YN L+S ++ AG A A E+
Sbjct: 371 IRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEI 430
Query: 278 IRHMVEKGKYIHLVSKFK 295
+R + G L+ KF+
Sbjct: 431 LRLQSKSGS--RLLRKFR 446
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 1/210 (0%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y D ++++ + RL L+ M P T+ I+ KP A+
Sbjct: 81 YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAV 140
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L +M E G + F T++D L ++ ++ F + + + D V Y V++ +
Sbjct: 141 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGW 199
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
K ++ M+ +G PN+ TYN+M++GF AG+ A EM+ R C +
Sbjct: 200 CLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDV 259
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T+V AG++ A V M+ +G
Sbjct: 260 VTYTTVVHGFGVAGEIKRARNVFDEMIREG 289
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 2/195 (1%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
QF LD R + D ++++ + + + +L++ M+ + PS F +
Sbjct: 69 QFFHFLDNHHRE-YVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVA 127
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ + AG D F M GC D+ + ++ + +EKA +LF + + +
Sbjct: 128 ERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV 187
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
V TYN ++ G+C+ + + ++KEM RG NPN YNT++ AG++ A E
Sbjct: 188 DTV-TYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEF 246
Query: 278 IRHMVEKGKYIHLVS 292
M ++ I +V+
Sbjct: 247 FLEMKKRDCEIDVVT 261
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 1/283 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+E F +FNILI +G K E F F P SYN +++ + +
Sbjct: 206 LEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEI 265
Query: 62 -KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + + M +G +PD++TY ++ +LG + L DEM SG P+ T+N+
Sbjct: 266 SKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNV 325
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ GK +A+ + M +G P V+ FT+L+DG R G ++ ++EM +
Sbjct: 326 LIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN 385
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V Y V+I + + +A++ + + +P F YN +I GFC AGK DEA
Sbjct: 386 LSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEAN 445
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ EM+ + C P+ + + L+ G++ EA M+E
Sbjct: 446 FIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P S+N ++ L I + +Q M + G PDI++YN ++ R+ ++ + H
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269
Query: 101 RLLDE-MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL E M G SPD TY ++ K AA L + M G P+ F L+DG
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ GN+ + +++M GC+PDVV +T +I Y GE+ + L++ M + PN
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPN 389
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V+TY +I C + EA ++ ++S P +YN ++ AGK+ EA+ ++
Sbjct: 390 VYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449
Query: 280 HMVEK 284
M EK
Sbjct: 450 EMQEK 454
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
N+Y+ ++ L + + V+ M +G PD +++ + R+GKLD L+E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ G YN LL++L K + A+ L E F P V F L+ GL R G
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-DGMITKGQLPNVFTYN 224
+D FF M N GC PD+V Y +I + E+ K DL + M+ KG P+V TY
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I G+C G A + EM S G PN +N L+ G + A + M+
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349
Query: 285 G 285
G
Sbjct: 350 G 350
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +I C G++ A ++ + + S + +P ++N ++
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGI---KPNDFTFNVLIDGFGK 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y++M G PD++T+ ++ R G+++Q +L +EM SP+ +T
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L++ L K ++ A N L H+K P + ++DG +AG +D + EM
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K C PD + +T++I G + +A F MI +P+ T NS+I AG +
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512
Query: 238 EA 239
EA
Sbjct: 513 EA 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Query: 105 EMGRSGFSPD--FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
E R+ S + F+TY++L+ L K +A + + M+ G P L+ +R
Sbjct: 97 EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYAR 156
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G LD+ K F +E+ G Y ++ + +++A LF + +P+V++
Sbjct: 157 MGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS 216
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH-M 281
+N +IRG C G+ D+A + M + GC P+ + YNTL++ ++++ H++++ M
Sbjct: 217 FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDM 276
Query: 282 VEKG 285
+ KG
Sbjct: 277 LIKG 280
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 133/294 (45%), Gaps = 6/294 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ L E+G+ + E F+K + F P S NA+LH L + + L ++ M
Sbjct: 187 VFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM 246
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G + TYNI++ + G L+ L +M +GF+PD TYN L+ GK
Sbjct: 247 GAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLL 306
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ + MK+ DP V+ + L++ + + F EM G P+VV Y+
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 366
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I ++ G L++A F M PN FTY S+I C AG EA +++E+ G
Sbjct: 367 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGI 426
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
N + Y L+ L G++ EA EV R M+ G Y LV F + K
Sbjct: 427 KLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 143/286 (50%), Gaps = 10/286 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIR 59
G + T+NI+I C G++ +AR + F + K F P +YN+++ H LG+
Sbjct: 250 GIKRSVFTYNIMIDYLCKEGDLEMARSL---FTQMKEAGFTPDIVTYNSLIDGHGKLGLL 306
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +++QM D PD++TYN ++ + ++ + L EM +G P+ TY+
Sbjct: 307 DECIC--IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYS 364
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+ K A+ M+ V P+ +T+L+D +AGNL +E+
Sbjct: 365 TFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA 424
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +VV YT ++ G +++A+++F M+ G PN TY +++ GF A + + A
Sbjct: 425 GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA 484
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+ + P+ L+Y T++ L N +L EA +I + E G
Sbjct: 485 KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 530
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 142/286 (49%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-R 59
M E GF T+N LI G++GL + + F + K + P +YNA+++ R
Sbjct: 281 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 340
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
K E++++ M G P+++TY+ + A + G L + + +M R +P+ TY
Sbjct: 341 MPKAFEFLHE-MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K AL L+ + + G +V+ +T L+DGL G + + F M N
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ YT ++ +I A E+E A+D+ M K P++ Y +++ G C + +EA
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ E++ G N N ++Y TL+ +G+ EA ++ M++ G
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 141/320 (44%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++ G T+ L+ E G ++ E F P + +Y A++H + ++
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + ++M ++ PD+L Y ++ +L++ L+ E+ SG + + Y
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 540
Query: 121 LLHVLGKGDKPLAALNLLNHM-----------------------------------KEVG 145
L+ K + AL LL M E+G
Sbjct: 541 LMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P+V +T L+DGL + + K FDEM +KG MPD + YT +I + G L++A
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 660
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L D MI G ++ Y ++I G +G+ +A ++ EM +G P+ +VY L+
Sbjct: 661 NLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKY 720
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
GK+ EA E+ M ++G
Sbjct: 721 YALGKVDEALELQNEMAKRG 740
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 126/289 (43%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-- 58
M NG T++ I + G+ ++ ++ F+ + P + +Y +++ A
Sbjct: 351 MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGN 410
Query: 59 --RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
KL+E + Q G +++TY ++ G++ + + M +G +P+
Sbjct: 411 LAEALKLVEEILQA----GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQE 466
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L+H K + A ++L MKE P +L + T++ GL L+ K E+
Sbjct: 467 TYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEI 526
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G + V YT ++ +Y +G+ +A L + M+ G + TY ++I G C +G
Sbjct: 527 KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLV 586
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA M G PN VY LV L A ++ M++KG
Sbjct: 587 QEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 12/238 (5%)
Query: 44 FKNSYNAILHALLGIRQ-------YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
F + NA+L L+ +R+ + L+ W + + G+ ++ + A LG L
Sbjct: 147 FYSDANAVLKELICLRRVLPSWDVFDLL-WATRNVCVPGFG----VFDALFSALIELGML 201
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
++ +M + P + N LLH L K + + M G SV + +
Sbjct: 202 EEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIM 261
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+D L + G+L+ + F +M G PD+V Y +I + G L++ +F+ M
Sbjct: 262 IDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADC 321
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
P+V TYN++I FC + +A + EM++ G PN + Y+T + G L EA
Sbjct: 322 DPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 379
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 76/153 (49%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +MS+ G P++ Y ++ + + +L DEM G PD Y L+ K
Sbjct: 593 FGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMK 652
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
ALNL + M E+G + + +T L+ GLS +G + + DEM KG +PD V
Sbjct: 653 HGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVV 712
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
Y +I Y A G++++A +L + M +G + +
Sbjct: 713 YMCLIKKYYALGKVDEALELQNEMAKRGMITGL 745
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 24/230 (10%)
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV-MCAKYRLG-KLDQFHRLLDEMGRSGFSPDF 115
+R+ + ++ + D AP + +V +C RL + ++ + GR GF
Sbjct: 78 VREQRWDDFRIVSLFDSALAPIWASRVLVELCQDARLALRFFEWAK-----GRIGFQHTS 132
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
Y IL+H+L A +L KE+ VL + D L N+
Sbjct: 133 EAYCILVHILFCARFYSDANAVL---KELICLRRVLPSWDVFDLLWATRNV--------- 180
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
C+P + + ++ I G LE+A + F M P + N+++ G+
Sbjct: 181 -----CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGR 235
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D + K+M + G + YN ++ L G L A + M E G
Sbjct: 236 GDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 285
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 149/318 (46%), Gaps = 35/318 (11%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A TFN++I +GL K +E F + L N P +Y+ ++H L + +
Sbjct: 170 ALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLD 229
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M EG P+++ +N+++ A + G L + +L+D M G P+ TYN L+H L
Sbjct: 230 EMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKG 289
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDG------------------------------ 159
K A++LLN M P+ + F TL++G
Sbjct: 290 KLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYS 349
Query: 160 -----LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L + G + + EM KGC P+ + Y+ +I G+L++A+ M K
Sbjct: 350 SLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNK 409
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G LPN FTY+S++RG+ AG +A + KEM + C N + Y+ L++ L GK EA
Sbjct: 410 GYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEA 469
Query: 275 HEVIRHMVEKGKYIHLVS 292
V + M+ +G + +V+
Sbjct: 470 LMVWKQMLSRGIKLDVVA 487
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 142/282 (50%), Gaps = 7/282 (2%)
Query: 9 TARTFNILICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHAL--LGIRQYKL 63
T ++FN ++ + GL + +E + + SK N P ++N ++ A+ LG+ K
Sbjct: 131 TVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD-KA 189
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
IE V++++ APD TY+ +M + ++D+ LLDEM G P+ +N+L+
Sbjct: 190 IE-VFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLIS 248
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K A L+++M G P+ + + L+ GL G L+ ++M + C+P
Sbjct: 249 ALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVP 308
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ V + +I ++ G + + +G N + Y+S+I G C GKF++A +
Sbjct: 309 NDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELW 368
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
KEM +GC PN +VY+ L+ L GKL EA + M KG
Sbjct: 369 KEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKG 410
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 149/279 (53%), Gaps = 4/279 (1%)
Query: 11 RTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGIRQY-KLIEWVY 68
+ F ++ G+ L K V+ F + F + S+N++L+ ++ + + +E+
Sbjct: 97 KNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYN 156
Query: 69 QQMSDEGYA--PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ + P+ LT+N+V+ A RLG +D+ + E+ +PD +TY+ L+H L
Sbjct: 157 HVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLC 216
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K ++ A++LL+ M+ G P+++ F L+ L + G+L D M KGC+P+ V
Sbjct: 217 KEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEV 276
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ G+LEKA L + M++ +PN T+ ++I GF M G+ + ++ +
Sbjct: 277 TYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSL 336
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E+RG N VY++L+S L GK +A E+ + MV KG
Sbjct: 337 EARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKG 375
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 141/292 (48%), Gaps = 9/292 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVER-FIKSKLFNFRPFKNSYNAILHALLG 57
+E FP FN+LI C G++G A K+V+ F+K + P + +YNA++H L
Sbjct: 233 VEGTFPNLV-AFNVLISALCKKGDLGRAAKLVDNMFLKGCV----PNEVTYNALVHGLCL 287
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + QM P+ +T+ ++ G+ R+L + G + +
Sbjct: 288 KGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYV 347
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L K K A+ L M G P+ + ++ L+DGL R G LD + F EM
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG +P+ Y+ ++ Y AG+ KA ++ M + N Y+ +I G C GKF
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
EA + K+M SRG + + Y++++ NA + + ++ M+ +G +
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQ 519
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 109/221 (49%), Gaps = 2/221 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y++++ L ++ ++++M +G P+ + Y+ ++ R GKLD+ L EM
Sbjct: 348 YSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMK 407
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G+ P+ TY+ L+ + A+ + M + + ++ L++GL + G
Sbjct: 408 NKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFM 467
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL--PNVFTYNS 225
+ +M ++G DVV Y+ MI + A +E+ LF+ M+ +G + P+V TYN
Sbjct: 468 EALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNI 527
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
++ FC+ A ++ M +GC+P+F+ + + LR
Sbjct: 528 LLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLR 568
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL---PNVFTYNSMIRGFCMAGKFD 237
C V + ++ + G +A + ++ ++ L PN T+N +I+ C G D
Sbjct: 128 CKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVD 187
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A + +E+ R C P+ Y+TL+ L ++ EA ++ M +G + +LV+
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVA 242
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 148/287 (51%), Gaps = 5/287 (1%)
Query: 9 TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T+ FN LI T G + A+ V+ + S + P +YN++++ L
Sbjct: 346 TSVIFNTLIHGFVTHGRLDDAKAVLSDMVTS--YGIVPDVCTYNSLIYGYWKKGLVGLAL 403
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V + M ++G P++ +Y I++ +LGK+D+ + LL+EM G P+ +N L+
Sbjct: 404 EVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAF 463
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + A+ + M G P V F +L+ GL + + +M ++G + +
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I +++ GE+++A+ L + M+ +G L + TYNS+I+G C AG+ D+A ++ ++
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M G P+ + N L++ L +G + EA E + MV +G +V+
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 630
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 144/290 (49%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G ++ IL+ C G++ A ++ L +P +N ++ A
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGL---KPNTVGFNCLISAF-- 463
Query: 58 IRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++++ E V +++M +G PD+ T+N ++ + ++ LL +M G +
Sbjct: 464 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 523
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L++ + + A L+N M G + + +L+ GL RAG +D + F++
Sbjct: 524 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEK 583
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +P + ++I +G +E+A + M+ +G P++ T+NS+I G C AG+
Sbjct: 584 MLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 643
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ TM +++++ G P+ + YNTL+S L G + +A ++ +E G
Sbjct: 644 IEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDG 693
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 139/305 (45%), Gaps = 35/305 (11%)
Query: 20 CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
C V A +++E L P ++N ++ L + + +M G+ PD
Sbjct: 259 CNRVNEALQLLEEMF---LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPD 315
Query: 80 ILTYNIVM----------CAK---YRL------------------GKLDQFHRLLDEMGR 108
+TY +M AK YR+ G+LD +L +M
Sbjct: 316 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVT 375
Query: 109 S-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
S G PD TYN L++ K AL +L M+ G P+V +T L+DG + G +D
Sbjct: 376 SYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKID 435
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+EM+ G P+ V + +I+++ + +A ++F M KG P+V+T+NS+I
Sbjct: 436 EAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 495
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
G C + A ++++M S G N + YNTL++ G++ EA +++ MV +G
Sbjct: 496 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSL 555
Query: 288 IHLVS 292
+ ++
Sbjct: 556 LDEIT 560
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
+++ P SYN +L L+ +K+ V+ M P + T+ +VM A + ++D
Sbjct: 169 VYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVD 228
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL------------------- 138
+L +M + G P+ Y L+H L K ++ AL LL
Sbjct: 229 SALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 288
Query: 139 ----------------NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF--------- 173
N M GF P + + LM+GL + G +DA K F
Sbjct: 289 LGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSV 348
Query: 174 -----------------------DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
D + + G +PDV Y +I Y G + A ++
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M KG PNV++Y ++ GFC GK DEA ++ EM + G PN + +N L+S +
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468
Query: 271 LAEAHEVIRHMVEKG 285
+ EA E+ R M KG
Sbjct: 469 IPEAVEIFREMPRKG 483
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 124/265 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G FN LI + + VE F + +P ++N+++ L + +
Sbjct: 444 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 503
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K W+ + M EG + +TYN ++ A R G++ + +L++EM G D TYN
Sbjct: 504 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNS 563
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A +L M G PS + L++GL R+G ++ F EM +G
Sbjct: 564 LIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRG 623
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V + +I AG +E +F + +G P+ TYN+++ C G +AC
Sbjct: 624 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC 683
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
++ E G PN ++ L+ +L
Sbjct: 684 LLLDEGIEDGFVPNDRTWSILLQSL 708
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 3/239 (1%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+R + Y ++ L ++K I+ + QM DEG + +M + G Q
Sbjct: 101 YRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFPGQTT 160
Query: 101 RLLDEMGRSGFS--PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
RL+ EM R+ +S P F +YN++L +L G+ A N+ M P++ F +M
Sbjct: 161 RLMLEM-RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMK 219
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L +D+ +M GC+P+ V Y +I S + +A L + M G +P
Sbjct: 220 ALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP 279
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ T+N +I G C + +EA M+ M RG P+ + Y L++ L G++ A ++
Sbjct: 280 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 1/180 (0%)
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G+ F Y +L+ LG + LL MK+ G F ++M +AG
Sbjct: 97 SQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIMRDYDKAGFP 156
Query: 167 DACKYFFDEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM N C P Y V++ ++ + A ++F M+++ P +FT+
Sbjct: 157 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 216
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ C + D A +++++M GC PN ++Y TL+ +L ++ EA +++ M G
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 276
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVV-ERFIKSKLFNFRPFKNSYNAILHALL 56
MI G T+N LI GE+ ARK+V E + L + + +YN+++ L
Sbjct: 514 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD----EITYNSLIKGLC 569
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++++M +G P ++ NI++ R G +++ EM G +PD
Sbjct: 570 RAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 629
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDE 175
T+N L++ L + + L + ++ G P + + TLM L + G + DAC DE
Sbjct: 630 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC-LLLDE 688
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEK 203
G +P+ +++++ S + L++
Sbjct: 689 GIEDGFVPNDRTWSILLQSLVPQETLDR 716
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 75/164 (45%), Gaps = 6/164 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C GEV AR + E+ ++ L P S N +++ L +
Sbjct: 560 TYNSLIKGLCRAGEVDKARSLFEKMLRDGLV---PSSISCNILINGLCRSGMVEEAVEFQ 616
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PDI+T+N ++ R G+++ + ++ G PD TYN L+ L KG
Sbjct: 617 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKG 676
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
A LL+ E GF P+ ++ L+ L LD ++
Sbjct: 677 GFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDRRTFY 720
>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 621
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 147/323 (45%), Gaps = 40/323 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T T+N LI G VG + K++E + + N +P +YN ++ A
Sbjct: 156 MKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDE--NVKPNDRTYNILIQAWCT 213
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + V +M G PD++TYN + A + G+ ++ RL+ +M + P+ T
Sbjct: 214 KKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNERT 273
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVG-------------------------------- 145
I++ K AL L MKE+G
Sbjct: 274 CGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLME 333
Query: 146 ---FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
P V+ F+T+M+ S AG +D C+ F++M G PD+ Y+++ Y+ AG+
Sbjct: 334 EFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPR 393
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA+ L M G NV + ++I G+C AGK D A ++ ++M G +PN Y TL+
Sbjct: 394 KAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLI 453
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
A + +A E++ M E+G
Sbjct: 454 WGYGEAKQPWKAEEILSTMEERG 476
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +Y ++ AL +++K I + +++D G PD + N ++ A GK+D+ +
Sbjct: 92 KPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDSGKVDEAMK 151
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGL 160
+ +M G P TYN L+ G +P ++ LL M ++ P+ + L+
Sbjct: 152 IFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRTYNILIQAW 211
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
L+ +M G PDVV Y M +Y GE EKA+ L M PN
Sbjct: 212 CTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQYNKVKPNE 271
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T +I G+C G EA + M+ G +PN +V+N+L+ +A E +
Sbjct: 272 RTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTL 331
Query: 281 MVEKG 285
M E G
Sbjct: 332 MEEFG 336
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 110/236 (46%), Gaps = 1/236 (0%)
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+++AL+G + + V+ +++EG+ P ++TY ++ A R + LL ++ +G
Sbjct: 66 LMNALIGKGKPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 125
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD N +++ K A+ + MKE G P+ + TL+ G G
Sbjct: 126 MKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESM 185
Query: 171 YFFDEMA-NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ M ++ P+ Y ++I ++ +LE+A ++ M+ G P+V TYN+M R
Sbjct: 186 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 245
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+ ++A ++ +M+ PN ++S G + EA + M E G
Sbjct: 246 YAQNGETEKAERLILKMQYNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELG 301
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 105/236 (44%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
N RT I+I + G + + + K P +N+++ L
Sbjct: 265 NKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNG 324
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ M + G PD++T++ +M A G +D + ++M ++G PD H Y+IL
Sbjct: 325 VDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILAK 384
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ +P A +LL M + G +V+ FTT++ G AG +D ++M G P
Sbjct: 385 GYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTSP 444
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
++ Y +I Y A + KA+++ M +G +P + T + + G F EA
Sbjct: 445 NLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEA 500
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 116 HTYNILLHVL-GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
H L++ L GKG KP A + +++ E G P+++ +TTL+ L+R +
Sbjct: 61 HARTKLMNALIGKG-KPHEAQAVFHNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLS 119
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++A+ G PD + MI ++ +G++++A +F M G P TYN++I+GF + G
Sbjct: 120 KVADNGMKPDSILLNAMINAFSDSGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVG 179
Query: 235 KFDEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ E+ +++ M + PN YN L+ KL EA V+ MV G
Sbjct: 180 RPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASG 231
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 89/226 (39%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G FN LI + V E + F +P +++ I++A
Sbjct: 297 MKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGL 356
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ M G PDI Y+I+ R G+ + LL M + G + +
Sbjct: 357 MDNCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTT 416
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K A +L M E+G P++ + TL+ G A + M +G
Sbjct: 417 IISGWCAAGKMDRAFSLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEEILSTMEERG 476
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+P++ ++ ++ A G ++A + +G + +L F + M
Sbjct: 477 VVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEFDSDKM 522
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM + P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++N TF LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 232 MLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ + M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 1/283 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+E F +FNILI +G K E F F P SYN +++ + +
Sbjct: 206 LEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEI 265
Query: 62 -KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + + M +G +PD++TY ++ +LG + L DEM SG P+ T+N+
Sbjct: 266 SKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNV 325
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ GK +A+ + M +G P V+ FT+L+DG R G ++ ++EM +
Sbjct: 326 LIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRN 385
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V Y V+I + + +A++ + + +P F YN +I GFC AGK DEA
Sbjct: 386 LSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEAN 445
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ EM+ + C P+ + + L+ G++ EA M+E
Sbjct: 446 FIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIE 488
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P S+N ++ L I + +Q M + G PDI++YN ++ R+ ++ + H
Sbjct: 210 FVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGH 269
Query: 101 RLLDE-MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL E M G SPD TY ++ K AA L + M G P+ F L+DG
Sbjct: 270 DLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDG 329
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ GN+ + +++M GC+PDVV +T +I Y GE+ + L++ M + PN
Sbjct: 330 FGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPN 389
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V+TY +I C + EA ++ ++S P +YN ++ AGK+ EA+ ++
Sbjct: 390 VYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVA 449
Query: 280 HMVEK 284
M EK
Sbjct: 450 EMQEK 454
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
N+Y+ ++ L + + V+ M +G PD +++ + R+GKLD L+E
Sbjct: 110 NTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSAKNFLNE 169
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ G YN LL++L K + A+ L E F P V F L+ GL R G
Sbjct: 170 VHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGE 229
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-DGMITKGQLPNVFTYN 224
+D FF M N GC PD+V Y +I + E+ K DL + M+ KG P+V TY
Sbjct: 230 IDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYT 289
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I G+C G A + EM S G PN +N L+ G + A + M+
Sbjct: 290 SIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLL 349
Query: 285 G 285
G
Sbjct: 350 G 350
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 6/242 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +I C G++ A ++ + + S + +P ++N ++
Sbjct: 276 MLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSSGI---KPNDFTFNVLIDGFGK 332
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y++M G PD++T+ ++ R G+++Q +L +EM SP+ +T
Sbjct: 333 VGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYT 392
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L++ L K ++ A N L H+K P + ++DG +AG +D + EM
Sbjct: 393 YAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKAGKVDEANFIVAEMQ 452
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K C PD + +T++I G + +A F MI +P+ T NS+I AG +
Sbjct: 453 EKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPDEITINSLISCLLKAGMPN 512
Query: 238 EA 239
EA
Sbjct: 513 EA 514
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Query: 105 EMGRSGFSPD--FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
E R+ S + F+TY++L+ L K +A + + M+ G P L+ +R
Sbjct: 97 EFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYAR 156
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G LD+ K F +E+ G Y ++ + +++A LF + +P+V++
Sbjct: 157 MGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYS 216
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH-M 281
+N +IRG C G+ D+A + M + GC P+ + YNTL++ ++++ H++++ M
Sbjct: 217 FNILIRGLCRIGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCRVNEISKGHDLLKEDM 276
Query: 282 VEKG 285
+ KG
Sbjct: 277 LIKG 280
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 147/306 (48%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 96 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 149
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +L + V+ ++ G P ++++N +M +LG L++ RL M SG PD
Sbjct: 150 FCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPD 209
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K L + M + G P+ + FTTL+DG + G +D +
Sbjct: 210 VYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 269
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD+V Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 270 QMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEG 329
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 330 DLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 389
Query: 289 HLVSKF 294
++++F
Sbjct: 390 MIINEF 395
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 137/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ + +
Sbjct: 132 LECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIKL 188
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 189 GDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGVTF 248
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 249 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSM 308
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 309 KGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEGRSVD 368
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M++EM S G P Y +++ G + ++++ M G +V+
Sbjct: 369 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 422
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ L+ C GE A K++ R I+ + + RP YN I+ L
Sbjct: 106 VVAQGFQMDQVSYATLLNGLCKIGETRSALKLL-RMIEDR--STRPNVVMYNTIIDGLCK 162
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M G P+++TY+ ++ G+L + LL+EM +P+ +T
Sbjct: 163 DKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYT 222
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ L K K A NLL M + G P+V+ + TLMDG G + K F M
Sbjct: 223 YTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMV 282
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V Y +MI + +++A +L ++ K +PN TY+S+I GFC G+
Sbjct: 283 QKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRIT 342
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++KEM RG + + Y +L+ L L +A + M E+G
Sbjct: 343 SALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 143/291 (49%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ T N L +C GEV + ++ + F+ + SY +L+ L I +
Sbjct: 75 GYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQ---GFQMDQVSYATLLNGLCKIGET 131
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + + + D P+++ YN ++ + +++ + L EM G P+ TY+ L
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + + A LLN M +P+V +T LMD L + G + K M +G
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV Y ++ Y GE++ A+ +F M+ KG PNV++YN MI C + + DEA
Sbjct: 252 KPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMN 311
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++E+ + PN + Y++L+ G++ A ++++ M +G+ +V+
Sbjct: 312 LLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVT 362
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 138/287 (48%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI T+ IL +C G+V A+ ++ K +P SYN ++
Sbjct: 211 MILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKE---GVKPNVVSYNTLMDGYCL 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + + ++ M +G P++ +YNI++ + ++D+ LL E+ P+ T
Sbjct: 268 IGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K + +AL+LL M G V+ +T+L+D L + NLD F +M
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ YT +I G + AQ LF ++ KG NV+TYN MI G C G D
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA M +ME GC P+ + + ++ +L + +A +++ M+ K
Sbjct: 448 EALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 139/283 (49%), Gaps = 7/283 (2%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T++ LI C G++ A ++ I L N P +Y ++ AL + K
Sbjct: 182 FPNVI-TYSTLIYGFCLAGQLMEAFGLLNEMI---LKNINPNVYTYTILMDALCKEGKVK 237
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + M+ EG P++++YN +M +G++ ++ M + G +P+ ++YNI++
Sbjct: 238 EAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMI 297
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K + A+NLL + P+ + +++L+DG + G + + EM ++G
Sbjct: 298 DRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQP 357
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
DVV YT ++ + L+KA LF M +G PN +TY ++I G C G+ A +
Sbjct: 358 ADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKL 417
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +GC N YN ++S L G L EA + M E G
Sbjct: 418 FQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 126/246 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+N I+ +L+ ++ Y +++QM +G PD+ T NI++ LG++ +L ++
Sbjct: 12 EFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTVLGKI 71
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G+ P+ T N L+ L + +L+ + + GF + + TL++GL + G
Sbjct: 72 LKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGET 131
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + ++ P+VV Y +I + +A DL+ M +G PNV TY+++
Sbjct: 132 RSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTL 191
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I GFC+AG+ EA ++ EM + NPN Y L+ L GK+ EA ++ M ++G
Sbjct: 192 IYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGV 251
Query: 287 YIHLVS 292
++VS
Sbjct: 252 KPNVVS 257
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P I+ +N ++ + ++ L +M G PD T NIL++ + +
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+L + ++G+ P+ + TLM GL G + +F D++ +G D V Y ++
Sbjct: 67 VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
GE A L + + PNV YN++I G C +EA + EM++RG PN +
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
Y+TL+ AG+L EA ++ M+ K
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILK 214
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 97/220 (44%), Gaps = 6/220 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G ++NI+I C V A ++ + N P +Y++++
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHK---NMVPNTVTYSSLIDGFCK 337
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M G D++TY ++ A + LD+ L +M G P+ +T
Sbjct: 338 LGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYT 397
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L KG + A L H+ G +V + ++ GL + G LD +M
Sbjct: 398 YTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
GC+PD V + ++I S + +KA+ L MI K L
Sbjct: 458 ENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAKDLL 497
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G + A KV++ + + P + +Y +++ I Q + E + M +G
Sbjct: 293 CRAGNMRRAAKVLDECVGN---GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVG 349
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ + +N ++ R G +D ++ M + G D +TYN L L + ++ A L
Sbjct: 350 LNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTL 409
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ M E+G P+ + +TTL+ + G++ + F EMA KG P VV Y VMI Y
Sbjct: 410 LHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTK 469
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A+ M KG +P+V+TY S++ G C+ GK D A + +EM+ RG PN +
Sbjct: 470 KGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVA 529
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y L+S L G+ A ++ M++ G
Sbjct: 530 YTALISGLAKEGRSEAAFQLYDDMLKAG 557
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 99/199 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ M G DI TYN + C R+ +LD+ LL M G P++ TY L+ +
Sbjct: 374 IKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHC 433
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A L M E G PSV+ + ++DG ++ G++ + F EM KG +PDV
Sbjct: 434 KDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVY 493
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ + G+++ A LF+ M +G PNV Y ++I G G+ + A + +M
Sbjct: 494 TYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDM 553
Query: 247 ESRGCNPNFLVYNTLVSNL 265
G P+ +Y+ LV +L
Sbjct: 554 LKAGLIPDDSLYSALVGSL 572
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T T+ IL+ + KV F + K N Y A+++A
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V + G P+ TY +++ ++G+++ LL +M G + +N
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + AL + M+++G + + + TL GL R LD K M G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMG 417
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+ V YT +I+ + G++ +A+ LF M KG P+V TYN MI G+ G EA
Sbjct: 418 VVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAE 477
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
KEME +G P+ Y +LV GK+ A ++ M ++G ++V+
Sbjct: 478 RFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVA 529
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 103/205 (50%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L ++V+ + G++D RLLD+M R G S + YN LL + +L
Sbjct: 178 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 237
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G + +V +T L+D LS A ++ + F+EM + DV YT +I +Y AG
Sbjct: 238 MENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGN 297
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A + D + G PN TY +I GFC G+ + A ++ +M+ +G N +++NT
Sbjct: 298 MRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNT 357
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ G + +A ++ M + G
Sbjct: 358 MIDGYCRKGMVDDALKIKAAMEKMG 382
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 3/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P A +C G V AR++++ + + + YN++L + + ++
Sbjct: 177 PLAASVVVDGLCKSGRVDDARRLLDDMPRHGV-SLNAL--CYNSLLDCYVRQKDDGRVQE 233
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M +EG + TY I++ + + + L +EM + D + Y +++
Sbjct: 234 ILEIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYC 293
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A +L+ G +P+ + L++G + G ++A + +M +G + +
Sbjct: 294 RAGNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQI 353
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ MI Y G ++ A + M G +++TYN++ G C + DEA T++ M
Sbjct: 354 IFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIM 413
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G PN++ Y TL+S G + EA + R M EKG +V+
Sbjct: 414 IEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 459
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 85/181 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN + L + + + + M + G P+ +TY ++ + G + + RL EM
Sbjct: 389 TYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREM 448
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P TYN+++ K A M++ GF P V + +L+ G G +
Sbjct: 449 AEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKV 508
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F+EM +G P+VV YT +I+ G E A L+D M+ G +P+ Y+++
Sbjct: 509 DVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSAL 568
Query: 227 I 227
+
Sbjct: 569 V 569
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 35/172 (20%)
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC--------------------- 187
S L + ++DGL ++G +D + D+M G + +C
Sbjct: 176 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 235
Query: 188 --------------YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
YT+++ S A ++ K + LF+ M + +V+ Y ++I +C A
Sbjct: 236 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G A ++ E G PN Y L++ G++ A ++ M +G
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQG 347
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 70/163 (42%), Gaps = 6/163 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+ LI C G++ AR++ + P +YN ++
Sbjct: 413 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEK---GATPSVVTYNVMIDGYTK 469
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E ++M +G+ PD+ TY ++ GK+D +L +EM + G P+
Sbjct: 470 KGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVA 529
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
Y L+ L K + AA L + M + G P ++ L+ L
Sbjct: 530 YTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 572
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 145/277 (52%), Gaps = 6/277 (2%)
Query: 12 TFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ILI G+ G A+ V+ +K+ + +P +YN+++ + + K ++V+
Sbjct: 281 TFSILIDALGKEGKMKAAKIVLAVMMKAYV---KPDVVTYNSLVDGYFLVNEVKHAKYVF 337
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+ G P + +Y I++ + +D+ L +EM P+ T+N L+ L K
Sbjct: 338 NSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKS 397
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +L++ M++ V+ +++L+D L + +LD F +M + PD+ Y
Sbjct: 398 GRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTY 457
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I G L+ AQ++F ++ KG ++ TY MI GFC AG FDEA ++ +ME
Sbjct: 458 TILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMED 517
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + ++ ++ L + +A +++R M+ +G
Sbjct: 518 NGCIPNAITFDIIICALFEKDENDKAEKLLREMIARG 554
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+ T LI C GEV A K + + F+ + SY +++ L
Sbjct: 130 ILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA---LEFQLDRISYGTLINGLCK 186
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + K + + + + PD++ YNI++ + + + + L EM P+ T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ + A+ LLN MK +P V F+ L+D L + G + A K M
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDVV Y ++ Y E++ A+ +F+ M G P V +Y MI G C D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++ +EM+ + PN + +N+L+ L +G++A +++ M ++ + +++
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVIT 421
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 140/313 (44%), Gaps = 46/313 (14%)
Query: 17 ICTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+C GE + L R + ER IK P YN I+ +L + +Y +M+
Sbjct: 184 LCKIGETKAAIQLMRNLEERSIK-------PDVVMYNIIIDSLCKNKLVGEACNLYSEMN 236
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ P+++TY ++ +G L + LL+EM +PD +T++IL+ LGK K
Sbjct: 237 AKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMK 296
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AA +L M + P V+ + +L+DG + KY F+ MA G P V YT+MI
Sbjct: 297 AAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMI 356
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK----------------- 235
+++A LF+ M K +PN T+NS+I G C +G+
Sbjct: 357 DGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQL 416
Query: 236 ------------------FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
D+A + K+M ++ P+ Y L+ L G+L A EV
Sbjct: 417 ADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEV 476
Query: 278 IRHMVEKGKYIHL 290
+H++ KG ++ +
Sbjct: 477 FQHLLIKGYHLDI 489
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 116/241 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N IL +L+ ++++ + + + +G D++T NI++ LG++ +
Sbjct: 67 PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L + + G+ PD T L+ L + AL + + + F + + TL++GL +
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G A + + PDVV Y ++I S + +A +L+ M K PNV T
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I GFC+ G EA ++ EM+ + NP+ ++ L+ L GK+ A V+ M+
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306
Query: 283 E 283
+
Sbjct: 307 K 307
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 101/217 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G +++ I+I + + + + F + K N P ++N+++ L +
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D D++TY+ ++ A + LDQ L +M PD +TY I
Sbjct: 400 IAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTI 459
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L KG + A + H+ G+ + +T ++ G +AG D +M + G
Sbjct: 460 LIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNG 519
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
C+P+ + + ++I + E +KA+ L MI +G L
Sbjct: 520 CIPNAITFDIIICALFEKDENDKAEKLLREMIARGLL 556
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 79/180 (43%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P +N +L L K + A++L H+ G ++ L++ G +
Sbjct: 67 PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+ +G PDV+ T +I GE++KA D ++ + +Y ++I G C
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G+ A +M+ +E R P+ ++YN ++ +L + EA + M K Y ++V+
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246
>gi|58013026|gb|AAW62966.1| chloroplast embryo-defective 1270 [Arabidopsis thaliana]
Length = 1429
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 129/244 (52%), Gaps = 2/244 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N +I G GLA + F++ +L F P +YN++L+A R + ++ VYQQM
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDK 130
G+ D +TYN ++ + G+LD +L +M G SG +PD TY +L+ LGK ++
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ A L++ M +VG P++ ++ L+ G ++AG + + F M G PD + Y+V
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR- 249
M+ + E KA L+ MI+ G P+ Y MI G + D+ +++ME
Sbjct: 514 MLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELC 573
Query: 250 GCNP 253
G NP
Sbjct: 574 GMNP 577
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 1 MIEN-GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+ N G A T+N L+ C V+ F + +P +YNA++
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
E ++ ++ +G+ PD +TYN ++ A R ++ + +M + GF D TYN
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++H+ GK + AL L MK + G +P + +T L+D L +A EM +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G P + Y+ +I Y AG+ E+A+D F M+ G P+ Y+ M+ + +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + ++M S G P++ +Y ++ L + + + IR M E
Sbjct: 527 AWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY-------APDILTYNIVMCA 89
+ N R + + ++ A+LG+ L W + ++ E + + YN +M
Sbjct: 179 EWLNLRHWHSPNARMVAAILGV----LGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV 234
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK--GDKPLAALNLLNHMKEVGFD 147
R GK + L+D M + G PD ++N L++ K G P A+ LL+ ++ G
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + + TL+ SR NLD F++M C PD+ Y MI+ Y G +A+ L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F + KG P+ TYNS++ F ++ + ++M+ G + + YNT++
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 268 AGKLAEAHEVIRHM 281
G+L A ++ + M
Sbjct: 415 QGQLDLALQLYKDM 428
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
RP +YN +L A V++ M PD+ TYN ++ R G +
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
RL E+ GF PD TYN LL+ + + M+++GF + + T++
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 161 SRAGNLDACKYFFDEMAN-KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ G LD + +M G PD + YTV+I S A +A L M+ G P
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ TY+++I G+ AGK +EA M G P+ L Y+ ++ L + +A + R
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 280 HMVEKG 285
M+ G
Sbjct: 533 DMISDG 538
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL--DQFHRLLDE 105
YNA++ ++ + + M G PD++++N ++ A+ + G L + LLD
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ SG PD TYN LL + A+ + M+ P + + ++ R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ F E+ KG PD V Y ++ ++ EK ++++ M G + TYN+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 226 MIRGFCMAGKFDEACTMMKEMES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I + G+ D A + K+M+ G NP+ + Y L+ +L A + EA ++ M++
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 285 G 285
G
Sbjct: 468 G 468
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 46/331 (13%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNF--RPFKNSYNAILHALLGIRQYKLIE 65
+ ++ ++ C G A +VV + ++K F+F P Y I+ A + ++ E
Sbjct: 717 SVCKSMVVVYCKLGFPETAHQVVNQ-AETKGFHFACSPM---YTDIIEAYGKQKLWQKAE 772
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V + G PD+ T+N +M A + G ++ + + M R G SP + NILLH L
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ ++ ++++GF S ++D +RAGN+ K + M G +P +
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTI 892
Query: 186 VCYTVMIT----------SYIAAGELEKAQ-------------------------DLFDG 210
Y +MI + I E+E+A ++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ G P+ TYN++I +C + +E +M++M + G +P Y +L+S
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKC 1012
Query: 271 LAEAHEVIRHMVEKG-----KYIHLVSKFKR 296
L +A ++ ++ KG + H + K R
Sbjct: 1013 LEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T R + ++I C V A +V ++ NF+ +N++L
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA---NFKVELAIWNSMLKMYTA 939
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I YK VYQ++ + G PD TYN ++ R + ++ + L+ +M G P T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ GK A L + G + T+M +G+ + M
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G P + +++ SY ++G ++A+ + + Y+S+I + + ++
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYN 1119
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
+ EM+ G P+ ++ V
Sbjct: 1120 SGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
++G +T+N L+ CG AR + ++ P S N +LHAL
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD---GPSPTVESINILLHALCVDG 836
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + V +++ D G+ + +++ A R G + + ++ M +G+ P Y
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ +L KG + A +++ M+E F + + +++ + + + +
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD Y +I Y E+ L M G P + TY S+I F ++A
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ S+G + Y+T++ R++G ++A ++++ M G
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T + NIL+ C G + VVE + F+ K+S +L A
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL---QDMGFKISKSSILLMLDAFAR 869
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +Y M GY P I Y +++ + ++ ++ EM + F +
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 929
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N +L + + + + +KE G +P + TL+ R + +M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G P + Y +I+++ LE+A+ LF+ +++KG + Y++M++ +G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+A +++ M++ G P + L+ + ++G EA +V+ ++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 124/242 (51%), Gaps = 2/242 (0%)
Query: 46 NSY--NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
N+Y N ++H+ Q+ ++ V +M PD++T+N+++ A++R G ++ L+
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D M G P TYN +L L + + A + M G P V F L+ G RA
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G L+ F+ EM + PDVV ++ +I + GE++ A + M G +P+ Y
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+I GFC AG EA + EM + GC P+ + YNTL++ L +L++A E++ M E
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397
Query: 284 KG 285
+G
Sbjct: 398 RG 399
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 138/280 (49%), Gaps = 6/280 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G R+FN+LI C GE+ A + + ++ P S++ ++ +
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRV---TPDVVSFSCLIGLFTRRGEM 315
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++M + G PD + Y +V+ R G + + R+ DEM G PD TYN L
Sbjct: 316 DHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTL 375
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L+ L K + A LLN MKE G P + FTTL+ G R GN++ FFD ++++
Sbjct: 376 LNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRL 435
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y +I G+L KA +L+D M ++ PN TY+ +I C G+ D A
Sbjct: 436 RPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFA 495
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ EM ++G PN + YN+++ +G +++ + + M
Sbjct: 496 FLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 112/215 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +M G PD++TYN ++ + +L LL+EM G PD T+ L+H
Sbjct: 356 VRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYC 415
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL + + + P ++ + TL+DG+ R G+L +D+M ++ P+ V
Sbjct: 416 RDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHV 475
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+++I S+ G+++ A D M+ KG +PN+ TYNS+I+G+C +G + + +M
Sbjct: 476 TYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKM 535
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + YNTL+ GK+ EA +++ M
Sbjct: 536 RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIM 570
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F P +YN +L+ L R+ E + +M + G PD+ T+ ++ R G +++
Sbjct: 363 FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEK 422
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ D + PD TYN L+ + + A L + M P+ + ++ L+D
Sbjct: 423 ALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G +D F DEM NKG +P+++ Y +I Y +G + K Q M +P
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++ TYN++I G+ GK EA ++K ME+ P+ + YN ++S G + EA V
Sbjct: 543 DLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVY 602
Query: 279 RHMVEKG 285
+ M +G
Sbjct: 603 KKMGARG 609
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 7/279 (2%)
Query: 6 FPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T N+++ G+V A +++ + + +P +YN++L LL ++
Sbjct: 191 FPDVV-THNVMVDARFRAGDVEAAMALIDSMVSKGI---KPGLVTYNSVLKGLLRNGRWD 246
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
V++ M G APD+ ++N+++ R G+L++ R EM +PD +++ L+
Sbjct: 247 KAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLI 306
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ + + A L M+E G P + +T ++ G RAG + DEM GC+
Sbjct: 307 GLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCL 366
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PDVV Y ++ L A++L + M +G P++ T+ ++I G+C G ++A
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + P+ + YNTL+ + G L +A+E+ M
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDM 465
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 127/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N ++ G K E F P S+N ++ +
Sbjct: 220 MVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGE 279
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ Y++M PD+++++ ++ R G++D L EM G PD Y +
Sbjct: 280 LEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTM 339
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + L AL + + M G P V+ + TL++GL + L + +EM +G
Sbjct: 340 VIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERG 399
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ +T +I Y G +EKA FD + + P++ TYN++I G C G +A
Sbjct: 400 VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKAN 459
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M SR PN + Y+ L+ + G++ A + MV KG
Sbjct: 460 ELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKG 504
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 114/218 (52%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +SD+ PDI+TYN ++ R G L + + L D+M P+ TY+IL+ +
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCE 486
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A L+ M G P+++ + +++ G R+GN+ + F +M + MPD++
Sbjct: 487 KGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLIT 546
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I Y+ G++ +A +L M + P+ TYN +I GF + G EA + K+M
Sbjct: 547 YNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMG 606
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+RG P+ Y ++++ AG ++ ++ M++KG
Sbjct: 607 ARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 108/254 (42%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G P TF LI G K ++ F RP +YN ++ +
Sbjct: 395 MKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGD 454
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M P+ +TY+I++ + G++D LDEM G P+ TYN
Sbjct: 455 LGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNS 514
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + L M+ P ++ + TL+ G + G + M N+
Sbjct: 515 IIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENEN 574
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V Y ++I+ + G +++A ++ M +G P+ +TY SMI G +AG ++
Sbjct: 575 VQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSF 634
Query: 241 TMMKEMESRGCNPN 254
+ EM +G P+
Sbjct: 635 QLHDEMLQKGLAPD 648
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+ T RT+ +LI G + + F + K P ++Y ++ L +
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +MS++G P ++TYN ++ + G +D +LD M + P+ TYN
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A+ LLN M E PS++ + +L+ G + +L++ M G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD Y+V I + G +E+A LFD + KG N Y ++I G+C GK D A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++ M + C PN YN L+ L K+ EA ++ M+ G
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ N TFN ++ C G V A + +++ L P +Y +++ LG
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGL---HPDTFTYTSLI---LG 238
Query: 58 IRQYKLIEWVYQQ---MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ K ++ Y+ M +G + ++Y ++ G++++ +L +M P
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TY +L++ L + + ALNL N MKE G +P+V +T L+DGL + +D +
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM+ KG +P VV Y +I Y G ++ A ++ D M + PN TYN +I G C
Sbjct: 359 EMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K +A ++ +M R +P+ + YN+L+ L A+ ++ M E G
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ +LI C ++ ARK++ + L P +YNA++ G
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI---PSVVTYNALID---G 378
Query: 58 IRQYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +I+ ++ M P+ TYN ++C + K+ + LL++M SP
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN L+H K + +A LL+ M E G P ++ +D L + G ++ FD
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+ KG + V YT +I Y G+++ A L + M+ LPN +TYN +I G C
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K EA +++ +M + G P + Y L+ + G A +V HMV G
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C+ +V +V + F F+P YN IL +L ++ VY ++ + +
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN--ILLHVLGKGDKPLAAL 135
P+I T+N ++ ++G + + ++ ++G PD TY IL H KG +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L+ M + G + + +T L+ GL AG ++ F +M C P V YTV+I +
Sbjct: 252 FLI--MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G +A +LF+ M KG PNV TY +I G C K DEA M+ EM +G P+
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ YN L+ G + +A E++ M
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLM 395
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 133/282 (47%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E F T R +N ++ + + L ++ +++ P ++NA+++ I
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E ++ G PD TY ++ R +D + + M + G + +Y L+
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H L + + AL L M E P+V +T L+ LS +G F+EM KGC
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCE 331
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+V YTV+I ++++A+ + M KG +P+V TYN++I G+C G D+A +
Sbjct: 332 PNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEI 391
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ MES C PN YN L+ L K+ +A ++ M+E+
Sbjct: 392 LDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G + T+N LI + G+ E + + P +YN ++ L R+
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + +P ++TYN ++ + ++ L+ +RLL M +G PD TY++
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L K + A L + +K G + + +T L+DG + G +D + M N
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P+ Y V+I ++++A L M+T G P V TY +I G FD A
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M S G P+ Y + + G L E +VI M E+G LV+
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 41/316 (12%)
Query: 1 MIENGFPTTARTFNILIC-TCGE--VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N RT+N LIC C + V A ++ + ++ KL P +YN+++H
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL---SPSLITYNSLIHGQCK 451
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNI---VMCAKYRL--------------------- 93
+ + + M++ G PD TY++ +C + R+
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 94 -----------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GK+D + LL+ M P+ +TYN+L+ L K K A +L+ M
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+G P+V+ +T L+ + + G D F+ M + G PDV YT + +Y + G LE
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ D+ M +G LP++ TY +I G+ G A +K M GC P+ + + L+
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 263 SNLRNAGKLAEAHEVI 278
NL + ++ E I
Sbjct: 692 KNLSHENRMKETRSEI 707
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SY ++H L + ++ M+++ P + TY +++ A G+ + L +EM
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ HTY +L+ L K +K A +L+ M E G PSV+ + L+DG + G +
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D D M + C P+ Y +I ++ KA L + M+ + P++ TYNS+
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G C + A ++ M G P+ Y+ + L G++ EA + + KG
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 125/286 (43%), Gaps = 21/286 (7%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ +A ++ER + P +YN ++ L ++ K + +M G
Sbjct: 520 CKVGKIDVAYSLLERMLNDACL---PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++TY I++ + G D ++ + M G+ PD TY LH ++
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT---- 193
+ M E G P ++ +T L+DG +R G F M + GC P + +++I
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696
Query: 194 --------------SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
S E E A LF+ M+ G +V Y ++I GFC + +EA
Sbjct: 697 ENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 756
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ M+ RG +P+ +YN+L+ G AEA ++ MVE G
Sbjct: 757 QGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 802
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 67 VYQQMSDEG---YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V+++M+ +G + P + YN ++ + + +D+ + E+ + SP+ +T+N +++
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K + A + + + G P +T+L+ G R +D F M KGC
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ V YT +I AG + +A LF M P V TY +I +G+ EA +
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ +GC PN Y L+ L K+ EA +++ M EKG
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 76/166 (45%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L ++M G + D Y L+ + ++ A L++HMKE G PS + +L+D
Sbjct: 723 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 782
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G D M G +P + Y +++ G EKA+ +F G+++ G +
Sbjct: 783 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 842
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+ +I G DE ++ ME +GC PN L Y+ L+ L
Sbjct: 843 VAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLE 888
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 108 RSGFSPDFHTYNILLHVL------GKGDK-----------------PLAALNLLNHMKEV 144
R GF + H+Y+ +L++L G +K L +N E
Sbjct: 94 RPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEF 153
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
F P++ + T++ LS+ +D K + E+ N P++ + M+ Y G + +A
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ ++ G P+ FTY S+I G C D A + M +GC N + Y L+
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 265 LRNAGKLAEAHEVIRHMVE 283
L AG++ EA ++ M E
Sbjct: 274 LCEAGRINEALKLFADMTE 292
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 79/171 (46%)
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+Y++ ++++M + G D+ Y ++ + +L++ L+ M G SP YN
Sbjct: 717 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYN 776
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL K A+ L++ M E G P + + L+ GL G+ + K F + +
Sbjct: 777 SLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSC 836
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
G D V + V+I + +++ +L D M KG PN TY+ +I G
Sbjct: 837 GYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 6/148 (4%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y A++ + + + + M + G +P YN ++ +LG + RL+D M
Sbjct: 740 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 799
Query: 108 RSGFSPDFHTYNIL---LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+G P +Y +L L++ G +K A + + + G++ + + L+DGL +
Sbjct: 800 ENGLLPLLESYKLLVCGLYIEGSNEKAKA---VFHGLLSCGYNYDEVAWKVLIDGLLKRD 856
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMI 192
+D C D M KGC P+ + Y+++I
Sbjct: 857 LVDECSELIDIMEEKGCQPNPLTYSLLI 884
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 72/166 (43%), Gaps = 6/166 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G + LI C + A+ +V K P ++ YN++L
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM---KERGMSPSEDIYNSLLDCCCK 784
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Y + M + G P + +Y +++C Y G ++ + + G++ D
Sbjct: 785 LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVA 844
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+ +L+ L K D L++ M+E G P+ L ++ L++GL R
Sbjct: 845 WKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLERT 890
>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 999
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 141/279 (50%), Gaps = 8/279 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+++LI C ++ A +V+++ I++ + +P Y ++ A + +Y++ +
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGV---KPNVFMYGTLIKAYVQESRYEMAIELL 509
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PD+ YN ++ R K+++ LL +MG G P+ HTY +++ K
Sbjct: 510 KIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKS 569
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A M G P+ + +T L+ G GN F M KG +PD+ Y
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I S G+ ++A +F + G +P+VF YNS+I GFC G ++A + EM
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689
Query: 249 RGCNPNFLVYNTLVSNLR--NAGKLAEAHEVIRHMVEKG 285
G NPN +VYNTL+++ +G L EA ++ M+ KG
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG 728
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 6/285 (2%)
Query: 3 ENGFPTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
E FPT N++ + +GL KV +++K+ P +Y ++ A +
Sbjct: 201 EGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIV---PDVYTYTNVIKAHCKVGD 257
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V +M E P++ TYN + + G +D+ + M G PD HTY +
Sbjct: 258 VIKGKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTL 316
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + A + M G +P+ +T L+DG + GN++ DEM +G
Sbjct: 317 LVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG 376
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+VV Y MI AGE+ KA LF+ M+ G P+ +TYN +I G+ + +AC
Sbjct: 377 LKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKAC 436
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM++R P+ Y+ L+S L ++ L +A+EV+ M+ G
Sbjct: 437 ELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNG 481
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+ +L+ C A+ + E S L P + +Y A++ +
Sbjct: 302 MMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGL---NPNRFTYTALIDGFIK 358
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G +++TYN ++ + G++ + L +EM +G PD T
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWT 418
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+ K A LL MK PS ++ L+ GL + +L D+M
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V Y +I +Y+ E A +L MI G LP++F YN +I G C A K +
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ +M +G PN Y ++ +G++ A + M+ G
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N I C G V A +V + ++ L P ++Y ++ ++ K + ++
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGL---GPDGHTYTLLVDGFCKQKRSKEAKLIF 334
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G P+ TY ++ + G +++ R+ DEM G + TYN ++ + K
Sbjct: 335 ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKA 394
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A++L N M G +P + L+DG ++ ++ EM + P Y
Sbjct: 395 GEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTY 454
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+V+I+ + +L+KA ++ D MI G PNVF Y ++I+ + +++ A ++K M +
Sbjct: 455 SVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA 514
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ YN L+ L A K+ EA ++ M EKG
Sbjct: 515 NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 140/289 (48%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G R ++ +I + + G ++ + F+K P YN+++
Sbjct: 617 MLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGD 676
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMC--AKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ +Y +M G P+I+ YN ++ + G L + +L DEM G SPD + Y
Sbjct: 677 IEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIY 736
Query: 119 NILLHVLGKGDKPLAALNLLN--HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
IL+ GK AL+L + K VG S+ F +L+D + G + + FD+M
Sbjct: 737 CILIDGCGKEGNLEKALSLFHEAQQKSVG---SLSAFNSLIDSFCKHGKVIEARELFDDM 793
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+K P++V YT++I +Y A +E+A+ LF M T+ +PN TY S++ + G
Sbjct: 794 VDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNR 853
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ K+ME+RG + + Y + S GK EA +++ + +G
Sbjct: 854 FKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEG 902
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N+LI + K E + K P +Y+ ++ L
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V QM G P++ Y ++ A + + + LL M +G PD YN
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + K A LL M E G P+ + ++ S++G + + +F +M + G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+ V YT++I + G +A F M+ KG +P++ Y+++I GK EA
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + G P+ +YN+L+S G + +A ++ M+ G
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNG 691
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 2/213 (0%)
Query: 81 LTYNIVMCAKYR-LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
LT + K+R LG L++ + GF P N L+ L K + +
Sbjct: 172 LTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYG 231
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M E P V +T ++ + G++ K EM K C P++ Y I G
Sbjct: 232 SMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTG 290
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+++A ++ M+ KG P+ TY ++ GFC + EA + + M S G NPN Y
Sbjct: 291 AVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYT 350
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L+ G + EA + M+ +G +++V+
Sbjct: 351 ALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK+ + L D+M +P+ TY IL+ GK + A L M+ P+ L +
Sbjct: 781 GKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTY 840
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
T+L+ ++ GN F +M +G D + Y VM ++Y G+ +A L + +
Sbjct: 841 TSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLV 900
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G ++++I C + ++ EM + + NTL+ +G E
Sbjct: 901 EGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDE 960
Query: 274 AHEVIRHMVEKG 285
A +V+ M G
Sbjct: 961 ASKVLGVMQRLG 972
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 6/208 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-R 59
M++ T+ ILI G+ + + + F+ + N P +Y ++L + I
Sbjct: 793 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 852
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++K+I +++ M G A D + Y ++ A + GK + +LL++ G + ++
Sbjct: 853 RFKMIS-LFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 911
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K + L LL+ M + S TL+ G ++GN D M
Sbjct: 912 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 971
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDL 207
G +P ++ +T I+ G + D+
Sbjct: 972 GWVPT----SLSLTDSISTGRDDMKSDI 995
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 142 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAML 201
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 202 ASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 261
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 262 FAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 321
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 322 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREMLSVGLK 381
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 382 PDTGTYTMIINEF 394
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 130 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 186
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 187 LGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 246
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 247 FTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 306
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 307 MKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSV 366
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 367 DAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVT 421
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 16/307 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G + TFN +I C G V A+ I S +F + + N++ L
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAK-----LIMSHIFRYDAYPNAFTYTSLILGH 247
Query: 58 IRQYKL--IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R + L ++ +M +G P+ +TY+ ++ G+L++ +L+EM + G P
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+TY I L L A+ LL MK+ G P++ FT L+ GLSR G + + +
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +P V Y +I G E A +F M++ G LP+ TYN +I+ FC+ G
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLV------SNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+A + +M G +PN + YNTL+ NL NA +L E + + Y
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 290 LVSKFKR 296
L+S F R
Sbjct: 488 LISGFSR 494
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--L 55
M+ +G T T+N LI C G A + + + P +YN I+ L
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL---PSTQTYNEIIKCFCL 424
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+G Q ++ ++ +M G +P+++TYN ++ + G L+ RLL+ M +G PD
Sbjct: 425 MGDIQKAMV--IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ +G K A +L M E G P+ + +T ++DG +D F +
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +P Y VMI+ + + +A++ M+ +G LPNV TY S I G C G+
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A + EME R PN Y++L+ L G+ +A
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 1/287 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G +TF LI G + + K P +YNA+++ L +
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +++ M G P TYN ++ +G + + + D+M ++G SP+ TYN
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K A+ LL MK G P +T L+ G SR G L+ F M G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V YT +I Y +++ A LF M+ G LP+ TYN MI GF EA
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+M +G PN + Y + + L G+ A ++ H +EK Y
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF-HEMEKRNY 618
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 92 RLGKLDQFHRLLD---EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+LGK D D +M SG P T+N ++++L K + A +++H+ P
Sbjct: 176 QLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP 235
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ +T+L+ G R NLD FD M GC P+ V Y+ +I + G LE+A D+
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M+ KG P V+TY + C AG EA ++ +M+ RGC PN + L+S L
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 269 GKLAEAHEVIRHMVEKG 285
GK A + M+ G
Sbjct: 356 GKFEIAIGLYHKMLADG 372
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 15 ILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
++I +C G ++V + I SK ++F S+ +L L L +Y +M
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSK-YDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKML 194
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ G P +LT+N ++ + G++ + ++ + R P+ TY L+ +
Sbjct: 195 NSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLD 254
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A + + M + G DP+ + ++TL++GL G L+ +EM KG P V YT+ +
Sbjct: 255 LAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL 314
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
S AG +A +L M +G +PN+ T+ ++I G GKF+ A + +M + G
Sbjct: 315 VSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
P + YN L++ L G+ A + + M+ G
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G + T++ LI C+ G + A ++E ++ + P +Y L +L
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI---EPTVYTYTIPLVSLCD 319
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M G P+I T+ ++ R GK + L +M G P T
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ L + A + M G PS + ++ G++ FD+M
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V+ Y +I Y G L A L + M G P+ +TY +I GF GK +
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ M G +PN + Y ++ N K+ +A + MVE G
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 8/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N LI C G + A +++E + L +P +Y ++
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL---KPDAWTYTELISGFSR 494
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ M + G +P+ +TY ++ + L K+D L +M SG P T
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+++ K + A N M + G P+V+ +T+ +DGL R G F EM
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQ--DLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ P++ Y+ +I G E A+ +L + G PNV TY ++++G C G+
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
EA ++ M+ +G P+ +Y L+ K+ A + M G +HL
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 110/272 (40%), Gaps = 2/272 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G T+ +I + + F K P +YN ++
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E +M +G P+++TY + R G+ ++ EM + + P+ +TY+
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627
Query: 121 LLHVLGKGDKPLAA--LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L++ L + + A NLL + G +P+V +TTL+ GL G M
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG P Y ++ ++E A ++F M T G ++ Y ++I C +E
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
A + + M + N + + + L+ L G+
Sbjct: 748 AQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGE 779
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 8/270 (2%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G +++T+N++I + A + +K L P +Y + + L
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL---PNVITYTSFIDGLCR 599
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD--QFHRLLDEMGRSGFSPDF 115
+ L ++ +M Y P++ TY+ ++ + G+ + + + LL + G P+
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV 659
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L + A L+ M++ G PS + L+ G + +++ F
Sbjct: 660 DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYS 719
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G + Y +I + +E+AQ +F M+ K + + ++ G G+
Sbjct: 720 MDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGE 779
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D ++ MESR C NF Y L L
Sbjct: 780 TDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 119/223 (53%), Gaps = 8/223 (3%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLD----QFHRLLDEMGRSGFSPDFHTYNILL 122
++ +M +G PD +TY IVM A +GK+D QF RL+ E G +PD + L+
Sbjct: 400 LFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISE----GLTPDAVVFRNLI 455
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H L DK A L M G P+ + F TL++ L + G + K FD M
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQ 515
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
DV+ Y +I Y G++++A L +GM+ G PN TYN+MI G+C G+ ++A ++
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSL 575
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++M S+G NP + Y+T++ L A + A A E+ M++ G
Sbjct: 576 FRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSG 618
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG T N L+ C+ G+ A V +R + + P +YN ++ L
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGV---EPDVFTYNTLMGYLCK 320
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M G+ P+ TY ++ G L + H LLD M R+G PD +
Sbjct: 321 NGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYI 380
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ K K A+ L + M+ G +P + + +MD L G +D F +
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN------------------ 219
++G PD V + +I A + +KA++L MI +G PN
Sbjct: 441 SEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVA 500
Query: 220 -----------------VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
V TYN++I G+C+ GK DEA +++ M G PN + YNT++
Sbjct: 501 RAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMI 560
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ G++ +A + R M KG
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKG 583
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 120/246 (48%), Gaps = 1/246 (0%)
Query: 41 FRPFKNSYNAILHALLGI-RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+ P SYN +++ LL RQ ++ QM D+G +PD++TYN ++ A + +D+
Sbjct: 198 YPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKA 257
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L M ++G P+ T+N LLH KP A+ + M G +P V + TLM
Sbjct: 258 AVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGY 317
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G + FD M +G P+ Y ++ Y G L K L D M+ G P+
Sbjct: 318 LCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPD 377
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ +N +I + GK D+A + +M +G NP+ + Y ++ L GK+ +A
Sbjct: 378 HYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFG 437
Query: 280 HMVEKG 285
++ +G
Sbjct: 438 RLISEG 443
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 128/287 (44%), Gaps = 11/287 (3%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN------FRPFKNSYNAILHALLGI 58
G+P ++N +I GL R+ + LF+ P +YN+I+ AL
Sbjct: 197 GYPPDVVSYNTVIN-----GLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKA 251
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R V +M G P+ +T+N ++ GK + + M R G PD TY
Sbjct: 252 RAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTY 311
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L K + + A + + M + G P+ + TL+ G + G+L + D M
Sbjct: 312 NTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVR 371
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PD + ++I +Y G+++ A LF M +G P+ TY ++ CM GK D+
Sbjct: 372 NGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDD 431
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + S G P+ +V+ L+ L K +A E+ M+ +G
Sbjct: 432 AMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG 478
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 42/250 (16%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS------------------------- 112
P+++TY++V+ R+G LD L + RSG++
Sbjct: 89 PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148
Query: 113 -----------PDFHTYNILLHVLGKGDKPLAALNLLNHM-----KEVGFDPSVLHFTTL 156
P+ +Y ILL L ++ AL+LL+ M G+ P V+ + T+
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208
Query: 157 MDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++GL R G LD + FD+M ++G PDVV Y +I++ A ++KA + M+ G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+PN T+NS++ G+C +GK ++A + K M G P+ YNTL+ L G+ EA
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328
Query: 276 EVIRHMVEKG 285
++ MV++G
Sbjct: 329 KIFDSMVKRG 338
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNILI T + G + F K + P +Y ++ AL + +
Sbjct: 369 MVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGK 428
Query: 61 YKLIEWVYQQMSDEGYAPDILTY-NIV--MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ EG PD + + N++ +CA+ K D+ L EM G P+
Sbjct: 429 VDDAMAQFGRLISEGLTPDAVVFRNLIHGLCAR---DKWDKAEELAVEMIGRGICPNNIF 485
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL+ L K A N+ + M V V+ + TL+DG G +D + M
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMV 545
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+ V Y MI Y G +E A LF M +KG P + TY+++++G A +
Sbjct: 546 LDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTA 605
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
A + M G + YN ++ L
Sbjct: 606 AAKELYLWMIKSGIKFDIGTYNIILLGL 633
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D++TYN ++ GK+D+ +LL+ M G P+ TYN +++ K + A +L
Sbjct: 517 DVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------------------ 180
M G +P ++ ++T++ GL +A A K + M G
Sbjct: 577 RQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQN 636
Query: 181 -CMPDVV----------------CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
C D + + +MI + + G ++A+DLF ++ +G +PNV TY
Sbjct: 637 NCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
M++ G +E + +E GC N + N LV L G++ +A
Sbjct: 697 WLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 123/310 (39%), Gaps = 47/310 (15%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ I+ +C G+V A R I L P + ++H L
Sbjct: 404 MRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGL---TPDAVVFRNLIHGLCA 460
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E + +M G P+ + +N ++ + G + + + D M R D T
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520
Query: 118 YNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
YN L+ + GK D+ A LL M G P+ + + T+++G + G ++ F
Sbjct: 521 YNTLIDGYCLHGKVDE---AAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM-- 232
+MA+KG P +V Y+ ++ A A++L+ MI G ++ TYN ++ G C
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637
Query: 233 ---------------------------------AGKFDEACTMMKEMESRGCNPNFLVYN 259
G+ DEA + + +RG PN + Y
Sbjct: 638 CTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 697
Query: 260 TLVSNLRNAG 269
++ +L G
Sbjct: 698 LMMKSLIEQG 707
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 114/239 (47%), Gaps = 6/239 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G+V A K++E + L +P + +YN +++ + + ++
Sbjct: 520 TYNTLIDGYCLHGKVDEAAKLLEGMV---LDGVKPNEVTYNTMINGYCKNGRIEDAFSLF 576
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+QM+ +G P I+TY+ ++ ++ + L M +SG D TYNI+L L +
Sbjct: 577 RQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQN 636
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL + ++ + F F ++D L + G D K F + +G +P+VV Y
Sbjct: 637 NCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTY 696
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+M+ S I G LE+ DLF + G N N+++ G+ +A + +++
Sbjct: 697 WLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKID 755
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 38/317 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIRQYKL 63
G+ + +N ++ + L RF S L + P +YN ++ AL G K
Sbjct: 111 GYVPSVLAYNAVLLALSDASLTS--ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKE 168
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + M G P+++TYN ++ A +R G++D RL+ M G P+ T+N +++
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ K K A + + M G P + + TL+ G +AG F EM KG MP
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288
Query: 184 DVVCYTVMITSYIAAGELEKA-------------------QDLFDGMITKGQL------- 217
DVV +T +I AG LE A L DG KG L
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAV 348
Query: 218 ---------PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
P+V YN++I G+CM G+ DEA ++ EME++G P+ + Y+T++S
Sbjct: 349 RGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKN 408
Query: 269 GKLAEAHEVIRHMVEKG 285
A E+ + M+EKG
Sbjct: 409 CDTHSAFELNQQMLEKG 425
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 120/219 (54%), Gaps = 3/219 (1%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL-GKGDKPLA 133
GY P +L YN V+ A L R D M G +P+ +TYNIL+ L G+G +
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRK-E 168
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL++L M+ G P+V+ + TL+ RAG +D + M + G P++V + M+
Sbjct: 169 ALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
AG++E A+ +FD M+ +G P+ +YN+++ G+C AG EA ++ EM +G P
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + + +L+ + AG L A ++R M E+G ++ V+
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVT 327
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 41/319 (12%)
Query: 12 TFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L+ GEV A ++V + L +P ++N++++ + + + V+
Sbjct: 187 TYNTLVAAFFRAGEVDGAERLVGMMLDGGL---KPNLVTFNSMVNGMCKAGKMEDARKVF 243
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M EG APD ++YN ++ + G + + EM + G PD T+ L+HV+ K
Sbjct: 244 DEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKA 303
Query: 129 DKPLAALNLLNHMKEVGFD-----------------------------------PSVLHF 153
A+ L+ M+E G PSV+ +
Sbjct: 304 GNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCY 363
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L++G G +D + EM KG PDVV Y+ +I++Y + A +L M+
Sbjct: 364 NALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLE 423
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG LP+ TY+S+IR C + +A + K M G P+ Y +L+ G +
Sbjct: 424 KGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVER 483
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A + MV+ G +V+
Sbjct: 484 ALSLHDKMVKAGVLPDVVT 502
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 21/303 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G TF LI C G + A V + ++ +P YNA+++
Sbjct: 316 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRI---KPSVVCYNALINGYCM 372
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M +G PD++TY+ ++ A + L +M G PD T
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 432
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ VL + + A L +M ++G P +T+L+DG + GN++ D+M
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM----------- 226
G +PDVV Y+V+I + +AQ L + + +P Y+++
Sbjct: 493 KAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKS 552
Query: 227 ----IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++GFCM G +EA + + M R N + VY+ L+ AG + +A + M+
Sbjct: 553 VLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQML 612
Query: 283 EKG 285
++G
Sbjct: 613 QRG 615
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 94/237 (39%), Gaps = 21/237 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ LI C G V A + ++ +K+ + P +Y+ +++ L
Sbjct: 456 MIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVL---PDVVTYSVLINGLSK 512
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--CAKYRL-------------GKLDQFHRL 102
+ + + ++ E P Y+ +M C K L G +++ ++
Sbjct: 513 SARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKV 572
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
M ++ D Y++L+H + + AL+ M + GF P+ +L+ GL
Sbjct: 573 YQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFE 632
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
G + ++ N + D +I + G ++ D+ GM G LP+
Sbjct: 633 NGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 49/341 (14%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+NILI C C + LA ++ + +K + P + N++L+ +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMK---LGYEPDIVTLNSLLNGFCHGNRI 164
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ QM + GY PD +T+ ++ + K + L+D M + G PD TY +
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 122 LHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K GD LA LNLLN M+ + +V+ ++T++D L + + D F EM NKG
Sbjct: 225 VNGLCKRGDTDLA-LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
P+V+ Y+ +I+ +++ G+L KA+
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L++ MI + PN+FTY+S+I GFCM + EA M++ M + C PN + YNTL++
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 266 RNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKRC 300
A ++ + E+ R M ++G Y L+ F + + C
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 136/284 (47%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ ++ C G+ LA ++ + +K+ Y+ ++ +L
Sbjct: 209 MVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI---EANVVIYSTVIDSLCK 265
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ +M ++G P+++TY+ ++ G+ RLL +M +P+ T
Sbjct: 266 YRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVT 325
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K K + A L M + DP++ +++L++G L K + M
Sbjct: 326 FSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMI 385
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K C+P+VV Y +I + A ++K +LF M +G + N TY ++I GF A D
Sbjct: 386 RKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 445
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G +PN L YN L+ L GKLA+A V ++
Sbjct: 446 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 131/253 (51%), Gaps = 2/253 (0%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RPF + ++ +L A+ + ++ L+ ++M G + ++ TYNI++ R +L
Sbjct: 73 RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLA 132
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL +M + G+ PD T N LL+ G++ A+ L++ M E+G+ P + FTTL+ G
Sbjct: 133 LALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG 192
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L D M +GC PD+V Y ++ G+ + A +L + M N
Sbjct: 193 LFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEAN 252
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V Y+++I C D+A + EME++G PN + Y++L+S L N G+ ++A ++
Sbjct: 253 VVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLS 312
Query: 280 HMVEKGKYIHLVS 292
M+E+ +LV+
Sbjct: 313 DMIERKINPNLVT 325
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 135/299 (45%), Gaps = 14/299 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TF LI V L ++V+R + L +Y A+++
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLV-------TYGAVVN 226
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + +M +++ Y+ V+ + + D L EM G P
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+ L+ L + A LL+ M E +P+++ F+ L+D + G L + +
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+EM + P++ Y+ +I + L +A+ + + MI K LPNV TYN++I GFC A
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKA 406
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ D+ + +EM RG N + Y TL+ A A V + MV G + ++++
Sbjct: 407 KRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 116/229 (50%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +Y++++ L ++ + M + P+++T++ ++ A + GKL + +
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L +EM + P+ TY+ L++ D+ A +L M P+V+ + TL++G
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFC 404
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A +D F EM+ +G + + V YT +I + A + + AQ +F M++ G PN+
Sbjct: 405 KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 464
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
TYN ++ G C GK +A + + ++ P+ YN ++ + AGK
Sbjct: 465 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 114/222 (51%), Gaps = 7/222 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI--EWVYQQMSDE 74
+C G A +++ I+ K+ P +++A++ A +++ KL+ E +Y++M
Sbjct: 298 LCNYGRWSDASRLLSDMIERKI---NPNLVTFSALIDAF--VKKGKLVKAEKLYEEMIKR 352
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
P+I TY+ ++ L +L + ++L+ M R P+ TYN L++ K +
Sbjct: 353 SIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKG 412
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ L M + G + + +TTL+ G +A + D + F +M + G P+++ Y +++
Sbjct: 413 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 472
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G+L KA +F+ + P+++TYN MI G C AGK+
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKW 514
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 76/159 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ L M + PS++ F+ L+ +++ D F ++M G ++ Y ++I
Sbjct: 62 AIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILIN 121
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ L A L M+ G P++ T NS++ GFC + +A ++ +M G P
Sbjct: 122 CFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKP 181
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + + TL+ L K +EA +I MV++G LV+
Sbjct: 182 DTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVT 220
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+LD L M +S P ++ LL + K +K ++ M+ +G ++ +
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L++ R L +M G PD+V ++ + + A L D M+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+ T+ ++I G + K EA ++ M RGC P+ + Y +V+ L G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 275 HEVIRHM 281
++ M
Sbjct: 238 LNLLNKM 244
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L GLS LD F MA P ++ ++ ++++ + + + M
Sbjct: 49 VLRTGLSDI-ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEIL 107
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G N++TYN +I FC + A ++ +M G P+ + N+L++ + ++++A
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 167
Query: 275 HEVIRHMVEKG 285
++ MVE G
Sbjct: 168 VALVDQMVEMG 178
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 159/389 (40%), Gaps = 104/389 (26%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+C C ++G ++++ I + P + +N+++HA Y +
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCY---PSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYRL-------------------------------- 93
++M D G P + YNI++ C +L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 94 ------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
GK ++ + ++ EM GF PD TY+ ++ +L K A L MK
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P V +T L+D + G L + +FDEM GC P+VV YT +I +Y+ A ++ A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM--------------------- 246
F+ M+++G +PNV TY ++I G C +G+ ++AC + M
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 247 ---------------------ESR---------GCNPNFLVYNTLVSNLRNAGKLAEAHE 276
E+R GC PN +VY+ L+ GKL EA
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 277 VIRHMVEKG------KYIHLVSKFKRYKR 299
V M E+G Y L+ + + KR
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 16/290 (5%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ ILI + +VGL ++ + F + P +Y A++HA L R+ +++ M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH--------------- 116
EG P+++TY ++ + G++++ ++ M + PD
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636
Query: 117 -TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L K K A +LL+ M G +P+ + + L+DG + G LD + F +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ +G P+V Y+ +I L+ A + M+ PNV Y MI G C GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
DEA +M ME +GC+PN + Y ++ AGK+ + E++R M KG
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 16/263 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKV------------VERFIKSKLFNFR-PF 44
M+ G T+ LI C G++ A ++ V+ + K N R P
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A++ L + K + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M G+ P+ +TY+ L+ L K + AL +L+ M E P+V+ +T ++DGL + G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D M KGC P+VV YT MI + AG+++K +L M KG PN TY
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 225 SMIRGFCMAGKFDEACTMMKEME 247
+I C AG D+A ++ EM+
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMK 838
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P LTYN ++ +LD + + EM SGF+ D +T +H+L K
Sbjct: 222 RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG 281
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AL L+ +E D + +T ++ GL A + F M + C+P+VV Y
Sbjct: 282 RWREALALIEK-EEFKLDTVI--YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + +L + + + MIT+G P+ +NS+I +C +G + A ++K+M
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 250 GCNPNFLVYNTLVSNLRNAGKL 271
GC P ++VYN L+ + KL
Sbjct: 399 GCQPGYVVYNILIGGICGNEKL 420
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 135/305 (44%), Gaps = 13/305 (4%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G+ T++ LI + LA KV+ R +++ + P Y ++ L
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN---SCAPNVIIYTEMIDGLCK 753
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M ++G P+++TY ++ + GK+D+ L+ +MG G +P+F T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L++ A LL+ MK+ + + + +++G +R + DE+A
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL--GLLDEIA 871
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM--ITKGQLPNVFTYNSMIRGFCMAGK 235
+P + Y ++I S+ AG LE A +L M T + Y+S+I +A K
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASK 931
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA---HEVIRHMVEKGKYIHLVS 292
D+A + +M RG P ++ LV L + EA + I MV L+
Sbjct: 932 VDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCICQMVHVSNSSSLIL 991
Query: 293 KFKRY 297
K Y
Sbjct: 992 KHAIY 996
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L +K++G+ PS L + L+ A LD EM++ G D +
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVH 275
Query: 194 SYIAAGELEKAQDLFDGMITKGQLP-NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
AG +A +I K + + Y MI G C A F+EA + M S C
Sbjct: 276 LLCKAGRWREAL----ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI 331
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
PN + Y L+ +L ++ M+ +G Y
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY 366
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 158/368 (42%), Gaps = 75/368 (20%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--- 54
MI G + FN L+ C + A K++++ K + +P YN ++ +
Sbjct: 369 MIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCEC---KPGYVVYNILIGSICS 425
Query: 55 ---LLGIRQYKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
L G ++L E Y +M G +++++ +C GK ++ ++++ EM
Sbjct: 426 GGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCG---FGKFEKAYKVIHEMMG 482
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+GF PD TY+ ++ L + A L MK G P V +T L+D S+AG +
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ DEM GC P VV YT +I +Y+ A ++ A +LF+ MI KG PNV TY ++I
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602
Query: 229 GFCMAGKFDEACT----------------------------------------------- 241
G+C +G ++AC
Sbjct: 603 GYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662
Query: 242 ----MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+++ M GC PN +VY+ L+ A KL EA EV MVE G Y L+
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLI 722
Query: 292 SKFKRYKR 299
+ + KR
Sbjct: 723 DRLFKDKR 730
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%), Gaps = 5/266 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C +V AR ++E P Y+A++ + + V+ +M + GY
Sbjct: 655 LCKAHKVKDARDLLETMFVD---GCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P++ TY+ ++ ++ +LD ++L +M + +P+ Y ++ L K K A
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYK 771
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L+ M+E G P+V+ +T ++DG +AG +D C F EM +KGC P+ V YTV+I
Sbjct: 772 LMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCC 831
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A G L++A L + M +V +Y +I G+ +F + +++E+E G P L
Sbjct: 832 ATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKNGSAPIIL 889
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMV 282
+Y L+ N AG+L A E+ + ++
Sbjct: 890 LYKVLIDNFVKAGRLEVALELHKEVI 915
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 141/321 (43%), Gaps = 28/321 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T T+ LI +V +A ++ E I F P +Y A++
Sbjct: 550 MVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF---PNVITYTALIDGYCK 606
Query: 58 IRQYKLIEWVYQQMSDEGYAPDI----------------LTYNIVMCAKYRLGKLDQFHR 101
+ +Y +M + PD+ +TY ++ + K+
Sbjct: 607 SGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARD 666
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL+ M G P+ Y+ L+ K K A + + M E G++P+V +++L+D L
Sbjct: 667 LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLF 726
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ LD +M C P++V YT MI + ++A L M KG PNV
Sbjct: 727 KDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVV 786
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +MI GF AGK D+ + +EM S+GC PNF+ Y L+++ G L EA+ ++ M
Sbjct: 787 TYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEM 846
Query: 282 VEK------GKYIHLVSKFKR 296
+ Y ++ +KR
Sbjct: 847 KQTYWPKHVSSYCKVIEGYKR 867
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 3/202 (1%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P +TYN ++ R KLD + EM G S D T L K
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVG 290
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K AL+L+ ++ F P+ + + ++ GL A + F + M + C+P+V Y
Sbjct: 291 KWREALSLI---EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYR 347
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + +L + + + MI +G P+ +NS++ +C + F A ++K+ME
Sbjct: 348 ILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKC 407
Query: 250 GCNPNFLVYNTLVSNLRNAGKL 271
C P ++VYN L+ ++ + G+L
Sbjct: 408 ECKPGYVVYNILIGSICSGGEL 429
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 44/317 (13%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+ N+LI C GL +E + K F ++P + +YNA++ L + + V++
Sbjct: 206 GKLLNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHR 265
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+MS+ G + D T A ++GK + L++ + F P+ YN ++ L +
Sbjct: 266 EMSELGLSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEAS 322
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD----- 184
A++ LN M+ P+V + L+ G L CK M +GC P
Sbjct: 323 FFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFN 382
Query: 185 ------------------------------VVCYTVMITSYIAAGEL------EKAQDLF 208
V Y ++I S + GEL E A+ +
Sbjct: 383 SLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAY 442
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M++ G + N S R C GKF++A ++ EM G P+ Y+ ++ L NA
Sbjct: 443 NEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502
Query: 269 GKLAEAHEVIRHMVEKG 285
++ A + + M G
Sbjct: 503 SRVENAFFLFKEMKGTG 519
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 123/321 (38%), Gaps = 47/321 (14%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F +C G+ A ++E+ +F P YN ++ L ++ +M
Sbjct: 282 FAQALCKVGKWREALSLIEKE------DFVPNTILYNKMISGLCEASFFEEAMDFLNRMR 335
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
P++ TY I++C +L + R+L M G P + +N L+H K D
Sbjct: 336 STSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFS 395
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF-------------------- 172
A LL M++ P + + L+ + G L F
Sbjct: 396 YAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKV 455
Query: 173 ---------------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
EM G +PD Y+ +I A +E A LF M
Sbjct: 456 NVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEM 515
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G +P+V+TY +I F AG +A + EM GC P + Y TL+ A K+
Sbjct: 516 KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKV 575
Query: 272 AEAHEVIRHMVEKGKYIHLVS 292
+ A+E+ M+ KG + ++++
Sbjct: 576 SVANELFELMIAKGCFPNVIT 596
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 3/155 (1%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL L +K+ G+ P+ + + L+ RA LD + EM+ G D
Sbjct: 224 VALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFA 283
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G+ +A L + + +PN YN MI G C A F+EA + M S C
Sbjct: 284 QALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCI 340
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
PN Y L+ N +L ++ M+ +G Y
Sbjct: 341 PNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCY 375
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 90/175 (51%), Gaps = 4/175 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M +G AP+ +TY +++ G LD+ + LL+EM ++ + +Y ++ G
Sbjct: 807 LFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIE--G 864
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM--ANKGCMPD 184
+ + +L LL +++ G P +L + L+D +AG L+ E+ A+
Sbjct: 865 YKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAK 924
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
YT +I S+ A ++ A +LF MI G +P++ T+ ++ G +++EA
Sbjct: 925 KNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEA 979
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 149/306 (48%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H+
Sbjct: 92 TKEHKFRVPFDTC------RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHS 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + V+ ++ P ++++N +M +LG LD+ RL + M SG PD
Sbjct: 146 FVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ D++ Y +I G+L++AQDL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ ++ + L +YN +++ L
Sbjct: 232 MLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SADLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G MP VV
Sbjct: 409 RDGYMPSVV 417
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 15/312 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TFN+LI C G+V A+K++ I+S + P +YN+++
Sbjct: 251 MLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIV---PDLVTYNSLIEGFCM 307
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M +G PD+++YN+++ + K+++ +L +EM G P+ T
Sbjct: 308 VGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 367
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ LL + K A L + MK G + + +DGL + L F E+
Sbjct: 368 YDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELK 427
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ ++ +I AG+LE A +LF+ + +G PNV TY MI GFC G+ D
Sbjct: 428 SSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVD 487
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK---------GKYI 288
+A ++++ME+ GC P+ + YNTL+ + KL E +++ M +K +
Sbjct: 488 KANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVV 547
Query: 289 HLVSKFKRYKRC 300
++SK ++Y+ C
Sbjct: 548 DMLSKDEKYQEC 559
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 22/300 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ G+ T+N LI C + A ++ F++ + P +Y ++ L G
Sbjct: 130 ILRRGYSPNIVTYNTLIKGLCMEHRISEATRL---FLRMQKLGCTPDVVTYGTLIKGLCG 186
Query: 58 IRQYKLIEWVYQQMSDE------GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG- 110
+ ++Q+M ++ P+++TYNI++ ++G+ D+ +L +EM G
Sbjct: 187 TGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGM 246
Query: 111 ---------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
PD T+N+L+ L K K + A LL M E G P ++ + +L++G
Sbjct: 247 IPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFC 306
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G+L++ + F M +KGC PDV+ Y V+I Y ++E+A L++ M+ G+ PNV
Sbjct: 307 MVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVI 366
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+S+++G +AGK D+A + M++ G N Y + L L EA ++ +
Sbjct: 367 TYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTEL 426
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 155/306 (50%), Gaps = 23/306 (7%)
Query: 7 PTTA-RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
PT + +FN L+ ++ +V + + +L + + N +L+ L + + +
Sbjct: 65 PTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGF 124
Query: 66 WVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + GY+P+I+TYN + +C ++R+ + RL M + G +PD TY L+
Sbjct: 125 AAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS---EATRLFLRMQKLGCTPDVVTYGTLI 181
Query: 123 HVL-GKGDKPLAA---LNLLNHMK--EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
L G G+ +A +LN + E+ P+V+ + ++DGL + G D K F+EM
Sbjct: 182 KGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEM 241
Query: 177 A----------NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
++G PD+V + V+I + G++ +A+ L MI G +P++ TYNS+
Sbjct: 242 KTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSL 301
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I GFCM G + A + M S+GC P+ + YN L++ K+ EA ++ M+ GK
Sbjct: 302 IEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK 361
Query: 287 YIHLVS 292
++++
Sbjct: 362 RPNVIT 367
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 6/186 (3%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M RS +P ++N LL L K +L N M+ G L++ L
Sbjct: 60 MMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNR 119
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
L F + +G P++V Y +I + +A LF M G P+V TY +
Sbjct: 120 LREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGT 179
Query: 226 MIRGFCMAGKFDEACTMMKEME---SR---GCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+I+G C G + A + +EM SR C PN + YN +V L G+ EA ++
Sbjct: 180 LIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFE 239
Query: 280 HMVEKG 285
M +G
Sbjct: 240 EMKTQG 245
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+ + M PS+ F L+ GL++ + +++M G D +++
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
L + F G++ +G PN+ TYN++I+G CM + EA + M+ GC P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ + Y TL+ L G + A ++ + M+
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEML 201
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ A ++ E+ P +Y ++H Q + Q+M G
Sbjct: 445 LCKAGKLETAWELFEKLSNE---GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGC 501
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PDI+TYN +M Y KL++ +LL M + SPD T +I++ +L K +K L+
Sbjct: 502 TPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLH 561
Query: 137 LL 138
LL
Sbjct: 562 LL 563
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 162 RAGNLDACK--YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ GN+ A +FF M P + + +++ + L++ M G +
Sbjct: 44 KTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSD 103
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
T N ++ C + E + RG +PN + YNTL+ L +++EA +
Sbjct: 104 RCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFL 163
Query: 280 HMVEKG 285
M + G
Sbjct: 164 RMQKLG 169
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 141/293 (48%), Gaps = 18/293 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M +G T+++LI C G AR V + ++ +P Y+ +LH
Sbjct: 296 MSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRK---GQKPNSTIYHILLHGYAT 352
Query: 54 --ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
AL+ +R + M +G + +NI++CA + G +D+ EM ++G
Sbjct: 353 KGALIDVRD------LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 406
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD +Y+ ++H+L K + A+ N M G P+++ FT+L+ GL G +
Sbjct: 407 RPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 466
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
EM N+G PD + ++ + G + +AQD FD +I G P+V +YN++I G+C
Sbjct: 467 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYC 526
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GK DE+ + M S G P+ YN+L++ G++ +A + R M K
Sbjct: 527 FVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK 579
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 99/193 (51%), Gaps = 3/193 (1%)
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG---FDPSVLHF 153
D + M G++PD +YN L+ L K AL LL HM G P+V+ +
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSY 203
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
T++DG + G +D + F EM +G PDVV Y +I A ++KA + M
Sbjct: 204 NTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFD 263
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG +P+ TYN MIRG+C G+ +EA ++K+M G P+ + Y+ L+ G+ AE
Sbjct: 264 KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAE 323
Query: 274 AHEVIRHMVEKGK 286
A V MV KG+
Sbjct: 324 ARSVFDSMVRKGQ 336
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P T+N LI C + A +++ + P +YN ++
Sbjct: 226 MMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVM---PDTRTYNIMIRGYCS 282
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q + + ++MS G PD++TY++++ ++G+ + + D M R G P+
Sbjct: 283 LGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 342
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILLH + +LL+ M G F L+ ++ G +D F EM
Sbjct: 343 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 402
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDVV Y+ +I G +E A F+ M+++G PN+ ++ S+I G C G++
Sbjct: 403 QNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 462
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + EM +RG +P+ + NT++ NL G++ EA + ++ G +VS
Sbjct: 463 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVS 517
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 35/327 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G P R FNILIC + G K + F + + RP SY+ ++H L +
Sbjct: 366 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGR 425
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + QM EG +P+I+++ ++ +G+ + L EM G PD N
Sbjct: 426 VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNT 485
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + + A + + + +G P V+ + TL+DG G +D D M + G
Sbjct: 486 IMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIG 545
Query: 181 CMPDVVCYTVMITSYIAAGELEK-----------------------------------AQ 205
PD Y ++ Y G +E A+
Sbjct: 546 LRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAAR 605
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L+ M+ +G + TYN+++ G C DEA M +++ S+ + ++ +++ L
Sbjct: 606 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINAL 665
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ EA + MV +G +++
Sbjct: 666 LKVGRIDEAKSLFSAMVLRGPVPDVIT 692
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 138/292 (47%), Gaps = 10/292 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M+ +G A ILI CT G + LA F+K+ +R + N ++ L
Sbjct: 82 MVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKT---GWRVQNVTLNQLIKGLCD 138
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG---FSP 113
G R ++ V+++M + GY PD+ +YN ++ K + LL M G SP
Sbjct: 139 GNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSP 198
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ +YN ++ K + A L + M G P V+ + +L+DGL +A +D
Sbjct: 199 NVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAIL 258
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M +KG MPD Y +MI Y + G+LE+A L M G P+V TY+ +I+ +C
Sbjct: 259 QHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKI 318
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ EA ++ M +G PN +Y+ L+ G L + +++ M+ G
Sbjct: 319 GRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 38/292 (13%)
Query: 39 FNFRPFKNSYNAILHAL-LGIRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGK 95
+ P SYNA++ L + + + +E + +D GY +P++++YN V+ ++ G+
Sbjct: 156 LGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGE 215
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+D+ + L EM G PD TYN L+ L K A+ +L HM + G P +
Sbjct: 216 VDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNI 275
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++ G G L+ +M+ G PDVV Y+++I Y G +A+ +FD M+ KG
Sbjct: 276 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKG 335
Query: 216 QLPNVFTYNSMIRGFCMAGKF-----------------------------------DEAC 240
Q PN Y+ ++ G+ G D+A
Sbjct: 336 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 395
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
T EM G P+ + Y+T++ L G++ +A MV +G +++S
Sbjct: 396 TAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIIS 447
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G RT+NI+I C+ G++ A +++++ S L +P +Y+ ++
Sbjct: 261 MFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL---QPDVVTYSLLIQYYCK 317
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + V+ M +G P+ Y+I++ G L LLD M R G +
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ K A+ M++ G P V+ ++T++ L + G ++ Y F++M
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P+++ +T +I + GE +K ++L MI +G P+ N+++ C G+
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + G P+ + YNTL+ GK+ E+ + + MV G
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIG 545
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 12/171 (7%)
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-------FFDEMA 177
LG+ D ALNL + + SV F +++ ++RA + + ++ F+ M
Sbjct: 28 LGRED----ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMV 83
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G ++I + G L+ A F + G T N +I+G C + D
Sbjct: 84 RSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTD 143
Query: 238 EACTMM-KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+A M+ + M G P+ YN L+ L K EA E++ HM G Y
Sbjct: 144 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGY 194
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 120/216 (55%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M D+G APDI+TYN+V+ + G++D L+ + G P+ +YNI+L L +
Sbjct: 6 EMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAE 65
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A L+ M G P+V+ F L+ L R G ++ +++ GC P+ + Y
Sbjct: 66 RWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYN 125
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ ++ +++KA + M+++G P++ +YN+++ C G+ D A ++ +++ +
Sbjct: 126 PLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGK 185
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC+P + YNT++ L AGK EA E++ M+ KG
Sbjct: 186 GCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKG 221
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 142/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N++ IC G V A + +E + P SYN +L L
Sbjct: 7 MRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPS---YGGEPNTVSYNIVLKGLFT 63
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + ++M+ +G P+++T+N+++ R G ++ +L+++ + G +P+ +
Sbjct: 64 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLS 123
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LLH K K A+ + M G P ++ + TL+ L R G +D ++
Sbjct: 124 YNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLK 183
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P ++ Y +I AG+ ++A +L D MI+KG P++ TY ++ G C K +
Sbjct: 184 GKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIE 243
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA +++ G P ++YN ++ L + A ++ +M+ G
Sbjct: 244 EAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNG 291
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 107/192 (55%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+LLDEM G +PD TYN++L+ + + + A+ L ++ G +P+ + + ++ GL
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
A + + +EMA+KGC P+VV + ++I+ G +E A ++ + + G PN
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+YN ++ FC K D+A ++ M SRGC P+ + YNTL++ L G++ A +++
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 281 MVEKGKYIHLVS 292
+ KG L+S
Sbjct: 182 LKGKGCSPVLIS 193
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 113/266 (42%), Gaps = 41/266 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P TFN+LI C G V A +V+E+ K + P SYN +LHA
Sbjct: 77 MAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPK---YGCTPNSLSYNPLLHAFCK 133
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + M G PDI++YN ++ A R G++D LL ++ G SP +
Sbjct: 134 QKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLIS 193
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA-----CKY- 171
YN ++ L K K AL LL+ M G P ++ +TT+ GL R ++ CK
Sbjct: 194 YNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQ 253
Query: 172 -----------------------------FFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F M + GCMP+ YT+++ G ++
Sbjct: 254 DMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGLVK 313
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIR 228
+A+DL + ++G + F ++
Sbjct: 314 EARDLLGQLCSRGVVNKKFMKKGAVK 339
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%)
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ LL+ M++ G P ++ + +++G+ + G +D F + + + G P+ V Y +++
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
A E A+ L + M KG PNV T+N +I C G + A +++++ GC PN
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L YN L+ K+ +A + MV +G Y +VS
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVS 158
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 6/278 (2%)
Query: 14 NILICTCG--EVGLARKVVE--RFI-KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
N+LIC + +A K+ + RF+ + +L P +YN ++ + Q + +
Sbjct: 205 NLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELI 264
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG-FSPDFHTYNILLHVLGK 127
+M +G PD ++Y VM + ++ + L+++M + PD TYN L+H+L K
Sbjct: 265 AEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSK 324
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL L +E GF + ++ +++ G +D K +EM KGC PDVV
Sbjct: 325 HGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVT 384
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT ++ G++E+A+ + M G PN +Y +++ G C G EA MM E
Sbjct: 385 YTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSE 444
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + Y+ ++ LR GKL+EA +V+R M+ KG
Sbjct: 445 EDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKG 482
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 138/280 (49%), Gaps = 1/280 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP T+N L+ + G A + +E +++ F+ K Y+AI+++ + +
Sbjct: 309 FPDQV-TYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAK 367
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ +M +G +PD++TY V+ ++GK+++ ++L +M + G P+ +Y LL+ L
Sbjct: 368 EIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGL 427
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ L A ++N +E + P+ + ++ +M GL R G L EM KG P
Sbjct: 428 CQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTP 487
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V ++I S ++ +A+ + + +G N + ++I GFC + D A +++ +
Sbjct: 488 VEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDD 547
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M +P+ + + ++ L G++ EA M++KG
Sbjct: 548 MYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKG 587
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 132/277 (47%), Gaps = 4/277 (1%)
Query: 17 ICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
+C + R ++E+ +K +KLF P + +YN ++H L ++ + G
Sbjct: 286 LCQDKRIKEVRNLMEKMVKDNKLF---PDQVTYNTLVHMLSKHGHADEALEFLRETEERG 342
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ D + Y+ ++ + G++D+ +++EM G SPD TY +++ L K K A
Sbjct: 343 FQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAK 402
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+L M + G P+ + +T L++GL + GN + + P+ + Y+V++
Sbjct: 403 KMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGL 462
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G+L +A D+ M+TKG P N +I+ C+ K +EA M+E +RGC N
Sbjct: 463 RREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNA 522
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + T++ + + A ++ M K+ V+
Sbjct: 523 VNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVT 559
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 36/248 (14%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL---- 122
V M G P++L N + KL++ R L+ M G +P+ TYN L+
Sbjct: 193 VLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGYC 252
Query: 123 ------HVLG-------KG-----------------DKPLAAL-NLLNHM-KEVGFDPSV 150
H + KG DK + + NL+ M K+ P
Sbjct: 253 DLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQ 312
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + TL+ LS+ G+ D F E +G D V Y+ ++ S+ G +++A+++ +
Sbjct: 313 VTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNE 372
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
MITKG P+V TY +++ G C GK +EA M+++M GC PN + Y L++ L G
Sbjct: 373 MITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGN 432
Query: 271 LAEAHEVI 278
EA E++
Sbjct: 433 SLEAREMM 440
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P K SY ++ L ++ K + + ++M D PD +TYN ++ + G D+
Sbjct: 274 PDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALE 333
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L E GF D Y+ +++ + A ++N M G P V+ +T +++GL
Sbjct: 334 FLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLC 393
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G ++ K +M GC P+ V YT ++ G +A+++ + PN
Sbjct: 394 KVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAI 453
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY+ ++ G GK EAC +++EM ++G P + N L+ +L K+ EA + +
Sbjct: 454 TYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEEC 513
Query: 282 VEKGKYIHLVS 292
+ +G ++ V+
Sbjct: 514 LNRGCAVNAVN 524
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 111/243 (45%), Gaps = 36/243 (14%)
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
VM + R GKL ++L M ++G P+ N +HVL +K AL L M+ VG
Sbjct: 177 VMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVG 236
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P+V+ + L+ G ++ EM KGC PD V Y ++ +++ +
Sbjct: 237 ITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVR 296
Query: 206 DLFDGMITKGQL-PNVFTYNSMI---------------------RG-------------- 229
+L + M+ +L P+ TYN+++ RG
Sbjct: 297 NLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNS 356
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
FCM G+ D A ++ EM ++GC+P+ + Y +V+ L GK+ EA ++++ M + G +
Sbjct: 357 FCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPN 416
Query: 290 LVS 292
VS
Sbjct: 417 TVS 419
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ D Y ++L VL K A +L M G F +M SRAG L
Sbjct: 132 YRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAM 191
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M G P+++ I + A +LEKA + M G PNV TYN +I+G+
Sbjct: 192 QVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGY 251
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK---- 286
C + + A ++ EM +GC P+ + Y T++ L ++ E ++ MV+ K
Sbjct: 252 CDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPD 311
Query: 287 ------YIHLVSK 293
+H++SK
Sbjct: 312 QVTYNTLVHMLSK 324
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/173 (19%), Positives = 71/173 (41%), Gaps = 2/173 (1%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD +T+ ++ A + G++++ +M + G P TY ++H K + + L
Sbjct: 555 PDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKL 614
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M + + +++ L GN +A + D +++ SY++
Sbjct: 615 LGKM--LSRSKCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLS 672
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
G A + M + +P++ + + + GK +EA +M + RG
Sbjct: 673 KGIPLSAYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRG 725
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 136/256 (53%), Gaps = 6/256 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +S+N +L L I Y + +Y +M G +PD+ T +I+ + ++ +
Sbjct: 89 PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ + R G+ P+ TY L+ L + A L M+++G P+ + + TL+ GL +
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208
Query: 163 AGNLDACKYFFDEMANKG------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
GN++ EM N C P V+ Y+++I G ++A++LF+ M +G
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
+P+V +Y+++I GFC AGK+D++ + EM +G P+ + ++ L+ L GK+ EA +
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328
Query: 277 VIRHMVEKGKYIHLVS 292
++ M+++G +L++
Sbjct: 329 LLEVMIQRGIVPNLIT 344
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 142/283 (50%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL---FNFRPFKNSYNAILHALLGI 58
G A T+ LI C G V +A K+ + + N +P +Y+ I+ L +
Sbjct: 191 GCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKV 250
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + ++++M +G PD+++Y+ ++ GK DQ L DEM G PD T+
Sbjct: 251 GREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF 310
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++L+ L K K A LL M + G P+++ + +L+DG G+L++ + F M +
Sbjct: 311 SVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS 370
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I Y ++++A +L++ M+ G+ PNV TY ++++G GK +
Sbjct: 371 KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGD 430
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + M++ G + N +Y + L L EA E+ +
Sbjct: 431 AKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNEL 473
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 140/287 (48%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF++LI C G+V A+K++E I+ + P +YN+++
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIV---PNLITYNSLIDGFCM 354
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M +G PD ++Y ++ + K+ + L +EM + G SP+ T
Sbjct: 355 VGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTT 414
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LL L + K A L MK G + + +DGL + L F+E+
Sbjct: 415 YGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELK 474
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ ++ Y+ +I AG+LE A +LF+ + +G P+V TYN MI GFC G+ D
Sbjct: 475 SYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVD 534
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A + ++ME GC P+ + YNTL+ KL E +++ MV+K
Sbjct: 535 NANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 130/246 (52%), Gaps = 6/246 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHR-L 102
+Y ++ L + ++ +M G P+ +TY ++ + G ++ + H+ +
Sbjct: 163 TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEM 222
Query: 103 LDEMGRSGFS--PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L++ + G + P TY+I++ L K + A L MK G P V+ ++TL+ G
Sbjct: 223 LNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
AG D K+ FDEM ++G PD+V ++V+I + G++ +A+ L + MI +G +PN+
Sbjct: 283 CCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNL 342
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYNS+I GFCM G + A + M S+G P+ + Y TL++ K+ EA +
Sbjct: 343 ITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNE 402
Query: 281 MVEKGK 286
M++ GK
Sbjct: 403 MLQVGK 408
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 127/257 (49%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N LI C G++ AR E F+ P + SY +++
Sbjct: 333 MIQRGIVPNLITYNSLIDGFCMVGDLNSAR---ELFLSMPSKGLEPDEISYTTLINGYCK 389
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K +Y +M G +P++ TY ++ ++ GK+ +L M G S +
Sbjct: 390 TWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQI 449
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I L L K D A+ L N +K F ++ +++ L+DGL +AG L+ F++++
Sbjct: 450 YGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLS 509
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PDVV Y +MI + G+++ A LF+ M G P++ YN+++ GFC K +
Sbjct: 510 QEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLE 569
Query: 238 EACTMMKEMESRGCNPN 254
E ++ +M + +PN
Sbjct: 570 EVIKLLHKMVQKDVSPN 586
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 126/259 (48%), Gaps = 6/259 (2%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA------PDILTYNIV 86
F++ + P +Y ++ L + ++++M ++ P ++TY+I+
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+ ++G+ D+ L +EM G PD +Y+ L+H K + +L + M + G
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
P ++ F+ L+D L + G + K + M +G +P+++ Y +I + G+L A++
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE 363
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
LF M +KG P+ +Y ++I G+C K EA + EM G +PN Y TL+ L
Sbjct: 364 LFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLF 423
Query: 267 NAGKLAEAHEVIRHMVEKG 285
GK+ +A ++ M G
Sbjct: 424 QKGKVGDAKKLFGVMKTYG 442
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++I+I +VG + E F + K P SY+ ++H ++ + ++ +M
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D+G PD++T+++++ + GK+ + +LL+ M + G P+ TYN L+
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+A L M G +P + +TTL++G + + ++EM G P+V Y +
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ G++ A+ LF M T G N Y + G C EA + E++S
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N Y+ L+ L AGKL A E+ + ++G
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEG 512
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 7/211 (3%)
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
C + + FH D M RS P ++N LL L K + +L N M+ G
Sbjct: 65 CKTGNITAIQAFH-FFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLS 123
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + + L + L + + +G +P+VV YT +I + +A L
Sbjct: 124 PDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRL 183
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG------CNPNFLVYNTL 261
F M G PN TY ++I+G C G + A + KEM + C P + Y+ +
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ L G+ EA E+ M +G ++S
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 74/135 (54%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
+ +E F + K +NF+ +Y+ ++ L + + +++++S EG PD++TYNI++
Sbjct: 465 EAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMI 524
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
++G++D + L ++M +G +PD YN LL +G+K + LL+ M +
Sbjct: 525 HGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVS 584
Query: 148 PSVLHFTTLMDGLSR 162
P+ T ++D L +
Sbjct: 585 PNAASCTIVVDMLCK 599
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 3/114 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ A ++ E+ + L +P +YN ++H + Q ++++M + G
Sbjct: 492 LCKAGKLETAWELFEKLSQEGL---QPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGC 548
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
PDI+ YN ++C KL++ +LL +M + SP+ + I++ +L K +K
Sbjct: 549 TPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 63/142 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ ++ + +I Y+ ++ + GKL+ L +++ + G PD TYNI++H
Sbjct: 469 LFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFC 528
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A L M+E G P ++ + TL+ G L+ +M K P+
Sbjct: 529 KVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAA 588
Query: 187 CYTVMITSYIAAGELEKAQDLF 208
T+++ + +K DL
Sbjct: 589 SCTIVVDMLCKDEKYKKFVDLL 610
>gi|334185431|ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product [Arabidopsis thaliana]
gi|332642528|gb|AEE76049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1440
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 129/244 (52%), Gaps = 2/244 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N +I G GLA + F++ +L F P +YN++L+A R + ++ VYQQM
Sbjct: 334 TYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDK 130
G+ D +TYN ++ + G+LD +L +M G SG +PD TY +L+ LGK ++
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ A L++ M +VG P++ ++ L+ G ++AG + + F M G PD + Y+V
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSV 513
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR- 249
M+ + E KA L+ MI+ G P+ Y MI G + D+ +++ME
Sbjct: 514 MLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELC 573
Query: 250 GCNP 253
G NP
Sbjct: 574 GMNP 577
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 1 MIEN-GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+ N G A T+N L+ C V+ F + +P +YNA++
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCG 346
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
E ++ ++ +G+ PD +TYN ++ A R ++ + +M + GF D TYN
Sbjct: 347 LAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++H+ GK + AL L MK + G +P + +T L+D L +A EM +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G P + Y+ +I Y AG+ E+A+D F M+ G P+ Y+ M+ + +
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + ++M S G P++ +Y ++ L + + + IR M E
Sbjct: 527 AWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEE 571
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-------PDILTYNIVMCA 89
+ N R + + ++ A+LG+ L W + ++ E + + YN +M
Sbjct: 179 EWLNLRHWHSPNARMVAAILGV----LGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGV 234
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK--GDKPLAALNLLNHMKEVGFD 147
R GK + L+D M + G PD ++N L++ K G P A+ LL+ ++ G
Sbjct: 235 YSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR 294
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + + TL+ SR NLD F++M C PD+ Y MI+ Y G +A+ L
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F + KG P+ TYNS++ F ++ + ++M+ G + + YNT++
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 268 AGKLAEAHEVIRHM 281
G+L A ++ + M
Sbjct: 415 QGQLDLALQLYKDM 428
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 108/246 (43%), Gaps = 1/246 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
RP +YN +L A V++ M PD+ TYN ++ R G +
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
RL E+ GF PD TYN LL+ + + M+++GF + + T++
Sbjct: 353 RLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMY 412
Query: 161 SRAGNLDACKYFFDEMAN-KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ G LD + +M G PD + YTV+I S A +A L M+ G P
Sbjct: 413 GKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPT 472
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ TY+++I G+ AGK +EA M G P+ L Y+ ++ L + +A + R
Sbjct: 473 LQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYR 532
Query: 280 HMVEKG 285
M+ G
Sbjct: 533 DMISDG 538
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 3/241 (1%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL--DQFHRLLDE 105
YNA++ ++ + + M G PD++++N ++ A+ + G L + LLD
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ SG PD TYN LL + A+ + M+ P + + ++ R G
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ F E+ KG PD V Y ++ ++ EK ++++ M G + TYN+
Sbjct: 348 AAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNT 407
Query: 226 MIRGFCMAGKFDEACTMMKEMES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I + G+ D A + K+M+ G NP+ + Y L+ +L A + EA ++ M++
Sbjct: 408 IIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDV 467
Query: 285 G 285
G
Sbjct: 468 G 468
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 139/331 (41%), Gaps = 46/331 (13%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNF--RPFKNSYNAILHALLGIRQYKLIE 65
+ ++ ++ C G A +VV + ++K F+F P Y I+ A + ++ E
Sbjct: 717 SVCKSMVVVYCKLGFPETAHQVVNQ-AETKGFHFACSPM---YTDIIEAYGKQKLWQKAE 772
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V + G PD+ T+N +M A + G ++ + + M R G SP + NILLH L
Sbjct: 773 SVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ ++ ++++GF S ++D +RAGN+ K + M G +P +
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTI 892
Query: 186 VCYTVMIT----------SYIAAGELEKAQ-------------------------DLFDG 210
Y +MI + I E+E+A ++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ G P+ TYN++I +C + +E +M++M + G +P Y +L+S
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKC 1012
Query: 271 LAEAHEVIRHMVEKG-----KYIHLVSKFKR 296
L +A ++ ++ KG + H + K R
Sbjct: 1013 LEQAEQLFEELLSKGLKLDRSFYHTMMKISR 1043
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T R + ++I C V A +V ++ NF+ +N++L
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA---NFKVELAIWNSMLKMYTA 939
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I YK VYQ++ + G PD TYN ++ R + ++ + L+ +M G P T
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDT 999
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ GK A L + G + T+M +G+ + M
Sbjct: 1000 YKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G P + +++ SY ++G ++A+ + + Y+S+I + + ++
Sbjct: 1060 NAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYN 1119
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
+ EM+ G P+ ++ V
Sbjct: 1120 SGIERLLEMKKEGLEPDHRIWTCFV 1144
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
++G +T+N L+ CG AR + ++ P S N +LHAL
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD---GPSPTVESINILLHALCVDG 836
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + V +++ D G+ + +++ A R G + + ++ M +G+ P Y
Sbjct: 837 RLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYR 896
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ +L KG + A +++ M+E F + + +++ + + + +
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD Y +I Y E+ L M G P + TY S+I F ++A
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ S+G + Y+T++ R++G ++A ++++ M G
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 126/284 (44%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T + NIL+ C G + VVE + F+ K+S +L A
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL---QDMGFKISKSSILLMLDAFAR 869
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +Y M GY P I Y +++ + ++ ++ EM + F +
Sbjct: 870 AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAI 929
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N +L + + + + +KE G +P + TL+ R + +M
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G P + Y +I+++ LE+A+ LF+ +++KG + Y++M++ +G
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDS 1049
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+A +++ M++ G P + L+ + ++G EA +V+ ++
Sbjct: 1050 KAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNL 1093
>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 707
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 126/246 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S + +L + +R+ V M G+A ++ YNI++ R + + LL EM
Sbjct: 109 SLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREM 168
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
++ PD +YN ++ +G + AL L N M+ G S++ + L+D +AG +
Sbjct: 169 RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D EM +KG D++ YT +I + GEL++ + LFD ++ +G P TYN++
Sbjct: 229 DEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
IRGFC G+ EA + + M RG PN Y L+ L GK EA +++ M++K +
Sbjct: 289 IRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDE 348
Query: 287 YIHLVS 292
++V+
Sbjct: 349 EPNVVT 354
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 133/263 (50%), Gaps = 3/263 (1%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
+ G A V+ +K + F F + +YN +L L ++ + ++M PD++
Sbjct: 122 KTGFAHGVLALMLK-RGFAFNVY--NYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVV 178
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
+YN V+ +L++ +L +EM SG S T+ IL+ K K A+ LL M
Sbjct: 179 SYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEM 238
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
K G + ++ +T+L+ G G LD K FDE+ +G P + Y +I + G L
Sbjct: 239 KHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRL 298
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A ++F+ M+ +G PNV+TY +I G C GK EA ++ M + PN + YN +
Sbjct: 299 KEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNII 358
Query: 262 VSNLRNAGKLAEAHEVIRHMVEK 284
++ L +A+A E++ M ++
Sbjct: 359 INKLCKDSLVADALEIVELMKKR 381
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 138/277 (49%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWV 67
T+N L+ C G++ A K++ +K + P S+NA++H L G R ++ ++ +
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYT-DPDVISFNALIHGLCKGNRLHQALD-I 446
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y + ++ A DI+T NI++ + + G +++ L ++ S P+ TY ++ K
Sbjct: 447 YDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCK 506
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A LL M+ PSV + L+ L + G LD F+EM PDV+
Sbjct: 507 TGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVIS 566
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ +MI + AG+++ A+ L GM G P++FTY+ +I F G DEA + +M
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMI 626
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + ++++ + G+ + E ++ +V+K
Sbjct: 627 DSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDK 663
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 12/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF +NIL+ C E G A ++ ++ L P SYN ++
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLM---PDVVSYNTVIRGFCE 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + +M G + ++T+ I++ A + GK+D+ LL EM G D
Sbjct: 190 GKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIV 249
Query: 118 YNILLHVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
Y L+ G+ D+ A L + + E G P + + TL+ G + G L F+
Sbjct: 250 YTSLIRGFCDCGELDRGKA---LFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFE 306
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M +G P+V YT +I G+ ++A L + M+ K + PNV TYN +I C
Sbjct: 307 FMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDS 366
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+A +++ M+ R P+ + YN+L+ L G L EA +++ M++ Y
Sbjct: 367 LVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSY 419
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 138/297 (46%), Gaps = 8/297 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G A T+N LI C G + A ++ E ++ RP +Y ++ L G
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMER---GVRPNVYTYTGLIDGLCG 329
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + K + M + P+++TYNI++ + + +++ M + PD T
Sbjct: 330 VGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNIT 389
Query: 118 YNILLHVL-GKGDKPLAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
YN LL L KGD A+ L +K+ + DP V+ F L+ GL + L +D
Sbjct: 390 YNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDL 449
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ K D+V +++ S + +G++ KA +L+ + +PN TY +MI GFC G
Sbjct: 450 LVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGM 509
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ A ++ +M P+ YN L+S+L G L +A + M + ++S
Sbjct: 510 LNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVIS 566
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 16/294 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ T+NI+I C V A ++VE K + RP +YN++L L
Sbjct: 343 MLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRT---RPDNITYNSLLGGLCA 399
Query: 58 IRQY-KLIEWVYQQMSDEGYA-PDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGF 111
+ + +Y + D Y PD++++N + +C RL + LD + L++++G
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLG---- 455
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+ D T NILL+ K A+ L + P+ +TT++DG + G L+ K
Sbjct: 456 AGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKG 515
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+M P V Y +++S G L++A LF+ M P+V ++N MI G
Sbjct: 516 LLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSL 575
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG A +++ M G +P+ Y+ L++ G L EA M++ G
Sbjct: 576 KAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSG 629
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 13/175 (7%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P + +N L+ C G + A ++ E + F P S+N ++ L K
Sbjct: 525 LPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSF---PDVISFNIMIDGSLKAGDIK 581
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E + MS G +PD+ TY+ ++ +LG LD+ D+M SGF PD H + +L
Sbjct: 582 SAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVL 641
Query: 123 HVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL-SRAGNLDACKYFF 173
G+ DK + L K+V D + T+MD + S +GN+D K
Sbjct: 642 KYCISQGETDKLTEFVKKLVD-KDVVLDKELT--CTVMDYMCSSSGNMDIAKRLL 693
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 64/137 (46%)
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
LM L R+ N + F+ +M + V + ++ ++ + A + M+ +G
Sbjct: 78 LMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRG 137
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
NV+ YN +++G C +F +A ++++EM P+ + YNT++ +L +A
Sbjct: 138 FAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKAL 197
Query: 276 EVIRHMVEKGKYIHLVS 292
++ M G LV+
Sbjct: 198 QLANEMQGSGCSWSLVT 214
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 147/289 (50%), Gaps = 17/289 (5%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P A +F IL+ C+C ++ A + F K F P +++ +LH L +
Sbjct: 110 PCNAYSFTILMKCFCSCSKLPFA---LSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISE 166
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ QM P+++T+ +M R G++ + LLD M G P+ TY ++
Sbjct: 167 ALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222
Query: 124 VLGKGDKPLAALNLLNHMKEVG-FDPSVLHF-----TTLMDGLSRAGNLDACKYFFDEM- 176
+ K ++ALNLL M+EV P+V+ + T +++G +G + EM
Sbjct: 223 GMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEML 282
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
K PDVV Y +I +++ G+ +A++L+D M+ +G +P+ TY+SMI GFC +
Sbjct: 283 ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A M M ++GC+P+ + +NTL++ A ++ + +++ M E G
Sbjct: 343 DAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAG 391
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 142/305 (46%), Gaps = 22/305 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVE-RFIKSKLFNFRPFKNSYNAIL 52
M+E+G T+ ++ C G+ + L RK+ E IK + + P + ++
Sbjct: 205 MLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIW-PLERR-TCMI 262
Query: 53 HALLGIRQYKLIEWVYQQMSD-EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+ ++ + + Q+M + + +PD++TYN ++ A + GK + L DEM G
Sbjct: 263 NGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 322
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
P TY+ ++ K ++ AA ++ M G P ++ F TL+ G RA +D
Sbjct: 323 IPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIK 382
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
EM G + + + YT +I + G+L AQDL M++ G PNV T N+++ G C
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC 442
Query: 232 MAGKFDEACTMMKEMESR-----------GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
GK +A M K M+ G P+ YN L+S L N GK EA E+
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502
Query: 281 MVEKG 285
M +G
Sbjct: 503 MPHRG 507
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 152/344 (44%), Gaps = 55/344 (15%)
Query: 6 FPTTARTFNI-LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
+P RT I C+ G A+++++ ++ K P +YNA+++A + ++
Sbjct: 253 WPLERRTCMINGFCSSGRWSEAQQLLQEMLERK--KISPDVVTYNALINAFVKEGKFFEA 310
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E +Y +M G P +TY+ ++ + +LD + M G SPD T+N L+
Sbjct: 311 EELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAG 370
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + + LL+ M E G + + +TTL+ G + G+L+A + EM + G P+
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430
Query: 185 VV----------------------------------------------CYTVMITSYIAA 198
VV Y ++I+ I
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE 490
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+ +A++L++ M +G +P+ TYNS+I G C + DEA M M S+ +PN + +
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 550
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
TL++ AG++ + E+ M +G YI L+ F++
Sbjct: 551 TTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRK 594
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 128/291 (43%), Gaps = 46/291 (15%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++++ + E ++ M+ +G +PDI+T+N ++ R ++D +L
Sbjct: 324 PSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKL 383
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM +G + TY L+H + AA +LL M G P+V+ TL+DGL
Sbjct: 384 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCD 443
Query: 163 AGNL-DACKYF---------------------------------------------FDEM 176
G L DA + F ++EM
Sbjct: 444 NGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++G +PD + Y +I L++A +FD M +K PNV T+ ++I G+C AG+
Sbjct: 504 PHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 563
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
D+ + EM RG N + Y TL+ R G + A ++ + M+ G Y
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 17/277 (6%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C V K++ ++ L +Y ++H + + +
Sbjct: 363 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLV---ANTITYTTLIHGFCQVGDLNAAQDLL 419
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-----------GFSPDFHT 117
Q+M G P+++T N ++ GKL + M +S G PD T
Sbjct: 420 QEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQT 479
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K L A L M G P + + +++ GL + LD FD M
Sbjct: 480 YNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMG 539
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K P+VV +T +I Y AG ++ +LF M +G + N TY ++I GF G +
Sbjct: 540 SKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNIN 599
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A + +EM + G P+ + +++ L + +L A
Sbjct: 600 GALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRA 636
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ LI C G++ A+ +++ + S + P + N +L L
Sbjct: 387 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVC---PNVVTCNTLLDGLCD 443
Query: 58 IRQYKLIEWVYQQMSDE-----------GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ K +++ M G PD+ TYNI++ GK + L +EM
Sbjct: 444 NGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TYN ++H L K + A + + M F P+V+ FTTL++G +AG +
Sbjct: 504 PHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRV 563
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + + + Y +I + G + A D+F M+ G P+ T +M
Sbjct: 564 DDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNM 623
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G + A M+++++
Sbjct: 624 LTGLWSKEELKRAVAMLEDLQ 644
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 105/215 (48%), Gaps = 10/215 (4%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++ + +M R+G+LD L +M + +++ IL+ K AL+
Sbjct: 76 PSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALST 135
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ ++GF P+V+ F+TL+ GL + F +M C P+VV +T ++
Sbjct: 136 FGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 191
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFL 256
G + +A L D M+ G PN TY +++ G C G A ++++ME PN +
Sbjct: 192 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVV 251
Query: 257 VY-----NTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
++ +++ ++G+ +EA ++++ M+E+ K
Sbjct: 252 IWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKK 286
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L M PSV+ F LM + R G LD +M + + +T+++
Sbjct: 62 AIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMK 121
Query: 194 SYIAAGELEKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + +L A F G ITK G P V T+++++ G C+ + EA + +M C
Sbjct: 122 CFCSCSKLPFALSTF-GKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CK 176
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + + TL++ L G++ EA ++ M+E G
Sbjct: 177 PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDG 209
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 133/250 (53%), Gaps = 1/250 (0%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
++F +P SYN++L+AL+ ++ E + G +P++ TYNI++ R +
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D+ LL+ M GFSPD +Y L++ L K AL L + M E G P V + L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225
Query: 157 MDGLSRAGN-LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+DG + G+ L+A + + + P++ Y VMI G+ +++ +++ M
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ +++TY+++I G C +G D A + KEM G +P+ +VYNT+++ AG++ E
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 276 EVIRHMVEKG 285
E+ + M ++G
Sbjct: 346 ELWKVMEKEG 355
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 2/221 (0%)
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++Q+M + G P I +YN ++ A K D+ G SP+ TYNIL+ +
Sbjct: 100 IFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKIS 159
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + A LLN M E GF P V + TL++ L++ G + FDEM +G PDV
Sbjct: 160 CRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 219
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMK 244
CY ++I + G++ A ++++ ++ + PN+ +YN MI G C GKFDE+ +
Sbjct: 220 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ + Y+TL+ L +G L A V + M E G
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 48/315 (15%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSK----LFNFRPFKNSYNAILHALLGIRQYKLI 64
++N++I C CG+ + ++ R K++ L+ +Y+ ++H L G
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY-------TYSTLIHGLCGSGNLDGA 309
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS------------ 112
VY++M++ G +PD++ YN ++ R G++++ L M + G
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Query: 113 ----------------------PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
D TY +L+H L K AL++L + D
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
++++++GL R G LD D+M GC P+ +I ++ A +LE A F
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M++KG P V TYN++I G A +F EA ++KEM +G PN + Y+ L++ L K
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 271 LAEAHEVIRHMVEKG 285
L A + +EKG
Sbjct: 550 LDMALNLWCQALEKG 564
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 106/205 (51%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D Y+ ++ R G+LD+ +LD+M + G P+ H N +++ + K AL
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+M G P+V+ + TL++GLS+A EM +KG P+++ Y++++
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
+L+ A +L+ + KG P+V +N +I G C +GK ++A + EM+ R C PN + +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVE 283
NTL+ A ++ H+++
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQ 632
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 95/193 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+++++ L + + V QM+ G P+ N V+ R KL+ R M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN L++ L K ++ A L+ M G+ P+++ ++ LM+GL + L
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKL 550
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + + KG PDV + ++I ++G++E A L+ M + +PN+ T+N++
Sbjct: 551 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610
Query: 227 IRGFCMAGKFDEA 239
+ GF F+ A
Sbjct: 611 MEGFYKVRDFERA 623
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 90/188 (47%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P + NA+++ + + + + M +G P ++TYN ++ + + + +
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ EM G+ P+ TY++L++ L +G K ALNL E GF P V ++ GL
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+G ++ + EM + C+P++V + ++ + + E+A ++D ++ N +
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640
Query: 222 TYNSMIRG 229
+G
Sbjct: 641 YMEHTCQG 648
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+ T RT+ +LI G + + F + K P ++Y ++ L +
Sbjct: 290 MTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +MS++G P ++TYN ++ + G +D +LD M + P+ TYN
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A+ LLN M E PS++ + +L+ G + +L++ M G
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD Y+V I + G +E+A LFD + KG N Y ++I G+C GK D A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++ M + C PN YN L+ L K+ EA ++ M+ G
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMG 574
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 139/291 (47%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ N TFN ++ C G V A + +++ L P +Y +++ LG
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGL---HPDTFTYTSLI---LG 238
Query: 58 IRQYKLIEWVYQQ---MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ K ++ Y+ M +G + ++Y ++ G++++ +L +M P
Sbjct: 239 HCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPT 298
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TY +L++ L + + ALNL N MKE G +P+V +T L+DGL + +D +
Sbjct: 299 VRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM+ KG +P VV Y +I Y G ++ A ++ D M + PN TYN +I G C
Sbjct: 359 EMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKR 418
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K +A ++ +M R +P+ + YN+L+ L A+ ++ M E G
Sbjct: 419 KVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 134/291 (46%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ +LI C ++ ARK++ + L P +YNA++ G
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI---PSVVTYNALID---G 378
Query: 58 IRQYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +I+ ++ M P+ TYN ++C + K+ + LL++M SP
Sbjct: 379 YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPS 438
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN L+H K + +A LL+ M E G P ++ +D L + G ++ FD
Sbjct: 439 LITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFD 498
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+ KG + V YT +I Y G+++ A L + M+ LPN +TYN +I G C
Sbjct: 499 SVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEK 558
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K EA +++ +M + G P + Y L+ + G A +V HMV G
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 127/266 (47%), Gaps = 4/266 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C+ +V +V + F F+P YN IL +L ++ VY ++ + +
Sbjct: 132 CSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQIS 191
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN--ILLHVLGKGDKPLAAL 135
P+I T+N ++ ++G + + ++ ++G PD TY IL H KG +
Sbjct: 192 PNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEV 251
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L+ M + G + + +T L+ GL AG ++ F +M C P V YTV+I +
Sbjct: 252 FLI--MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G +A +LF+ M KG PNV TY +I G C K DEA M+ EM +G P+
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ YN L+ G + +A E++ M
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLM 395
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
F T R +N ++ + + L ++ +++ P ++NA+++ I E
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++ G PD TY ++ R +D + + M + G + +Y L+H L
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + AL L M E P+V +T L+ LS +G F+EM KGC P+V
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
YTV+I ++++A+ + M KG +P+V TYN++I G+C G D+A ++
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
MES C PN YN L+ L K+ +A ++ M+E+
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 130/292 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G + T+N LI + G+ E + + P +YN ++ L R+
Sbjct: 360 MSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRK 419
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + +P ++TYN ++ + ++ L+ +RLL M +G PD TY++
Sbjct: 420 VHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSV 479
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L K + A L + +K G + + +T L+DG + G +D + M N
Sbjct: 480 FIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDA 539
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P+ Y V+I ++++A L M+T G P V TY +I G FD A
Sbjct: 540 CLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHAL 599
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M S G P+ Y + + G L E +VI M E+G LV+
Sbjct: 600 KVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVT 651
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 139/316 (43%), Gaps = 41/316 (12%)
Query: 1 MIENGFPTTARTFNILIC-TCGE--VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N RT+N LIC C + V A ++ + ++ KL P +YN+++H
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL---SPSLITYNSLIHGQCK 451
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNI---VMCAKYRL--------------------- 93
+ + + M++ G PD TY++ +C + R+
Sbjct: 452 VNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVI 511
Query: 94 -----------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GK+D + LL+ M P+ +TYN+L+ L K K A +L+ M
Sbjct: 512 YTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+G P+V+ +T L+ + + G D F+ M + G PDV YT + +Y + G LE
Sbjct: 572 TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLE 631
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ D+ M +G LP++ TY +I G+ G A +K M GC P+ + + L+
Sbjct: 632 EVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILI 691
Query: 263 SNLRNAGKLAEAHEVI 278
NL + ++ E I
Sbjct: 692 KNLSHENRMKETRSEI 707
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SY ++H L + ++ M+++ P + TY +++ A G+ + L +EM
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEM 325
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ HTY +L+ L K +K A +L+ M E G PSV+ + L+DG + G +
Sbjct: 326 KEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMI 385
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D D M + C P+ Y +I ++ KA L + M+ + P++ TYNS+
Sbjct: 386 DDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSL 445
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G C + A ++ M G P+ Y+ + L G++ EA + + KG
Sbjct: 446 IHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 125/297 (42%), Gaps = 32/297 (10%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ +A ++ER + P +YN ++ L ++ K + +M G
Sbjct: 520 CKVGKIDVAYSLLERMLNDACL---PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVK 576
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++TY I++ + G D ++ + M G+ PD TY LH ++
Sbjct: 577 PTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDV 636
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M E G P ++ +T L+DG +R G F M + GC P + +++I +
Sbjct: 637 IAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSH 696
Query: 198 AG-----------------------------ELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
E E A LF+ M+ G +V Y ++I
Sbjct: 697 ENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIA 756
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GFC + +EA ++ M+ RG +P+ +YN+L+ G AEA ++ MVE G
Sbjct: 757 GFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENG 813
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 105/222 (47%), Gaps = 3/222 (1%)
Query: 67 VYQQMSDEG---YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V+++M+ +G + P + YN ++ + + +D+ + E+ + SP+ +T+N +++
Sbjct: 143 VFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVN 202
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K + A + + + G P +T+L+ G R +D F M KGC
Sbjct: 203 GYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQR 262
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ V YT +I AG + +A LF M P V TY +I +G+ EA +
Sbjct: 263 NEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLF 322
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ +GC PN Y L+ L K+ EA +++ M EKG
Sbjct: 323 NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 108 RSGFSPDFHTYNILLHVL------GKGDK-----------------PLAALNLLNHMKEV 144
R GF + H+Y+ +L++L G +K L +N E
Sbjct: 94 RPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEF 153
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
F P++ + T++ LS+ +D K + E+ N P++ + M+ Y G + +A
Sbjct: 154 KFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA 213
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ ++ G P+ FTY S+I G C D A + M +GC N + Y L+
Sbjct: 214 ELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273
Query: 265 LRNAGKLAEAHEVIRHMVE 283
L AG++ EA ++ M E
Sbjct: 274 LCEAGRINEALKLFADMTE 292
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L ++M G + D Y L+ + ++ A L++HMKE G PS + +L+D
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 793
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G D M G +P + Y +++ G EKA+ +F G+++ G +
Sbjct: 794 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 853
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+ +I G DE ++ ME +
Sbjct: 854 VAWKVLIDGLLKRDLVDECSELIDIMEEK 882
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%)
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+Y++ ++++M + G D+ Y ++ + +L++ L+ M G SP YN
Sbjct: 728 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYN 787
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL K A+ L++ M E G P + + L+ GL G+ + K F + +
Sbjct: 788 SLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSC 847
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
G D V + V+I + +++ +L D M K
Sbjct: 848 GYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y A++ + + + + M + G +P YN ++ +LG + RL+D M
Sbjct: 751 YGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMV 810
Query: 108 RSGFSPDFHTYNIL---LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+G P +Y +L L++ G +K A + + + G++ + + L+DGL +
Sbjct: 811 ENGLLPLLESYKLLVCGLYIEGSNEKAKA---VFHGLLSCGYNYDEVAWKVLIDGLLKRD 867
Query: 165 NLDACKYFFDEMANKG--CMPDVVCYTVM 191
+D C D M K D+ C +M
Sbjct: 868 LVDECSELIDIMEEKDATAQADIACAALM 896
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 7/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+N LI C G + A VVE KL P +YN ++
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL---SPNTRTYNELIKGYCK 440
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+K + V +M + PD++TYN ++ + R G D +RLL M G PD T
Sbjct: 441 SNVHKAM-GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K + A +L + +++ G +P+V+ +T L+DG +AG +D ++M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C+P+ + + +I A G+L++A L + M+ G P V T +I G FD
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + ++M S G P+ Y T + G+L +A +++ M E G
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENG 667
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 149/325 (45%), Gaps = 42/325 (12%)
Query: 1 MIENGFPTTARTFNIL-ICTCGEVGLARKVVE---RFIKSKLFN--FRPFKNSYNAILHA 54
+I NG+ +L I +C VG A V++ + K + F ++ YN +L++
Sbjct: 133 LINNGYVGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNS 192
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L ++ VY +M ++ P+I TYN ++ +LG +++ ++ + ++ +G PD
Sbjct: 193 LARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPD 252
Query: 115 FHTYNILL-----------------------------------HVLGKGDKPLAALNLLN 139
F TY L+ H L + A++L
Sbjct: 253 FFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFV 312
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
MK+ P+V +T L+ L + EM G P++ YTV+I S +
Sbjct: 313 KMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQC 372
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+ EKA++L M+ KG +PNV TYN++I G+C G ++A +++ MESR +PN YN
Sbjct: 373 KFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYN 432
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEK 284
L+ + + +A V+ M+E+
Sbjct: 433 ELIKGYCKSN-VHKAMGVLNKMLER 456
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 103/203 (50%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
YN ++ + R G +D+ ++ EM P+ +TYN +++ K A ++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G DP +T+L+ G + +LD+ F+EM KGC + V YT +I A ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A DLF M P V TY +I+ C + + EA ++KEME G PN Y L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+L + K +A E++ M+EKG
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKG 388
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 131/271 (48%), Gaps = 12/271 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFR---PFKNSYNAILHA 54
M+E T+N LI C G A +++ L N R P + +Y +++ +
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS------LMNDRGLVPDQWTYTSMIDS 506
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L ++ + ++ + +G P+++ Y ++ + GK+D+ H +L++M P+
Sbjct: 507 LCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPN 566
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+N L+H L K A L M ++G P+V T L+ L + G+ D F
Sbjct: 567 SLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G PD YT I +Y G L A+D+ M G P++FTY+S+I+G+ G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ + A ++K M GC P+ + +L+ +L
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 140/308 (45%), Gaps = 13/308 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+ T+N ++ C G V A + V + +++ L P +Y +++
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL---DPDFFTYTSLIMGYCQ 265
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V+ +M +G + + Y ++ ++D+ L +M P T
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ L ++ ALNL+ M+E G P++ +T L+D L + + +M
Sbjct: 326 YTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQML 385
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG MP+V+ Y +I Y G +E A D+ + M ++ PN TYN +I+G+C +
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VH 444
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
+A ++ +M R P+ + YN+L+ +G A+ ++ M ++G Y ++
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMI 504
Query: 292 SKFKRYKR 299
+ KR
Sbjct: 505 DSLCKSKR 512
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 127/282 (45%), Gaps = 8/282 (2%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P T RT+N LI C V A V+ + ++ K+ P +YN+++ +
Sbjct: 426 PNT-RTYNELIKGYCK-SNVHKAMGVLNKMLERKVL---PDVVTYNSLIDGQCRSGNFDS 480
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ M+D G PD TY ++ + + ++++ L D + + G +P+ Y L+
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K K A +L M P+ L F L+ GL G L ++M G P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
V T++I + G+ + A F M++ G P+ TY + I+ +C G+ +A MM
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M G +P+ Y++L+ + G+ A +V++ M + G
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 61/340 (17%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+N P + TFN LI C G++ A + E+ +K +P ++ ++H LL
Sbjct: 561 KNCLPNSL-TFNALIHGLCADGKLKEATLLEEKMVK---IGLQPTVSTDTILIHRLLKDG 616
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +QQM G PD TY + R G+L ++ +M +G SPD TY+
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPS------------------------------ 149
L+ G + A ++L M++ G +PS
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMS 736
Query: 150 -VLHFTTLMD----------------------GLSRAGNLDACKYFFDEMA-NKGCMPDV 185
++ F T+++ G+ GNL + FD M N+G P
Sbjct: 737 NMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSE 796
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ + +++ + +A + D MI G LP + + +I G G+ + ++ +
Sbjct: 797 LVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQN 856
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G + L + ++ + G + +E+ M + G
Sbjct: 857 LLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
CY ++ S G +++ + ++ M+ PN++TYN M+ G+C G +EA + ++
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
G +P+F Y +L+ L A +V M KG Y HL+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLI 295
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 124/318 (38%), Gaps = 58/318 (18%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T T ILI + G RF + +P ++Y + R+
Sbjct: 593 MVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY--CRE 650
Query: 61 YKLI--EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+L+ E + +M + G +PD+ TY+ ++ LG+ + +L M +G P HT+
Sbjct: 651 GRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 119 -NILLHVL------GKGDKP-LAALN----------LLNHMKEVGFDPSVLHFTTLMDGL 160
+++ H+L KG +P L A++ LL M E P+ + L+ G+
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGI 770
Query: 161 SRAGNLDACKYFFDEMA-NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
GNL + FD M N+G P + + +++ + +A + D MI G LP
Sbjct: 771 CEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQ 830
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKE---------------------------------- 245
+ + +I G G+ + ++ +
Sbjct: 831 LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFN 890
Query: 246 -MESRGCNPNFLVYNTLV 262
ME GC + Y+ L+
Sbjct: 891 VMEKNGCKFSSQTYSLLI 908
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 76/162 (46%), Gaps = 5/162 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+ A+++ LI C G + +A KV + +++ P + +NA+L
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE--GISPSELVFNALLSCCCK 808
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++++ V M G+ P + + +++C Y+ G+ ++ + + + G+ D
Sbjct: 809 LKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+ I++ +GK A L N M++ G S ++ L++G
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 148/295 (50%), Gaps = 2/295 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIR 59
M+ +G T+N +I + G+ + ++ ++ +F F P + +Y+++++ L
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNA-DKILRDAMFKGFIPDEFTYSSLINGLCNDG 370
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
V+ + ++G+ I+ YN ++ + G + Q +L+ +M G SPD TYN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++++ L K A +LN G P + F TL+DG + N+D D M +
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PDV+ Y ++ A +L+ D F M+ KG PN+ TYN +I FC K EA
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+ KEM++RG P+ + TL+ L + G+L +A+E+ + ++ K+ + + F
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIF 605
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNSYNAILHALLGI 58
++ G ++N LIC G ++ V K+ N P + +YN I++
Sbjct: 277 IVSEGLTPDVISYNTLIC--GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + + +G+ PD TY+ ++ G +++ + E GF Y
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L K L AL L+ M E G P + + +++GL + G L ++
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KGC+PD+ + +I Y ++KA ++ D M++ G P+V TYN+++ G C A K D
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K M +GC PN + YN L+ + K++EA E+ + M +G
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 37/301 (12%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G ++ V F + ++ P SYNAI++ L+ + VY +M D G PD+
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDV 146
Query: 81 LTYNIVM---------CAKYRL---------------------------GKLDQFHRLLD 104
T+ I M A RL +++ +H L D
Sbjct: 147 YTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH-LFD 205
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM + G PD T+N L+HVL K + L + + + G P++ F + GL R G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D + + ++G PDV+ Y +I + +L +A+ M+ G PN FTYN
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I GFC AG A ++++ +G P+ Y++L++ L N G + A V +EK
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385
Query: 285 G 285
G
Sbjct: 386 G 386
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TFN LI C G V + K+ + +K + P ++N + L
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC---PNLFTFNIFIQGLCR 263
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + EG PD+++YN ++C + KL + L +M SG P+ T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 118 YNILLH------VLGKGDKPL-----------------------------AALNLLNHMK 142
YN +++ ++ DK L A+ +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E GF S++ + TL+ GLS+ G + +M GC PD+ Y +++ G L
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A + + I KG +P++FT+N++I G+C D+A ++ M S G P+ + YNTL+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L A KL + + M+EKG
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKG 526
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +G PDILT+N ++ + G + + +L ++ + G P+ T+NI + L
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A LL + G P V+ + TL+ G + L + + +M N G P+
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + AG ++ A + + KG +P+ FTY+S+I G C G + A + E
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + ++YNTLV L G + +A ++++ M+E G
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+N+++ C G + A ++ I P ++N ++
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI---PDIFTFNTLIDGYCK 473
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + M G PD++TYN ++ + KLD M G +P+ T
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ K K A+ L MK G P ++ TL+ GL G LD F +
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 178 NKGCMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ + +MI ++ + A+ LF M P+ +TY MI +C G
Sbjct: 594 KEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A T + E S+G P+F +++ L +L+EA +I MV+ G
Sbjct: 654 DLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
L L F+++ E GF TY ++ LG K A ++L M++ D +L
Sbjct: 21 LNALKMFNQVKTE---DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK-NVDSKMLE 76
Query: 153 --FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ +M R G + F+ M C P V Y ++ + G +A ++
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G P+V+T+ ++ FC+ G+ A ++ M +GC N + Y ++S
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196
Query: 271 LAEAHEVIRHMVEKG---------KYIHLVSK 293
EA+ + M+++G K IH++ K
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 144/307 (46%), Gaps = 16/307 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G + TFN +I C G V A+ I S +F + + N++ L
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAK-----LIMSHIFRYDAYPNAFTYTSLILGH 247
Query: 58 IRQYKL--IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R + L ++ +M +G P+ +TY+ ++ G+L++ +L+EM + G P
Sbjct: 248 CRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTV 307
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+TY I L L A+ LL MK+ G P++ FT L+ GLSR G + + +
Sbjct: 308 YTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHK 367
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +P V Y +I G E A +F M++ G LP+ TYN +I+ FC+ G
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGD 427
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLV------SNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+A + +M G +PN + YNTL+ NL NA +L E + + Y
Sbjct: 428 IQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTE 487
Query: 290 LVSKFKR 296
L+S F R
Sbjct: 488 LISGFSR 494
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 10/279 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--L 55
M+ +G T T+N LI C G A + + + P +YN I+ L
Sbjct: 368 MLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL---PSTQTYNEIIKCFCL 424
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+G Q ++ ++ +M G +P+++TYN ++ + G L+ RLL+ M +G PD
Sbjct: 425 MGDIQKAMV--IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDA 482
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ +G K A +L M E G P+ + +T ++DG +D F +
Sbjct: 483 WTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWK 542
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +P Y VMI+ + + +A++ M+ +G LPNV TY S I G C G+
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGR 602
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A + EME R PN Y++L+ L G+ +A
Sbjct: 603 TGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 127/287 (44%), Gaps = 1/287 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G +TF LI G + + K P +YNA+++ L +
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +++ M G P TYN ++ +G + + + D+M ++G SP+ TYN
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K A+ LL MK G P +T L+ G SR G L+ F M G
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG 512
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V YT +I Y +++ A LF M+ G LP+ TYN MI GF EA
Sbjct: 513 ISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAE 572
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+M +G PN + Y + + L G+ A ++ H +EK Y
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIF-HEMEKRNY 618
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 92 RLGKLDQFHRLLD---EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+LGK D D +M SG P T+N ++++L K + A +++H+ P
Sbjct: 176 QLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP 235
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ +T+L+ G R NLD FD M GC P+ V Y+ +I + G LE+A D+
Sbjct: 236 NAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML 295
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M+ KG P V+TY + C AG EA ++ +M+ RGC PN + L+S L
Sbjct: 296 EEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 269 GKLAEAHEVIRHMVEKG 285
GK A + M+ G
Sbjct: 356 GKFEIAIGLYHKMLADG 372
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 15 ILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
++I +C G ++V + I SK ++F S+ +L L L +Y +M
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSK-YDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKML 194
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ G P +LT+N ++ + G++ + ++ + R P+ TY L+ +
Sbjct: 195 NSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLD 254
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A + + M + G DP+ + ++TL++GL G L+ +EM KG P V YT+ +
Sbjct: 255 LAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPL 314
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
S AG +A +L M +G +PN+ T+ ++I G GKF+ A + +M + G
Sbjct: 315 VSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLV 374
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
P + YN L++ L G+ A + + M+ G
Sbjct: 375 PTTVTYNALINQLCVEGRFETAFTIFKWMLSHGS 408
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G + T++ LI C+ G + A ++E ++ + P +Y L +L
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGI---EPTVYTYTIPLVSLCD 319
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M G P+I T+ ++ R GK + L +M G P T
Sbjct: 320 AGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ L + A + M G PS + ++ G++ FD+M
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V+ Y +I Y G L A L + M G P+ +TY +I GF GK +
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ M G +PN + Y ++ N K+ +A + MVE G
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESG 547
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 132/295 (44%), Gaps = 8/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+N LI C G + A +++E + L +P +Y ++
Sbjct: 438 MLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGL---KPDAWTYTELISGFSR 494
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ M + G +P+ +TY ++ + L K+D L +M SG P T
Sbjct: 495 GGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQT 554
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+++ K + A N M + G P+V+ +T+ +DGL R G F EM
Sbjct: 555 YNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEME 614
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQ--DLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ P++ Y+ +I G E A+ +L + G PNV TY ++++G C G+
Sbjct: 615 KRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGR 674
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
EA ++ M+ +G P+ +Y L+ K+ A + M G +HL
Sbjct: 675 CYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHL 729
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 111/272 (40%), Gaps = 2/272 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G T+ +I + + F K P +YN ++
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E +M +G P+++TY + R G+ ++ EM + + P+ +TY+
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSS 627
Query: 121 LLHVLGKGDKPLAA--LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L++ L + + A NLL + G +P+V +TTL+ GL G M
Sbjct: 628 LIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG P Y ++ ++E A ++F M T G ++ Y ++I C +E
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
A + + M + N + +V+ L+ L G+
Sbjct: 748 AQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGE 779
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 8/270 (2%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G +++T+N++I + A + +K L P +Y + + L
Sbjct: 543 MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL---PNVITYTSFIDGLCR 599
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD--QFHRLLDEMGRSGFSPDF 115
+ L ++ +M Y P++ TY+ ++ + G+ + + + LL + G P+
Sbjct: 600 NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNV 659
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L + A L+ M++ G PS + L+ G + +++ F
Sbjct: 660 DTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYS 719
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G + Y +I + +E+AQ +F M+ K + + ++ G G+
Sbjct: 720 MDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGE 779
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D ++ MESR C NF Y L L
Sbjct: 780 TDLCLKLLHVMESRNCTLNFQTYVMLAREL 809
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 151/290 (52%), Gaps = 11/290 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+IL+ C G+V A+ ++ +K + +YN+++ +++ + ++
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVV---TYNSLMDGYCLVKEINKAKDIF 338
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+ G ++ +Y ++ ++ +D+ L +EM P+ TYN L+ LGK
Sbjct: 339 DSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKL 398
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K L L++ M + G P+++ + +++D L + ++D + ++G PD+ Y
Sbjct: 399 GKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTY 458
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
TV+I +G+LE AQ +F+ ++ KG +V+TY MI+GFC+ G FD A ++ +ME
Sbjct: 459 TVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMED 518
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG-----KYIHLVSK 293
GC PN Y ++ +L + A +++R M+ +G YI+L SK
Sbjct: 519 NGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEKSYIYLASK 568
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ GF A TFN LI C G + A ++ + F + SY +++ L
Sbjct: 131 ILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQ---GFHLDQVSYGTLINGLCK 187
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +++ + P+ + YN+++ + ++ L +M SPD T
Sbjct: 188 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFT 247
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L++ + A+ LL+ M +P + F+ L+D + G + K
Sbjct: 248 CNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTM 307
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K + DVV Y ++ Y E+ KA+D+FD M ++G + NV +Y +MI G C D
Sbjct: 308 KKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVD 367
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + +EM R PN + YN+L+ L GK++ +++ M ++G+ ++++
Sbjct: 368 EAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIIT 422
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ LI C G + A ++++R + KL +P YN I+ +
Sbjct: 166 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKR-VDGKLV--QPNAVMYNMIIDNMCK 222
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y QM + +PD T N ++ +G+L + LL +M +P +T
Sbjct: 223 AKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYT 282
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++IL+ K K A +L + V+ + +LMDG ++ K FD MA
Sbjct: 283 FSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMA 342
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G + +V YT MI +++A +LF+ M + +PNV TYNS+I G GK
Sbjct: 343 SRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKIS 402
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM RG PN + YN+++ L + +A ++ ++ ++G
Sbjct: 403 CVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQG 450
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 119/253 (47%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +N IL +L+ + + ++QQM G D T+NI++ +LG
Sbjct: 65 NPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLS 124
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+ ++ + GF P+ T+N L+ L ALN + + GF + + TL++G
Sbjct: 125 FSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLING 184
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G + A + K P+ V Y ++I + A + A DL+ M+ K P+
Sbjct: 185 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPD 244
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
FT NS+I GFC+ G+ EA ++ +M NP ++ LV GK+ EA ++
Sbjct: 245 DFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLG 304
Query: 280 HMVEKGKYIHLVS 292
++K + +V+
Sbjct: 305 VTMKKDIILDVVT 317
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 98/217 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G +++ +I ++ + + V F + + P +YN+++ L + +
Sbjct: 341 MASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGK 400
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D G P+I+TYN ++ A + +D+ LL + G PD +TY +
Sbjct: 401 ISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTV 460
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + K A + + G++ V +T ++ G G DA +M + G
Sbjct: 461 LIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNG 520
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
C+P+ Y ++I S E + A+ L MI +G L
Sbjct: 521 CIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL 557
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 13/255 (5%)
Query: 34 IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAK 90
I S F F N ++ LG+ V+ ++ +G+ P+ +T+N + +C K
Sbjct: 101 IVSDFFTFNILINCFSQ-----LGLNSLSF--SVFGKILKKGFDPNAITFNTLIKGLCLK 153
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + FH D++ GF D +Y L++ L K + AAL LL + P+
Sbjct: 154 GHIHQALNFH---DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNA 210
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + ++D + +A ++ + +M K PD +I + G+L++A L
Sbjct: 211 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHK 270
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
MI + P ++T++ ++ FC GK EA M+ + + + YN+L+ +
Sbjct: 271 MILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKE 330
Query: 271 LAEAHEVIRHMVEKG 285
+ +A ++ M +G
Sbjct: 331 INKAKDIFDSMASRG 345
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +K P ++ + +++S + A A L M G + + FT+N +I F G
Sbjct: 61 LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ ++ ++ +G +PN + +NTL+ L G + +A +V +G ++ VS
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVS 177
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 119/221 (53%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ V+ +++ P ++++N ++ ++G LD RL M +S PD TY+ L++
Sbjct: 260 QKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINA 319
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K +K A L M E G P+ + FTTL+ G SR G +D K + +M +KG PD
Sbjct: 320 LCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPD 379
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V Y ++ + G+L A+++ DGMI +G P+ TY ++I GFC G D A + K
Sbjct: 380 IVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRK 439
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ G + + ++ L+ + G++ +A +R M+ G
Sbjct: 440 EMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAG 480
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 138/323 (42%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ GFP FNIL+ C G + A+KV + K L RP S+N +++
Sbjct: 231 ILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSL---RPTVVSFNTLINGYCK 287
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M PD+ TY+ ++ A + K+D HRL EM G P+
Sbjct: 288 VGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVI 347
Query: 118 YNILLH-----------------VLGKGDKP------------------LAALNLLNHMK 142
+ L+H +L KG +P +AA N+++ M
Sbjct: 348 FTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMI 407
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + +TTL+DG R G++D EM G D V ++ +I G +
Sbjct: 408 RRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVI 467
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A+ M+ G P+ TY M+ FC G ++KEM+S G PN + YN L+
Sbjct: 468 DAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLL 527
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L G++ A ++ M+ G
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNVG 550
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 133/282 (47%), Gaps = 2/282 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKL 63
G P + L+ T ++G V++ F S+ NF P + N +L ++ +
Sbjct: 165 GTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRKHNFVVPIRGCGN-LLDRMMKLNPTGT 223
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ Y ++ D G+ ++ +NI+M + G + ++ DE+ + P ++N L++
Sbjct: 224 VWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLIN 283
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K L +HM++ P V ++ L++ L + +D F EM +G +P
Sbjct: 284 GYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIP 343
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ V +T +I + G+++ ++ + M++KG P++ YN+++ GFC G A ++
Sbjct: 344 NDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M RG P+ + Y TL+ G + A E+ + M + G
Sbjct: 404 DGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNG 445
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGIR 59
M+ G+ T LI + G K F+K + ++P ++Y A+++
Sbjct: 320 MVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ E + +M ++G P+ TY ++ ++G + + L+D MG+ GFSP+ +TYN
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYN 439
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K A LLN + G + +T LM R + + FF++M
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV 499
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+ YT +I+++ ++++++ LF+ ++ G +P TY SMI G+C G A
Sbjct: 500 GFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M + GC P+ + Y L+S L KL +A + M++KG
Sbjct: 560 VKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 130/266 (48%), Gaps = 1/266 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
E G ++ V ++ + P + N +L +G+ ++ E ++ +M G +PD
Sbjct: 165 AENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDC 224
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+++ +++ A +G++ + R L+ M GF D T +++ + +
Sbjct: 225 VSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWK 284
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M E+G P+V++FT L++GL + G++ +EM +G P+V +T +I G
Sbjct: 285 MVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGW 344
Query: 201 LEKAQDLFDGMI-TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
EKA LF ++ + G PNV TY +MI G+C K + A ++ M+ +G PN Y
Sbjct: 345 TEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYT 404
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
TL+ G A+E++ M ++G
Sbjct: 405 TLIDGHCKVGNFVRAYELMDLMGKEG 430
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 15/301 (4%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLG 57
+G+ T+ +I C ++ A ++ R + L P N+Y ++ H +G
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV---PNTNTYTTLIDGHCKVG 414
Query: 58 --IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+R Y+L++ M EG++P+I TYN ++ + G LD+ +RLL+++ G D
Sbjct: 415 NFVRAYELMDL----MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY IL+ V + +L N M +VGF P + +TTL+ R + + F+E
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEE 530
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ G +P YT MI Y G A LF M G P+ TY ++I G C K
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
D+A + M +G +P + TL + A V+ + EK ++I V+
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL-EKRQWIRTVNTLV 649
Query: 296 R 296
R
Sbjct: 650 R 650
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 131/304 (43%), Gaps = 7/304 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E GF T ++I + G +VV F K P ++ A+++ L
Sbjct: 250 MVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGS 309
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYN 119
K + ++M G+ P++ T+ ++ + G ++ RL ++ RS G+ P+ HTY
Sbjct: 310 IKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ K DK A LL+ M+E G P+ +TTL+DG + GN D M +
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P++ Y +I G L++A L + + G + TY ++ C + +
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRS 489
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSK 293
+M G P+ Y TL+S ++ E+ + V G Y ++
Sbjct: 490 LVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICG 549
Query: 294 FKRY 297
+ RY
Sbjct: 550 YCRY 553
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 2/195 (1%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHV-LGKGDKPLAALNLLNHMKEVGFDPSVLH 152
GKL + ++ EM G P T N +L V +G G +A N+ M + G P +
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAE-NMFVEMCQRGVSPDCVS 226
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F ++ G + + + + M +G + D T++I ++ G + + F M+
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G PNV + ++I G C G +A +++EM RG PN + TL+ L G
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346
Query: 273 EAHEVIRHMVEKGKY 287
+A + +V Y
Sbjct: 347 KAFRLFLKLVRSDGY 361
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
M+ ++ G+L++A ++ M +G +P+ T N ++ G + A M EM RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + + +V N G++ EA + MVE+G
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERG 254
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 159/389 (40%), Gaps = 104/389 (26%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+C C ++G ++++ I + P + +N+++HA Y +
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCY---PSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYRL-------------------------------- 93
++M D G P + YNI++ C +L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 94 ------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
GK ++ + ++ EM GF PD TY+ ++ +L K A L MK
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P V +T L+D + G L + +FDEM GC P+VV YT +I +Y+ A ++ A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM--------------------- 246
F+ M+++G +PNV TY ++I G C +G+ ++AC + M
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 247 ---------------------ESR---------GCNPNFLVYNTLVSNLRNAGKLAEAHE 276
E+R GC PN +VY+ L+ GKL EA
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 277 VIRHMVEKG------KYIHLVSKFKRYKR 299
V M E+G Y L+ + + KR
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 16/290 (5%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ ILI + +VGL ++ + F + P +Y A++HA L R+ +++ M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH--------------- 116
EG P+++TY ++ + G++++ ++ M + PD
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636
Query: 117 -TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L K K A +LL+ M G +P+ + + L+DG + G LD + F +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ +G P+V Y+ +I L+ A + M+ PNV Y MI G C GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
DEA +M ME +GC+PN + Y ++ AGK+ + E++R M KG
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 16/263 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKV------------VERFIKSKLFNFR-PF 44
M+ G T+ LI C G++ A ++ V+ + K N R P
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A++ L + K + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M G+ P+ +TY+ L+ L K + AL +L+ M E P+V+ +T ++DGL + G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D M KGC P+VV YT MI + AG+++K +L M KG PN TY
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 225 SMIRGFCMAGKFDEACTMMKEME 247
+I C AG D+A ++ EM+
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMK 838
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P LTYN ++ +LD + + EM SGF+ D +T +H+L K
Sbjct: 222 RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG 281
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AL L+ +E D + +T ++ GL A + F M + C+P+VV Y
Sbjct: 282 RWREALALIEK-EEFKLDTVI--YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + +L + + + MIT+G P+ +NS+I +C +G + A ++K+M
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 250 GCNPNFLVYNTLVSNLRNAGKL 271
GC P ++VYN L+ + KL
Sbjct: 399 GCQPGYVVYNILIGGICGNEKL 420
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 129/282 (45%), Gaps = 10/282 (3%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G+ T++ LI + LA KV+ R +++ + P Y ++ L
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN---SCAPNVIIYTEMIDGLCK 753
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M ++G P+++TY ++ + GK+D+ L+ +MG G +P+F T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L++ A LL+ MK+ + + + +++G +R + DE+A
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL--GLLDEIA 871
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM--ITKGQLPNVFTYNSMIRGFCMAGK 235
+P + Y ++I S+ AG LE A +L M T + Y+S+I +A K
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASK 931
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
D+A + +M RG P ++ LV L + EA ++
Sbjct: 932 VDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQL 973
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 11/191 (5%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+QM +G AP+ +TY +++ G LD H+LLDEM ++ + Y ++ G
Sbjct: 800 RQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE--GFN 857
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN--KGCMPDVV 186
+ + +L LL+ + E P + + L+D +AG L+ EM++ D
Sbjct: 858 REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKD 917
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA------- 239
Y+ +I S A +++KA +L+ MI +G +P + + +++G +++EA
Sbjct: 918 LYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEALQLSDCI 977
Query: 240 CTMMKEMESRG 250
C MM + G
Sbjct: 978 CQMMVDFVREG 988
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L +K++G+ PS L + L+ A LD EM++ G D +
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVH 275
Query: 194 SYIAAGELEKAQDLFDGMITKGQLP-NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
AG +A +I K + + Y MI G C A F+EA + M S C
Sbjct: 276 LLCKAGRWREAL----ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI 331
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
PN + Y L+ +L ++ M+ +G Y
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY 366
>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
Length = 814
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ A ++ +M D G PD++TY V+ A R+GK+D ++M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM 455
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +PD + Y+ L+ L A L++ + G ++ F+++++ L + G +
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRV 515
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FD N G P V Y++++ Y G++EKA +FD M++ G PN Y ++
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C G+ DE ++ +EM +G P+ ++YN ++ L AG+ A M E G
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 634
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 111/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G PD +TY+ V+ A + +D+ L +M G P+ TYN L++
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ + M+ P V+ + LM L + G + + FD MA KG P+V
Sbjct: 301 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF 360
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT+M+ Y G L DLFD M+ G P+++T+N +I+ + G D+A + EM
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y T+++ L GK+ +A E M+++G
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 122/245 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y++++HAL R E +QM ++G P+ TYN ++ G+ + R+ EM
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R PD T ++L+ L K K A ++ + M G +P+V +T +++G + G L
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCL 375
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
FD M G PD+ + V+I +Y G L+KA +F+ M G P+V TY ++
Sbjct: 376 VDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTV 435
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C GK D+A +M +G P+ Y+ L+ G L +A E+I ++ G
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495
Query: 287 YIHLV 291
++ +V
Sbjct: 496 HLDIV 500
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T++ ++ C + A + + + + P +YN +++
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL---PNNWTYNNLIYGYSS 301
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+K V+++M PD++T +++M + + GK+ + + D M G +P+ +
Sbjct: 302 TGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFS 361
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I+L+ + +L + M G P + F L+ + G LD F+EM
Sbjct: 362 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PDVV Y +I + G+++ A + F+ MI +G P+ + Y+ +I+GFC G
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ E+ + G + + + ++++++NL G++ +A + V G
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVG 529
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M +G APDI T+N+++ A G LD+ + +EM G PD TY ++ L
Sbjct: 381 LFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALC 440
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ K A+ N M + G P + L+ G G+L K E+ N G D+V
Sbjct: 441 RIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
++ +I + G + AQ++FD + G P Y+ ++ G+C+ GK ++A + M
Sbjct: 501 FFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAM 560
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S G PN +VY TLV+ G++ E + R M++KG
Sbjct: 561 VSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 9/290 (3%)
Query: 4 NGF-PTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
NGF AR + C G V L + R ++ + P ++Y ++
Sbjct: 68 NGFLAALARAPSSAACRSGPALAVALFNRAASRAQGPRVLS--PTSHTYAILMDCCTRAH 125
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-FHRLLDEMGRSGFSPDFHTY 118
+ +L + Q+ G +I+ N ++ + D+ LL G PD +Y
Sbjct: 126 RPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ILL L K A +LL M E G P V+ ++T++DG + G+++ F EM
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEM 245
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD V Y+ ++ + A ++KA+ M+ KG LPN +TYN++I G+ G++
Sbjct: 246 VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQW 305
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + KEM P+ + + L+ +L GK+ EA +V M KG+
Sbjct: 306 KEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TFN+LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 385 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGK 444
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G APD Y+ ++ G L + L+ E+ +G D ++
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSS 504
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P+ + ++ LMDG G ++ FD M + G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y ++ Y G +++ LF M+ KG P+ YN +I G AG+ A
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G N YN ++ L
Sbjct: 625 VKFHEMTESGIAMNKCTYNIVLRGL 649
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A+ + + + L P Y+ ++ + + + V+ M G
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGL---HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ + Y ++ ++G++D+ L EM + G P YNI++ L + + + A
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M E G + + ++ GL + D + F E+ +++ MI
Sbjct: 626 KFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMF 685
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+E+A+DLF + G +P V TY+ MI G +EA M M++ GC P+
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ N +V L ++ A + + E+
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDER 773
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 127/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G ++ LI CT G + A++++ + + + F +++I++ L
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF---FSSIINNLCK 511
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ + G P + Y+++M +GK+++ R+ D M +G P+
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ K + L+L M + G PS + + ++DGL AG K F EM
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + Y +++ ++A LF + N+ T N+MI G + +
Sbjct: 632 ESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVE 691
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + G P + Y+ +++NL G + EA ++ M G
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 122/272 (44%), Gaps = 6/272 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TA +++L+ C G++ A +V + + + + P Y +++ I +
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI---EPNDVVYGTLVNGYCKIGRI 585
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M +G P + YNI++ + G+ EM SG + + TYNI+
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIV 645
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L K A+ L ++ + +++ T++ G+ + ++ K F ++ G
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P VV Y++MIT+ I G +E+A+D+F M G P+ N ++R + A
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ +++ R + L LV + G E
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 129/256 (50%), Gaps = 2/256 (0%)
Query: 32 RFI-KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
RF+ + K+ P SYN ++ + + + +M +G PD ++Y VM
Sbjct: 288 RFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFL 347
Query: 91 YRLGKLDQFHRLLDEMGR-SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+ K+++ RL++ M + S PD TYN L++ L K AL L +E GF
Sbjct: 348 CKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHID 407
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ ++ ++D + N+D K +M +KGC PDVV YT +I + G++++A+ +
Sbjct: 408 KVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQ 467
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M G PN TY ++ G C GK EA M+ E PN + Y+ ++ LR G
Sbjct: 468 QMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREG 527
Query: 270 KLAEAHEVIRHMVEKG 285
KL+EA ++ R M+EKG
Sbjct: 528 KLSEACDLTREMIEKG 543
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 134/274 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI + G A + +++ F K Y+A++ + + + + M
Sbjct: 375 TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G PD++TY ++ R+GK+D+ ++L +M + G P+ TY +LL+ L K
Sbjct: 435 YSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKS 494
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L A ++N +E + P+ + ++ +M GL R G L EM KG +P+ V ++
Sbjct: 495 LEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLL 554
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I S + A+ + + KG NV + S+I GFC G D A +M+++M
Sbjct: 555 IQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNK 614
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + Y TL L +L EA E+I M+ KG
Sbjct: 615 HPDAITYTTLFDALGKKSRLDEASELIVKMLGKG 648
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 1/251 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P K SY ++ L R+ + ++ + + M + PD +TYN ++ A + G D
Sbjct: 335 PDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALV 394
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L E GF D Y+ ++ K A +L+ M G +P V+ +T ++DG
Sbjct: 395 FLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFC 454
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G +D K +M GC P+ V YTV++ G+ +A+++ + PN
Sbjct: 455 RVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAI 514
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY++++ G GK EAC + +EM +G PN + N L+ +L + A + +
Sbjct: 515 TYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEEC 574
Query: 282 VEKGKYIHLVS 292
+ KG +++V+
Sbjct: 575 LHKGCAVNVVN 585
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 107/245 (43%), Gaps = 38/245 (15%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P+ +Y VM + R G L R+L M ++G PD N ++VL KG+K AL
Sbjct: 231 SPEAFSY--VMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALR 288
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L MK G +P ++ + L+ G +D EM KGC PD V Y ++
Sbjct: 289 FLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLC 348
Query: 197 AAGELEKAQDLFDGMITKGQL-PNVFTYNSMI---------------------------- 227
++E+ + L + M+ L P+ TYN++I
Sbjct: 349 KDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDK 408
Query: 228 -------RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
FC D+A +++ +M S+GCNP+ + Y ++ GK+ EA ++++
Sbjct: 409 VGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQ 468
Query: 281 MVEKG 285
M + G
Sbjct: 469 MYKHG 473
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ D Y +L +L K A +L M G + S F+ +M SRAG L
Sbjct: 193 YRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNAL 252
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M G PD+ I + +LEKA + M G P++ +YN +I+G+
Sbjct: 253 RILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGY 312
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
C + D+A ++ EM +GC P+ + Y T+++ L K+ E ++ +MV+ I
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLI 370
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 97/257 (37%), Gaps = 40/257 (15%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A+K++++ K +P +Y +L+ L + + + +
Sbjct: 454 CRVGKIDEAKKMLQQMYK---HGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWT 510
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL----- 132
P+ +TY+ VM R GKL + L EM GF P+ N+L+ L + +
Sbjct: 511 PNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKY 570
Query: 133 ------------------------------AALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
AAL++L M P + +TTL D L +
Sbjct: 571 LEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGK 630
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
LD +M KG P V Y +I + G ++ L + MI + V
Sbjct: 631 KSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTV-- 688
Query: 223 YNSMIRGFCMAGKFDEA 239
YN +I C G +EA
Sbjct: 689 YNQVIEKLCYFGNREEA 705
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 144/285 (50%), Gaps = 1/285 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+E G T++ LI ++ + ++ K R +Y+ ++ LL + +
Sbjct: 535 LERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRM 594
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V +QM D G PD +TYN ++ ++ +L + LL EM +GF P TY L
Sbjct: 595 EDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTL 654
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA-NKG 180
H L + + A+ +L++M G P+ + +++++DGL +AG + +F++MA ++
Sbjct: 655 CHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 714
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P V+ Y+ +I AG +++A + + MI G++P+V T++ +I G C AG+ D
Sbjct: 715 VAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 774
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M RGC + YN +++ G+ + A+ ++ M G
Sbjct: 775 ELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG 819
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 147/316 (46%), Gaps = 35/316 (11%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I+ GF T T++ +I C EV K++E P +YN +++ALLG
Sbjct: 28 IQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGR---GCAPNAVTYNTLVNALLGQ 84
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K + ++M+ G P+++T+ +++ + G+++ R++DEM GF PD +
Sbjct: 85 GRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIH 144
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+LLH L + + A + +GF P + + T++DGL +AG L+A +A
Sbjct: 145 TVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAE 204
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
P V +T+ + AG L A + FD M G PN TY+++I G C AGK D
Sbjct: 205 SFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDI 264
Query: 239 ACTMMKEMESRG-----------------------------CNPNFLVYNTLVSNLRNAG 269
A ++++ S+ C PN + +N+L++ L A
Sbjct: 265 ALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQAR 324
Query: 270 KLAEAHEVIRHMVEKG 285
++ EA E+ M E G
Sbjct: 325 RVDEAFELFDVMKESG 340
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 120/233 (51%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +YN ++ L + + + M + G +PD++T+N V+ + ++ H
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ G P+ TY+ L+ L K K AL LL M E+G + + ++T++DGL
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G ++ +M + GC+PD V Y +I + L +A L M+ G P+V
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
TY ++ G C +G+FDEA ++ M +RGC PN + Y+++V L AG++ EA
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 702
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 26/298 (8%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ LI C G V A +V ER + + P + +Y +L L + +E +
Sbjct: 383 TFSTLIQGLCNAGRVNQAWEVYERMVAVE--GISPNRFTYAFLLEGLCKAGDSRRLEQCF 440
Query: 69 QQMSDEGYA---------------------PDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+QM + + P ++TYN ++ + G + LL+ M
Sbjct: 441 EQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMI 500
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG SPD T+N +L L K + L A N+ E G P+V+ ++TL+DGLS+ +D
Sbjct: 501 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 560
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+M GC + V Y+ ++ + G +E A + M G LP+ TYN++I
Sbjct: 561 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 620
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GF + EA +++EM G +P+ + Y TL L +G+ EA E++ +M +G
Sbjct: 621 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 146/304 (48%), Gaps = 5/304 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T++ ++ +VG V + + P +YN ++ ++
Sbjct: 569 MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 628
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M + G+ P ++TY + R G+ D+ +LD M G +P+ TY+
Sbjct: 629 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688
Query: 121 LLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K + AL M ++ P V+ ++ L+DGL +AG +D F + M
Sbjct: 689 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +PDVV ++++I AG ++ +LF GM +G +++ YN+MI +C+ G+F A
Sbjct: 749 GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA----HEVIRHMVEKGKYIHLVSKFK 295
+++EM++ G N + + ++ L ++ EA H + ++ Y L++
Sbjct: 809 YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLV 868
Query: 296 RYKR 299
+R
Sbjct: 869 ASRR 872
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 148/321 (46%), Gaps = 48/321 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG P TF ++I C GE+ A +VV+ + F P + +LHAL
Sbjct: 97 MAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDR---GFVPDVEIHTVLLHALCE 153
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL-------------- 103
+ + + +QQ+ G+ PD +TYN ++ Y+ G+L+ +L
Sbjct: 154 LGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFT 213
Query: 104 ---------------------DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
D M ++G SP+ TY+ L+ L K K AL LL +
Sbjct: 214 FTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL---R 270
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ + F++L+ GL +A L+ M C+P+VVC+ ++ A ++
Sbjct: 271 DKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVD 327
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM-ESRGCNPNFLVYNTL 261
+A +LFD M G +V TYN +++G C + EA ++ M + GC+PN + ++TL
Sbjct: 328 EAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTL 387
Query: 262 VSNLRNAGKLAEAHEVIRHMV 282
+ L NAG++ +A EV MV
Sbjct: 388 IQGLCNAGRVNQAWEVYERMV 408
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 123/268 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N+LI + G F K+ F FRP +Y+ ++ L + + ++M
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G AP+ +TYN ++ A G+ + LL+ M +G P+ T+ +++ L K +
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AA +++ M + GF P V T L+ L G +D +FF ++ G PD V Y M
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ AG LE A + + P VFT+ + G AG A M G
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+PN + Y+ L+ L AGKL A ++R
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLR 270
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 147/296 (49%), Gaps = 8/296 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARK---VVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ PT T+N L+ + G+ R ++E I+S L P ++N++L L
Sbjct: 465 MVQVCRPTLV-TYNTLVTGLSKSGMVRDALGLLEFMIESGL---SPDVITFNSVLDGLCK 520
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ V+++ + G P+++TY+ ++ ++ K+D+ +LL +M G + T
Sbjct: 521 EQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVT 580
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ ++ L K + A+ +L M++ G P + + TL+DG + L EM
Sbjct: 581 YSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 640
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P VV YT + +G ++A ++ D M +G PN TY+S++ G C AG+
Sbjct: 641 EAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVT 700
Query: 238 EACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++M P+ + Y+ L+ L AG++ EA+E + M+ G+ +V+
Sbjct: 701 EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVT 756
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 146/317 (46%), Gaps = 27/317 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T+NIL+ C + A + VE +++ P +++ ++ L
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTE--GCSPNVVTFSTLIQGLCN 393
Query: 58 IRQYKLIEWVYQQM-SDEGYAPDILTYNIVM---CAKYRLGKLDQ-FHRLLDEMGRSGFS 112
+ VY++M + EG +P+ TY ++ C +L+Q F ++L+ RS S
Sbjct: 394 AGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSS 453
Query: 113 -----------------PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
P TYN L+ L K AL LL M E G P V+ F +
Sbjct: 454 WPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNS 513
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++DGL + + F +GC P+VV Y+ +I ++++A L M+ G
Sbjct: 514 VLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 573
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
N TY++++ G G+ ++A ++++M GC P+ + YNTL+ +L EA
Sbjct: 574 CRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAV 633
Query: 276 EVIRHMVEKGKYIHLVS 292
++R M+E G + +V+
Sbjct: 634 GLLREMLEAGFHPSVVT 650
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 25/294 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKV----VERFIKSKLFNFRPFKNSYNAILH 53
MI G TF+ILI C G + ++ ER K+ ++ +YNA+++
Sbjct: 745 MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIY-------AYNAMIN 797
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSG 110
A ++ + ++M G A + +T+ IV +C R+ + + + E R
Sbjct: 798 AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCR-- 855
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
D +YN L+ L + AL LL M G P ++ T+MDGL +AG+ +
Sbjct: 856 ---DEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAA 912
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
EM ++G PD+ YT+MI+ A +L A D F+ M+ K P+ Y+S+I F
Sbjct: 913 KLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAF 972
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
C A K D+A +++ S G P +Y+T+V +L +A EVIR M K
Sbjct: 973 CKADKVDDAWKLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK 1023
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +++ L + +++ G+ P ++TY+ V+ R ++D+ +LL+EM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P+ TYN L++ L + A +LL M G P ++ F ++ GL + G +
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+A DEM ++G +PDV +TV++ + G +++A F ++ G P+ TYN+M
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G AG+ + A +++ + +P + V L AG L A+E M + G
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTG 241
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 139/321 (43%), Gaps = 40/321 (12%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E GF + T+ L +C G A ++++ ++ ++ P +Y++I+ L
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILD-YMAAR--GCAPNAITYSSIVDGLCK 695
Query: 58 I-RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R + + + + DE AP ++ Y+ ++ + G++D+ + L+ M R+G PD
Sbjct: 696 AGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVV 755
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T++IL++ L + L L M E G + + +++ G A +EM
Sbjct: 756 TFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815
Query: 177 ANKG-----------------------------CMP----DVVCYTVMITSYIAAGELEK 203
G +P D + Y +ITS +A+ E+
Sbjct: 816 KTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQ 875
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A +L M+ G P+ Y +++ G AG + A +++EM SRG +P+ Y ++S
Sbjct: 876 ALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMIS 935
Query: 264 NLRNAGKLAEAHEVIRHMVEK 284
L A +L A + M+ K
Sbjct: 936 GLSKAKQLPLACDYFEEMLRK 956
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 93/201 (46%), Gaps = 3/201 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN ++ +L+ R+ + + + M +G +PD Y VM ++ G + +LL EM
Sbjct: 859 SYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEM 918
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SPD TY I++ L K + A + M P + +++L+D +A +
Sbjct: 919 RSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKV 978
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + + + G P + Y+ M+ S +KA ++ M +K P + + S+
Sbjct: 979 DDA---WKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSL 1035
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G+ DEA ++ +++
Sbjct: 1036 ATAYVAEGRVDEAVKLVNDLQ 1056
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 56/108 (51%)
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V Y V+I AG + A F I G P V TY+++I G C + D+ C +++
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM RGC PN + YNTLV+ L G+ EA ++ M G L++
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELIT 108
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 138/276 (50%), Gaps = 12/276 (4%)
Query: 17 ICTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+C G LA RK+ ER IK+ + Y+ ++ +L ++ +M
Sbjct: 219 MCKSGNTALALDLFRKMEERSIKASVVQ-------YSIVIDSLCKDGNLDDALSLFNEME 271
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+G D++ Y+ ++ G+ D ++L EM P+ T++ L+ V K K L
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A L N M G P + +++L+DG + L D M +KGC P++V Y+++I
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
SY A ++ LF + +KG + + TYN++++GFC +GK + A + +EM SRG
Sbjct: 392 NSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVP 451
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
P+ + Y L+ L + G+L +A E+ M +K + I
Sbjct: 452 PSVVTYGILLDGLCDNGELQKALEIFEKM-QKSRMI 486
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 129/251 (51%), Gaps = 10/251 (3%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVM---CAKYRLG 94
N P +++A++ +++ KL+E +Y +M G APD +TY+ ++ C + RLG
Sbjct: 309 NIIPNVVTFSALIDVF--VKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLG 366
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+ +Q +LD M G P+ TY+IL++ K + + L + G + +
Sbjct: 367 EANQ---MLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
TL+ G ++G L+ K F EM ++G P VV Y +++ GEL+KA ++F+ M
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKS 483
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ + YN +I G C A K D+A ++ + +G P+ L YN ++ L G L+EA
Sbjct: 484 RMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543
Query: 275 HEVIRHMVEKG 285
+ R M E G
Sbjct: 544 DMLFRKMKEDG 554
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 14/306 (4%)
Query: 4 NGFPTTARTFNILI-CTCGEVGL--ARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
NG T NI+I C C + L A VV R +K F F P +++ +++ L R
Sbjct: 98 NGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALK---FGFEPNTITFSTLINGFCLEGR 154
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + V +M + Y P+++T N ++ G++ + L+D M + G + TY
Sbjct: 155 VSEAVALV-DRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L+ + K AL+L M+E SV+ ++ ++D L + GNLD F+EM K
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G DVV Y+ +I G + + MI + +PNV T++++I F GK EA
Sbjct: 274 GIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEA 333
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSK 293
+ EM +RG P+ + Y++L+ +L EA++++ MV KG Y L++
Sbjct: 334 KELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393
Query: 294 FKRYKR 299
+ + KR
Sbjct: 394 YCKAKR 399
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 2/238 (0%)
Query: 57 GIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
GI K+ E + ++ M P ++ ++ + A R + D EM +G +
Sbjct: 44 GIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHN 103
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+T NI+++ + K L A +++ + GF+P+ + F+TL++G G + D
Sbjct: 104 MYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVD 163
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M P+VV +I G + +A L D M+ G N TY ++ C +G
Sbjct: 164 RMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSG 223
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + ++ME R + + Y+ ++ +L G L +A + M KG +V+
Sbjct: 224 NTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVA 281
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 78/169 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ + + + ++Q+M G P ++TY I++ G+L + + ++M
Sbjct: 421 TYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKM 480
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+S YNI++H + K A +L + G P VL + ++ GL + G+L
Sbjct: 481 QKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSL 540
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
F +M GC P Y ++I +++ + + +L + M +G
Sbjct: 541 SEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRG 589
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 41/177 (23%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P + T+ IL+ C GE+ A ++ E+ KS++ YN I+H +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGI---YNIIIHGMCN 501
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHR------------- 101
+ ++ +S +G PD+LTYN++ +C K L + D R
Sbjct: 502 ASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCT 561
Query: 102 -------------------LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
L++EM GF+ D T +++ +L G L++L+
Sbjct: 562 YNILIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSDGRLDKTFLDMLS 618
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 121/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+G PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 187 ANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 246
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 247 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLI 306
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 307 DGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREMLSVG 364
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+E+ G+ + +NIL+H K A ++ + + + G PSV+ + TLM+G R
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G+LD M G PDV Y+V+I +++ A +LFD M+ KG +PN T+
Sbjct: 173 GDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 232
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++I G C G+ D A + K M S+ P+ + YNTL+ L G L +AH++I M
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSM 292
Query: 284 KG 285
KG
Sbjct: 293 KG 294
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 41/301 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 171
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM----------- 106
+ + M G PD+ TY++++ + K+D + L DEM
Sbjct: 172 LGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 231
Query: 107 -----------GRSGFS-------------PDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GR + PD TYN L++ L K A +L++ M
Sbjct: 232 FTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMS 291
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P +TTL+DG + G+LD M + D V YT +I+ G+
Sbjct: 292 MKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSV 351
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A+ + M++ G P++ TY +I FC G + ++KEM+ G P+ + YN L+
Sbjct: 352 DAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLM 411
Query: 263 S 263
+
Sbjct: 412 N 412
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ NG T+++LI C ++ A ++ + + L P ++ ++
Sbjct: 185 MLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLI---PNGVTFTTLIDGHCK 241
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y++M + PD++TYN ++ + G L Q H L+DEM G PD T
Sbjct: 242 NGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKFT 301
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A M + + +T L+ GL + G + EM
Sbjct: 302 YTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREML 361
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ G PD+ YT++I + G++ K L M G P+V TYN ++ G
Sbjct: 362 SVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G+ S+ F LM + G++ + FD + G P VV Y ++ YI G+L+
Sbjct: 117 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M+ G P+V+TY+ +I G C K D+A + EM +G PN + + TL+
Sbjct: 177 EGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 236
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ A E+ + M+ + L++
Sbjct: 237 DGHCKNGRVDLAMEIYKRMLSQSLLPDLIT 266
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F++E+ G + + +++ + G++ AQ +FD + G P+V +YN+++ G+
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L K+ +A+E+ M+ KG
Sbjct: 171 RLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 224
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 123/235 (52%), Gaps = 1/235 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y + + L + + V+ +M + G APD ++YN+++ + + ++ + L+D+
Sbjct: 263 YTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAM 322
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNL 166
P +L+ L K + A +L M E G PSV+ ++ ++DGL +A L
Sbjct: 323 ERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRL 382
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D +M GC+PDVV YT +I ++ G L++A++LF M +G +V YN +
Sbjct: 383 DDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNIL 442
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
IRG+C A K DEA M++EM RG PN + +T+V L ++ EA ++ M
Sbjct: 443 IRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 108/202 (53%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ PD TY ++ + ++ Q LL EM +G +P T+ L+ L + + AL
Sbjct: 48 FRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKAL 107
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+ + M ++ P +T ++ L + LD +F+ M GC+PD V YTV++ S
Sbjct: 108 QIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL 167
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A + E+ +F+ M++KG P + TY +++ G+C AG+ D+A ++M+ ++ G +P+
Sbjct: 168 FKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSG 227
Query: 256 LVYNTLVSNLRNAGKLAEAHEV 277
+Y+TL+ L + EA E+
Sbjct: 228 SLYSTLIDGLCKHDRHDEAREL 249
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 9/296 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ ++ C G + A ++ R K P + Y+ ++ L
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRL---KGTGRSPSGSLYSTLIDGLCK 239
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +++ + G D++ Y + + GKLD+ + +M +G +PD +
Sbjct: 240 HDRHDEARELFEMAA--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS 297
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN++++ L K ++ A L++ E P V T L+DGL ++ ++ + M
Sbjct: 298 YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERML 357
Query: 178 NKGC-MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P VV Y+ +I A L+ A + M G +P+V TY ++I FC G+
Sbjct: 358 ETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRL 417
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEA + + M RGC + + YN L+ A K+ EA +I M +G ++VS
Sbjct: 418 DEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVS 473
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 2/281 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T N L+ G R+ F + FRP +Y ++ Q
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M G P I+T+ ++ L D+ ++ +M PD Y +++
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K +K A + M + G P + +T L+ L +A + F+EM +KG P+
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V Y ++ Y AG +++A L + G+ P+ Y+++I G C + DEA +
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF- 250
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + G + +VY + +S L AGKL EA V M+E G
Sbjct: 251 EMAA-GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAG 290
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
F PD TY L+ K ++ A+NLL MK G P+++ F +L+ L D
Sbjct: 48 FRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKAL 107
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F +M + PD YTV+I +L+ A F+ M+ G LP+ TY ++
Sbjct: 108 QIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL 167
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A K+++ + +EM S+G +P + Y T+V+ AG++ +A ++R + G+
Sbjct: 168 FKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 223
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 74/186 (39%)
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R GF + +T N LL V A + F P + TL+ G +A +
Sbjct: 9 ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
EM G P +V + +I +KA +F MI P+ F Y +
Sbjct: 69 PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C K D A + + M GC P+ + Y LV +L A K + H++ M+ KG
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188
Query: 287 YIHLVS 292
LV+
Sbjct: 189 SPELVT 194
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y AI+ A + + ++Q+M + G A D++ YNI++ R K+D+ +
Sbjct: 399 PDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAM 458
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
++EM G P+ + + ++ L K + A L+ M
Sbjct: 459 IEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARLLMEKM 497
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 141/289 (48%), Gaps = 10/289 (3%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+GF TFN L C G + A ++++ + L + + N ILH L G
Sbjct: 249 MEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGL---KMNSVTLNTILHTLCG 305
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + S GY D ++Y ++ +++GK + DEM P T
Sbjct: 306 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXW----DEMKEKEIIPSIIT 361
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L + K +++ N + E G P + T++ G R G +D +F ++M
Sbjct: 362 YGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMV 421
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD+ +++ G L+KA LF I+KG+ + T+N++I G C G+F+
Sbjct: 422 KKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFE 481
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA ++ EME + P+ +N ++S L +AG++ EA E + +VE+GK
Sbjct: 482 EAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGK 530
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 138/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G TFNILIC C + + K K F+ P SYN IL L +
Sbjct: 39 VIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGK 98
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M + G P+ T+NI++ +LG L + ++D M R+ PD TY
Sbjct: 99 LNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTT 158
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A L + M+ + P V+ + L++G + DEM KG
Sbjct: 159 LIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKG 218
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y V++ Y+ G+++ A + M G P+ T+N++ G+C AG+ EA
Sbjct: 219 VKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAF 278
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
MM EM +G N + NT++ L KL +A++++ ++G ++ VS
Sbjct: 279 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 135/281 (48%), Gaps = 4/281 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N+LI C E + K E + + +P +YN ++ + + ++M
Sbjct: 190 TYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 249
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G++PD +T+N + + G+L + R++DEM R G + T N +LH L K
Sbjct: 250 EESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 309
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A LL+ + G+ + + TL+ G + G +DEM K +P ++ Y M
Sbjct: 310 DDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTM 365
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I +G+ +++ D + ++ G +P+ TYN++I G+C G+ D+A +M +
Sbjct: 366 IGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSF 425
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ N LV L G L +A ++ + + KGK I V+
Sbjct: 426 KPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVT 466
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 137/347 (39%), Gaps = 71/347 (20%)
Query: 6 FPTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
FP IL +C G++ AR ++ + LF P +N++N ++ + K
Sbjct: 80 FPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLF---PNRNTFNILVSGYCKLGWLKE 136
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V M+ PD+ TY ++ + GK+D+ RL DEM P TYN+L++
Sbjct: 137 AAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLIN 196
Query: 124 -----------------VLGKGDKPLA------------------ALNLLNHMKEVGFDP 148
+ GKG KP A A N L M+E GF P
Sbjct: 197 GCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSP 256
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL- 207
+ F TL +G +AG L DEM+ KG + V ++ + +L+ A L
Sbjct: 257 DCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLL 316
Query: 208 ------------------------------FDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+D M K +P++ TY +MI G C +GK D
Sbjct: 317 SSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTD 376
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ E+ G P+ YNT++ G++ +A MV+K
Sbjct: 377 QSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKK 423
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 113/252 (44%), Gaps = 3/252 (1%)
Query: 37 KLFNFRPFKNSYNAILHALL---GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
K + +P + N ++ AL+ L + ++ + G + T+NI++C
Sbjct: 2 KRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIE 61
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
KL + L+ +M PD +YN +L VL K K A +LL MK G P+ F
Sbjct: 62 NKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTF 121
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L+ G + G L D MA +PDV YT +I G++++A L D M
Sbjct: 122 NILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMEN 181
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
LP+V TYN +I G + ++ EME +G PN + YN +V GK+
Sbjct: 182 LKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDN 241
Query: 274 AHEVIRHMVEKG 285
A +R M E G
Sbjct: 242 AGNELRKMEESG 253
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 90/234 (38%), Gaps = 15/234 (6%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+ + ++S L P + +YN I+ Q +M + +
Sbjct: 369 LCRSGKTDQSIDKCNELLESGLV---PDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSF 425
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD+ T NI++ G LD+ +L G + D T+N ++ L + + A +
Sbjct: 426 KPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFD 485
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL M+E P ++ L+ AG + + F + +G + D
Sbjct: 486 LLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQTI--------- 536
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
L K + ++ PN ++ I C GK+ +A M++E +G
Sbjct: 537 ---SLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKG 587
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 147/287 (51%), Gaps = 5/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G A T+N LI E+ A ++E I + P ++N+++H L
Sbjct: 279 MLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETM-VEPNVVTFNSVIHGLCK 337
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V M++ G A +++T+N+++ R+ K+ + L+DEM SG PD T
Sbjct: 338 TGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFT 397
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL++ K + A +LL+ M+ G +P ++H+ L+ L G ++ + FFDEM
Sbjct: 398 YSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM- 456
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C DVV Y+ MI + + A++ M+ +G +P+ TY+ +I F +G
Sbjct: 457 HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLG 516
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A ++K+M + G P+ V+++L+ G + E+IR M K
Sbjct: 517 AAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 125/242 (51%), Gaps = 12/242 (4%)
Query: 47 SYNAILHALLGIRQYKLIE---WVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFH 100
SYN +L AL RQ ++ ++ + M+ E P ++Y +M CA+ R G Q
Sbjct: 80 SYNTVLAAL--CRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTG---QAV 133
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL +M SG PD TY L+ L A+ LL M E G +P+V+ ++ L+ G
Sbjct: 134 GLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGY 193
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+AG + F+EM+ +G PDVV YT +I S G+++KA + D M+ +G PNV
Sbjct: 194 CKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN +I C G EA ++ M +G + + YNTL++ L ++ EA ++
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313
Query: 281 MV 282
M+
Sbjct: 314 MI 315
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 120/253 (47%), Gaps = 2/253 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP SY ++ AL R+ + + M G PD++TY ++ +D+
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL EM SG P+ Y+ LL K + + M G +P V+ +T L+D L
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G + D+M +G P+VV Y V+I S G +++A L + M+ KG +
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAV 289
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEM--ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYN++I G + DEA +++EM PN + +N+++ L G++ +A +V
Sbjct: 290 TYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRD 349
Query: 280 HMVEKGKYIHLVS 292
M E G +LV+
Sbjct: 350 MMAENGCACNLVT 362
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 135/296 (45%), Gaps = 8/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+ LI C +V A +++ +S P Y+ +L
Sbjct: 139 MQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCES---GIEPNVVVYSCLLQGYCK 195
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + V+++MS G PD++ Y ++ + R GK+ + +++D+M G P+ T
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L++ + K A++L N+M E G + + TL+ GLS +D +EM
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315
Query: 178 NKGCM--PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ M P+VV + +I G + +A + D M G N+ T+N +I G K
Sbjct: 316 HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHK 375
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+A +M EM S G P+ Y+ L++ ++ A ++ M G LV
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELV 431
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+N+LI C G V A + ++ +YN ++ L G
Sbjct: 244 MMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK---GVALDAVTYNTLITGLSG 300
Query: 58 IRQYKLIEWVYQQM--SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + ++M + P+++T+N V+ + G++ Q ++ D M +G + +
Sbjct: 301 VLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNL 360
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T+N+L+ L + K A+ L++ M G +P ++ L++G + +D + +
Sbjct: 361 VTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSK 420
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G P++V Y ++ + G +E+A++ FD M +L +V Y++MI G C
Sbjct: 421 MRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCKL-DVVAYSTMIHGACRLRD 479
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +K M G P+ + Y+ L++ N+G L A V++ M G
Sbjct: 480 RKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 148 PSV---LHFTTLMDGLSRAGN-LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
PSV + + T++ L R G LDA + MA++ P V YT ++ + A +
Sbjct: 73 PSVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHE-TRPTAVSYTTLMRALCAERRTGQ 131
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A L M G P+V TY ++IRG C A D+A +++EM G PN +VY+ L+
Sbjct: 132 AVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQ 191
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
AG+ +V M +G
Sbjct: 192 GYCKAGRWECVSKVFEEMSGRG 213
>gi|168002263|ref|XP_001753833.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694809|gb|EDQ81155.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 779
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 133/274 (48%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWVYQQ 70
+F LI G G + + K P +YN +++A G +++ + ++ Q
Sbjct: 111 SFTALINAYGRNGQHEASLHLLARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQ 170
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M EG PDI+TYN ++ A G +++ + M +G PD TYN L+ + G+ D+
Sbjct: 171 MRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADR 230
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
LL M++ G P V+ + L++ RAG A F +M GC PDVV ++
Sbjct: 231 HEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFST 290
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ +Y G ++ + LF M +G P+V TYN++I+ F G F E+ + ++ G
Sbjct: 291 LLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGG 350
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ Y L+ + G A ++ RHM++
Sbjct: 351 VEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQS 384
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 137/327 (41%), Gaps = 42/327 (12%)
Query: 12 TFNILICTCGEVGLARK-VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
T+N +I C + GL + ++ F + + +P +YN +L A + V++
Sbjct: 146 TYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACSSRGLVEEAGMVFRT 205
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M++ G PD +TYN ++ + + + LL EM ++G +PD YNIL+ G+ K
Sbjct: 206 MNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVVAYNILIEAYGRAGK 265
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA + M+E G P V+ F+TL++ + G D + F +M +G PDV Y
Sbjct: 266 YRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGCYDEVRLLFTDMKERGTEPDVNTYNT 325
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTY--------------------------- 223
+I + G +++ +LF ++ G P++ TY
Sbjct: 326 LIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAGLLYSCGKGGLHKAAKKIHRHMLQSY 385
Query: 224 --------NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+I + A + EA M+ GC P+ YN L+ G EA
Sbjct: 386 VTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGLYCEAG 445
Query: 276 EVIRHMVEKG------KYIHLVSKFKR 296
M+++G Y L+ F R
Sbjct: 446 SAYLTMIDEGISADVSTYNSLIEAFGR 472
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 118/274 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G +NILI G G R + F + + P +++ +L A
Sbjct: 241 MEQAGNAPDVVAYNILIEAYGRAGKYRAAAKMFKQMQEAGCTPDVVTFSTLLEAYGKHGC 300
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y + ++ M + G PD+ TYN ++ + G + L ++ G PD TY
Sbjct: 301 YDEVRLLFTDMKERGTEPDVNTYNTLIQVFGQGGFFQESINLFWDLLDGGVEPDMSTYAG 360
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL+ GKG AA + HM + P+ FT L+ A Y F+ M G
Sbjct: 361 LLYSCGKGGLHKAAKKIHRHMLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESG 420
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+ Y +I ++ G +A + MI +G +V TYNS+I F G FD+A
Sbjct: 421 CKPDLETYNALIGAHAGGGLYCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAI 480
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
++ME C+PN Y L+ AG EA
Sbjct: 481 EFSRDMEEARCSPNRHTYEALMGVYCTAGLFDEA 514
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 109/209 (52%), Gaps = 1/209 (0%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ Y I++ R G LD+ L ++M + + +++ L++ G+ + A+L+L
Sbjct: 72 PNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHEASLHL 131
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L MK P+++ + T+++ ++ G + F +M ++G PD++ Y ++++
Sbjct: 132 LARMKREKVTPNLITYNTVINACAKGGLEWEGLLGLFAQMRHEGIQPDIITYNTLLSACS 191
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+ G +E+A +F M G +P+ TYN+++ + A + + +++EME G P+ +
Sbjct: 192 SRGLVEEAGMVFRTMNEAGVVPDSITYNALVDIYGQADRHEGVGELLREMEQAGNAPDVV 251
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ AGK A ++ + M E G
Sbjct: 252 AYNILIEAYGRAGKYRAAAKMFKQMQEAG 280
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 103/259 (39%), Gaps = 17/259 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++ T F LI G L + F K +P +YNA++ A G
Sbjct: 381 MLQSYVTPTTDGFTGLITAYGNAALYSEATYAFNSMKESGCKPDLETYNALIGAHAGGGL 440
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y Y M DEG + D+ TYN ++ A R G D +M + SP+ HTY
Sbjct: 441 YCEAGSAYLTMIDEGISADVSTYNSLIEAFGRGGLFDDAIEFSRDMEEARCSPNRHTYEA 500
Query: 121 LLHV---LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ V G D+ A L E+ PSV + L+ +R D +EM
Sbjct: 501 LMGVYCTAGLFDEAKAQFLDLQVGGEL---PSVDSYCLLLSVCARRNRWDDASKVLEEML 557
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDL------FDGMITKGQLPNVFTYNSMIRGFC 231
MP + + I GE++ + FDG+ G N+ YN+++
Sbjct: 558 EPN-MPSIYG----VVGGILKGEMDDGTNWQRVEYAFDGLKVDGVGSNLRFYNALLEALW 612
Query: 232 MAGKFDEACTMMKEMESRG 250
G+ + AC + E RG
Sbjct: 613 CLGQRERACRVFAEARKRG 631
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++ C P+ YT+MI G L+KA +LF+ M NV+++ ++I + G+ +
Sbjct: 67 HQWCKPNEHVYTIMIGIMGREGMLDKASELFEDMPLNDVEWNVYSFTALINAYGRNGQHE 126
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ ++ M+ PN + YNT+++ G
Sbjct: 127 ASLHLLARMKREKVTPNLITYNTVINACAKGG 158
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 133/250 (53%), Gaps = 1/250 (0%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
++F +P SYN++L+AL+ ++ E + G +P++ TYNI++ R +
Sbjct: 106 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 165
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D+ LL+ M GFSPD +Y L++ L K AL L + M E G P V + L
Sbjct: 166 DKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 225
Query: 157 MDGLSRAGN-LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+DG + G+ L+A + + + P++ Y VMI G+ +++ +++ M
Sbjct: 226 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 285
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ +++TY+++I G C +G D A + KEM G +P+ +VYNT+++ AG++ E
Sbjct: 286 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 345
Query: 276 EVIRHMVEKG 285
E+ + M ++G
Sbjct: 346 ELWKVMEKEG 355
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 2/221 (0%)
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++Q+M + G P I +YN ++ A K D+ G SP+ TYNIL+ +
Sbjct: 100 IFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKIS 159
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + A LLN M E GF P V + TL++ L++ G + FDEM +G PDV
Sbjct: 160 CRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 219
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMK 244
CY ++I + G++ A ++++ ++ + PN+ +YN MI G C GKFDE+ +
Sbjct: 220 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 279
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ + Y+TL+ L +G L A V + M E G
Sbjct: 280 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 320
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 48/315 (15%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSK----LFNFRPFKNSYNAILHALLGIRQYKLI 64
++N++I C CG+ + ++ R K++ L+ +Y+ ++H L G
Sbjct: 257 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY-------TYSTLIHGLCGSGNLDGA 309
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS------------ 112
VY++M++ G +PD++ YN ++ R G++++ L M + G
Sbjct: 310 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 369
Query: 113 ----------------------PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
D TY +L+H L K AL++L + D
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 429
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
++++++GL R G LD D+M GC P+ +I ++ A +LE A F
Sbjct: 430 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGN 489
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M++KG P V TYN++I G A +F EA ++KEM +G PN + Y+ L++ L K
Sbjct: 490 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549
Query: 271 LAEAHEVIRHMVEKG 285
L A + +EKG
Sbjct: 550 LDMALNLWCQALEKG 564
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 110/214 (51%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D Y+ ++ R G+LD+ +LD+M + G P+ H N +++ + K AL
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+M G P+V+ + TL++GLS+A EM +KG P+++ Y++++
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
+L+ A +L+ + KG P+V +N +I G C +GK ++A + EM+ R C PN + +
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
NTL+ A ++ H+++ G ++S
Sbjct: 608 NTLMEGFYKVRDFERASKIWDHILQYGPQPDIIS 641
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 114/231 (49%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P + NA+++ + + + + M +G P ++TYN ++ + + + +
Sbjct: 461 KPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYA 520
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ EM G+ P+ TY++L++ L +G K ALNL E GF P V ++ GL
Sbjct: 521 LVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 580
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+G ++ + EM + C+P++V + ++ + + E+A ++D ++ G P++
Sbjct: 581 SSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDII 640
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+YN ++G C + +A + + RG P + +N LV + + G L
Sbjct: 641 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAVLDNGALT 691
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 116/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+++++ L + + V QM+ G P+ N V+ R KL+ R M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN L++ L K ++ A L+ M G+ P+++ ++ LM+GL + L
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKL 550
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + + KG PDV + ++I ++G++E A L+ M + +PN+ T+N++
Sbjct: 551 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ GF F+ A + + G P+ + YN + L + ++++A + V++G
Sbjct: 611 MEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E GF + NI+I C+ G+V A ++ + K P ++N ++ +
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV---PNLVTHNTLMEGFYKV 617
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R ++ ++ + G PDI++YNI +C+ +R+ D L D + R G P
Sbjct: 618 RDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRIS--DAVGFLNDAVDR-GVLPTA 674
Query: 116 HTYNILLHVL 125
T+NIL+ +
Sbjct: 675 ITWNILVRAV 684
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 130/253 (51%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + ++ V+ ++ G P ++++N +M RLG LD+ RL M
Sbjct: 131 FNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 190
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D
Sbjct: 191 ASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 250
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ D++ Y +I G+L++AQ+L D M KG P+ TY ++I
Sbjct: 251 LAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLI 310
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + +VY TL+S L G+ +A +++R M+
Sbjct: 311 DGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLK 370
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 371 PDTGTYTMIINEF 383
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 136/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ +AR V + K + RP S+N +++ +
Sbjct: 119 ILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITK---WGLRPSVVSFNTLMNGYIR 175
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 176 LGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVT 235
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M ++ + TL+ GL + G+L + DEM
Sbjct: 236 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMR 295
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A + MI + + Y ++I G C G+
Sbjct: 296 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSV 355
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + ++++ M G +V+
Sbjct: 356 DAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 95/181 (52%)
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
E+ G+ + +NIL+H K + A ++ + + + G PSV+ F TLM+G R G
Sbjct: 118 EILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLG 177
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+LD M G PDV Y+V+I +++ A +LFD M+ KG +PN T+
Sbjct: 178 DLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFT 237
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I G C G+ D A + K+M S+ + + + YNTL+ L G L +A +I M K
Sbjct: 238 TLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMK 297
Query: 285 G 285
G
Sbjct: 298 G 298
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 58/114 (50%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F+ E+ G + + +++ + GE+ A+ +FD + G P+V ++N+++ G+
Sbjct: 115 FYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYI 174
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L K+ A+E+ M++KG
Sbjct: 175 RLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKG 228
>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
Length = 1351
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 136/260 (52%), Gaps = 3/260 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A ++V++F K F SYN+++ L+ + E ++ +M + G PD TYN+
Sbjct: 818 AHELVKKF---KSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 874
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + ++++ ++ +EM R G+ + TYN ++ L K + A++L ++ G
Sbjct: 875 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 934
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P+ + L+DGL +AG ++ + F+EM GC + Y +++ + AG EK
Sbjct: 935 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 994
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF M+ +G P++ +Y +I C AG+ ++ T +++ G P+ + YN L+ L
Sbjct: 995 HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1054
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ +L EA + M +KG
Sbjct: 1055 GKSKRLEEAVSLFNEMQKKG 1074
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 138/281 (49%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++N LIC + L F + K P + +YN +L A+ + + +
Sbjct: 829 GVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEM 888
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V ++M +GY +TYN ++ + +L+Q L + GFSP TY LL
Sbjct: 889 LKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDG 948
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + A NL N M E G + + L++G AGN + + F +M ++G PD
Sbjct: 949 LLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPD 1008
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ YT++I + AG+L F ++ G P++ TYN +I G + + +EA ++
Sbjct: 1009 IKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFN 1068
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ +G PN YN+L+ +L AGK AEA ++ ++ KG
Sbjct: 1069 EMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1109
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + ++ + F P +Y +L LL +
Sbjct: 895 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 954
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ +M + G + YNI++ G ++ L +M G +PD +Y I
Sbjct: 955 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1014
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + L + E+G +P ++ + L+DGL ++ L+ F+EM KG
Sbjct: 1015 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1074
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P++ Y +I AG+ +A +++ ++TKG PNVFTYN++IRG+ ++G D A
Sbjct: 1075 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1134
Query: 241 TMMKEMESRGCNPN 254
M GC PN
Sbjct: 1135 AAYGRMIVGGCLPN 1148
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ L+ R+ + +Y + +G++P TY ++ + G+++ L +EM
Sbjct: 906 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 965
Query: 107 GRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
G + YNILL+ + G +K +L M + G +P + +T ++D L +A
Sbjct: 966 LEYGCKANCTIYNILLNGHRIAGNTEK---VCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1022
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G L+ +F ++ G PD++ Y ++I + LE+A LF+ M KG +PN++TY
Sbjct: 1023 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1082
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS+I AGK EA M +E+ ++G PN YN L+ +G A+ M+
Sbjct: 1083 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIV 1142
Query: 284 KG 285
G
Sbjct: 1143 GG 1144
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G A T+N L+ + G R+ +E + + P +Y+ ++ A R
Sbjct: 230 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRD 289
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + W+ ++M G P++ +Y I + + + D+ +R+L EM G PD T+ +
Sbjct: 290 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTV 349
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ VL + A ++ MK+ P + + TL+D + G + ++ M G
Sbjct: 350 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+VV YT +I + G + +A ++FD M KG +P ++YNS+I GF A +F +A
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K M+ G PN + ++ +G+ +A + M KG
Sbjct: 470 ELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 514
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G + A+ V F K K + +P + +Y +L + + + ++ M +G
Sbjct: 353 VLCDAGRISDAKDV---FWKMKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADG 409
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y +++ Y V+ A ++G++ + + DEM + G P+ ++YN L+ K D+ AL
Sbjct: 410 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 469
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L +M G P+ ++ ++G ++ M +KG +PDVV ++
Sbjct: 470 ELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 529
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G L A+ +F + G P+ TY MI+ A KFDEA + +M C P+
Sbjct: 530 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 589
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
LV N+L+ L AG+ EA ++ + E
Sbjct: 590 LVVNSLIDTLYKAGRGDEAWQIFYQLKE 617
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G + RT+++L+ G+ V+ + + +P SY + L R+
Sbjct: 265 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARR 324
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M +EG PD++T+ +++ G++ + +M +S PD TY
Sbjct: 325 FDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 384
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + + + + N MK G++ +V+ +T ++D L + G + FDEM KG
Sbjct: 385 LLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 444
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+ Y +I+ ++ A A +LF M G PN +T+ I + +G+ +A
Sbjct: 445 IVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAI 504
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+G P+ + N ++ L +G+L A V + G
Sbjct: 505 QRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 126/260 (48%), Gaps = 1/260 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ G + K ++R+ K P + NA+L L + + + V+ ++ G +PD
Sbjct: 495 GKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 554
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TY +++ + K D+ ++ +M + PD N L+ L K + A +
Sbjct: 555 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQ 614
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+KE+ +P+ + TL+ GL R G + + +EM + P+++ Y ++ G
Sbjct: 615 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 674
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A D+ M TKG +P++ +YN++I G +++EA ++ +M+ + P++ T
Sbjct: 675 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCT 733
Query: 261 LVSNLRNAGKLAEAHEVIRH 280
++ + G + EA +I+
Sbjct: 734 ILPSFVKIGLMKEALHIIKE 753
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 44 FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
F N Y ++ I++Y+L M +G PD++ N V+ + G+L R+
Sbjct: 490 FINYYGKSGESIKAIQRYEL-------MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 542
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
E+ G SPD TY +++ K K A+ + M E P VL +L+D L +A
Sbjct: 543 HELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKA 602
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G D F ++ P Y ++ G++++ L + M PN+ TY
Sbjct: 603 GRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 662
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N+++ C G ++A M+ M ++GC P+ YNT++ L + EA + M
Sbjct: 663 NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 720
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 102/222 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF T T+ L+ + G F + + + YN +L+
Sbjct: 930 LMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGN 989
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++Q M D+G PDI +Y I++ + G+L+ ++ G PD TYN+
Sbjct: 990 TEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNL 1049
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LGK + A++L N M++ G P++ + +L+ L +AG ++E+ KG
Sbjct: 1050 LIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1109
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
P+V Y +I Y +G + A + MI G LPN T
Sbjct: 1110 WKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGGCLPNSST 1151
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 125/320 (39%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIEN N LI T + G + + F + K N P +YN +L L +
Sbjct: 580 MIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGK 639
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + ++M Y P+++TYN ++ + G ++ +L M G PD +YN
Sbjct: 640 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNT 699
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV------------------GFDPSVLHFT-------- 154
+++ L K ++ A ++ MK+V G LH
Sbjct: 700 VIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPG 759
Query: 155 ---------TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+LM+G+ + + F + +A+ G D +I + +A
Sbjct: 760 SKTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 819
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L + G +YNS+I G D A + EM+ GC P+ YN L+ +
Sbjct: 820 ELVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 879
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ ++ E +V M KG
Sbjct: 880 GKSMRIEEMLKVQEEMHRKG 899
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 131/357 (36%), Gaps = 74/357 (20%)
Query: 1 MIENGFPTTARTFN-ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M + +P T+N IL C C G ++ P +SYN +++ L+
Sbjct: 650 MYHSNYPPNLITYNTILDCLCKN-GAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 708
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE-------------- 105
+Y ++ QM + PD T ++ + ++G + + ++ E
Sbjct: 709 RYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSC 767
Query: 106 ----------------------MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
+ SG + D L+ L K K L A L+ K
Sbjct: 768 HSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 827
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD------------------- 184
G + +L+ GL +D + F EM GC PD
Sbjct: 828 FGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE 887
Query: 185 ----------------VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
V Y +I+ + + LE+A DL+ ++++G P TY ++
Sbjct: 888 MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD 947
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G AG+ ++A + EM GC N +YN L++ R AG + + + MV++G
Sbjct: 948 GLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1004
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G L L M +G + +TYN L++ L K AL + M G PSV +
Sbjct: 218 GGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMMVDGVVPSVRTY 277
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ LM + +++ + EM G P+V YT+ I A ++A + M
Sbjct: 278 SVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRILAEMEN 337
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G P+V T+ +I+ C AG+ +A + +M+ P+ + Y TL+ + G+
Sbjct: 338 EGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADNGESQS 397
Query: 274 AHEVIRHMVEKG 285
E+ M G
Sbjct: 398 VMEIWNAMKADG 409
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F + GL G L + M G + + Y ++ + +G +A +++ M+
Sbjct: 207 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYKVMM 266
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G +P+V TY+ ++ F + +++EME+ G PN Y + L A +
Sbjct: 267 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFD 326
Query: 273 EAHEVIRHMVEKG 285
EA+ ++ M +G
Sbjct: 327 EAYRILAEMENEG 339
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 159/389 (40%), Gaps = 104/389 (26%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ IL+C C ++G ++++ I + P + +N+++HA Y +
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCY---PSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 69 QQMSDEGYAPDILTYNIVM---CAKYRL-------------------------------- 93
++M D G P + YNI++ C +L
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 94 ------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
GK ++ + ++ EM GF PD TY+ ++ +L K A L MK
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P V +T L+D + G L + +FDEM GC P+VV YT +I +Y+ A ++ A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM--------------------- 246
F+ M+++G +PNV TY ++I G C +G+ ++AC + M
Sbjct: 573 FEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR 632
Query: 247 ---------------------ESR---------GCNPNFLVYNTLVSNLRNAGKLAEAHE 276
E+R GC PN +VY+ L+ GKL EA
Sbjct: 633 DPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQM 692
Query: 277 VIRHMVEKG------KYIHLVSKFKRYKR 299
V M E+G Y L+ + + KR
Sbjct: 693 VFTKMSERGYGPNVYTYSSLIDRLFKDKR 721
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 16/290 (5%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ ILI + +VGL ++ + F + P +Y A++HA L R+ +++ M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH--------------- 116
EG P+++TY ++ + G++++ ++ M + PD
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636
Query: 117 -TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L K K A +LL+ M G +P+ + + L+DG + G LD + F +
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ +G P+V Y+ +I L+ A + M+ PNV Y MI G C GK
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
DEA +M ME +GC+PN + Y ++ AGK+ + E++R M KG
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 126/263 (47%), Gaps = 16/263 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKV------------VERFIKSKLFNFR-PF 44
M+ G T+ LI C G++ A ++ V+ + K N R P
Sbjct: 576 MLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPN 635
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A++ L + K + MS EG P+ + Y+ ++ ++GKLD+ +
Sbjct: 636 IFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFT 695
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M G+ P+ +TY+ L+ L K + AL +L+ M E P+V+ +T ++DGL + G
Sbjct: 696 KMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVG 755
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D M KGC P+VV YT MI + AG+++K +L M KG PN TY
Sbjct: 756 KTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYR 815
Query: 225 SMIRGFCMAGKFDEACTMMKEME 247
+I C AG D+A ++ EM+
Sbjct: 816 VLINHCCAAGLLDDAHQLLDEMK 838
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 103/202 (50%), Gaps = 3/202 (1%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P LTYN ++ +LD + + EM SGF+ D +T +H+L K
Sbjct: 222 RLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAG 281
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AL L+ +E D + +T ++ GL A + F M + C+P+VV Y
Sbjct: 282 RWREALALIEK-EEFKLDTVI--YTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYR 338
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + +L + + + MIT+G P+ +NS+I +C +G + A ++K+M
Sbjct: 339 ILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDC 398
Query: 250 GCNPNFLVYNTLVSNLRNAGKL 271
GC P ++VYN L+ + KL
Sbjct: 399 GCQPGYVVYNILIGGICGNEKL 420
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G+ T++ LI + LA KV+ R +++ + P Y ++ L
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLEN---SCAPNVIIYTEMIDGLCK 753
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M ++G P+++TY ++ + GK+D+ L+ +MG G +P+F T
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVT 813
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L++ A LL+ MK+ + + + +++G +R + DE+A
Sbjct: 814 YRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISL--GLLDEIA 871
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM--ITKGQLPNVFTYNSMIRGFCMAGK 235
+P + Y ++I S+ AG LE A +L M T + Y+S+I +A K
Sbjct: 872 ENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASK 931
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D+A + +M RG P ++ LV L
Sbjct: 932 VDKAFELYADMIKRGGIPELSIFFYLVKGL 961
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L +K++G+ PS L + L+ A LD EM++ G D +
Sbjct: 216 ALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVH 275
Query: 194 SYIAAGELEKAQDLFDGMITKGQLP-NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
AG +A +I K + + Y MI G C A F+EA + M S C
Sbjct: 276 LLCKAGRWREAL----ALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCI 331
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
PN + Y L+ +L ++ M+ +G Y
Sbjct: 332 PNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCY 366
>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 40/321 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T TFN LI GE ++K++E + S+ N RP +YN ++ A
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLE--LMSQDENVRPNLRTYNVLVRAWCN 225
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V +M G PD +TYN + A + G+ Q ++ EM S P+ T
Sbjct: 226 KKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPS---------------------------- 149
I++ K K AL + MK++G P+
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345
Query: 150 -------VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
V+ F+T+M+ S AG +D C+ FD+M PD Y+++ Y+ AGE E
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA+++ + MI G PNV + ++I G+C AG+ + A + ++M G PN + TL+
Sbjct: 406 KAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
A + ++ EV++ M E
Sbjct: 466 WGYGEARQPWKSEEVLQIMEE 486
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+ + +LD + G P TY LL L + ++++ ++E G +P + F
Sbjct: 86 GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+++ S +GN+ +F +M G P + +I Y AGE E++Q L + M
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
Query: 214 KGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ PN+ TYN ++R +C +A ++ +M + G P+ + YNT+ + G+ +
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265
Query: 273 EAHEVIRHM 281
+A +I M
Sbjct: 266 QAEGIILEM 274
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 36/247 (14%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ P ++TY ++ A D H ++ ++ +G PD +N +++ + A
Sbjct: 102 GHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEA 161
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD-------------------- 174
+ MKE G P+ F TL+ G AG + + +
Sbjct: 162 MKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVR 221
Query: 175 ----------------EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+M G PD V Y + T+Y GE +A+ + M P
Sbjct: 222 AWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQP 281
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N T +I G+C GK EA + M+ G PN +V+N+L+ +A +EV+
Sbjct: 282 NERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVL 341
Query: 279 RHMVEKG 285
M E G
Sbjct: 342 TLMEEFG 348
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++++ + +P ++L+ + E G PS++ +TTL+ L+ + D+ ++ G
Sbjct: 78 LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + + +I ++ +G +++A F M G P T+N++I+G+ +AG+ +E+
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQ 197
Query: 241 TMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M + PN YN LV N + +A V+ MV G
Sbjct: 198 KLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASG 243
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 180 GCMPDVVCYTV-----MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
C+ C TV ++ I G ++ Q + D +I G P++ TY +++ +
Sbjct: 62 SCLSKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQK 121
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
FD +++ ++E G P+ + +N +++ +G + EA + M E G
Sbjct: 122 HFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESG 172
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 1/162 (0%)
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
LH + + P + + ++ + + +V T LM+ + G + D + G
Sbjct: 45 LHPVSQSADPQSQVRCISCLSKTSCR-TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGH 103
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P +V YT ++ + + + + G P+ +N++I F +G EA
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+M+ G P +NTL+ AG+ E+ +++ M +
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 142/280 (50%), Gaps = 10/280 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+ LI C +V A K+ + + S + R S +A++ L R+ ++
Sbjct: 118 TFSALITGWCNARKVDEALKLYKEILTS---SCRLDAVSSSALITGLCRERRIGEAYELF 174
Query: 69 QQMS---DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
Q+M D + PD++TY ++ + G L++ ++L M P+ TY+ LLH L
Sbjct: 175 QEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGL 234
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K AL+L M G P+V+ +TTL+ GL A +DA + DEM C D
Sbjct: 235 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADT 294
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++ Y G +E+A+ LF M K LP+ TY ++RGFC A + +EA +++
Sbjct: 295 VSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 354
Query: 246 MES-RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M++ G +P+ + Y+ +V+ A + EA E I+ M+ +
Sbjct: 355 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIAR 394
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 5/255 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSD-EGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P + +YN +++ L R V ++M D + APD++TY+ V+ + G++D+
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 102 LLDEM-GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L EM R G +PD TY ++ L + K A ++ MK G +P F+ L+ G
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK---GQL 217
A +D + E+ C D V + +IT + +A +LF M +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+V TY ++I GFC +G ++A M+ ME R C PN + Y++L+ L AG L +A ++
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 278 IRHMVEKGKYIHLVS 292
R M KG ++V+
Sbjct: 247 FRRMTSKGCVPNVVT 261
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 135/273 (49%), Gaps = 10/273 (3%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRL 93
KL P K +++A++ R+ +Y+++ D ++ + + +C + R+
Sbjct: 108 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRI 167
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+ + + ++ + PD TY L+ K A+ +L M+ P+V+ +
Sbjct: 168 GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 227
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
++L+ GL +AG+LD F M +KGC+P+VV YT +I AA +++ A+ L D M
Sbjct: 228 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ +YN+++ G+C G+ +EA + KEM ++ C P+ + Y LV NA +L E
Sbjct: 288 TCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEE 347
Query: 274 AHEVIRHMVEKG-------KYIHLVSKFKRYKR 299
A ++ +M Y +V+ + R KR
Sbjct: 348 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKR 380
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 117/241 (48%), Gaps = 5/241 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYNA+L + + + + ++++M+ + PD +TY ++ +L++ LL+ M
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355
Query: 107 GRS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ G PD TY+I++ + + + A + M P+ + +++L+DGL +AG
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
++ + PDVV YT++I E+A L + M+ K P+V T+NS
Sbjct: 416 VNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNS 471
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I C G DEA ++ M + G P + Y TL+ G++ A+E+ M K
Sbjct: 472 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA 531
Query: 286 K 286
K
Sbjct: 532 K 532
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+M AP+ +TY+ ++ + G+++ +L + + PD TY I++ L
Sbjct: 389 QEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGT 444
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D+ AL LL M +PSV F +++ L R G++D MA G P +V Y
Sbjct: 445 DRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTY 504
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQ-------LPNVFTYNSMIRGFCMAGKFDEACT 241
T ++ + G +E A +LF+ M K + L ++++IRG C A + D+A
Sbjct: 505 TTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMA 564
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++E+ SR C P +V L AG+ EA ++I + + G
Sbjct: 565 VVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE-VGFDPSVLHFTTLMDGLSRAGNL 166
R +P+ TYN++++ L K A +L M++ P ++ ++T+++G + G +
Sbjct: 2 REFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEM 61
Query: 167 D-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
D AC+ + + G PDVV YT ++ G++++A ++ M KG P+ FT+++
Sbjct: 62 DRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSA 121
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+I G+C A K DEA + KE+ + C + + + L++ L ++ EA+E+ + M
Sbjct: 122 LITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEM 177
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 17/225 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI A T++ LI C G V A +V++ K P +Y ++ L G
Sbjct: 391 MIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK-------PDVVTYTIVIEGLCG 443
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M ++ P + T+N V+ A RLG +D+ +LL M G P T
Sbjct: 444 TDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVT 503
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL-------HFTTLMDGLSRAGNLDACK 170
Y LL + + A L M+ S F+ L+ GL +A +D
Sbjct: 504 YTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAM 563
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+E+ ++ C P ++ + AG E+A L + + G
Sbjct: 564 AVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608
>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Vitis vinifera]
Length = 635
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 146/321 (45%), Gaps = 40/321 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T TFN LI GE ++K++E + S+ N RP +YN ++ A
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLE--LMSQDENVRPNLRTYNVLVRAWCN 225
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V +M G PD +TYN + A + G+ Q ++ EM S P+ T
Sbjct: 226 KKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNERT 285
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPS---------------------------- 149
I++ K K AL + MK++G P+
Sbjct: 286 CCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLME 345
Query: 150 -------VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
V+ F+T+M+ S AG +D C+ FD+M PD Y+++ Y+ AGE E
Sbjct: 346 EFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEPE 405
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA+++ + MI G PNV + ++I G+C AG+ + A + ++M G PN + TL+
Sbjct: 406 KAEEILNAMIKSGFHPNVVIFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETLI 465
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
A + ++ EV++ M E
Sbjct: 466 WGYGEARQPWKSEEVLQIMEE 486
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+ + +LD + G P TY LL L + ++++ ++E G +P + F
Sbjct: 86 GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+++ S +GN+ +F +M G P + +I Y AGE E++Q L + M
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
Query: 214 KGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ PN+ TYN ++R +C +A ++ +M + G P+ + YNT+ + G+ +
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265
Query: 273 EAHEVIRHM 281
+A +I M
Sbjct: 266 QAEGIILEM 274
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 36/247 (14%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ P ++TY ++ A D H ++ ++ +G PD +N +++ + A
Sbjct: 102 GHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEA 161
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD-------------------- 174
+ MKE G P+ F TL+ G AG + + +
Sbjct: 162 MKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQDENVRPNLRTYNVLVR 221
Query: 175 ----------------EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+M G PD V Y + T+Y GE +A+ + M P
Sbjct: 222 AWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQP 281
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N T +I G+C GK EA + M+ G PN +V+N+L+ +A +EV+
Sbjct: 282 NERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVL 341
Query: 279 RHMVEKG 285
M E G
Sbjct: 342 TLMEEFG 348
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++++ + +P ++L+ + E G PS++ +TTL+ L+ + D+ ++ G
Sbjct: 78 LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + + +I ++ +G +++A F M G P T+N++I+G+ +AG+ +E+
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQ 197
Query: 241 TMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M + PN YN LV N + +A V+ MV G
Sbjct: 198 KLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASG 243
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 180 GCMPDVVCYTV-----MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
C+ C TV ++ I G ++ Q + D +I G P++ TY +++ +
Sbjct: 62 SCLSKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQK 121
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
FD +++ ++E G P+ + +N +++ +G + EA + M E G
Sbjct: 122 HFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESG 172
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 1/162 (0%)
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
LH + + P + + ++ + + +V T LM+ + G + D + G
Sbjct: 45 LHPVSQSADPQSQVRCISCLSKTSCR-TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGH 103
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P +V YT ++ + + + + G P+ +N++I F +G EA
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+M+ G P +NTL+ AG+ E+ +++ M +
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLELMSQ 205
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 148/295 (50%), Gaps = 2/295 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIR 59
M+ +G T+N +I + G+ + ++ ++ +F F P + +Y+++++ L
Sbjct: 312 MVNSGVEPNEFTYNTIINGFCKAGMMQNA-DKILRDAMFKGFIPDEFTYSSLINGLCNDG 370
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
V+ + ++G+ I+ YN ++ + G + Q +L+ +M G SPD TYN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++++ L K A +LN G P + F TL+DG + N+D D M +
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PDV+ Y ++ A +L+ D F M+ KG PN+ TYN +I FC K EA
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+ KEM++RG P+ + TL+ L + G+L +A+E+ + ++ K+ + + F
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIF 605
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNSYNAILHALLGI 58
++ G ++N LIC G ++ V K+ N P + +YN I++
Sbjct: 277 IVSEGLTPDVISYNTLIC--GFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + + +G+ PD TY+ ++ G +++ + E GF Y
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L K L AL L+ M E G P + + +++GL + G L ++
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KGC+PD+ + +I Y ++KA ++ D M++ G P+V TYN+++ G C A K D
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K M +GC PN + YN L+ + K++EA E+ + M +G
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRG 561
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 135/301 (44%), Gaps = 37/301 (12%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G ++ V F + ++ P SYNAI++ L+ + VY +M D G PD+
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDV 146
Query: 81 LTYNIVM---------CAKYRL---------------------------GKLDQFHRLLD 104
T+ I M A RL +++ +H L D
Sbjct: 147 YTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYH-LFD 205
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM + G PD T+N L+HVL K + L + + + G P++ F + GL R G
Sbjct: 206 EMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKG 265
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D + + ++G PDV+ Y +I + +L +A+ M+ G PN FTYN
Sbjct: 266 AIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYN 325
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I GFC AG A ++++ +G P+ Y++L++ L N G + A V +EK
Sbjct: 326 TIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEK 385
Query: 285 G 285
G
Sbjct: 386 G 386
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TFN LI C G V + K+ + +K + P ++N + L
Sbjct: 207 MLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC---PNLFTFNIFIQGLCR 263
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + EG PD+++YN ++C + KL + L +M SG P+ T
Sbjct: 264 KGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFT 323
Query: 118 YNILLH------VLGKGDKPL-----------------------------AALNLLNHMK 142
YN +++ ++ DK L A+ +
Sbjct: 324 YNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAM 383
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E GF S++ + TL+ GLS+ G + +M GC PD+ Y +++ G L
Sbjct: 384 EKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLS 443
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A + + I KG +P++FT+N++I G+C D+A ++ M S G P+ + YNTL+
Sbjct: 444 DANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLL 503
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L A KL + + M+EKG
Sbjct: 504 NGLCKARKLDNVVDTFKAMLEKG 526
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +G PDILT+N ++ + G + + +L ++ + G P+ T+NI + L
Sbjct: 203 LFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLC 262
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A LL + G P V+ + TL+ G + L + + +M N G P+
Sbjct: 263 RKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEF 322
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + AG ++ A + + KG +P+ FTY+S+I G C G + A + E
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + ++YNTLV L G + +A ++++ M+E G
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHG 421
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+N+++ C G + A ++ I P ++N ++
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI---PDIFTFNTLIDGYCK 473
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + M G PD++TYN ++ + KLD M G +P+ T
Sbjct: 474 QRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIIT 533
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ K K A+ L MK G P ++ TL+ GL G LD F +
Sbjct: 534 YNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIE 593
Query: 178 NKGCMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ + +MI ++ + A+ LF M P+ +TY MI +C G
Sbjct: 594 KEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNI 653
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A T + E S+G P+F +++ L +L+EA +I MV+ G
Sbjct: 654 DLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 15/212 (7%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
L L F+++ E GF TY ++ LG K A ++L M++ D +L
Sbjct: 21 LNALKMFNQVKTE---DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK-NVDSKMLE 76
Query: 153 --FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ +M R G + F+ M C P V Y ++ + G +A ++
Sbjct: 77 GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G P+V+T+ ++ FC+ G+ A ++ M +GC N + Y ++S
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196
Query: 271 LAEAHEVIRHMVEKG---------KYIHLVSK 293
EA+ + M+++G K IH++ K
Sbjct: 197 QIEAYHLFDEMLKQGICPDILTFNKLIHVLCK 228
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 121/243 (49%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N ++ A ++ +M D G P++LTY V+ A R+GK+D
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++M G +PD + Y+ L+ L A L++ + G ++ F+++++ L +
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + + FD N G P V Y++++ Y G++EKA +FD M++ G PN
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +++ G+C G+ DE ++ +EM +G P+ ++YN ++ L AG+ A M
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631
Query: 283 EKG 285
E G
Sbjct: 632 ESG 634
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 108/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G PD +TY+ V+ A + +D+ L +M G P+ TYN L++
Sbjct: 241 LFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYS 300
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ + M+ P V+ F LM L + G + + FD MA KG PDV
Sbjct: 301 STGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +M+ Y G L DLFD M+ G P + T+N +I+ + G D+A + EM
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G PN L Y T+++ L GK+ +A E M+++G
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQG 459
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 120/245 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y++++HAL R E +QM ++G P+ TYN ++ G+ + R+ EM
Sbjct: 256 TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R PD T+N+L+ L K K A ++ + M G +P V + +++G + G L
Sbjct: 316 RRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCL 375
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
FD M G P + + V+I +Y G L+KA +F+ M G PNV TY ++
Sbjct: 376 VDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTV 435
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C GK D+A +M +G P+ Y+ L+ G L +A E+I ++ G
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGM 495
Query: 287 YIHLV 291
++ +V
Sbjct: 496 HLDIV 500
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 153/358 (42%), Gaps = 76/358 (21%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T++ ++ C + A + + + + P +YN +++
Sbjct: 245 MVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL---PNNWTYNNLIYGYSS 301
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+K V+++M + PD++T+N++M + + GK+ + + D M G +PD +
Sbjct: 302 TGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361
Query: 118 YNILLH-----------------VLGKGDKPL------------------AALNLLNHMK 142
YNI+L+ +LG G P+ A+ + N M+
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 421
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G P+VL +TT++ L R G +D F++M ++G PD Y +I + G L
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481
Query: 203 KA-----------------------------------QDLFDGMITKGQLPNVFTYNSMI 227
KA Q++FD + G P Y+ ++
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+C+ GK ++A + M S G PN +VY TLV+ G++ E + R M++KG
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 4 NGF-PTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
NGF AR + C G V L + R ++ + P ++Y ++
Sbjct: 68 NGFLAAIARAPSSAACRSGPALAVALFNRAASRAQGPRVLS--PTSHTYAILMDCCTRAH 125
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-FHRLLDEMGRSGFSPDFHTY 118
+ +L + Q+ G DI+ N ++ + D+ LL G PD +Y
Sbjct: 126 RPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSY 185
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+ILL L K A +LL M E G P V+ + T++DG + G+++ F EM
Sbjct: 186 SILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEM 245
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD V Y+ ++ + A ++KA+ M+ KG LPN +TYN++I G+ G++
Sbjct: 246 VQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQW 305
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
EA + KEM + P+ + +N L+ +L GK+ EA +V M KG+
Sbjct: 306 KEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQ 355
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 119/265 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TFN+LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 385 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGK 444
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G APD Y+ ++ G L + L+ E+ +G D ++
Sbjct: 445 MDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSS 504
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P+ + ++ LMDG G ++ FD M + G
Sbjct: 505 IINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAG 564
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y ++ Y G +++ LF M+ KG P+ YN +I G AG+ A
Sbjct: 565 IEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 624
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G N Y+ ++ L
Sbjct: 625 VKFHEMTESGIAMNKCTYSIVLRGL 649
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A+ + + + L P Y+ ++ + + + V+ M G
Sbjct: 509 LCKLGRVMDAQNIFDLTVNVGL---HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 565
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ + Y ++ ++G++D+ L EM + G P YNI++ L + + + A
Sbjct: 566 EPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 625
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M E G + ++ ++ GL + D + F E+ D++ MI
Sbjct: 626 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 685
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+E+A+DLF + G +P V TY+ MI G +EA M M++ GC P+
Sbjct: 686 QTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 745
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ N +V L ++ A + + E+
Sbjct: 746 LLNHVVRELLKKNEIVRAGAYLSKIDER 773
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 127/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G ++ LI CT G + A++++ + + + +++I++ L
Sbjct: 455 MIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVL---FSSIINNLCK 511
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ + G P + Y+++M +GK+++ R+ D M +G P+
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ K + L+L M + G PS + + ++DGL AG K F EM
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 631
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + Y++++ ++A LF + ++ T N+MI G + +
Sbjct: 632 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 691
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + G P + Y+ +++NL G + EA ++ M G
Sbjct: 692 EAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 6/272 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TA +++L+ C G++ A +V + + + + P Y +++ I +
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI---EPNDVVYGTLVNGYCKIGRI 585
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M +G P + YNI++ + G+ EM SG + + TY+I+
Sbjct: 586 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 645
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L K A+ L ++ + ++ T++ G+ + ++ K F ++ G
Sbjct: 646 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 705
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P VV Y++MIT+ I G +E+A+D+F M G P+ N ++R + A
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ +++ R + L LV + G E
Sbjct: 766 YLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL----LGIR 59
NG T T+N L+ ++G + ++ K P +Y +++ L
Sbjct: 296 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 355
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YKL +++M+ G A D + Y ++ + GK+ Q + M G PD T +
Sbjct: 356 AYKL----FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K + AA+ + M+ G P+ + ++ L+ GL +A +D +M
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
C PD + Y ++I +G++E A+ FD M+ G P+V+TYN +I GFC AG D A
Sbjct: 472 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C + +M S C+ N + Y L+S L +L +A +HM E+G
Sbjct: 532 CGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFK-NSYNAILHALLGIR 59
M+E G T+NILI + G + N ++Y AI+ L +
Sbjct: 222 MLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNK 281
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + ++++ G P I TYN ++ ++G+L++ LL ++ +G +PD TY
Sbjct: 282 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 341
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ LGK + A L M G + +T L+ L + G + + M +
Sbjct: 342 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 401
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC+PDVV + MI AG + A +F M +G PN Y+++I G C A K D A
Sbjct: 402 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 461
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ +M+ C P+ + YN L+ L +G + A M+E G
Sbjct: 462 LEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 507
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 140/334 (41%), Gaps = 77/334 (23%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YNA+L+ L + + + + +++ D G PD++TY ++ + + + ++L
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
EM G + D Y L+ L + K A ++ M G P V+ +T++DGLS+
Sbjct: 79 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138
Query: 163 AGNLDACKYFFDEMANKG-----------------------------------CMPDVVC 187
AG + A F M +G C PD +
Sbjct: 139 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 198
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG------------- 234
Y V+I +G++E A+ FD M+ G P+V+TYN +I GFC AG
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQET 258
Query: 235 -----------------------KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
K +EA +M+++ + GC P YN L++ L G+L
Sbjct: 259 TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRL 318
Query: 272 AEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
EA +++R +V+ G Y L+ + KR
Sbjct: 319 EEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 352
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 106/217 (48%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++++ G P I TYN ++ ++G+L++ LL ++ +G +PD TY L+ LGK
Sbjct: 10 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 69
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L M G + +T L+ L + G + + M + GC+PDVV
Sbjct: 70 KRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 129
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ MI AG + A +F M +G PN Y+++I G C A K D A M+ +M+
Sbjct: 130 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 189
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C P+ + YN L+ L +G + A M+E G
Sbjct: 190 AFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAG 226
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 125/286 (43%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T + +I + G V F + P + Y+A++H L R+
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM PD +TYN+++ + G ++ DEM +G PD +TYNI
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 236
Query: 121 LLHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K G+ A+ +L G + +T ++D L++ ++ +++
Sbjct: 237 LISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITAN 296
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P + Y ++ G LE+A DL ++ G P+V TY S+I G + EA
Sbjct: 297 GCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 356
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM RG + + Y L+ L GK+ +A V + M G
Sbjct: 357 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 104/187 (55%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K+++ L++++ +G +P TYN LL+ L K + A++LL + + G P V+ +T
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+L+DGL + F EMA +G D VCYT +I + G++ +A ++ M +
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +P+V T ++MI G AG+ A + K ME+RG PN +VY+ L+ L A K+ A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 275 HEVIRHM 281
E++ M
Sbjct: 181 LEMLAQM 187
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 74/180 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T + +I + G V F + P + Y+A++H L R+
Sbjct: 398 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 457
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM PD +TYNI++ + G ++ DEM +G PD +TYNI
Sbjct: 458 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 517
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K AA + + M +V+ + L+ GL + L +F M +G
Sbjct: 518 LISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 51/92 (55%)
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
++E+A L + + G P + TYN+++ G C G+ +EA +++++ GC P+ + Y
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+L+ L + EA+++ + M +G + V
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTV 92
>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
Length = 1128
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T T+NI+I C G++ AR + E K P +YN+++
Sbjct: 124 MIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM---KFRGLIPDTVTYNSMIDGYGK 180
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +++M PD++TYN ++ + GKL + EM +SG P+ +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K D A+ M+ VG P+ +T+L+D + GNL +EM
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +VV YT +I A +++A+ LF M+T G +PN+ +YN++I GF A D
Sbjct: 301 EVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMD 360
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ E++ RG P+ L+Y T + L K+ A V+ M E G
Sbjct: 361 RALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 4/288 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF F++LI ++G+ + + F K K F P S N +LH + + +
Sbjct: 62 GFGVFDALFSVLI----DLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ M G P + TYNI++ ++ G ++ L +EM G PD TYN ++
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK + + MK + +P V+ + +L++ ++G L F+ EM G P+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ ++ ++ +++A + M G +PN FTY S++ C G +A +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM G N + Y L+ L +A ++ EA ++ MV G +L S
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLAS 345
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 1/287 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
P T T+N +I G+VG V F + K + P +YN++++ +
Sbjct: 165 IPDTV-TYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGL 223
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
Y++M G P++++Y+ ++ A + + Q + +M R G P+ TY L+
Sbjct: 224 EFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDAN 283
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K A L N M EVG + +V+ +T L+DGL A + + F +M G +P++
Sbjct: 284 CKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNL 343
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y +I ++ A +++A +L + + +G P++ Y + I G C K + A +M E
Sbjct: 344 ASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNE 403
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ G N L+Y TL+ +G E ++ M E + +V+
Sbjct: 404 MQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVT 450
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 7/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G T+ LI C + A K+ + + + + P SYNA++H +
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVI---PNLASYNALIHGFVK 355
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ G PD+L Y + L K++ +++EM +G +
Sbjct: 356 AKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLI 415
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K P L+LL M+E+ + +V+ F L+DGL + + +F M+
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMS 475
Query: 178 NK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
N G P+ YT MI +++ A LF+ M +G +P+ Y S++ G G
Sbjct: 476 NDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
EA + +M G + L Y +LV +L +A + M+
Sbjct: 536 LEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMI 581
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 138/328 (42%), Gaps = 36/328 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G +++ L+ + + ++ ++ ++ + P + +Y +++ A I
Sbjct: 229 MKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGN 288
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G +++TY ++ ++ + +L +M +G P+ +YN
Sbjct: 289 LSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNA 348
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H K AL LLN +K G P +L + T + GL ++A K +EM G
Sbjct: 349 LIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENG 408
Query: 181 CMPDVVCYTVMITSYIAAGE-------LEKAQD------------LFDG-----MITK-- 214
+ + YT ++ +Y +G LE+ Q+ L DG +++K
Sbjct: 409 IKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAI 468
Query: 215 ----------GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
G PN Y +MI G C + A T+ ++M G P+ Y +L+
Sbjct: 469 DYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDG 528
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + EA + M E G + L++
Sbjct: 529 NLKQGNMLEALALRDKMAEIGMKLDLLA 556
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 2/255 (0%)
Query: 12 TFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
T+N LI C C + G K +E + + K +P SY+ ++ A + Y
Sbjct: 205 TYNSLINCFC-KSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVD 263
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G+ P+ TY ++ A ++G L RL +EM G + TY L+ L ++
Sbjct: 264 MRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAER 323
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M G P++ + L+ G +A N+D +E+ +G PD++ Y
Sbjct: 324 MKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGT 383
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
I ++E A+ + + M G N Y +++ + +G E +++EM+
Sbjct: 384 FIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELD 443
Query: 251 CNPNFLVYNTLVSNL 265
+ + L+ L
Sbjct: 444 HEVTVVTFCVLIDGL 458
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 36/275 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G ++N LI + + +E + K +P Y + L G+ +
Sbjct: 334 MVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEK 393
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-------------- 106
+ + V +M + G + L Y +M A ++ G + LL+EM
Sbjct: 394 IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCV 453
Query: 107 ------------------GRS----GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
GR G P+ Y ++ L K ++ AA L M +
Sbjct: 454 LIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQE 513
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P +T+LMDG + GN+ D+MA G D++ YT ++ + +L+KA
Sbjct: 514 GLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKA 573
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+ + MI + LP+ +++ G DEA
Sbjct: 574 RSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEA 608
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 19/181 (10%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M R+GF+ +Y I+ H+L A ++L + LS+A
Sbjct: 1 MNRNGFNHTIESYCIVAHILFCARMYYDANSILREIV-----------------LSKA-E 42
Query: 166 LDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
L+ C F + + + C+P + + + I G LE+A F M P + N
Sbjct: 43 LEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCN 102
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ F GK D K+M G P YN ++ + G + A + M +
Sbjct: 103 GLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFR 162
Query: 285 G 285
G
Sbjct: 163 G 163
>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 1/277 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL-IE 65
P TFNILI VG + E F + F P +YN +++ L + + E
Sbjct: 175 PPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCE 234
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ S +PDI+TY ++ + GK+ + L +EM RSG P+ T+N+L+
Sbjct: 235 LFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGF 294
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
GK A + M V+ FT+L+DG RAG ++ F++ M + P V
Sbjct: 295 GKIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTV 354
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y V+I + L +A+D + +P F YN +I GFC AG DE ++KE
Sbjct: 355 YTYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKE 414
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
ME + C+P+ + + L+ G++ EA + M+
Sbjct: 415 MEEKRCDPDKVTFTILIIGHCVKGRMFEAINIFNRML 451
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 127/269 (47%), Gaps = 12/269 (4%)
Query: 25 LARKVVERFIKSKL-FNFRPFK----------NSYNAILHALLGIRQYKLIEWVYQQMSD 73
+A +V++RF K+ F F F ++YN ++ +L + + L+ V+ M
Sbjct: 42 IAFEVIKRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMGHHDLVNIVFDYMGS 101
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
+G+ PD ++ + D +LL E+ + YN LL VL K ++
Sbjct: 102 DGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYNNLLSVLVKQNQVHE 161
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ L + P F L+ GL R G +D F +M + GC+PDVV Y +I
Sbjct: 162 AIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLIN 221
Query: 194 SYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A E+++ +LF + ++ P++ TY S+I GFC +GK EA + +EM G
Sbjct: 222 GLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQ 281
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
PN + +N L+ G +AEA + R M
Sbjct: 282 PNVITFNVLIDGFGKIGNIAEAEAMYRKM 310
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%), Gaps = 1/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N ++ L + V++ M G PD++TYN ++ + ++ + L
Sbjct: 176 PDTWTFNILIRGLCRVGGVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCEL 235
Query: 103 LDEM-GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
E+ RS SPD TY ++ K K A NL M G P+V+ F L+DG
Sbjct: 236 FKEIQSRSDCSPDIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFG 295
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ GN+ + + +MA C DVV +T +I Y AG++ ++ M T+ P V+
Sbjct: 296 KIGNIAEAEAMYRKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVY 355
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +I C + +EA + ++++ P +YN ++ AG + E + +++ M
Sbjct: 356 TYAVLINALCKENRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEM 415
Query: 282 VEK 284
EK
Sbjct: 416 EEK 418
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 5/214 (2%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
TYN++M + ++G D + + D MG G PD L+ + + LL +
Sbjct: 75 TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134
Query: 142 --KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
KEV + V + L+ L + + Y F E PD + ++I G
Sbjct: 135 QGKEVRINSFV--YNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVG 192
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFLVY 258
+++A ++F M + G LP+V TYN++I G C A + C + KE++SR C+P+ + Y
Sbjct: 193 GVDRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTY 252
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++S +GK+ EA + M+ G ++++
Sbjct: 253 TSIISGFCKSGKMKEASNLFEEMMRSGIQPNVIT 286
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 4/233 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A + E ++S + +P ++N ++ I E +Y++M+ +
Sbjct: 260 CKSGKMKEASNLFEEMMRSGI---QPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCS 316
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
D++T+ ++ R G+++ + + M SP +TY +L++ L K ++ A +
Sbjct: 317 ADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDF 376
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L +K P + ++DG +AGN+D EM K C PD V +T++I +
Sbjct: 377 LGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCV 436
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK-EMESR 249
G + +A ++F+ M+ P+ T NS+I AG +EA + K +E R
Sbjct: 437 KGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDR 489
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 89/232 (38%), Gaps = 44/232 (18%)
Query: 107 GRSGFSPDFH-TYNILLHVLGKGDKPLAALNLLNHMK-EVGFDPSVLHFTTLMDGLSRAG 164
G S F PD T I V+ + + P L + + + + LM L + G
Sbjct: 28 GGSRFYPDRQLTPLIAFEVIKRFNNPKVGFKFLEFSRLNLNVNHCYSTYNLLMRSLCQMG 87
Query: 165 NLDACKYFFDEMANKGCMPD-----------------------------------VVCYT 189
+ D FD M + G +PD Y
Sbjct: 88 HHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKEVRINSFVYN 147
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + ++ +A LF + P+ +T+N +IRG C G D A + K+MES
Sbjct: 148 NLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAFEVFKDMESF 207
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK-------YIHLVSKF 294
GC P+ + YNTL++ L A ++ E+ + + + Y ++S F
Sbjct: 208 GCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISGF 259
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H +L + V+ ++ G P ++++N +M RLG LD+ RL + M
Sbjct: 126 FNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMH 185
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y + G+L++A DL D M KG P+ TY ++I
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 305
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G + A K M + +VY L+S L G+ +A +++R M+ G
Sbjct: 306 DGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVG 363
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ LA+ V + K + RP S+N +++ +
Sbjct: 114 ILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITK---WGLRPSVVSFNTLMNGYIR 170
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 171 LGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 230
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL GL + G+L DEM+
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMS 290
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G++E A + MI + + Y ++I G C G+
Sbjct: 291 MKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSV 350
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+A M++EM S G PN Y +++ G + ++++ M
Sbjct: 351 DAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEM 394
>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 576
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 146/295 (49%), Gaps = 13/295 (4%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E+G ++N+LI C GE+ A +V++R P +Y+A+L +L
Sbjct: 142 ESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM------GVSPNAATYDAVLCSLCDRG 195
Query: 60 QYK-LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K ++ + +Q+ + Y PD++T +++ A + + Q +L +EM G PD TY
Sbjct: 196 KLKQAMQVLGRQLQSKCY-PDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTY 254
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEMA 177
N+L+ KG + A+ L + G P V+ ++ L G +DA K M
Sbjct: 255 NVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMK-LLATML 313
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC+P VV + ++I G L KA ++ + M G PN ++N +I+GFC D
Sbjct: 314 RKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGID 373
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ M SRGC P+ + YN L++ L GK+ +A ++ + KG L+S
Sbjct: 374 RAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLIS 428
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 149/291 (51%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T++ ++C+ G++ A +V+ R ++SK + P + ++ A
Sbjct: 176 GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCY---PDVVTCTVLIDATCKESGV 232
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M ++G PD++TYN+++ + G+LD+ R L ++ G PD ++N++
Sbjct: 233 GQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMI 292
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L G + + A+ LL M G PSV+ F L++ L + G L + M G
Sbjct: 293 LRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGH 352
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ + +I + +++A + + M+++G P++ TYN ++ C GK D+A
Sbjct: 353 TPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVV 412
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ ++ S+GC+P+ + YNT++ L GK A E++ M KG L++
Sbjct: 413 ILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLIT 463
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 118/237 (49%), Gaps = 3/237 (1%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
A++ I + K + + + G D+ +YN+++ + G++++ R+LD M
Sbjct: 118 TALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRM-- 175
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G SP+ TY+ +L L K A+ +L + P V+ T L+D + +
Sbjct: 176 -GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQ 234
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
F+EM NKGC PDVV Y V+I + G L++A + + G P+V ++N ++R
Sbjct: 235 AMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILR 294
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C G++ +A ++ M +GC P+ + +N L++ L G L +A V+ M + G
Sbjct: 295 SLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHG 351
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 125/269 (46%), Gaps = 13/269 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M+ G + TFNILI C G +G A V+E K P S+N ++
Sbjct: 312 MLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK---HGHTPNSRSFNPLIQGFCN 368
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
G + IE++ + M G PDI+TYNI++ A + GK+D +L ++ G SP
Sbjct: 369 GKGIDRAIEYL-EIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLI 427
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+YN ++ L K K A+ LL M G P ++ T+++ GLSR G + FF +
Sbjct: 428 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL 487
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
P+ Y +IT + + A D M+ KG P TY ++I+G G
Sbjct: 488 KRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLA 547
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++A + E+ SRG LV +LV +
Sbjct: 548 EDASKLSNELYSRG-----LVKRSLVEKV 571
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N+LI C G + A + +++ + +P S+N IL +L
Sbjct: 242 MRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS---YGCQPDVISHNMILRSLCS 298
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK------------------- 95
++ + M +G P ++T+NI+ +C K LGK
Sbjct: 299 GGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRS 358
Query: 96 -------------LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+D+ L+ M G PD TYNILL L K K A+ +L+ +
Sbjct: 359 FNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLS 418
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G PS++ + T++DGL + G + +EM KG PD++ T ++ G++
Sbjct: 419 SKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVR 478
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A F + PN F YNS+I G C + + A + +M ++GC P Y TL+
Sbjct: 479 EAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLI 538
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ G +A ++ + +G
Sbjct: 539 KGITYEGLAEDASKLSNELYSRG 561
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
R G+L++ R L+ M G SPD L+ K + A ++ ++E G V
Sbjct: 91 RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMA----------------NKG--------------- 180
+ L+ G ++G ++ D M ++G
Sbjct: 151 SYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQS 210
Query: 181 -CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
C PDVV TV+I + + +A LF+ M KG P+V TYN +I+GFC G+ DEA
Sbjct: 211 KCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEA 270
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+K++ S GC P+ + +N ++ +L + G+ +A +++ M+ KG
Sbjct: 271 IRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKG 316
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G L+ F + M NKG PDV+ T +I + G + A + + G + +
Sbjct: 89 LIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVID 148
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V +YN +I G+C +G+ +EA ++ M G +PN Y+ ++ +L + GKL +A +V+
Sbjct: 149 VTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQVLG 205
Query: 280 HMVEKGKYIHLVS 292
++ Y +V+
Sbjct: 206 RQLQSKCYPDVVT 218
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 141/285 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N +I + G+ + E P SYN +L A L +
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + +M G P+ +TY+I++ + R G++D+ +L M +PD ++Y+
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A+ ++++M G P ++++ T++ L + GN + F+++ G
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+V Y MI++ + G+ +A + MI+KG P+ TYNS+I C G +EA
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +ME G P + YN ++ L ++ +A + M+EKG
Sbjct: 483 GLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG 527
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 123/230 (53%), Gaps = 2/230 (0%)
Query: 57 GIRQYKLIEWVYQQMS--DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
G +K IE + M + PD+ YN V+ ++ +++ ++L+ M GF PD
Sbjct: 122 GFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPD 181
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYNI++ L K AL +L+ + P+V+ +T L++ G ++ +
Sbjct: 182 IVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLE 241
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM +G +PD+ Y +I G +E+A +L + +KG P+V +YN ++R F G
Sbjct: 242 EMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQG 301
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
K+DE ++ EM SRGC PN + Y+ L+S+L G++ EA V++ M+EK
Sbjct: 302 KWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 351
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 7/235 (2%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ ++GY PD++ ++ + +++ R++ E+ S PD YN ++ K ++
Sbjct: 104 LVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQ 162
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AA +LN MK GF P ++ + ++ L L D++ CMP V+ YT+
Sbjct: 163 IEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTI 222
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I + I G + +A L + M+ +G LP+++TYN++IRG C G + A ++ + S+G
Sbjct: 223 LIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKG 282
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
C P+ + YN L+ N GK E +++ M +G Y L+S R+ R
Sbjct: 283 CEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGR 337
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 3/264 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C ++ A +V+ R K F P +YN ++ +L R+ L V Q+ +
Sbjct: 158 CKVNQIEAATQVLNRM---KARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCM 214
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++TY I++ A G +++ +LL+EM G PD +TYN ++ + K A L
Sbjct: 215 PTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAEL 274
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ + G +P V+ + L+ G D + EM ++GC P+ V Y+++I+S
Sbjct: 275 ITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCR 334
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +++A + MI K P+ ++Y+ +I C G+ D A +M M S GC P+ +
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 394
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHM 281
YNT+++ L G +A E+ +
Sbjct: 395 YNTILAALCKNGNANQALEIFNKL 418
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 139/292 (47%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
M GF T+NI+I C ++GLA V+++ + L N P +Y ++ A +
Sbjct: 173 MKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLL---LDNCMPTVITYTILIEATIV 229
Query: 57 --GIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
GI + KL+E +M G PD+ TYN ++ + G +++ L+ + G P
Sbjct: 230 EGGINEAMKLLE----EMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEP 285
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YNILL K L+ M G +P+ + ++ L+ L R G +D
Sbjct: 286 DVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVL 345
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M K PD Y +I++ G L+ A + D MI+ G LP++ YN+++ C
Sbjct: 346 KVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKN 405
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G ++A + ++ GC PN YNT++S L + G + A ++ M+ KG
Sbjct: 406 GNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKG 457
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
H++ F + H L++ +AG + YF + + NKG PDV+ T +I +
Sbjct: 70 HLQSYDFRET--HLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFK 127
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+EKA + + + + + P+VF YN++I GFC + + A ++ M++RG P+ + YN
Sbjct: 128 NIEKASRVMEILESHTE-PDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYN 186
Query: 260 TLVSNLRNAGKLAEAHEVIRHMV 282
++ +L N KL A V+ ++
Sbjct: 187 IMIGSLCNRRKLGLALTVLDQLL 209
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 138/283 (48%), Gaps = 5/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G F I+I GLA + ++ F + F +P YN +L ALL ++++I
Sbjct: 103 GISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMI 162
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y M +G ++ TYN+++ A + ++D +LL EM G PD +Y ++
Sbjct: 163 NGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSS 222
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + K A L M+ F P + L++G R ++ F+EMA +G PD
Sbjct: 223 MCRLGKVEEAREL--SMRIKSFVPV---YNALINGFCREHKMEEVFELFNEMAVEGIDPD 277
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ Y+ +I + G +E A + M +G PNV T+ S+++G+ M G+ EA +
Sbjct: 278 VITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWN 337
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
M G PN + YNTL+ L + GK+ EA V + M G +
Sbjct: 338 RMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVF 380
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 140/271 (51%), Gaps = 12/271 (4%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G+V AR++ R IKS F P YNA+++ R++K+ E ++ +M+ E
Sbjct: 223 MCRLGKVEEARELSMR-IKS----FVPV---YNALINGF--CREHKMEEVFELFNEMAVE 272
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G PD++TY+ V+ +G ++ +L +M G SP+ HT+ L+ G + A
Sbjct: 273 GIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEA 332
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L+L N M + G +P+ + + TL+ GL G + +M G P+ Y+ +I
Sbjct: 333 LDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDG 392
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ AG+L A ++++ MIT G LPNV Y M+ C F+ A +++ M + C PN
Sbjct: 393 FAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPN 452
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +NT + L +GK A +V+ M + G
Sbjct: 453 TITFNTFIKGLCCSGKTEWAMKVLNQMRQYG 483
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 7/261 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
LA + S F P +Y ++ L R I+++ Q M EG + + +
Sbjct: 55 LALHFFKSIANSNSFKHTPL--TYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFV 112
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
IV+ A R G +Q + +G G P YN +L L +K + N+MK
Sbjct: 113 IVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRD 172
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G + +V + L+ L + +DA + EM+ KGC+PD V YT +++S G++E+A
Sbjct: 173 GIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEA 232
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++L M K +P YN++I GFC K +E + EM G +P+ + Y+T+++
Sbjct: 233 REL--SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINT 287
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G + A V+ M +G
Sbjct: 288 LSEMGNVEMALAVLAKMFLRG 308
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 131/286 (45%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA-LLGIR 59
M G T++ +I T E+G + K L P +++ +++ +G R
Sbjct: 269 MAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGR 328
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ ++ ++ +M EG P+ + YN ++ GK+ + + +M R+G P+ TY+
Sbjct: 329 LCEALD-LWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYS 387
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K + A + N M G P+V+ +T ++D L R + + + MAN
Sbjct: 388 TLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANG 447
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
C P+ + + I +G+ E A + + M G PNV TYN ++ G A + EA
Sbjct: 448 NCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREA 507
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ E+E N + YNT++S +AG A ++ ++ G
Sbjct: 508 LQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGG 553
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M++ P+ +T+N + GK + ++L++M + G +P+ TYN +L L
Sbjct: 442 ENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNA 501
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL ++ ++E+ +++ + T++ G AG ++ G PD + Y
Sbjct: 502 KRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITY 561
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQ-LPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+I +Y GE++ A L D + KG+ P+VFTY S++ G C DEA + +M
Sbjct: 562 NTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMI 621
Query: 248 SRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKGK 286
+ G PN +N LV L G L H ++ +++ GK
Sbjct: 622 NEGICPNRATWNALVRGLFSKLGHLGPIH-IVDNILANGK 660
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 125/289 (43%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G +N LI C+ G++ A V ++ ++ +F P + +Y+ ++
Sbjct: 339 MIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVF---PNETTYSTLIDGFAK 395
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +M G P+++ Y ++ R + L++ M P+ T
Sbjct: 396 AGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTIT 455
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N + L K A+ +LN M++ G P+V + ++DGL A E+
Sbjct: 456 FNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIE 515
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++V Y +++ + AG + A + ++ G P+ TYN++I +C G+
Sbjct: 516 EMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVK 575
Query: 238 EACTMMKEMESRGCN-PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ + +G P+ Y +L+ + N + EA + M+ +G
Sbjct: 576 TAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEG 624
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 70/165 (42%), Gaps = 3/165 (1%)
Query: 124 VLGKGDKPLA--ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+L K KPL LN +N ++ D ++L + +++ L N+ +FF +AN
Sbjct: 9 LLLKKQKPLVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNS 68
Query: 182 MPDV-VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ YT MI +++ Q L M +G N + +I + AG ++A
Sbjct: 69 FKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQAL 128
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ GC P+ +YN ++ L + K + + +M G
Sbjct: 129 KTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDG 173
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 133/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI GL + E +P +YNAI++ L +
Sbjct: 123 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 182
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y + V +M G +PD TYNI++ R + R+ DEM G PD +++
Sbjct: 183 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +L K AL MK G P + +T L+ G R G + DEM +G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+ DVV Y ++ L +A +LF M +G P+ +T+ ++I G+ G ++A
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
T+ + M R P+ + YNTL+ ++ + +E+ M+ + Y + +S
Sbjct: 363 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 414
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 3/267 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G V LA ++ + ++S + + + N +++AL ++ + + M ++G PD+
Sbjct: 76 GWVDLAWEIYQEVVRSGV---QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 132
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ A R G L++ L+D M G P TYN +++ L K K L A +L+
Sbjct: 133 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 192
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M ++G P + L+ R N+ + FDEM ++G +PD+V ++ +I G
Sbjct: 193 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 252
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A F M G P+ Y +I GFC G EA + EM +GC + + YNT
Sbjct: 253 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 312
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+++ L L+EA E+ M E+G +
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVF 339
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ M + G APD + Y I++ R G + + ++ DEM G D TYN +L+ L K
Sbjct: 260 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 319
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A L M E G P FTTL++G S+ GN++ F+ M + PDVV
Sbjct: 320 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 379
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I + E+EK +L++ MI++ PN +Y +I G+C G EA + EM
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 439
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + NT+V AG +A E + +M+ KG
Sbjct: 440 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 477
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN IL+ L + + ++ +M++ G PD T+ ++ + G +++ L + M
Sbjct: 309 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ PD TYN L+ KG + L N M P+ + + L++G G +
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 428
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+DEM KG ++ ++ Y AG KA + M+ KG +P+ TYN++
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GF D A ++ +ME+ G P+ + YN +++ G++ EA ++ M+E+G
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFN-ILICTCGEVGLAR------KVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G T+N IL C E L+ ++ ER + + F N Y+ +
Sbjct: 298 MLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGN 357
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ +++ M PD++TYN ++ + ++++ + L ++M P
Sbjct: 358 MNKAVT-------LFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ +Y IL++ A L + M E GF+ +++ T++ G RAGN F
Sbjct: 411 NHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFL 470
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M KG +PD + Y +I +I +++A L + M G LP+V TYN ++ GF
Sbjct: 471 SNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQ 530
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ EA +M +M RG NP+ Y +L++ L EA V M+++G
Sbjct: 531 GRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRG 582
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 113/239 (47%), Gaps = 6/239 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +M ++G D++TYN ++ + L + L EM G PDF+T+ L++
Sbjct: 294 VRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYS 353
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L M + P V+ + TL+DG + ++ +++M ++ P+ +
Sbjct: 354 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 413
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I Y G + +A L+D M+ KG + T N++++G+C AG +A + M
Sbjct: 414 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 473
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+G P+ + YNTL++ + A ++ M G Y +++ F R R
Sbjct: 474 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGR 532
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TF LI + G K V F N +P +YN ++ +
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ M P+ ++Y I++ +G + + RL DEM GF T N
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + + A L++M G P + + TL++G + N+D ++M N G
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 512
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PDV+ Y V++ + G +++A+ + MI +G P+ TY S+I G EA
Sbjct: 513 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 572
Query: 241 TMMKEMESRGCNPN 254
+ EM RG P+
Sbjct: 573 RVHDEMLQRGFVPD 586
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 105/239 (43%), Gaps = 8/239 (3%)
Query: 57 GIRQYKLIEWVYQQMSDEGYAP---DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G+ + +++E + + G P D+L V K R G + R+L G
Sbjct: 6 GVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGC--EAFRVLKS---KGLCV 60
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ N LL L K A + + G +V +++ L + ++ K F
Sbjct: 61 SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFL 120
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M KG PDVV Y +I +Y G LE+A +L D M KG P VFTYN++I G C
Sbjct: 121 SDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKT 180
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
GK+ A ++ EM G +P+ YN L+ + +A + M +G LVS
Sbjct: 181 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 239
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 135/284 (47%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+ P +A TF+ILI + G+ + ++ ++Y AI++ L ++
Sbjct: 216 VRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKI 275
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + ++++ G P I TYN ++ ++G+L++ LL ++ +G +PD TY L
Sbjct: 276 QEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL 335
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ LGK + A L M G + +T L+ GL + G + + M + GC
Sbjct: 336 IDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGC 395
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+PDVV + MI AG + A +F M +G PN Y+++I G C A K D A
Sbjct: 396 VPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALE 455
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ +M+ C P+ + YN L+ L +G + A M+E G
Sbjct: 456 MLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 499
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 130/275 (47%), Gaps = 13/275 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL----L 56
+ NG T T+N L+ ++G + ++ K P +Y +++ L
Sbjct: 285 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 344
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
YKL +++M+ G A D + Y ++ + GK+ Q + M G PD
Sbjct: 345 SFEAYKL----FKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVV 400
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T + ++ L K + AA+ + M+ G P+ + ++ L+ GL +A +D +M
Sbjct: 401 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 460
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
C PD + Y ++I +G++E A+ FD M+ G P+V+TYN +I G C AG
Sbjct: 461 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNT 520
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
D AC ++ +M S + VY++LV L +GKL
Sbjct: 521 DAACGVLDDMSS-----SRFVYSSLVDGLCKSGKL 550
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDE-GYAPDILTYNIVMCAKYRLGK---- 95
FRP ++N ++ R+ + V ++M ++ G AP + T+N+V+ + GK
Sbjct: 150 FRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209
Query: 96 LDQF------------------------------HRLLDEMGRSGFSPDFHTYNILLHVL 125
+D F H L E +G + D HTY +++ L
Sbjct: 210 MDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWL 269
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K K A+ L+ + G P++ + L++GL + G L+ ++ + GC PDV
Sbjct: 270 AKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDV 329
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V YT +I +A LF M ++G + Y ++IRG GK +A ++ K
Sbjct: 330 VTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKT 389
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC P+ + +T++ L AG++ A + + M +G
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 136/292 (46%), Gaps = 9/292 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T + +I + G V F + P + Y+A++H L R+
Sbjct: 390 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 449
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM PD +TYNI++ + G ++ DEM +G PD +TYNI
Sbjct: 450 MDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNI 509
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K AA +L+ M F +++L+DGL ++G L+ F EM G
Sbjct: 510 LISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSG 564
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + T +I A +++A LF+ + +G +P+ + YNS+I +GK +E
Sbjct: 565 -VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQ 622
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM +R P+ + YN L++ + A ++ AH M +G Y+ VS
Sbjct: 623 AVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG-YVPPVS 672
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 120/282 (42%), Gaps = 37/282 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDE--GYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
S +A++ ++ L ++Q +S G+ + T N ++ R + + LL
Sbjct: 84 STDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLK 143
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE-VGFDPS------VLH----- 152
+ F PD T+N+L+ +P A ++ M+E G PS VLH
Sbjct: 144 NELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKS 203
Query: 153 -----------------------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
F+ L++GL +AG + E GC D+ YT
Sbjct: 204 GKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYT 263
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ ++++A L + + G P + TYN+++ G C G+ +EA +++++
Sbjct: 264 AIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 323
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
GC P+ + Y +L+ L + EA+++ + M +G + V
Sbjct: 324 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTV 365
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 138/291 (47%), Gaps = 10/291 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKS--KLFNFRPFKNSYNAILHAL 55
+ E G T+N LI C G V A +++ + K+ F + N +L+ L
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF-----TLNTVLYNL 464
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++Y+ E + G+ PD ++Y VM A ++ + RL D+M P
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ L + ++ A++ LN + E G P + ++ + G+L+ F ++
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNK 584
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PDVV ++ G+L+KA LF+ + KG+ +V TYN++I+ C G
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
D A +ME +G P+ YN ++S L AG+ EAH ++ + + GK
Sbjct: 645 VDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 143/294 (48%), Gaps = 8/294 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C G +G AR ++ R K P + +YN ++ A +
Sbjct: 238 GLSPDAVTYNTLLNAHCRKGMLGEARALLARM---KRDGIAPTQPTYNTLVSAFARLGWI 294
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR-SGFSPDFHTYNI 120
K V + M+ G+ PD+ TYN++ + GK+D+ RL DEM R S PD TYN
Sbjct: 295 KQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNT 354
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K AL LL M++ G P+++ ++ L + G L+ +++A +G
Sbjct: 355 LVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG 414
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y +I +Y AG + KA L D M+ KG + FT N+++ C ++++A
Sbjct: 415 LAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAE 474
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
++ RG P+ + Y T+++ A + M+E+ K I +S +
Sbjct: 475 ELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER-KLIPSISTY 527
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 131/275 (47%), Gaps = 1/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN+L+ T G + + F P +YN +L+A + +M
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G AP TYN ++ A RLG + Q ++++ M GF PD TYN+L L + K
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKV 329
Query: 132 LAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L + M+ + P V+ + TL+D + +EM +KG P +V + +
Sbjct: 330 DEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNI 389
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ S G+LE+A + + +G P+V TYN++I +C AG +A T+M EM +G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ NT++ NL + +A E++ ++G
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 137/325 (42%), Gaps = 48/325 (14%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T T+N L+ +G ++ + + F P +YN + +G+ Q
Sbjct: 269 MKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA---VGLCQ 325
Query: 61 YKLIEWVYQQMSDE-----GYAPDILTYNIVM--CAKYRLGKLDQFHRLLDEMGRSGFSP 113
++ ++ + DE PD++TYN ++ C K+R D RLL+EM G P
Sbjct: 326 AGKVDEAFR-LKDEMERLSTALPDVVTYNTLVDACFKWRCSS-DAL-RLLEEMRDKGVKP 382
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
T+NI++ L K K AL L + E G P V+ + TL+D +AGN+
Sbjct: 383 TLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLM 442
Query: 174 DEMANKGC-----------------------------------MPDVVCYTVMITSYIAA 198
DEM KG +PD V Y ++ +Y
Sbjct: 443 DEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKE 502
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
E A L+D MI + +P++ TYN++I+G C + EA + E+ +G P+ Y
Sbjct: 503 YNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTY 562
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVE 283
N ++ G L A MVE
Sbjct: 563 NIIIHAYCKEGDLENAFRFHNKMVE 587
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 17/285 (5%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A ++ ++ I+ KL P ++YN ++ L + + K ++ ++G PD TYNI
Sbjct: 508 ALRLWDQMIERKLI---PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNI 564
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL---GKGDKPLAALNLLNHMK 142
++ A + G L+ R ++M + F PD T N L++ L GK DK AL L
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK---ALKLFESWV 621
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G V+ + TL+ + + G++D +FFD+M KG PD Y V++++ AG E
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL-VYNTL 261
+A ++ + G+L F + E + S N L Y
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF-KRYKR 299
++ L G+L EA V+ M++KG YI L+ KR KR
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKR 786
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 99/225 (44%), Gaps = 11/225 (4%)
Query: 75 GYAPDILTYNIVMCAKYR------LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
G P + N V+ A R LD F L++ P+ +T+N+L+H
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELR----LHPNHYTFNLLVHTHCSK 221
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL L+ M+ G P + + TL++ R G L + M G P Y
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++++ G +++A + + M G P++ TYN + G C AGK DEA + EME
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMER 341
Query: 249 RGCN-PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + YNTLV ++A ++ M +KG LV+
Sbjct: 342 LSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVT 386
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 122/238 (51%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG L++ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ FTY ++I
Sbjct: 265 LAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD Y +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+++LI C ++ A ++ + + L P ++ ++
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLI---PNGVTFTTLIDGHCK 259
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y+QM + PD++TYN ++ + G L Q H L+DEM G PD T
Sbjct: 260 NGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A M + + +T L+ GL + G + EM
Sbjct: 320 YXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ G PD YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 380 SVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 145/292 (49%), Gaps = 6/292 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T NI+I C C + A V+ + +K + P ++N ++ L +
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK---LGYEPDTTTFNTLIKGLFLEGK 173
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G PD++TYN ++ R G LL +M D TY+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + AA++L M+ G SV+ + +L+ GL +AG + +M ++
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ + V++ ++ G+L++A +L+ MIT+G PN+ TYN+++ G+CM + EA
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ M C+P+ + + +L+ ++ + +V R++ ++G + V+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+ENG T+N + IC G+ LA RK+ ER +K+ +F +Y+ I+
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF-------TYSTIID 236
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L ++++M +G ++TYN ++ + GK + LL +M P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+N+LL V K K A L M G P+++ + TLMDG L
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M C PD+V +T +I Y ++ +F + +G + N TY+ +++GFC +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GK A + +EM S G P+ + Y L+ L + GKL +A E+ +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 135/258 (52%), Gaps = 2/258 (0%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + ++ A+ +Q+ L+ +Q+ G A +I T NI++ R
Sbjct: 78 EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 137
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K + +L ++ + G+ PD T+N L+ L K A+ L++ M E G P V+ +
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++++G+ R+G+ +M + DV Y+ +I S G ++ A LF M TK
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +V TYNS++RG C AGK+++ ++K+M SR PN + +N L+ GKL EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 275 HEVIRHMVEKGKYIHLVS 292
+E+ + M+ +G ++++
Sbjct: 318 NELYKEMITRGISPNIIT 335
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+N L+ C + A +++ +++K P ++ +++
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC---SPDIVTFTSLIKGYCM 380
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ V++ +S G + +TY+I++ + GK+ L EM G PD T
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K AL + +++ D ++ +TT+++G+ + G ++ F +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ YTVMI+ G L +A L M G PN TYN++IR G
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 560
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +++EM+S G + + ++ L +A K +R+ + KG
Sbjct: 561 ASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK----RLTLRYCLSKG 604
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 162 RAGNLDACK----YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
R+G +D K F EM +P +V ++ ++ + D + G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
N++T N MI FC K A +++ ++ G P+ +NTL+ L GK++EA +
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 278 IRHMVEKG 285
+ MVE G
Sbjct: 181 VDRMVENG 188
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 121/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K +K A L + M P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ TY ++I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D ++L DEM P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 145/279 (51%), Gaps = 4/279 (1%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGIRQY-KLIEWVY 68
+ F ++ G+ L K V+ F + F + S+N++L+ ++ + + +E+
Sbjct: 126 KCFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYN 185
Query: 69 QQMSDEGYA--PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ +G + P++LT+N+V+ A ++G +D ++ +M PD +TY L+ L
Sbjct: 186 HVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLC 245
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K D+ A++LL+ M+ G PS + F L++GL + G+L D M KGC+P+ V
Sbjct: 246 KADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEV 305
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I G+LEKA L D M++ +PNV TY ++I G G+ + ++ M
Sbjct: 306 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALM 365
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E RG N VY+TL+S L GK EA + + M KG
Sbjct: 366 EERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKG 404
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 9/288 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVER-FIKSKLFNFRPFKNSYNAILHALLG 57
I+ FP+ TFN+LI C G++ A K+V+ F+K + P + +YN ++H L
Sbjct: 262 IDGCFPSPV-TFNVLINGLCKKGDLSRAAKLVDNMFLKGCI----PNEVTYNTLIHGLCL 316
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M P+++TY ++ + G+ +L M G+ + +
Sbjct: 317 KGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYV 376
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L K K A++L M G++ + + ++ ++DGL R G D EM
Sbjct: 377 YSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT 436
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKGC P+ + ++ + AG +A +++ M N Y+ +I G C GK
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M +GC P+ + Y+++++ L AG + +A ++ M+ +G
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQG 544
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 133/280 (47%), Gaps = 3/280 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T ++FN ++ + GL + +E + I +K + P ++N ++ A+ +
Sbjct: 160 TGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAI 219
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V++ M+ PD+ TY +M + ++D+ LLDEM G P T+N+L++ L
Sbjct: 220 QVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGL 279
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K A L+++M G P+ + + TL+ GL G L+ D M + C+P+V
Sbjct: 280 CKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNV 339
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I + G + M +G N + Y+++I G GK EA + KE
Sbjct: 340 VTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKE 399
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M +G N +VY+ ++ L GK +A EV+ M KG
Sbjct: 400 MTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKG 439
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 43/295 (14%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH--------------- 53
T+N LI C G++ A +++R + SK P +Y I++
Sbjct: 306 TYNTLIHGLCLKGKLEKAISLLDRMVSSKCV---PNVVTYGTIINGLVKQGRALDGACVL 362
Query: 54 ALLGIRQYKLIEWVY--------------------QQMSDEGYAPDILTYNIVMCAKYRL 93
AL+ R Y + E+VY ++M+ +GY + + Y+ V+ R
Sbjct: 363 ALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRD 422
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK D +L EM G +P+ +T + L+ + A+ + M + F + + +
Sbjct: 423 GKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCY 482
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ L+ GL + G + + +M KGC PDVV Y+ MI AG +E A L++ M+
Sbjct: 483 SVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLC 542
Query: 214 KG--QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+G P+V TYN ++ C A ++ M RGC+P+ + + LR
Sbjct: 543 QGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLR 597
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G A T + L+ E G + + VE + NF + Y+ ++H L +
Sbjct: 435 MTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGK 494
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG--FSPDFHTY 118
K V+ QM +G PD++ Y+ ++ G ++ +L +EM G PD TY
Sbjct: 495 VKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTY 554
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
NILL+ L K A++LLN M + G DP ++ T +
Sbjct: 555 NILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFL 593
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 43/313 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NILI C ++ LA ++ + +K + P + +++L+ ++ +
Sbjct: 84 TYNILINCFCRRSQISLALALLGKMMK---LGYEPSIVTLSSLLNGYCHGKRISDAVALV 140
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK- 127
QM + GY PD +T+ ++ + K + L+D M + G P+ TY ++++ L K
Sbjct: 141 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
GD L ALNLLN M+ + V+ F T++D L + ++D F EM KG P+VV
Sbjct: 201 GDTDL-ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 259
Query: 188 YTVMIT-----------------------------------SYIAAGELEKAQDLFDGMI 212
Y+ +I+ +++ G+ +A+ L+D MI
Sbjct: 260 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 319
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ P++FTYNS++ GFCM + D+A M + M S+ C P+ + YNTL+ + ++
Sbjct: 320 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 379
Query: 273 EAHEVIRHMVEKG 285
+ E+ R M +G
Sbjct: 380 DGTELFREMSHRG 392
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++ LI C+ G A +++ I+ K+ P ++NA++ A +
Sbjct: 248 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI---NPNLVTFNALIDAFVK 304
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E +Y M PDI TYN ++ +LD+ ++ + M PD T
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 364
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + L M G + +TTL+ GL G+ D + F +M
Sbjct: 365 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD++ Y++++ G+LEKA ++FD M +++ Y +MI G C AGK D
Sbjct: 425 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 484
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + +G PN + YNT++S L + L EA+ +++ M E G
Sbjct: 485 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 532
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ +++ C G+ LA ++ + +K+ +N I+ +L
Sbjct: 178 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI---EADVVIFNTIIDSLCK 234
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++++M +G P+++TY+ ++ G+ +LL +M +P+ T
Sbjct: 235 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 294
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ K K + A L + M + DP + + +L++G LD K F+ M
Sbjct: 295 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 354
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PDVV Y +I + + +E +LF M +G + + TY ++I+G G D
Sbjct: 355 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 414
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G P+ + Y+ L+ L N GKL +A EV +M
Sbjct: 415 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 458
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TFN LI G+ A K+ + IK + P +YN++++
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI---DPDIFTYNSLVNGFCM 339
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + PD++TYN ++ + +++ L EM G D T
Sbjct: 340 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 399
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L A + M G P ++ ++ L+DGL G L+ FD M
Sbjct: 400 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 459
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
D+ YT MI AG+++ DLF + KG PNV TYN+MI G C
Sbjct: 460 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 519
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA ++K+M+ G PN YNTL+ ++LR+ K A A E+IR M
Sbjct: 520 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA-ELIREM 563
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TF LI V L ++V+R + L +Y +++
Sbjct: 143 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV-------TYGVVVN 195
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + +M D++ +N ++ + + +D L EM G P
Sbjct: 196 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 255
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+ L+ L + A LL+ M E +P+++ F L+D + G + +
Sbjct: 256 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 315
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M + PD+ Y ++ + L+KA+ +F+ M++K P+V TYN++I+GFC +
Sbjct: 316 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 375
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ + +EM RG + + Y TL+ L + G A +V + MV G
Sbjct: 376 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 427
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RP + +N +L A+ ++++ ++ + ++M + TYNI++ R ++
Sbjct: 42 RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 101
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL +M + G+ P T + LL+ G + A+ L++ M E+G+ P + FTTL+ G
Sbjct: 102 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 161
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L D M +GC P++V Y V++ G+ + A +L + M +
Sbjct: 162 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 221
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V +N++I C D+A + KEME++G PN + Y++L+S L + G+ ++A +++
Sbjct: 222 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 281
Query: 280 HMVEKGKYIHLVS 292
M+EK +LV+
Sbjct: 282 DMIEKKINPNLVT 294
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T+N L+ C + A+++ E + F P +YN ++
Sbjct: 318 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF---PDVVTYNTLIKGFCK 374
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G D +TY ++ + G D ++ +M G PD T
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 434
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K AL + ++M++ + +TT+++G+ +AG +D F ++
Sbjct: 435 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 494
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+VV Y MI+ + L++A L M G LPN TYN++IR G
Sbjct: 495 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 554
Query: 238 EACTMMKEMES 248
+ +++EM S
Sbjct: 555 ASAELIREMRS 565
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G P T++IL+ C G++ A +V + KS++ + Y ++ +
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI---KLDIYIYTTMIEGMCK 479
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ ++ +S +G P+++TYN + +C+K RL L + + LL +M G P+
Sbjct: 480 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK-RL--LQEAYALLKKMKEDGPLPN 536
Query: 115 FHTYNILLHV-LGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKY 171
TYN L+ L GDK A+ L+ M+ F D S + L+ + G LD K
Sbjct: 537 SGTYNTLIRAHLRDGDKA-ASAELIREMRSCRFVGDASTI---GLVANMLHDGRLD--KS 590
Query: 172 FFDEMA 177
F D ++
Sbjct: 591 FLDMLS 596
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 55/120 (45%)
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD F M +P +V + ++++ + + L + M + ++TYN
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I FC + A ++ +M G P+ + ++L++ + ++++A ++ MVE G
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 16/290 (5%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ ILI + +VGL + F + + P +Y A+LHA L +Q ++ +M
Sbjct: 492 TYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRM 551
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRS---------------GFSPDF 115
D G AP+ +TY+ ++ + G+ + + +M G S +P+
Sbjct: 552 VDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNV 611
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L+ L K K + A LL+ M G +P+ + + L+DG + G LD + F
Sbjct: 612 VTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFR 671
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ G +P V YT +I + L+ A + M+ PNV TY +MI G C G+
Sbjct: 672 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGE 731
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ ME RGCNPN + Y +L+ L +GK+ + ++ M+ +G
Sbjct: 732 CQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 117/240 (48%), Gaps = 18/240 (7%)
Query: 63 LIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
L E VY++M + + T N C +GK D+ +++ M R GF PD TY+ +
Sbjct: 403 LAEKVYEEMLASSCVLNKVNTANFARCL-CGMGKFDKAFQIIKLMMRKGFVPDTSTYSKV 461
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L + K A L MK VG P V +T L+D + G ++ + +FDEM + GC
Sbjct: 462 ITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGC 521
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV YT ++ +Y+ ++ +A D+F M+ G PN TY++++ G C AG+ +AC
Sbjct: 522 SPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACE 581
Query: 242 MMKEMESRGCN----------------PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M N PN + Y L+ L A K+ +A E++ M G
Sbjct: 582 VYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNG 641
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 134/246 (54%), Gaps = 2/246 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y+A++ + + + V+ +MS GY P + TY ++ A ++ +LD ++L +M
Sbjct: 649 YDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQML 708
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
S +P+ TY ++ L + + AL LL+ M++ G +P+V+ +T+L+DGL ++G +D
Sbjct: 709 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVD 768
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
F +M +GC P+ V Y V+I AAG L++A L M V Y S++
Sbjct: 769 MSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVV 828
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+GF + KF + +++E+ES G VY L+ + AG+L +A E+ + M+E
Sbjct: 829 QGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSS 886
Query: 288 IHLVSK 293
+++ SK
Sbjct: 887 LNITSK 892
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 134/306 (43%), Gaps = 28/306 (9%)
Query: 5 GFPTTARTFNILI---CTCGEV------GLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
G P +NI I C+ E+ LA KV E + S + N+ N L
Sbjct: 374 GCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNK--VNTAN-FARCL 430
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
G+ ++ + + M +G+ PD TY+ V+ K+++ L EM G PD
Sbjct: 431 CGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDV 490
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+TY IL+ K A + + M+ VG PSV+ +T L+ + + F
Sbjct: 491 YTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHR 550
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI----------------TKGQLPN 219
M + GC P+ + Y+ ++ AGE +KA +++ MI T PN
Sbjct: 551 MVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPN 610
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY ++I G C A K +A ++ M S GC PN ++Y+ L+ GKL A EV
Sbjct: 611 VVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFF 670
Query: 280 HMVEKG 285
M + G
Sbjct: 671 RMSKCG 676
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 134/321 (41%), Gaps = 36/321 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG ++ LI +VG E F + + P ++Y +++ A+ R+
Sbjct: 637 MSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRR 696
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L V QM + P+++TY ++ R+G+ + +LL M + G +P+ TY
Sbjct: 697 LDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTS 756
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC----------- 169
L+ LGK K +L L M G P+ + + L++ AG LD
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 816
Query: 170 --KY--------------------FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
KY +E+ + G + Y ++I S+ AG LEKA +L
Sbjct: 817 WPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALEL 876
Query: 208 FDGMITKGQLPNVF---TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
M+ N+ TY S+I+ C+A + ++A + E+ +G P + L+
Sbjct: 877 HKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKG 936
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L K EA ++ M ++G
Sbjct: 937 LIKVNKWNEALQLCYSMCDEG 957
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 119/289 (41%), Gaps = 9/289 (3%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E+ R N+++ C G K +E + K F +RP +YNA++ L Q
Sbjct: 165 EDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMD 224
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V ++MS+ G+ D T V C L K ++ L + R F D ++
Sbjct: 225 MGFRVQKEMSELGFCTDKFT---VGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMI 281
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + A++ L+ M+ P+V+ + TL+ G + L CK M N+GC
Sbjct: 282 SGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCN 341
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE---- 238
P+ + ++ SY A + A L + M G P YN I C +
Sbjct: 342 PNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLL 401
Query: 239 --ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +EM + C N + L GK +A ++I+ M+ KG
Sbjct: 402 ALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKG 450
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 10/237 (4%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P TYN ++ G++D R+ EM GF D T L K
Sbjct: 197 RLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEG 256
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AL ++ F + T ++ GL A D F M C+P+VV Y
Sbjct: 257 RWSDALVMIERED---FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 313
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ ++ +L + + M+ +G PN +NS++ +C A + A ++ M
Sbjct: 314 TLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGC 373
Query: 250 GCNPNFLVYNTLVSN------LRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
GC P ++VYN + + L + LA A +V M+ ++ V+ + RC
Sbjct: 374 GCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNT-ANFARC 429
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 11/258 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+ T+ +I C GE A K++ K P +Y +++ L
Sbjct: 707 MLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKR---GCNPNVVTYTSLIDGLGK 763
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ QM +G AP+ +TY +++ G LD+ H LL EM ++ +
Sbjct: 764 SGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQG 823
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ G K +A+L LL ++ G + L+D S+AG L+ EM
Sbjct: 824 YCSVVQ--GFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMM 881
Query: 178 NKGCMPDVVC---YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ YT +I + A +LEKA +L+ + KG +P + + +I+G
Sbjct: 882 EVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVN 941
Query: 235 KFDEACTMMKEMESRGCN 252
K++EA + M G N
Sbjct: 942 KWNEALQLCYSMCDEGVN 959
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 145/292 (49%), Gaps = 6/292 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T NI+I C C + A V+ + +K + P ++N ++ L +
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK---LGYEPDTTTFNTLIKGLFLEGK 173
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G PD++TYN ++ R G LL +M D TY+
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 233
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + AA++L M+ G SV+ + +L+ GL +AG + +M ++
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ + V++ ++ G+L++A +L+ MIT+G PN+ TYN+++ G+CM + EA
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ M C+P+ + + +L+ ++ + +V R++ ++G + V+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+ENG T+N + IC G+ LA RK+ ER +K+ +F +Y+ I+
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF-------TYSTIID 236
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L ++++M +G ++TYN ++ + GK + LL +M P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+N+LL V K K A L M G P+++ + TLMDG L
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M C PD+V +T +I Y ++ +F + +G + N TY+ +++GFC +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GK A + +EM S G P+ + Y L+ L + GKL +A E+ +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 135/258 (52%), Gaps = 2/258 (0%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + ++ A+ +Q+ L+ +Q+ G A +I T NI++ R
Sbjct: 78 EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 137
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K + +L ++ + G+ PD T+N L+ L K A+ L++ M E G P V+ +
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 197
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++++G+ R+G+ +M + DV Y+ +I S G ++ A LF M TK
Sbjct: 198 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +V TYNS++RG C AGK+++ ++K+M SR PN + +N L+ GKL EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 275 HEVIRHMVEKGKYIHLVS 292
+E+ + M+ +G ++++
Sbjct: 318 NELYKEMITRGISPNIIT 335
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 36/193 (18%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++ + KL E ++Q+M G PD++TY I++ GKL++ + +++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 107 GRS-----------------------------------GFSPDFHTYNILLHVLGKGDKP 131
+S G P+ TY +++ L K
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A LL M+E G P+ + TL+ R G+L A +EM + G D M
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK-M 583
Query: 192 ITSYIAAGELEKA 204
+ + +GEL+K+
Sbjct: 584 VIDMLLSGELDKS 596
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+ IL+ C G++ A ++ E KSK+ Y I+ +
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM---YTTIIEGMCK 485
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ + +G P+++TY +++ + G L + + LL +M G +P+ T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + A+ L+ MK GF ++D L +G LD K F D ++
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELD--KSFLDMLS 602
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 162 RAGNLDACK----YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
R+G +D K F EM +P +V ++ ++ + D + G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
N++T N MI FC K A +++ ++ G P+ +NTL+ L GK++EA +
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 180
Query: 278 IRHMVEKG 285
+ MVE G
Sbjct: 181 VDRMVENG 188
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 142/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N LI C + AR+++E +K K+ RP +YN +++
Sbjct: 199 MSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKV---RPNLVTYNTLIYGYCK 255
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
L + ++M G PD++T+N ++ + K+D+ +L M + +P+ T
Sbjct: 256 TGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVT 315
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+ L + A LL+ M G P ++ + +L+ R ++ + M
Sbjct: 316 YNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMV 375
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +PD + Y + + + + ++A L D M G +PN+FT+NS++ G C + + D
Sbjct: 376 ERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLD 435
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ M GC+P Y LV+ L AG++ +A EV+ MV +G
Sbjct: 436 EARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEG 483
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 2/216 (0%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M + G++PD++T++ ++ A G L + + E +PD +NIL+H L K +
Sbjct: 130 EMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVEC--APDSVLFNILVHGLCKAN 187
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A ++ M E G P V+ + +L+DGL ++ ++ + + M + P++V Y
Sbjct: 188 QLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYN 247
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I Y G A L + MI G P+V T+NS+I GFC K D+AC ++ M+
Sbjct: 248 TLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKG 307
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PN + YN L+S L +AG+ EA E++ M +G
Sbjct: 308 LCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRG 343
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 133/274 (48%), Gaps = 2/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI + G + + + K P ++++I+ AL +++
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ APD + +NI++ + +L + ++++EM G PD TYN L+ L K +
Sbjct: 167 VE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A LL M + P+++ + TL+ G + G + M G PDVV + +
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I+ + +++KA ++ M PN+ TYN +I G C AG+ +EAC ++ EM+ RG
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YN+L+ ++ +A ++ MVE+G
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERG 378
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 6/246 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLD 104
+N ++H L Q + ++MS+ G PD++TYN + +C YR+ ++ +LL+
Sbjct: 176 FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM---EEARQLLE 232
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
M + P+ TYN L++ K A L+ M + G P V+ F +L+ G +
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D M C P++V Y V+I+ AG +A +L M +G LP++ TYN
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I FC + ++A + M RG P+ + Y TL L + + EA ++ +M +
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412
Query: 285 GKYIHL 290
G +L
Sbjct: 413 GAIPNL 418
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 2/176 (1%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ K A LL MKE G P V+ ++++ L GNL +F E
Sbjct: 107 TYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRES 166
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
C PD V + +++ A +L +A+ + + M +G +P+V TYNS+I G C + +
Sbjct: 167 VE--CAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+EA +++ M R PN + YNTL+ G AH++I M++ G + +V+
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVT 280
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 6/262 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G GLA +++ER I+S P ++N+++ + V
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQS---GTHPDVVTFNSLISGFCQKSKIDKACEVL 301
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M AP+++TYN+++ G+ ++ LL EM G PD TYN L+ + +
Sbjct: 302 HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRN 361
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + N M E G P + + TL L ++ D D M + G +P++ +
Sbjct: 362 FQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTF 421
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + L++A+ L M G P TY ++ G C AG+ D+A ++ M S
Sbjct: 422 NSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVS 481
Query: 249 RGCNPNFLVYNTLVSNLRNAGK 270
G P T+V L GK
Sbjct: 482 EGIQPLVSSSGTIVHTLAREGK 503
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 9/272 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G TFN LI C ++ A +V+ +K L P +YN ++ L
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLH-LMKKGLCA--PNLVTYNVLISGLCD 325
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G PDI+TYN ++ R +++Q ++ + M G PD +
Sbjct: 326 AGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGIS 385
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L L K ++ A LL++M + G P++ F +LM+GL + LD ++ M
Sbjct: 386 YCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMR 445
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC P Y V++T AG ++ A+++ M+++G P V + +++ GK D
Sbjct: 446 RVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQD 505
Query: 238 EACTMMKEM---ESRGCNPNFLVYNTLVSNLR 266
A ++ ES+ C+P++ V LR
Sbjct: 506 LALHYFDQVVAAESKACDPSYQKLLEFVKVLR 537
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + F DE+ + C + + Y +I + AG++E+A L M +G P+V T++S++
Sbjct: 88 AYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIV 147
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C G A M ES C P+ +++N LV L A +L+EA ++I M E+G
Sbjct: 148 QALCNTGNLSRA--MQYFRESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERG 203
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Query: 191 MITSYIAAGELEKAQDLF-DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ + + A +A +F D ++ + N TYN++I GFC AG + A ++ EM+ R
Sbjct: 75 LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
G +P+ + ++++V L N G L+ A + R VE
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE 168
>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 135/285 (47%), Gaps = 1/285 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQ 60
++ G+ T F+ LI G G + ++ F K P +YNA++ A G +
Sbjct: 217 LKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVE 276
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + ++ M G PD +T+N ++ R G + RL M G D TYN
Sbjct: 277 FKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNT 336
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + KG + A +++ M P+V+ ++T++DG ++ G LD F+EM G
Sbjct: 337 LLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG 396
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D V Y +++ Y G E+A D+ M G +V TYN+++ G+ ++DE
Sbjct: 397 VGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVR 456
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM+ +PN L Y+TL+ G EA EV R + G
Sbjct: 457 RVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAG 501
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 118/238 (49%), Gaps = 1/238 (0%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+A++ L + + +L + V+ EGY + ++ ++ A R G ++ ++ D M
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253
Query: 109 SGFSPDFHTYNILLHVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+G P+ TYN ++ GKG + + + M G P + F +L+ SR G +
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWE 313
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + F M +KG D+ Y ++ + G+++ A ++ M TK LPNV TY++MI
Sbjct: 314 AARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMI 373
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ G+ D+A M EM+ G + + YNTL+S G+ +A +V + M G
Sbjct: 374 DGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAG 431
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%), Gaps = 17/285 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKV----VERFIKSKLFNFRPFKNSYNAILH 53
M+ NG TFN L+ C GL AR++ V++ I +F +YN +L
Sbjct: 287 MLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKGIDQDIF-------TYNTLLD 339
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A+ Q L + +M + P+++TY+ ++ ++G+LD + +EM G
Sbjct: 340 AVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGL 399
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YN LL V K + AL++ M+ G V+ + L+ G + D + F
Sbjct: 400 DRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVF 459
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+EM P+++ Y+ +I Y G ++A ++F G +V Y+++I C
Sbjct: 460 EEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKN 519
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
G + + T++ EM G PN + YN+++ G+ A A V+
Sbjct: 520 GLVESSVTLLDEMTKEGIRPNVVTYNSIIDAF---GRSASAQCVV 561
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 141/297 (47%), Gaps = 9/297 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M NG T+N +I CG+ G+ +KVVE F +P + ++N++L
Sbjct: 251 MKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGG 310
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++ ++ M D+G DI TYN ++ A + G++D ++ EM P+ TY+
Sbjct: 311 LWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYS 370
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN----LDACKYFFDE 175
++ K + ALN+ N MK +G + + TL+ ++ G LD CK E
Sbjct: 371 TMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCK----E 426
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M N G DVV Y ++ Y ++ + +F+ M PN+ TY+++I + G
Sbjct: 427 MENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGL 486
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EA + +E + G + ++Y+ L+ L G + + ++ M ++G ++V+
Sbjct: 487 YKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVT 543
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 101/215 (46%), Gaps = 7/215 (3%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
RLGK++ + D + G+ + ++ L+ G+ A+ + + MK G P+++
Sbjct: 202 RLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLV 261
Query: 152 HFTTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ ++D + G FD M + G PD + + ++ G E A+ LF
Sbjct: 262 TYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA 321
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M+ KG ++FTYN+++ C G+ D A +M EM ++ PN + Y+T++ G+
Sbjct: 322 MVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGR 381
Query: 271 LAEAHEVIRHM------VEKGKYIHLVSKFKRYKR 299
L +A + M +++ Y L+S + + R
Sbjct: 382 LDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGR 416
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 113 PDFHTYNILLHVLG-KGDKPLAALNL-LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD +T+ LL LG +GD A +E G + + ++ L R G ++ K
Sbjct: 153 PDDYTF--LLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAK 210
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
FD +G V ++ +I++Y +G +A +FD M + G +PN+ TYN++I
Sbjct: 211 AVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDAC 270
Query: 231 CMAG-KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G +F + + M S G P+ + +N+L++ G A + MV+KG
Sbjct: 271 GKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKG 326
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 144/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G + T+N LIC + GL + + + + P S+N I++ ++
Sbjct: 298 MAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF--CKE 355
Query: 61 YKLIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K+ + QQ+SD + PDI++YN ++ RLG + + LLDE+ S + T
Sbjct: 356 GKMSD-ARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVT 414
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + AL L M G P V+ +T L++G + GN+ K FFDEM
Sbjct: 415 YNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEML 474
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD YT I + G+ KA L + M+TKG P+V TYN + G C G +
Sbjct: 475 HVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLE 534
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++++M G P+ + Y + + G L E E+ M+ +G+ +V+
Sbjct: 535 EAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVT 589
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 131/276 (47%), Gaps = 6/276 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A K+ E I + P +Y +++ + + + +
Sbjct: 414 TYNTLIDGLCRLGDLETALKLKEDMINRGI---HPDVVTYTVLVNGACKLGNMLMAKEFF 470
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M G APD Y + + +LG + +L +EM GF PD TYN+ ++ L K
Sbjct: 471 DEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKL 530
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A LL M G P + +T+ M G+L + F +M ++G P VV Y
Sbjct: 531 GNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTY 590
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
TV+I ++ G L+ A F M KG +PNV TYN +I GFC K D+AC EM+
Sbjct: 591 TVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQE 650
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+G PN Y L++ N GK EA + M+ K
Sbjct: 651 KGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGK 686
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFK---NSYNAILHALLGIRQYKLIE 65
++N LI C G +G E FI FR +YN ++ L + +
Sbjct: 379 SYNTLIYGFCRLGNIG------EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETAL 432
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI-LLHV 124
+ + M + G PD++TY +++ +LG + DEM G +PD Y ++
Sbjct: 433 KLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGE 492
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L GD A L M GF P V+ + ++GL + GNL+ +M G +PD
Sbjct: 493 LKLGDTA-KAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPD 551
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V YT + +++ G L + +++F M+++GQ P V TY +I + G+ D A
Sbjct: 552 HVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFL 611
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
EM+ +G PN + YN L++ K+ +A + M EKG +
Sbjct: 612 EMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIF 654
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ N F + N ++ + L K +E + + RP +YN +LH+ +
Sbjct: 193 MMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGE 252
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M + G P +T+N+++ + G+L Q L+ EM ++G +TYN
Sbjct: 253 VQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNP 312
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + AL L M G P+V T+M G + G + + +M K
Sbjct: 313 LICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN 372
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MPD++ Y +I + G + +A L D + + N+ TYN++I G C G + A
Sbjct: 373 LMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETAL 432
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M +RG +P+ + Y LV+ G + A E M+ G
Sbjct: 433 KLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVG 477
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 140/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T T+N ++ C GEV A +V + + + P + ++N +++ L
Sbjct: 228 MGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCY---PSEVTFNVLINGLSK 284
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + Q+M+ G TYN ++C + G L + L +EM G SP +
Sbjct: 285 KGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVAS 344
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE-- 175
+N +++ K K A L+ M + P ++ + TL+ G R GN+ DE
Sbjct: 345 HNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELR 404
Query: 176 ---------------------------------MANKGCMPDVVCYTVMITSYIAAGELE 202
M N+G PDVV YTV++ G +
Sbjct: 405 FRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNML 464
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A++ FD M+ G P+ F Y + I G G +A + +EM ++G P+ + YN V
Sbjct: 465 MAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFV 524
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L G L EA E+++ M+ G
Sbjct: 525 NGLCKLGNLEEAGELLQKMIRDG 547
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 133/288 (46%), Gaps = 7/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+ +L+ C G + +A++ + + L P + +Y A + L
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGL---APDQFAYTARIVGELK 494
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M +G+ PD++TYN+ + +LG L++ LL +M R G PD T
Sbjct: 495 LGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVT 554
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +H + + M G P+V+ +T L+ + G LD +F EM
Sbjct: 555 YTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQ 614
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG +P+V+ Y V+I + ++++A F M KG PN +TY +I C GK+
Sbjct: 615 EKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQ 674
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M + P+ + L+ L K+ +A + I ++ G
Sbjct: 675 EALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIESLILDG 721
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 112/226 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
VY+ M + G P + TYN ++ + + G++ + L+ +M G P T+N+L++ L
Sbjct: 224 VYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLS 283
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A L+ M + G S + L+ G + G L ++EM +G P V
Sbjct: 284 KKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVA 343
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ ++ + G++ A+ M+ K +P++ +YN++I GFC G EA ++ E+
Sbjct: 344 SHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDEL 403
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
R + N + YNTL+ L G L A ++ M+ +G + +V+
Sbjct: 404 RFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVT 449
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 123/223 (55%), Gaps = 7/223 (3%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH--- 123
V +M G PD++TYN ++ + +L LL+EM G PD T+ L+H
Sbjct: 38 VRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYC 97
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ GK DK AL L + M P ++ + TL+DG+ R G+LD +D+M ++ P
Sbjct: 98 IEGKLDK---ALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP 154
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ V Y+++I S+ G++E A D MI KG LPN+ TYNS+I+G+C +G + +
Sbjct: 155 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 214
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
++M +P+ + YNTL+ K+ +A +++ +M+EK K
Sbjct: 215 QKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL-NMMEKEK 256
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 110/208 (52%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G PD + Y +V+ R G + R+ DEM G PD TYN LL+ L K + L A
Sbjct: 11 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
LLN M+E G P + FTTL+ G G LD FD M N+ PD+V Y +I
Sbjct: 71 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G+L+KA DL+D M ++ PN TY+ +I C G+ ++A + EM ++G PN
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ YN+++ +G +++ + ++ M+
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMM 218
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 114/243 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN +L+ L R+ E + +M + G PD+ T+ ++ GKLD+ +L
Sbjct: 49 PDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQL 108
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
D M PD TYN L+ + + A +L + M P+ + ++ L+D
Sbjct: 109 FDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCE 168
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G ++ F DEM NKG +P+++ Y +I Y +G + K Q M+ P++ T
Sbjct: 169 KGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLIT 228
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G+ K +A ++ ME P+ + YN L++ G + EA + M
Sbjct: 229 YNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMC 288
Query: 283 EKG 285
KG
Sbjct: 289 AKG 291
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M ++ PDI+TYN ++ R G LD+ + L D+M P+ TY+IL+
Sbjct: 108 LFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHC 167
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A L+ M G P+++ + +++ G R+GN+ + F +M PD++
Sbjct: 168 EKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLI 227
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I YI ++ A L + M + P+V TYN +I GF + G EA + ++M
Sbjct: 228 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 287
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++G P+ Y ++++ AG EA ++ M+++G
Sbjct: 288 CAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 326
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%)
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM G PD Y +++ + AL + + M G P V+ + TL++GL +
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
L + +EM +G PD+ +T +I Y G+L+KA LFD M+ + P++ T
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G C G D+A + +M SR PN + Y+ L+ + G++ +A + M+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 283 EKG 285
KG
Sbjct: 184 NKG 186
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 6/211 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A + + ++F P +Y+ ++ + Q +
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIF---PNHVTYSILIDSHCEKGQVEDAFGFL 179
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++G P+I+TYN ++ R G + + + L +M + SPD TYN L+H K
Sbjct: 180 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKE 239
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK A LLN M++ P V+ + L++G S GN+ + F++M KG PD Y
Sbjct: 240 DKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTY 299
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
MI ++ AG ++A L D M+ +G P+
Sbjct: 300 MSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G P TF LI C G++ A ++ + + +L RP +YN ++ +
Sbjct: 77 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL---RPDIVTYNTLIDGMCR 133
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ M P+ +TY+I++ + G+++ LDEM G P+ T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ + L M P ++ + TL+ G + + + M
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PDVV Y ++I + G +++A +F+ M KG P+ +TY SMI G AG
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 313
Query: 238 EACTMMKEMESRGCNPN 254
EA + EM RG P+
Sbjct: 314 EAFQLHDEMLQRGFAPD 330
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+ EM G +PD V YT++I + AG + A + D M+ G LP+V TYN+++ G C
Sbjct: 3 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ +A ++ EM RG P+ + TL+ GKL +A ++ M+ +
Sbjct: 63 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 115
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 135/291 (46%), Gaps = 19/291 (6%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN-------------FRPFKNSYNAILHA 54
T F + I TC RKV+E +K K F + +N ++H
Sbjct: 98 TREHKFWVPIDTC------RKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHR 151
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+L + V+ ++ G P +++YN +M RLG LD+ RL M SG PD
Sbjct: 152 FCKDGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPD 211
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+TY++L++ L K K A L + M G P+ + FTTL+DG + G +D +
Sbjct: 212 VYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ PD++ Y +I G+L++A L D M KG P+ TY ++I G C G
Sbjct: 272 QMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEG 331
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 332 DLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ LA+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 VKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 269 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +A M + + +T L+ GL + G + EM + G PD
Sbjct: 329 KEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDAR 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 133/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI GL + E +P +YNAI++ L +
Sbjct: 280 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 339
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y + V +M G +PD TYNI++ R + R+ DEM G PD +++
Sbjct: 340 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +L K AL MK G P + +T L+ G R G + DEM +G
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+ DVV Y ++ L +A +LF M +G P+ +T+ ++I G+ G ++A
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
T+ + M R P+ + YNTL+ ++ + +E+ M+ + Y + +S
Sbjct: 520 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 571
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 3/267 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G V LA ++ + ++S + + + N +++AL ++ + + M ++G PD+
Sbjct: 233 GWVDLAWEIYQEVVRSGV---QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 289
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ A R G L++ L+D M G P TYN +++ L K K L A +L+
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 349
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M ++G P + L+ R N+ + FDEM ++G +PD+V ++ +I G
Sbjct: 350 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 409
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A F M G P+ Y +I GFC G EA + EM +GC + + YNT
Sbjct: 410 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNT 469
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+++ L L+EA E+ M E+G +
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVF 496
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 108/218 (49%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ M + G APD + Y I++ R G + + ++ DEM G D TYN +L+ L K
Sbjct: 417 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCK 476
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A L M E G P FTTL++G S+ GN++ F+ M + PDVV
Sbjct: 477 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVT 536
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I + E+EK +L++ MI++ PN +Y +I G+C G EA + EM
Sbjct: 537 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 596
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + NT+V AG +A E + +M+ KG
Sbjct: 597 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 634
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN IL+ L + + ++ +M++ G PD T+ ++ + G +++ L + M
Sbjct: 466 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ PD TYN L+ KG + L N M P+ + + L++G G +
Sbjct: 526 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 585
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+DEM KG ++ ++ Y AG KA + M+ KG +P+ TYN++
Sbjct: 586 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 645
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GF D A ++ +ME+ G P+ + YN +++ G++ EA ++ M+E+G
Sbjct: 646 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +M ++G D++TYN ++ + L + L EM G PDF+T+ L++
Sbjct: 451 VRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYS 510
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L M + P V+ + TL+DG + ++ +++M ++ P+ +
Sbjct: 511 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 570
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I Y G + +A L+D M+ KG + T N++++G+C AG +A + M
Sbjct: 571 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 630
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ + YNTL++ + A ++ M G
Sbjct: 631 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TF LI + G K V F N +P +YN ++ +
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ M P+ ++Y I++ +G + + RL DEM GF T N
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + + A L++M G P + + TL++G + N+D ++M N G
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 669
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PDV+ Y V++ + G +++A+ + MI +G P+ TY S+I G EA
Sbjct: 670 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 729
Query: 241 TMMKEMESRGCNPN 254
+ EM RG P+
Sbjct: 730 RVHDEMLQRGFVPD 743
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 122/287 (42%), Gaps = 30/287 (10%)
Query: 31 ERFIKSKLFNFRPFK---NSYNAILHALL-------------------GIRQYKLIEWVY 68
+RFI S N FK S++A++H L+ G+ + +++E +
Sbjct: 115 QRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLV 174
Query: 69 QQMSDEGYAP---DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ G P D+L V K R G + F L + G + N LL L
Sbjct: 175 LTYGNCGSNPLVFDLLVRTYVQARKLREG-CEAFRVLKSK----GLCVSINACNSLLGGL 229
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K A + + G +V +++ L + ++ K F +M KG PDV
Sbjct: 230 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 289
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I +Y G LE+A +L D M KG P VFTYN++I G C GK+ A ++ E
Sbjct: 290 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 349
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M G +P+ YN L+ + +A + M +G LVS
Sbjct: 350 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 396
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 139/286 (48%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGIR 59
M+ G+ T LI + G K F+K + ++P ++Y A+++
Sbjct: 320 MVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKED 379
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ E + +M ++G P+ TY ++ ++G + + L+D MG+ GFSP+ +TYN
Sbjct: 380 KLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYN 439
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K A LLN + G + +T LM R + + FF++M
Sbjct: 440 AIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKV 499
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+ YT +I+ + ++++++ LF+ ++ G +P TY SMI G+C G A
Sbjct: 500 GFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLA 559
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M + GC P+ + Y L+S L KL +A + M++KG
Sbjct: 560 VKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG 605
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 15/301 (4%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLG 57
+G+ T+ +I C ++ A ++ R + L P N+Y ++ H +G
Sbjct: 358 SDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLV---PNTNTYTTLIDGHCKVG 414
Query: 58 --IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+R Y+L++ M EG++P+I TYN ++ + G LD+ +RLL+++ G D
Sbjct: 415 NFVRAYELMDL----MGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADG 470
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY IL+ V + +L N M +VGF P + +TTL+ R + + F+E
Sbjct: 471 VTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEE 530
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ G +P YT MI Y G A LF M G P+ TY ++I G C K
Sbjct: 531 AVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESK 590
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
D+A + M +G +P + TL + A V+ + EK ++I V+
Sbjct: 591 LDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRL-EKRQWIRTVNTLV 649
Query: 296 R 296
R
Sbjct: 650 R 650
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 121/241 (50%), Gaps = 1/241 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+ N +L +G+ ++ E ++ +M G +PD +++ +++ A +G++ + + L+
Sbjct: 190 QTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNA 249
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M GF D T +++ + + M E+G P+V++FT L++GL + G+
Sbjct: 250 MVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGS 309
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI-TKGQLPNVFTYN 224
+ +EM +G P+V +T +I G EKA LF ++ + G PNV TY
Sbjct: 310 IKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYT 369
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+MI G+C K + A ++ M+ +G PN Y TL+ G A+E++ M ++
Sbjct: 370 AMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKE 429
Query: 285 G 285
G
Sbjct: 430 G 430
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 7/239 (2%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M + G AP+++ + ++ + G + Q LL+EM R G+ P+ +T+ L+ L K
Sbjct: 282 FWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCK 341
Query: 128 GDKPLAALNL-LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
A L L ++ G+ P+V +T +++G + L+ + M +G +P+
Sbjct: 342 KGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTN 401
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I + G +A +L D M +G PN++TYN++I G C G DEA ++ ++
Sbjct: 402 TYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
G + + Y L+S + M++ G Y L+S F R K+
Sbjct: 462 SVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQ 520
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 1/217 (0%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M ++G T N V+ +G ++ + EM + G SPD ++ +++
Sbjct: 179 EMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMG 238
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ L A LN M E GF T ++D + G ++ +F +M G P+V+ +T
Sbjct: 239 RVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFT 298
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM-MKEMES 248
+I G +++A +L + M+ +G PNV+T+ ++I G C G ++A + +K + S
Sbjct: 299 ALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRS 358
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G PN Y +++ KL A ++ M E+G
Sbjct: 359 DGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQG 395
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 2/195 (1%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHV-LGKGDKPLAALNLLNHMKEVGFDPSVLH 152
GKL + ++ EM G T N +L V +G G +A N+ M + G P +
Sbjct: 168 GKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAE-NMFVEMCQRGVSPDCVS 226
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F ++ G + + + + M +G + D T++I ++ G + + F M+
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G PNV + ++I G C G +A +++EM RG PN + TL+ L G
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346
Query: 273 EAHEVIRHMVEKGKY 287
+A + +V Y
Sbjct: 347 KAFRLFLKLVRSDGY 361
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 49/95 (51%)
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
M+ ++ G+L++A ++ M +G + + T N ++ G + A M EM RG
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + + +V N G++ EA + + MVE+G
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERG 254
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 152/313 (48%), Gaps = 43/313 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NILI C ++ LA ++ + +K + P + +++L+ ++ +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMK---LGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK- 127
QM + GY PD +T+ ++ + K + L+D M + G P+ TY ++++ L K
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
GD L ALNLLN M+ + V+ F T++D L + ++D F EM KG P+VV
Sbjct: 239 GDTDL-ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 188 YTVMIT-----------------------------------SYIAAGELEKAQDLFDGMI 212
Y+ +I+ +++ G+ +A+ L+D MI
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMI 357
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ P++FTYNS++ GFCM + D+A M + M S+ C P+ + YNTL+ + ++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 273 EAHEVIRHMVEKG 285
+ E+ R M +G
Sbjct: 418 DGTELFREMSHRG 430
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++ LI C+ G A +++ I+ K+ P ++NA++ A +
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI---NPNLVTFNALIDAFVK 342
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E +Y M PDI TYN ++ +LD+ ++ + M PD T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + L M G + +TTL+ GL G+ D + F +M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD++ Y++++ G+LEKA ++FD M +++ Y +MI G C AGK D
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + +G PN + YNT++S L + L EA+ +++ M E G
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ +++ C G+ LA ++ + +K+ +N I+ +L
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI---EADVVIFNTIIDSLCK 272
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++++M +G P+++TY+ ++ G+ +LL +M +P+ T
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ K K + A L + M + DP + + +L++G LD K F+ M
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PDVV Y +I + + +E +LF M +G + + TY ++I+G G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G P+ + Y+ L+ L N GKL +A EV +M
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 132/285 (46%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TFN LI G+ A K+ + IK + P +YN++++
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI---DPDIFTYNSLVNGFCM 377
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + PD++TYN ++ + +++ L EM G D T
Sbjct: 378 HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 437
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L A + M G P ++ ++ L+DGL G L+ FD M
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
D+ YT MI AG+++ DLF + KG PNV TYN+MI G C
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA ++K+M+ G PN YNTL+ ++LR+ K A A E+IR M
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA-ELIREM 601
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TF LI V L ++V+R + L +Y +++
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV-------TYGVVVN 233
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + +M D++ +N ++ + + +D L EM G P
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+ L+ L + A LL+ M E +P+++ F L+D + G + +
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M + PD+ Y ++ + L+KA+ +F+ M++K P+V TYN++I+GFC +
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ + +EM RG + + Y TL+ L + G A +V + MV G
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 130/253 (51%), Gaps = 2/253 (0%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RP + +N +L A+ ++++ ++ + ++M + TYNI++ R ++
Sbjct: 80 RPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLA 139
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL +M + G+ P T + LL+ G + A+ L++ M E+G+ P + FTTL+ G
Sbjct: 140 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 199
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L D M +GC P++V Y V++ G+ + A +L + M +
Sbjct: 200 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V +N++I C D+A + KEME++G PN + Y++L+S L + G+ ++A +++
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 280 HMVEKGKYIHLVS 292
M+EK +LV+
Sbjct: 320 DMIEKKINPNLVT 332
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 118/251 (47%), Gaps = 6/251 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T+N L+ C + A+++ E + F P +YN ++
Sbjct: 356 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF---PDVVTYNTLIKGFCK 412
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G D +TY ++ + G D ++ +M G PD T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K AL + ++M++ + +TT+++G+ +AG +D F ++
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+VV Y MI+ + L++A L M G LPN TYN++IR G
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 238 EACTMMKEMES 248
+ +++EM S
Sbjct: 593 ASAELIREMRS 603
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G P T++IL+ C G++ A +V + KS++ + Y ++ +
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI---KLDIYIYTTMIEGMCK 517
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ ++ +S +G P+++TYN + +C+K RL L + + LL +M G P+
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK-RL--LQEAYALLKKMKEDGPLPN 574
Query: 115 FHTYNILLHV-LGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKY 171
TYN L+ L GDK A+ L+ M+ F D S + L+ + G LD K
Sbjct: 575 SGTYNTLIRAHLRDGDKA-ASAELIREMRSCRFVGDASTI---GLVANMLHDGRLD--KS 628
Query: 172 FFDEMA 177
F D ++
Sbjct: 629 FLDMLS 634
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/120 (20%), Positives = 55/120 (45%)
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD F M +P +V + ++++ + + L + M + ++TYN
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I FC + A ++ +M G P+ + ++L++ + ++++A ++ MVE G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C C LA ++ + +K F+P + ++L+ +++ +
Sbjct: 652 SFTILIHCFCRCSRFSLALALLGKMMK---LGFQPSIVTLGSLLNGFCQGNRFQEAVSLV 708
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M++ G P+++ YN V+ + L+ + M + G D TYN L+ L
Sbjct: 709 DSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS 768
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LL M + DP+V+ FT L+D + GNL K + EM + P+++ Y
Sbjct: 769 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I + G L A+ +FD M++KG P+V TYN++I GFC + + ++ + EM
Sbjct: 829 NSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTH 888
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + YNTL+ AGKL A +V MV+ G
Sbjct: 889 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 925
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 110/227 (48%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN +++ L R ++ M +G D +TYN ++ G+ RLL +M
Sbjct: 723 YNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ P+ + L+ K L A NL M P++L + +L++G G L
Sbjct: 783 KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLG 842
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
K+ FD M +KGC PDVV Y +IT + + +E LF M +G + + FTYN++I
Sbjct: 843 DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLI 902
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G+C AGK + A + M G P+ + YN L+ L N GK+ +A
Sbjct: 903 HGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKA 949
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 7/243 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLL 103
S+ ++H + L + +M GY P I+T+ ++ C + R+ D F L+
Sbjct: 102 SFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIH--DAFS-LV 158
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSR 162
M +SG+ P+ YN L+ L K AL LLN M++ G ++ + TL+ GL
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+G +M + PDV +T +I +++ G L++AQ+L+ M+ PN T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I G CM G+ A M S+GC PN + YNTL++ + ++ + ++ + M
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338
Query: 283 EKG 285
+G
Sbjct: 339 REG 341
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 136/271 (50%), Gaps = 8/271 (2%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + + +L A+ + ++ ++ +++ +M + G + D+ ++ I++ R
Sbjct: 605 EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCS 664
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+ LL +M + GF P T LL+ +G++ A++L++ M E+G +P+V+ +
Sbjct: 665 RFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYN 724
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
T+++GL + +L+ F M KG + D V Y +I+ +G A L M+ +
Sbjct: 725 TVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKR 784
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PNV + ++I F G EA + KEM R +PN L YN+L++ G+L +A
Sbjct: 785 KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDA 844
Query: 275 HEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ MV KG Y L++ F + KR
Sbjct: 845 KHMFDLMVSKGCFPDVVTYNTLITGFCKSKR 875
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 135/296 (45%), Gaps = 7/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ + TF L+ C + A +V +KS + P YN ++ L
Sbjct: 126 MMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKS---GYEPNVVVYNTLIDCLCK 182
Query: 58 IRQYKLIEWVYQQMSDEG-YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +M +G A D++TYN ++ G+ Q R+L +M + +PD
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+ L+ K A L M + P+ + + +L++GL G L K FD M
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
A+KGC P+VV Y +I + + +E LF M +G + + FTYN++I G+C GK
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKL 362
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + M S G P+ + + L+ L G++ A M KY+ +V+
Sbjct: 363 RVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVA 418
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 5/288 (1%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G+ +N LI C C G+V +A +++ K +YN +L L
Sbjct: 161 MVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLV--TYNTLLTGLCY 218
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + + M+ PD+ T+ ++ A + G LD+ L +M +S P+ T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ L + A + M G P+V+ + TL++G ++ ++ F M
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + D Y +I Y G+L A+D+F M++ G P++ T+ ++ G C+ G+
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIG 398
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +M S + YN ++ L A K+ EA E+ + +G
Sbjct: 399 SAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G A T+N LI C G A +++ +K K+ P + A++
Sbjct: 746 MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKI---DPNVIFFTALIDTF-- 800
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++ L+E +Y++M P+ILTYN ++ G+L + D M G PD
Sbjct: 801 VKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDV 860
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + + L M G + TL+ G +AG L+ + F+
Sbjct: 861 VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PD+V Y +++ G++EKA + + + ++ TYN +I+G C K
Sbjct: 921 MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + + +G + + Y T++S L G EA ++ M E G
Sbjct: 981 VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDG 1030
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 1/219 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M P ++ + ++ A L + + +M G S D +++ IL+H
Sbjct: 52 LFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFC 111
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + AL++L M ++G+DPS++ F +L+ G + M G P+VV
Sbjct: 112 RCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVV 171
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y +I G++ A +L + M KG+L ++ TYN+++ G C +G++ +A ++++
Sbjct: 172 VYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRD 231
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M R NP+ + L+ G L EA E+ + M++
Sbjct: 232 MTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS 270
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+L M + PSV+ FT L+ ++ + YF +M G D+ +T++I
Sbjct: 49 ALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ L A + M+ G P++ T+ S++ GFC+ + +A +++ M G P
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEP 168
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
N +VYNTL+ L G + A E++ M +KG+
Sbjct: 169 NVVVYNTLIDCLCKNGDVNIALELLNEMEKKGR 201
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 6/231 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI T+N LI C G +G A+ + + + F P +YN ++
Sbjct: 816 MIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCF---PDVVTYNTLITGFCK 872
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M+ +G D TYN ++ + GKL+ ++ + M G PD T
Sbjct: 873 SKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVT 932
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNILL L K AL ++ +++ D ++ + ++ G+ R + F +
Sbjct: 933 YNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLT 992
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
KG D + Y MI+ G +A L M G +P+ Y+ +R
Sbjct: 993 RKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLR 1043
>gi|147838532|emb|CAN65388.1| hypothetical protein VITISV_038361 [Vitis vinifera]
Length = 676
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 114/221 (51%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++M G+ P ++T N ++ +L D+ + +EM R G +P+ +T+NIL HVL K
Sbjct: 256 FRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCK 315
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
L M+E GFDP ++ + TL++ R G LD Y + M +G +PD+V
Sbjct: 316 DGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVS 375
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT ++ G + +A LF M+ +G P++ TYN++I G+C GK E+ +++ +M
Sbjct: 376 YTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMI 435
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
G +P+ LV GK A ++ + G I
Sbjct: 436 WNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSI 476
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F++L+ +G R+ + F + F P + N +L+ LL + VY++M
Sbjct: 235 VFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEM 294
Query: 72 SDEGYAPDILTYNI---VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
G AP++ T+NI V+C GK+++F L++M GF PD TYN L++ +
Sbjct: 295 ERFGIAPNLYTFNILTHVLCKDGDTGKVNKF---LEKMEEEGFDPDIVTYNTLINSYCRK 351
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L M G P ++ +T LM+GL + G + F M ++G PD+V Y
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 411
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I Y G++++++ L MI G P+ FT ++ G+ GKF A ++ E++
Sbjct: 412 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQR 471
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + +Y+ L+ L + A ++ M + G
Sbjct: 472 FGVSISQDIYSYLIVALCRENRPFAAKNLLERMSQDG 508
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQY--------KLIEWVYQQMSDEGYAP------ 78
++K+ L RP +Y I+H L R + +L+E V + E
Sbjct: 168 WVKNDL-GLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNLILCT 226
Query: 79 -----DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
D + +++++ A R+G++ + R M R GF P T N LL+ L K +
Sbjct: 227 EDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDR 286
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
+ M+ G P++ F L L + G+ F ++M +G PD+V Y +I
Sbjct: 287 CWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLIN 346
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
SY G L+ A L+ M +G +P++ +Y +++ G C G+ EA + M RG +P
Sbjct: 347 SYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSP 406
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YNTL+ GK+ E+ ++ M+ G
Sbjct: 407 DIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 438
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 118/284 (41%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFNIL +C G+ G K +E+ + F P +YN ++++ +
Sbjct: 298 GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEE---GFDPDIVTYNTLINSYCRKGRL 354
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++Y+ M G PD+++Y +M + G++ + H+L M G SPD TYN L
Sbjct: 355 DDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTL 414
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H K K + +LL+ M G P L++G + G + E+ G
Sbjct: 415 IHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGV 474
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
Y+ +I + A++L + M G + YN +I+ FC EA
Sbjct: 475 SISQDIYSYLIVALCRENRPFAAKNLLERMSQDGHKXELEIYNELIKSFCQCDCIAEALL 534
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM + PN Y ++ L + E ++ MV G
Sbjct: 535 LKMEMVDKEIKPNLATYRAVJGCLSRLSRSMEGESLVGEMVASG 578
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 6/264 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR---PFKNSYNAILHALLG 57
M E GF T+N LI + G ++ + F K+ R P SY A+++ L
Sbjct: 329 MEEEGFDPDIVTYNTLINSYCRKG---RLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCK 385
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M G +PDI+TYN ++ + GK+ + LL +M +G SPD T
Sbjct: 386 EGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFT 445
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+L+ GK K L+ALNL+ ++ G S ++ L+ L R A K + M+
Sbjct: 446 CWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMS 505
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G ++ Y +I S+ + +A L M+ K PN+ TY ++J +
Sbjct: 506 QDGHKXELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVJGCLSRLSRSM 565
Query: 238 EACTMMKEMESRGCNPNFLVYNTL 261
E +++ EM + G P+ + L
Sbjct: 566 EGESLVGEMVASGXLPDLEICRAL 589
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 110 GFSPDFHTYNILLHVLG-------------------KGDKPLAAL--NLLNHMKEVGFDP 148
G P Y I++H L K D P + NL+ ++ +DP
Sbjct: 174 GLRPSTQNYCIIVHTLAWSRNFSQAIKFLCELVELVKDDLPGEDVFKNLILCTEDCNWDP 233
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
V F L+ R G + F M G +P V+ ++ + ++ +++
Sbjct: 234 VV--FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 291
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M G PN++T+N + C G + +++ME G +P+ + YNTL+++
Sbjct: 292 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 351
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
G+L +A + + M +G LVS
Sbjct: 352 GRLDDAFYLYKIMYRRGVVPDLVS 375
>gi|302755288|ref|XP_002961068.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
gi|300172007|gb|EFJ38607.1| hypothetical protein SELMODRAFT_75649 [Selaginella moellendorffii]
Length = 461
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 122/236 (51%), Gaps = 1/236 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN+++ L R+ K V+ +M+ G +PDI TYNI+ R G ++LL M
Sbjct: 193 TYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRM 252
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G PD T+N L++ L + ++ A+ L+ M G DP+ + +T L+ L+R
Sbjct: 253 NQDGVLPDVVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNART 312
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG-QLPNVFTYNS 225
D C F + ++ P+V Y ++++ AG L++A LF M+ PN TY +
Sbjct: 313 DECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRA 372
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+I G C+ + + A ++ M RGC P+ Y T+V+ G++ EA E++ M
Sbjct: 373 LIHGLCLKMELERAVLLLDAMAKRGCAPDVACYGTIVAAFCKQGRIDEAFELLERM 428
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 130/287 (45%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ENG + + N + C G V A + + S F+ R ++Y+ ++ AL
Sbjct: 42 MAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNS--FSLRASVSTYSILVAALTA 99
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + +QM G D TY++++ + + G +D+ L++ M PD
Sbjct: 100 AKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARI 159
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ ++ L K + A+ + + SV+ + +L+ G +A L F MA
Sbjct: 160 YDPVIEELSKTGRVDEAVEIAKE-ADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMA 218
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD+ Y ++ G A L M G LP+V T+NS+I G ++
Sbjct: 219 RTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVTFNSLINGLVEDNRYH 278
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A T+++EM SRGC+PN + Y L+ L + E E+ + ++++
Sbjct: 279 RAVTLIQEMVSRGCDPNAITYTILLKWLARNARTDECVELFQRLLDR 325
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 97/227 (42%), Gaps = 2/227 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVL 125
+ + M++ G I N + + G +D L E S TY+IL+ L
Sbjct: 38 LLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSILVAAL 97
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ AL LL M+ VG + ++ ++ L ++G +D K + M ++ C+PD
Sbjct: 98 TAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDA 157
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y +I G +++A ++ K +V TYNS++ GF A + +
Sbjct: 158 RIYDPVIEELSKTGRVDEAVEIAKEADAK-HCTSVVTYNSLVLGFLKARRLKRGIKVFTR 216
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M G +P+ YN L L G A++++ M + G +V+
Sbjct: 217 MARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDVVT 263
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 6/173 (3%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-PDVVCYTVM 191
A + LL M E G S+ + GL +AGN+D F E N + V Y+++
Sbjct: 34 ATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAKNSFSLRASVSTYSIL 93
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + AA A +L + M + G + TY+ +I C +G D+A +++ M SR C
Sbjct: 94 VAALTAAKRNNDALELLEQMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNC 153
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEV-----IRHMVEKGKYIHLVSKFKRYKR 299
P+ +Y+ ++ L G++ EA E+ +H Y LV F + +R
Sbjct: 154 VPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHCTSVVTYNSLVLGFLKARR 206
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 1/99 (1%)
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ + Y G L +L M G ++ N +RG C AG D A ++E +
Sbjct: 19 FPALAVKYSEQGNLRATIELLKDMAENGSTLSIQDLNGCLRGLCKAGNVDGALEFLREAK 78
Query: 248 -SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S + Y+ LV+ L A + +A E++ M G
Sbjct: 79 NSFSLRASVSTYSILVAALTAAKRNNDALELLEQMESVG 117
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 127 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 186
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 187 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 246
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L +A L D M KG P+ FTY ++I
Sbjct: 247 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLI 306
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y ++S L G+ +A +++R M+
Sbjct: 307 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLK 366
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 367 PDTGTYTMIINEF 379
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 96/182 (52%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+E+ G+ + +NIL+H K A ++ + + + G PSV+ + TLM+G R
Sbjct: 113 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 172
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G+LD M G PDV Y+V+I +++ A +LFD M+ KG +PN T+
Sbjct: 173 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 232
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++I G C G+ D A + K+M S+ P+ + YNTL+ L G L +AH +I M
Sbjct: 233 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSM 292
Query: 284 KG 285
KG
Sbjct: 293 KG 294
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 115 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 171
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 172 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 231
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L+ DEM+
Sbjct: 232 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMS 291
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 292 MKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPV 351
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++EM S G P+ Y +++ G + + ++++ M G
Sbjct: 352 DAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNG 399
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+++LI C ++ A ++ + + L P ++ ++
Sbjct: 185 MLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLV---PNGVTFTTLIDGHCK 241
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y+QM + PD++TYN ++ + G L+Q H L+DEM G PD T
Sbjct: 242 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKFT 301
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K AA M + + +T ++ GL + G + EM
Sbjct: 302 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREML 361
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ G PD YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 362 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G+ S+ F LM + G++ + FD + G P VV Y ++ YI G+L+
Sbjct: 117 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 176
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M+ G P+V+TY+ +I G C K D+A + EM +G PN + + TL+
Sbjct: 177 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLI 236
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ A E+ + M+ + L++
Sbjct: 237 DGHCKNGRVDLAMEIYKQMLSQSLLPDLIT 266
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F++E+ G + + +++ + G++ AQ +FD + G P+V +YN+++ G+
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L K+ +A+E+ M+ KG
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 224
>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
[Vitis vinifera]
Length = 644
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 123/245 (50%), Gaps = 3/245 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C ++ A K + + +K + RP +Y ++ + ++ E+++Q+M EG
Sbjct: 369 CKVKDISNALKYLGKMLKRGI---RPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLV 425
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD+++YN +M + G L + LL M +G SPD TYNIL+H L K A ++
Sbjct: 426 PDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDI 485
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L+ + GF P V+ FT ++ G S GN + F M+ PDVV + ++ Y
Sbjct: 486 LDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCR 545
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ +A LF M+ G +V YNS+I GFC G D+AC ++ M G PN +
Sbjct: 546 TRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNIT 605
Query: 258 YNTLV 262
++ LV
Sbjct: 606 HHALV 610
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 134/288 (46%), Gaps = 9/288 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G A ++ I C+ G + K++ ++ K +P +Y ++ +L
Sbjct: 212 MKSQGLGLNASIISLFISGYCSQGNIDTGWKLL---MEMKYLGIKPDVVAYTIVIDSLCK 268
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + +M+ G D ++ + V+ ++GK ++ +D + SP+
Sbjct: 269 MSLLKEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEE---AMDVLEVFNLSPNIFV 325
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N + L L A + M E+G P +TT+M G + ++ + +M
Sbjct: 326 FNSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKML 385
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P V YT++I S G +E A+ LF MIT+G +P+V +YN+++ G+ G
Sbjct: 386 KRGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQ 445
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ M S G +P+ + YN L+ L G + EA +++ + +G
Sbjct: 446 KAFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRG 493
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+CT G + A KV + + L P SY ++ ++ +M G
Sbjct: 333 LCTDGNMLKAAKVFQDMCEMGLI---PDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGI 389
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P + TY +++ + + G ++ L M G PD +YN L++ GK A
Sbjct: 390 RPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFE 449
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL+ M+ G P ++ + L+ GL + G ++ K DE+ +G PDVV +T +I +
Sbjct: 450 LLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFS 509
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G E+A LF M P+V T ++++ G+C EA + +M G + +
Sbjct: 510 NKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVI 569
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+YN+L+ + G + +A ++ M+E G
Sbjct: 570 LYNSLIHGFCSLGNIDDACHLVSMMIEHG 598
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 113/290 (38%), Gaps = 32/290 (11%)
Query: 35 KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
K + N P N++L ALL Q L ++M +G + ++ + G
Sbjct: 176 KMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGYCSQG 235
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG--------- 145
+D +LL EM G PD Y I++ L K A ++L M ++G
Sbjct: 236 NIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDSVSVS 295
Query: 146 -----------------------FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
P++ F + + L GN+ F +M G +
Sbjct: 296 SVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDMCEMGLI 355
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD YT M+ Y ++ A M+ +G P+V TY +I C G + A +
Sbjct: 356 PDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNMEMAEYL 415
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M + G P+ + YNTL++ G L +A E++ M G LV+
Sbjct: 416 FQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVT 465
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 3/185 (1%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L+ +M P N LL L + ++ A + L MK G + + + G
Sbjct: 172 KLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFISGY 231
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
GN+D EM G PDVV YT++I S L++A + M G +
Sbjct: 232 CSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFLDS 291
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+ +S++ G+C GK +EA M +E +PN V+N+ +S L G + +A +V +
Sbjct: 292 VSVSSVVDGYCKVGKSEEA---MDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQD 348
Query: 281 MVEKG 285
M E G
Sbjct: 349 MCEMG 353
>gi|357449339|ref|XP_003594946.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359380|gb|ABN05846.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355483994|gb|AES65197.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 849
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 139/283 (49%), Gaps = 8/283 (2%)
Query: 6 FPTTARTFNILICTC-----GEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
P + ++ CT G ++ +E F K K P +YN +L + +G
Sbjct: 228 IPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMG- 286
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R + +I + +M +G D T V+ A R G LD+ R D++ +G+ P TY
Sbjct: 287 RAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATY 346
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N +L V GK ALN+L M++ +P + + L+ RAG D D MA+
Sbjct: 347 NSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMAS 406
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG MP+ + YT +I +Y AG+ +KA ++F M G +PNV TYN+++ + ++
Sbjct: 407 KGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSED 466
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++ +M+ GC P+ + +NT+++ GK +V+R M
Sbjct: 467 MIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREM 509
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 139/317 (43%), Gaps = 35/317 (11%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG P T+N ++ CGE G + V + + K F P K ++N ++ A
Sbjct: 477 NGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVD 536
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ +Y +M G+ P I TYN ++ A R G ++ +M + GF P+ +Y++LLH
Sbjct: 537 VAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRKKGFKPNETSYSLLLH 596
Query: 124 VLGKGDKP---------------------LAALNLLNH--------------MKEVGFDP 148
K L L L N+ ++ G+
Sbjct: 597 CYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKGMERAFHQLQNNGYKL 656
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ +++ R L+ D + G P++V Y +I Y G+ KA+++
Sbjct: 657 DMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLIDLYARVGDCWKAEEML 716
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ G P+V +YN++I+GFC G EA ++ EM + G P + +NT +S
Sbjct: 717 KDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILSEMTANGVQPCPITFNTFMSCYAGN 776
Query: 269 GKLAEAHEVIRHMVEKG 285
G AEA EVIR+M+E G
Sbjct: 777 GLFAEADEVIRYMIEHG 793
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 120/275 (43%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T +I CG G+ + F KL ++P +YN++L Y + ++M
Sbjct: 310 TCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEALNILKEM 369
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D PD +TYN ++ A R G D+ ++D M G P+ TY +++ GK
Sbjct: 370 EDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAGDA 429
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGL-SRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AL + MKE+G P+V + ++ L R+ + D K D M GC PD + +
Sbjct: 430 DKALEVFGQMKELGCVPNVCTYNNVLVLLGKRSRSEDMIKILCD-MKLNGCPPDRITWNT 488
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
M+ G+ + + M G P+ T+N++I + G + M EM + G
Sbjct: 489 MLAVCGEKGKQKFVSQVLREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAG 548
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P YN L++ L G A V+ M +KG
Sbjct: 549 FTPCITTYNALLNALARRGNWKAAESVVLDMRKKG 583
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 1/228 (0%)
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R + L EWV+ E D + ++ R + +L D + +S D
Sbjct: 181 RAFLLFEWVWLNFGSENMKVDDQSVEFMVKMLGRESQYSIASKLFDIIPVEEYSLDVKAC 240
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEMA 177
+LH + K A+ + MKE G DP+++ + ++D + G DEM
Sbjct: 241 TTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLDVYGKMGRAWSMILELLDEMR 300
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG D T +I++ G L++A+ FD + G P TYNSM++ F AG +
Sbjct: 301 SKGLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYT 360
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++KEME C P+ + YN LV+ AG E VI M KG
Sbjct: 361 EALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKG 408
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 140/329 (42%), Gaps = 39/329 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G A T+ +I G+ G A K +E F + K P +YN +L LLG R
Sbjct: 404 MASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVL-VLLGKRS 462
Query: 61 YK--LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+I+ + M G PD +T+N ++ GK ++L EM GF PD T+
Sbjct: 463 RSEDMIK-ILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEPDKETF 521
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G+ + + M GF P + + L++ L+R GN A + +M
Sbjct: 522 NTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVVLDMRK 581
Query: 179 KGCMPDVVCYTVMITSYIAAGE---LEKAQ-DLFDGMI-------------------TKG 215
KG P+ Y++++ Y AG LEK + +++DG + KG
Sbjct: 582 KGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLTNYKCRQLKG 641
Query: 216 ------QLPN------VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
QL N + NSM+ F K ++A M+ + G PN + YN+L+
Sbjct: 642 MERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPNLVTYNSLID 701
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G +A E+++ + G +VS
Sbjct: 702 LYARVGDCWKAEEMLKDIQNSGISPDVVS 730
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 128/314 (40%), Gaps = 35/314 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF TFN LI G G V + + + F P +YNA+L+AL +K
Sbjct: 513 GFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAA 572
Query: 65 EWVYQQMSDEGYAPDILTYNIVM-----------------------------------CA 89
E V M +G+ P+ +Y++++
Sbjct: 573 ESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLRTLVLT 632
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
Y+ +L R ++ +G+ D N +L + + K A +L+ + G P+
Sbjct: 633 NYKCRQLKGMERAFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIHVSGLQPN 692
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
++ + +L+D +R G+ + ++ N G PDVV Y +I + G +++A +
Sbjct: 693 LVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISPDVVSYNTVIKGFCKKGLVQEAIRILS 752
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M G P T+N+ + + G F EA +++ M GC PN L Y ++ A
Sbjct: 753 EMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIVIDGYIKAK 812
Query: 270 KLAEAHEVIRHMVE 283
K EA + + + E
Sbjct: 813 KHKEAMDFVSKIKE 826
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 117/268 (43%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG+ T+N ++ G+ G+ + + + + N P +YN ++ A + +
Sbjct: 337 NGYKPGTATYNSMLQVFGKAGVYTEALNILKEMEDNNCEPDAITYNELVAAYVRAGFHDE 396
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V M+ +G P+ +TY V+ A + G D+ + +M G P+ TYN +L
Sbjct: 397 GAAVIDTMASKGVMPNAITYTTVINAYGKAGDADKALEVFGQMKELGCVPNVCTYNNVLV 456
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+LGK + + +L MK G P + + T++ G EM N G P
Sbjct: 457 LLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQVLREMKNCGFEP 516
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D + +I++Y G ++ M+ G P + TYN+++ G + A +++
Sbjct: 517 DKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRGNWKAAESVV 576
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+M +G PN Y+ L+ AG +
Sbjct: 577 LDMRKKGFKPNETSYSLLLHCYSKAGNV 604
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 137/278 (49%), Gaps = 4/278 (1%)
Query: 12 TFNILICTCGEVGLARK---VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T +I + C G K V F K K + P + SY + L+G Q KL Y
Sbjct: 84 TEDIFLSICRAYGRVHKPLDAVRVFRKMKEYECEPSQKSYITVFAILVGENQLKLALRFY 143
Query: 69 QQMSDEGYAPDILTYNIVMCAKYR-LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M + G P + + N+++ A + G +D R+ EM G P +TY L+ L +
Sbjct: 144 RYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCR 203
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A L M+ P+V+ + +L+ GL ++ +LD+ +EMA+KG P+V
Sbjct: 204 LGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFT 263
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ ++ + +G +A +L D M+++ LPN+ TY++++ G C GK EA ++ M+
Sbjct: 264 YSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMK 323
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ +Y ++S + K EA + MV G
Sbjct: 324 LQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGG 361
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 9/293 (3%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G P + + N+LI C G + F + P +Y ++ L +
Sbjct: 146 MREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLG 205
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + ++++M + +P ++TY ++ + LD RLL+EM G P+ TY+
Sbjct: 206 KIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYS 265
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K AL LL+ M P+++ ++TL+ GL + G L D M +
Sbjct: 266 SLMDGHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQ 325
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY-------NSMIRGFCM 232
G PD Y +I+ + + +A + D M+ G PN T+ N +++G C
Sbjct: 326 GLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCT 385
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ A + M +RG + + +++LV+ N G L +A ++ MV G
Sbjct: 386 EHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDG 437
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 22/293 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P + T+ LI C G++G A+ E F + + P +Y +++H L
Sbjct: 182 MPNRGCPPHSYTYGTLIXGLCRLGKIGEAK---ELFKEMETKACSPTVVTYXSLIHGLCQ 238
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M+ +G P++ TY+ +M + G + LLD M P+ T
Sbjct: 239 SKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRRHLPNMIT 298
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-----F 172
Y+ L+H L K K A+ +L+ MK G P + ++ G D CK+ F
Sbjct: 299 YSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFC-----DICKFHEAANF 353
Query: 173 FDEMANKGCMPDVVCYT--VMITSYIAAG----ELEKAQDLFDGMITKGQLPNVFTYNSM 226
DEM G P+ + ++ V I + + G +A L+ M T+G + T++S+
Sbjct: 354 LDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFDSL 413
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ FC G +A ++ EM GC P+ +N +V + K+ E+ E+++
Sbjct: 414 VNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDRRKVRESAELVQ 466
>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Glycine max]
Length = 583
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 40/323 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T T+N LI G G + K++E + + N +P +YN ++ A
Sbjct: 118 MKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDE--NVKPNDRTYNILIQAWCT 175
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + V +M G PD++TYN + A + G+ ++ RL+ +M + P+ T
Sbjct: 176 KKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERT 235
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPS---------------------------- 149
I++ K AL L MKE+G DP+
Sbjct: 236 CGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLME 295
Query: 150 -------VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
V+ F+T+M+ S AG ++ C+ F++M G PD+ Y+++ Y+ AG+
Sbjct: 296 EFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPR 355
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA+ L M G PNV + ++I G+C AGK D A + ++M G +PN Y TL+
Sbjct: 356 KAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLI 415
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
A + +A E++ M E+G
Sbjct: 416 WGYGEAKQPWKAEELLTTMEERG 438
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 1/245 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +Y ++ AL +++K I + +++D G PD + N ++ A GK+D+ +
Sbjct: 54 KPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMK 113
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGL 160
+ +M G P TYN L+ G +P ++ LL M ++ P+ + L+
Sbjct: 114 IFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAW 173
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
L+ +M G PDVV Y M +Y GE E+A+ L M PN
Sbjct: 174 CTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETERAERLILKMPYNIVKPNE 233
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T +I G+C G EA + M+ G +PN +V+N+L+ + E +
Sbjct: 234 RTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTL 293
Query: 281 MVEKG 285
M E G
Sbjct: 294 MEEFG 298
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 109/236 (46%), Gaps = 1/236 (0%)
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+++ L+G + + V+ +++EG+ P ++TY ++ A R + LL ++ +G
Sbjct: 28 LMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNG 87
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD N +++ + K A+ + MKE G P+ + TL+ G AG
Sbjct: 88 MKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYESM 147
Query: 171 YFFDEMA-NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ M ++ P+ Y ++I ++ +LE+A ++ M+ G P+V TYN+M R
Sbjct: 148 KLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARA 207
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+ + A ++ +M PN ++S G + EA + M E G
Sbjct: 208 YAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLYRMKELG 263
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 104/229 (45%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
RT I+I + G + + + K P +N+++ L ++
Sbjct: 234 RTCGIIISGYCKEGNMPEALRFLYRMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTL 293
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M + G PD++T++ +M A G ++ + ++M ++G PD H Y+IL + +
Sbjct: 294 MEEFGIKPDVVTFSTIMNAWSSAGLMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQ 353
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P A LL M + G P+V+ FTT++ G AG +D ++M G P++ Y
Sbjct: 354 PRKAEALLTSMSKYGVQPNVVIFTTIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYET 413
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+I Y A + KA++L M +G +P + T + + G F EA
Sbjct: 414 LIWGYGEAKQPWKAEELLTTMEERGVVPEMSTMQLVADAWRAIGLFKEA 462
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%)
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
T LM+ L G + F+ + +G P ++ YT ++ + + L +
Sbjct: 26 TKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVAD 85
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+ N+MI F +GK DEA + ++M+ GC P YNTL+ AG+ E
Sbjct: 86 NGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIAGRPYE 145
Query: 274 AHEVIRHM 281
+ +++ M
Sbjct: 146 SMKLLEMM 153
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 88/221 (39%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G FN LI + V E + F +P +++ I++A
Sbjct: 259 MKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGL 318
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ M G PDI Y+I+ R G+ + LL M + G P+ +
Sbjct: 319 MENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFTT 378
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K A L M E+G P++ + TL+ G A + M +G
Sbjct: 379 IISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEERG 438
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+P++ ++ ++ A G ++A + +G + +L F
Sbjct: 439 VVPEMSTMQLVADAWRAIGLFKEANRILNGSEEESELDQEF 479
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F ++K + F+ S N +L AL+ + +E+VY++M ++ T+NI +
Sbjct: 151 EAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGL 210
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFD 147
R GKL++ +++M G SP+ TYN L+ G K A + M
Sbjct: 211 CRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKIC 270
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P+ + F TL+DG + N+ A K F+EM +G P++V Y +I G+LE+A DL
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+D M+ G PN+ TYN++I GFC EA + ++ + PN + +NT++
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390
Query: 268 AGKLAEAHEVIRHMVEKG 285
G + E + M+++G
Sbjct: 391 EGMMEEGFSLCSSMLDEG 408
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ N TFN LI C V A+K E K L +P +YN++++ L
Sbjct: 264 MLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGL---KPNIVTYNSLINGLCN 320
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M G P+I+TYN ++ + + + ++ D++ + P+ T
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ K +L + M + G P+V + L+ GL R +L A K +EM
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG DVV Y ++I + A+ L + M G PN TYN+++ G+CM GK
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + ME PN + YN L+ KL A+ ++ M+EKG
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKG 548
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 124/261 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N LI G + ++ + K +P +YNA+++ +
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V+ +S + P+++T+N ++ A + G +++ L M G P+ TYN
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + AA LLN M+ G V+ + L+DGL + + +EM N G
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y ++ Y G+L+ A ++ M + + PNV TYN +I+G+C K + A
Sbjct: 479 LKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAAN 538
Query: 241 TMMKEMESRGCNPNFLVYNTL 261
++ EM +G NPN Y+ +
Sbjct: 539 GLLNEMLEKGLNPNRTTYDIV 559
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 11/292 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL- 56
MI+ T TFNI I C G++ A +E K + P +YN ++
Sbjct: 191 MIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDM---KAWGISPNVVTYNTLVDGYCK 247
Query: 57 ---GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ YK E ++M P+ +T+N ++ + + + +EM + G P
Sbjct: 248 RGSAGKMYK-AEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKP 306
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TYN L++ L K A++L + M +G P+++ + L++G + + F
Sbjct: 307 NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVF 366
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+++ + +P+V+ + MI +Y G +E+ L M+ +G LPNV TYN +I G C
Sbjct: 367 DDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRK 426
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EME++G + + YN L+ L K A +++ M G
Sbjct: 427 QDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLG 478
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 91/197 (46%), Gaps = 5/197 (2%)
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
FH LL + GR G + +L +V K + A K+ GF S+ L+
Sbjct: 116 FHSLLLDGGRPGATALIIDMLVLAYV--KNLELHCAYEAFTRAKDYGFKLSLTSCNPLLS 173
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + + +Y + EM + ++ + + I AG+L KA+D + M G P
Sbjct: 174 ALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISP 233
Query: 219 NVFTYNSMIRGFC---MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
NV TYN+++ G+C AGK +A MKEM + PN + +NTL+ +A A
Sbjct: 234 NVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAK 293
Query: 276 EVIRHMVEKGKYIHLVS 292
+ M ++G ++V+
Sbjct: 294 KAFEEMQKQGLKPNIVT 310
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 75/157 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++YN ++ L + + + + +M ++G D++TYNI++ + K +L
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+EM G P+ TYN L+ K AALN+ M++ P+V+ + L+ G +
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
L+A +EM KG P+ Y ++ + G
Sbjct: 531 INKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 117/214 (54%), Gaps = 5/214 (2%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD++ + +V+ R +LD+ +L+ R+G PD+ TYN+ + L K ++ A
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL M E P+ + +T L+DGL +AG LD ++M KG P + YTV+I
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR----GCN 252
AG +E+A+ +F M+ G P+ F Y ++I+G C +GK +EA + KE +R
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVI-RHMVEKG 285
P+ + Y +L+ L AG++ EA +V VE+G
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERG 217
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 43/324 (13%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + AR+V + + F P +Y +I+ L + + + + +M + GY
Sbjct: 196 LCKAGRILEARQVFDDEAVER--GFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGY 253
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD +TY ++ + + + HR+ +M +SG TYNI+L L K + A
Sbjct: 254 EPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYA 313
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
M+E G +V+ ++ LMDG GN+ A F M ++GC P++V Y ++I
Sbjct: 314 TFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLC 373
Query: 197 AAGELEKAQ------------------------------------DLFDGMITKGQLPNV 220
AG+L KA +LF+ M+++G PN+
Sbjct: 374 RAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNL 433
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+Y+ ++ G C AG + A + +EM SRG P+ +V+NTL+ L AG++ EA EV R
Sbjct: 434 HSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE 493
Query: 281 MVEKG-----KYIHLVSKFKRYKR 299
+ + Y L+ R +R
Sbjct: 494 LERRSAPDAWSYWSLLDGLSRCER 517
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 128/272 (47%), Gaps = 8/272 (2%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A V+ER +++ P +YN + L + + ++M ++ P +TY
Sbjct: 26 AFSVLERAVRA---GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 82
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ + G+LD+ +L++M G SP TY +++ L K + A + M G
Sbjct: 83 LVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 142
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK----GCMPDVVCYTVMITSYIAAGEL 201
P +T L+ GL ++G + + E + +PDVV YT +I AG +
Sbjct: 143 CRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRI 202
Query: 202 EKAQDLFDG-MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+A+ +FD + +G +P+ TY S+I G C G+ +E C EM +RG P+ + Y
Sbjct: 203 LEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 262
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L+ A + +AH V R M++ G + V+
Sbjct: 263 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 46/324 (14%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N+ I C V A +++++ + K P +Y A++ LL + V
Sbjct: 44 TYNVFIDGLCKAERVDDAFQLLKKMDEKKCL---PTTVTYTALVDGLLKAGRLDEAMAVL 100
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+QM ++G +P + TY +V+ + G++++ R+ +M +G PD Y L+ L K
Sbjct: 101 EQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKS 160
Query: 129 DKPLAALNLL----------------------------------------NHMKEVGFDP 148
KP A L + E GF P
Sbjct: 161 GKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIP 220
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ +T+++DGL + G ++ F EM N+G PD V Y +I ++ A + KA ++
Sbjct: 221 DAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVY 280
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ G + + TYN ++ G C AG+ EA ME RGC + Y+ L+ +
Sbjct: 281 RQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSE 340
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
G ++ A E+ R M+++G +LVS
Sbjct: 341 GNVSAAVELFRRMLDRGCEPNLVS 364
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 143/320 (44%), Gaps = 37/320 (11%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+E GF A T+ +I ++G + ERF + + + P +Y A++ + +
Sbjct: 214 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 273
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
VY+QM G +TYNI++ + G++ + + M G TY+ L
Sbjct: 274 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 333
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE------ 175
+ AA+ L M + G +P+++ + ++ GL RAG L ++F++
Sbjct: 334 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 393
Query: 176 ------------------------------MANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
M ++G P++ Y++++ AG LE A
Sbjct: 394 CPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVAL 453
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++F M+++G P+V +N++IR C+AG+ DEA + +E+E R P+ Y +L+ L
Sbjct: 454 EIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDGL 512
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ EA + HM +G
Sbjct: 513 SRCERMEEARLLSFHMKLQG 532
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 5/280 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T +T+ ++I + G + F+ RP Y A++ L +
Sbjct: 103 MVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGK 162
Query: 61 YKLIEWVYQQMSDEGY----APDILTYNIVMCAKYRLGKLDQFHRLLD-EMGRSGFSPDF 115
+ +Y++ + + PD++TY ++ + G++ + ++ D E GF PD
Sbjct: 163 PEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDA 222
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY ++ L K + + M+ G++P + + L+DG +A + + +
Sbjct: 223 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G + V Y +++ AG + +A F M +G + V TY++++ GFC G
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
A + + M RGC PN + YN ++ L AGKLA+A+
Sbjct: 343 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 382
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 125/255 (49%), Gaps = 2/255 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G + T+NI++ + G + F+ + +Y+A++
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++++M D G P++++YNI++ R GKL + + +++ + PD +T+N
Sbjct: 343 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNA 402
Query: 121 LLHVL-GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LH L + D + L M G P++ ++ LMDG+ RAG L+ F EM ++
Sbjct: 403 FLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSR 462
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PDVV + +I AG +++A ++F + + P+ ++Y S++ G + +EA
Sbjct: 463 GVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEA 521
Query: 240 CTMMKEMESRGCNPN 254
+ M+ +GC P
Sbjct: 522 RLLSFHMKLQGCAPR 536
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%)
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+V +TV+I L++A + + + G P+ TYN I G C A + D+A
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++K+M+ + C P + Y LV L AG+L EA V+ MVEKG
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG 107
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P ++++N +M RLG LD+ RL M
Sbjct: 139 FNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A+DL D M KG P+ TY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G + A K M + + Y L+S L G+ +A +V+R M+ G
Sbjct: 319 DGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEGRYLDAEKVLREMLSVG 376
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 8/296 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V K + RP S+N +++ +
Sbjct: 127 ILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITK---WGLRPSVVSFNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 184 LGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL R G+L + DEM+
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG-QLPNVFTYNSMIRGFCMAGKF 236
KG PD + YT +I G+LE A + MI + QL +V Y ++I G C G++
Sbjct: 304 MKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDV-GYTALISGLCQEGRY 362
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +++EM S G P+ + Y +++ G + ++++ M G+ +V+
Sbjct: 363 LDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVVT 418
>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/302 (28%), Positives = 148/302 (49%), Gaps = 9/302 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQ 60
++GF + LI C G R+ V F K + +P +YN IL + +G+
Sbjct: 26 KDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPW 85
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K I +++ M + G PD TYN ++ R ++ + ++M GF PD TYN
Sbjct: 86 NK-ITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNT 144
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V GK + A+ +L M+ G PS++ + +L+ +R G L+ ++M +G
Sbjct: 145 LLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERG 204
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
DV YT M++ ++ G+ E A +F+ M T G PN+ T+N++I+ GKF E
Sbjct: 205 IKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMM 264
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKF 294
+ +E++ C P+ + +NTL++ G +E V + M E+ Y L+S +
Sbjct: 265 KVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAY 324
Query: 295 KR 296
R
Sbjct: 325 SR 326
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI C L + F K F P K +YN +L R+ K V ++M
Sbjct: 106 TYNTLITCCRRGSLYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREM 165
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +P I+TYN ++ A R G L++ L ++M G D TY +L + K
Sbjct: 166 EVNGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKD 225
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+A+ + M+ G P++ F L+ G F+E+ C+PD+V + +
Sbjct: 226 ESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTL 285
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + G + +F M G +P TYN++I + G FD+A M K M G
Sbjct: 286 LAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGI 345
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ YN +++ L G ++ +++ M
Sbjct: 346 TPDLSTYNAVLAALARGGLWEQSEKILAEM 375
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 132/286 (46%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G T T+N+++ G++G+ K+ F K P + +YN ++
Sbjct: 59 MEEEGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGS 118
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Y+ V++ M G+ PD +TYN ++ + ++ + +L EM +G SP TYN
Sbjct: 119 LYEEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYN 178
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ + A+ L N M E G V +T ++ G R G ++ F+EM
Sbjct: 179 SLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTA 238
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ + +I + G+ + +F+ + +P++ T+N+++ F G E
Sbjct: 239 GCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEV 298
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G P YNTL+S G +A + + M++ G
Sbjct: 299 SGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTG 344
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+N ++ GL + + + + +P + ++ ++LHA ++
Sbjct: 340 MLDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKE 399
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +++ P + ++ + L + R E+ R GFSPD T N
Sbjct: 400 IGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNA 459
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + G+ +LN MKE GF PS+ + +LM S++ N + + E+ KG
Sbjct: 460 MIAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKG 519
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD++ Y +I +Y G +++A +F M G +P+V TYN+ + + F+EA
Sbjct: 520 IKPDIISYNTVIFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAI 579
Query: 241 TMMKEMESRGCNPNFLVYNTLV 262
++ M GC PN YN+++
Sbjct: 580 DVVCYMIKHGCKPNQNTYNSVI 601
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 128/274 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V F + K F P +++YN ++ A + +Y++M
Sbjct: 281 TWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRM 340
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G PD+ TYN V+ A R G +Q ++L EM P+ T+ LLH G +
Sbjct: 341 LDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEI 400
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L L + +P + TL+ S+ L + F E+ KG PD+ M
Sbjct: 401 GRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAM 460
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I Y + K ++ + M G P++ TYNS++ + F+ + ++KE+ ++G
Sbjct: 461 IAIYGRRQMVTKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGI 520
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YNT++ G++ EA + M E G
Sbjct: 521 KPDIISYNTVIFAYCRNGRMKEASHIFSEMRESG 554
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 7/210 (3%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK+ LL+ + + GF PD + Y L+ + A+ + M+E G P+++ +
Sbjct: 12 GKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITY 71
Query: 154 TTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+++ + G + F+ M N G +PD Y +IT E+A +F+ M
Sbjct: 72 NVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEAAAVFEDMK 131
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ G +P+ TYN+++ + + + EA +++EME GC+P+ + YN+L+S G L
Sbjct: 132 SMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLISAYARDGLLE 191
Query: 273 EAHEVIRHMVEKG------KYIHLVSKFKR 296
EA E+ MVE+G Y ++S F R
Sbjct: 192 EAMELKNQMVERGIKLDVFTYTAMLSGFVR 221
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 7/184 (3%)
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++++LGK K A +LLN++ + GF+P V +T+L+ G F +M +
Sbjct: 3 VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62
Query: 180 GCMPDVVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC P ++ Y V++ Y G K LF+GM G LP+ +TYN++I ++E
Sbjct: 63 GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + ++M+S G P+ + YNTL+ + ++ EA EV+R M G Y L+S
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182
Query: 293 KFKR 296
+ R
Sbjct: 183 AYAR 186
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 14/289 (4%)
Query: 4 NGFPTTARTFNILICTCGEVGL-------ARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
NG + T+N LI GL ++VER IK +F +Y A+L +
Sbjct: 168 NGCSPSIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVF-------TYTAMLSGFV 220
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + V+++M G P+I T+N ++ GK + ++ +E+ PD
Sbjct: 221 RTGKDESAMRVFEEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIV 280
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+N LL V G+ + MK VGF P + TL+ SR G+ D + M
Sbjct: 281 TWNTLLAVFGQNGMDSEVSGVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRM 340
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ G PD+ Y ++ + G E+++ + M PN T+ S++ + +
Sbjct: 341 LDTGITPDLSTYNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEI 400
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ S P+ ++ TLV L EA + KG
Sbjct: 401 GRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLELKRKG 449
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 130/272 (47%), Gaps = 13/272 (4%)
Query: 27 RKVVERFIKSKLFN-----FRPFKNS--------YNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E +K K F + F +N + H ++ + V+ ++
Sbjct: 111 RKVLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITK 170
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P +++YN +M RLG LD+ +L M SG PD +TY++L++ L K K
Sbjct: 171 WGLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDX 230
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M G P+ + FTTL+DG + G +D + +M ++ +PD++ Y +I
Sbjct: 231 ANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 290
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L +A DL D M KG P+ TY ++I G C G D A K M
Sbjct: 291 GLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + Y L+S L G+ +A +++R M+ G
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMMREMLSVG 382
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL C G++ +A+ V + K + RP SYN +++ + +
Sbjct: 134 LECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIRL 190
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ TY++++ + K+D + L DEM G P+ T+
Sbjct: 191 GDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGVTF 250
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L+ DEM+
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSM 310
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+ +
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVD 370
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A MM+EM S G P+ Y +++ + G + + ++++ M G +V+
Sbjct: 371 AEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVT 424
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L+Q H L+DEM G PD TY L+
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G PD
Sbjct: 329 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTG 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I G++ K L M G P+V TYN ++ G
Sbjct: 389 TYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 142/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T T+N + +C G V ARK+++ + N P SYN +++
Sbjct: 298 MLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNK---NLMPDLVSYNTLIYGYTR 354
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ ++ AP ++TYN ++ RLG LD RL DEM + G PD T
Sbjct: 355 LGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFT 414
Query: 118 YNILLHVLGK-GDKPLA----------------------------------ALNLLNHMK 142
+ + K G+ P+A A + M
Sbjct: 415 FTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEML 474
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
GF P ++ + +DGL + GNL +M G +PD V YT +I +++ AG L
Sbjct: 475 ARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLR 534
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA+ LF M++KG P+V TY +I + + G+ A EM +G +PN + YN L+
Sbjct: 535 KARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALI 594
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L K+ +A+ M KG
Sbjct: 595 NGLCKVRKMDQAYNFFAEMQAKG 617
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIK----SKLFNFRPFKNSYNAILHALLGIRQYKLI 64
T+N LI C G++ +A ++ + IK +F F F + + +
Sbjct: 379 TYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTF-------VRGFCKMGNLPMA 431
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ +M + G PD Y + + +LG + + +EM GF PD TYN+ +
Sbjct: 432 KELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDG 491
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K A L+ M G P + +T+++ AG+L + F EM +KG P
Sbjct: 492 LHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPS 551
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV YTV+I SY G L+ A F M KG PNV TYN++I G C K D+A
Sbjct: 552 VVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFA 611
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EM+++G +PN Y L++ N G EA + + M+++
Sbjct: 612 EMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 651
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G + T++ LI C G++ A ++ E + P +YN I++ L
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAV---PTVVTYNTIMYGLCK 319
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M ++ PD+++YN ++ RLG + + L E+ +P T
Sbjct: 320 WGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVT 379
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + A+ L + M + G DP V FTT + G + GNL K FDEM
Sbjct: 380 YNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEML 439
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N+G PD Y I + G+ KA + + M+ +G P++ TYN I G G
Sbjct: 440 NRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLK 499
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++K+M G P+ + Y +++ AG L +A + M+ KG + +V+
Sbjct: 500 EASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT 554
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 142/320 (44%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T T+N ++ + + G+ ++ ++ + + P +YN +++ L +
Sbjct: 193 MVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGE 252
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + Q M G + TY+ ++ G++++ RL +EM G P TYN
Sbjct: 253 MEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNT 312
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + A LL+ M P ++ + TL+ G +R GN+ F E+ +
Sbjct: 313 IMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRS 372
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK----- 235
P VV Y +I G+L+ A L D MI G P+VFT+ + +RGFC G
Sbjct: 373 LAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAK 432
Query: 236 --FDE----------------------------ACTMMKEMESRGCNPNFLVYNTLVSNL 265
FDE A M +EM +RG P+ + YN + L
Sbjct: 433 ELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGL 492
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G L EA E+++ M+ G
Sbjct: 493 HKLGNLKEASELVKKMLYNG 512
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
VY M + G P ++TYN ++ + + G + + +LL +M G SP+ TYN+L++ L
Sbjct: 189 VYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLS 248
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A L+ M +G + SV + L+ G G ++ +EM ++G +P VV
Sbjct: 249 HSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVV 308
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ G + A+ L D M+ K +P++ +YN++I G+ G EA + E+
Sbjct: 309 TYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAEL 368
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
R P+ + YNTL+ L G L A + M++ G
Sbjct: 369 RYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 101/189 (53%), Gaps = 1/189 (0%)
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M G PD N +L +L D + A + N M E G P+V+ + T++D +
Sbjct: 156 KMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKK 215
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + +M GC P+ V Y V++ +GE+E+A++L M+ G +V+TY
Sbjct: 216 GMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTY 275
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ +IRG+C G+ +EA + +EM SRG P + YNT++ L G++++A +++ MV
Sbjct: 276 DPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVN 335
Query: 284 KGKYIHLVS 292
K LVS
Sbjct: 336 KNLMPDLVS 344
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 130/284 (45%), Gaps = 10/284 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G TF + C G + +A+++ + + L +P + +Y + L
Sbjct: 403 MIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL---QPDRFAYITRIVGELK 459
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M G+ PD++TYN+ + ++LG L + L+ +M +G PD T
Sbjct: 460 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 519
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++H A L M G PSV+ +T L+ + G L F EM
Sbjct: 520 YTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ Y +I ++++A + F M KG PN +TY +I C G +
Sbjct: 580 EKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQ 639
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
EA + K+M R P+ + +L+ +L KL V+RH+
Sbjct: 640 EALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKL----HVVRHL 679
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 133/250 (53%), Gaps = 1/250 (0%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
++F +P SYN++L+AL+ ++ E + G +P++ TYNI++ R +
Sbjct: 81 EIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQF 140
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D+ LL+ M GFSPD +Y L++ L K AL L + M E G P V + L
Sbjct: 141 DKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNIL 200
Query: 157 MDGLSRAGN-LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+DG + G+ L+A + + + P++ Y VMI G+ +++ +++ M
Sbjct: 201 IDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNE 260
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ +++TY+++I G C +G D A + KEM G +P+ +VYNT+++ AG++ E
Sbjct: 261 RGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECL 320
Query: 276 EVIRHMVEKG 285
E+ + M ++G
Sbjct: 321 ELWKVMEKEG 330
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 2/221 (0%)
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++Q+M + G P I +YN ++ A K D+ G SP+ TYNIL+ +
Sbjct: 75 IFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKIS 134
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + A LLN M GF P V + TL++ L++ G + FDEM +G PDV
Sbjct: 135 CRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDV 194
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMK 244
CY ++I + G++ A ++++ ++ + PN+ +YN MI G C GKFDE+ +
Sbjct: 195 ACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWH 254
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ + Y+TL+ L +G L A V + M E G
Sbjct: 255 RMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENG 295
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 142/315 (45%), Gaps = 48/315 (15%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSK----LFNFRPFKNSYNAILHALLGIRQYKLI 64
++N++I C CG+ + ++ R K++ L+ +Y+ ++H L G
Sbjct: 232 SYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLY-------TYSTLIHGLCGSGNLDGA 284
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS------------ 112
VY++M++ G +PD++ YN ++ R G++++ L M + G
Sbjct: 285 TRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGL 344
Query: 113 ----------------------PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
D TY +L+H L K AL++L + D
Sbjct: 345 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDT 404
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
++++++GL R G LD D+M GC P+ +I ++ A +LE A F
Sbjct: 405 FAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGN 464
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M++KG P V TYN++I G A +F EA ++KEM +G PN + Y+ L++ L K
Sbjct: 465 MVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKK 524
Query: 271 LAEAHEVIRHMVEKG 285
L A + +EKG
Sbjct: 525 LDMALNLWCQALEKG 539
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 109/214 (50%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D Y+ ++ R G+LD+ +LD+M + G P+ + N +++ + K AL
Sbjct: 403 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFF 462
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+M G P+V+ + TL++GLS+A EM KG P+++ Y++++
Sbjct: 463 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQG 522
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
+L+ A +L+ + KG P+V +N +I G C +GK ++A + EM+ R C PN + +
Sbjct: 523 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTH 582
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
NTL+ A ++ H+++ G ++S
Sbjct: 583 NTLMEGFYKVRDFERASKIWDHILQYGLQPDIIS 616
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 108/214 (50%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
NA+++ + + + + M +G P ++TYN ++ + + + + L+ EM +
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQ 502
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G+ P+ TY++L++ L +G K ALNL E GF P V ++ GL +G ++
Sbjct: 503 KGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVED 562
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ EM + C+P++V + ++ + + E+A ++D ++ G P++ +YN ++
Sbjct: 563 ALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLK 622
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G C + +A + + RG P + +N LV
Sbjct: 623 GLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 656
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 117/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+++++ L + + V QM+ G P+ N V+ R KL+ R M
Sbjct: 406 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNM 465
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN L++ L K ++ A L+ M + G+ P+++ ++ LM+GL + L
Sbjct: 466 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKL 525
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + + KG PDV + ++I ++G++E A L+ M + +PN+ T+N++
Sbjct: 526 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTL 585
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ GF F+ A + + G P+ + YN + L + ++++A + V++G
Sbjct: 586 MEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 92/188 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN +++ L ++ + ++M +G+ P+++TY+++M + KLD L
Sbjct: 472 PTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNL 531
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ GF PD +NI++H L K AL L + MK+ P+++ TLM+G +
Sbjct: 532 WCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYK 591
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ + +D + G PD++ Y + + + + A + + +G LP T
Sbjct: 592 VRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAIT 651
Query: 223 YNSMIRGF 230
+N +++G+
Sbjct: 652 WNILVQGY 659
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ T+++L +C ++ +A + + ++ F+P +N I+H L
Sbjct: 500 MLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEK---GFKPDVKMHNIIIHGLCS 556
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y +M P+++T+N +M Y++ ++ ++ D + + G PD +
Sbjct: 557 SGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIIS 616
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
YNI L L + A+ LN + G P+ + + L+ G
Sbjct: 617 YNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQG 658
>gi|449436409|ref|XP_004135985.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 1/285 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQ 60
+ G+ T F+ LI G+ G + ++ F K+ +P +YNA++ A G +
Sbjct: 214 LSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVE 273
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + ++++M G PD +TYN ++ R G + L +EM G D TYN
Sbjct: 274 FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + KG + A ++ M P+V+ ++T+ DG ++AG L+ ++EM G
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG 393
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D V Y +++ Y G E A + M + G +V TYN+++ G+ GKF+E
Sbjct: 394 IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVT 453
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ PN L Y+TL+ EA EV R + G
Sbjct: 454 RVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 15/274 (5%)
Query: 16 LICTCGEVG---LARKVVERFIK----SKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+I T G +G LA+ V E + + +F F ++Y + I+ V+
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIK-------VF 245
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M G P+++TYN V+ A + G + + + +EM R+G PD TYN LL V +
Sbjct: 246 ESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSR 305
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
G AA NL N M + G D V + TL+D + + G +D EM K +P+VV
Sbjct: 306 GGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVT 365
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ M Y AG LE A +L++ M G + +YN+++ + G+F++A + KEM
Sbjct: 366 YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMG 425
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
S G + + YN L+ GK E V + M
Sbjct: 426 SSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+A++ L + + +L + V++ EGY + ++ ++ A + G D+ ++ + M
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLA-ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG P+ TYN ++ GKG + + M G P + + +L+ SR G +
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + F+EM ++G DV Y ++ + G+++ A ++ M K LPNV TY++M
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ AG+ ++A + EM+ G + + YNTL+S G+ +A +V + M G
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 14/269 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---AR----KVVERFIKSKLFNFRPFKNSYNAILH 53
M+ NG T+N L+ C GL AR ++++R I +F +YN +L
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVF-------TYNTLLD 336
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A+ Q L + +M + P+++TY+ + + G+L+ L +EM G
Sbjct: 337 AVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGL 396
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YN LL + K + AL + M G V+ + L+DG + G + F
Sbjct: 397 DRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVF 456
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM P+++ Y+ +I Y E+A ++F G +V Y+ +I C
Sbjct: 457 KEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKN 516
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G D A ++ EM G PN + YN+++
Sbjct: 517 GLVDSAVLLLDEMTKEGIRPNVVTYNSII 545
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 1/290 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
+G T+N +I CG+ G+ ++VVE F + +P + +YN++L ++
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++ +M D G D+ TYN ++ A + G++D + ++ EM P+ TY+ +
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + ALNL N MK +G + + TL+ ++ G + EM + G
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVK 430
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
DVV Y ++ Y G+ + +F M PN+ TY+++I + ++EA +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+E + G + ++Y+ L++ L G + A ++ M ++G ++V+
Sbjct: 491 FREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVT 540
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N L +C G++ LA +++ K+ P +Y+ +
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKIL---PNVVTYSTMADGYAK 375
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y +M G D ++YN ++ +LG+ + ++ EMG SG D T
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL GK K + MK+ P++L ++TL+D S+ + F E
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 495
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
G DVV Y+ +I + G ++ A L D M +G PNV TYNS+I F
Sbjct: 496 QAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 171 YFFDEMANKG-CMPDVVCY-----------------TVMITSYIAAGELEKAQDLFDGMI 212
+ E+ N+G C + C+ + MI++ G++E A+ +F+ +
Sbjct: 155 FLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETAL 214
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG-KL 271
++G VF ++++I + +G FDEA + + M+ G PN + YN ++ G +
Sbjct: 215 SEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEF 274
Query: 272 AEAHEVIRHMVEKG 285
E+ M+ G
Sbjct: 275 KRVVEIFEEMLRNG 288
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 38/165 (23%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNA+L ++ + V+++M + P++LT
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT------------------------ 470
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
Y+ L+ V KG A+ + K+ G V+ ++ L++ L + G +
Sbjct: 471 -----------YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLV 519
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
D+ DEM +G P+VV Y +I ++ G A+ L DG+
Sbjct: 520 DSAVLLLDEMTKEGIRPNVVTYNSIIDAF---GRSTTAEFLVDGV 561
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T+N L+ G+ G +V F + K P +Y+ ++
Sbjct: 424 MGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSL 483
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y+ V+++ G D++ Y+ ++ A + G +D LLDEM + G P+ TYN
Sbjct: 484 YEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNS 543
Query: 121 LLHVLGK 127
++ G+
Sbjct: 544 IIDAFGR 550
>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
Length = 816
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 119/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N ++ A ++ +M D G P ++TY V+ A R+GK+D
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++M G PD + Y+ L+ L A L++ + G ++ F ++++ L +
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + + FD N G PD V Y +++ Y G++EKA +FD M++ G PNV
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +++ G+C G+ DE ++ +EM +G P+ ++YN ++ L AG+ A M
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633
Query: 283 EKG 285
E G
Sbjct: 634 ESG 636
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 131/277 (47%), Gaps = 4/277 (1%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++NIL+ C G+ G A ++ R + P +YN ++ ++
Sbjct: 186 SYNILLKSLCNQGKSGQADDLL-RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 244
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD++TY+ V+ A + +D+ L +M G PD TYN L++
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ + M+ P V+ TLM L + G + + FD MA KG PDV Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+M+ Y G L DLFD M+ G P + T+N +I+ + G D+A + EM
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 424
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y T+++ L GK+ +A E M+++G
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 126/267 (47%), Gaps = 7/267 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L +++V+R I L +Y++++HAL R E +QM ++G PD TYN
Sbjct: 243 LFKEMVQRGIPPDLV-------TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYN 295
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ G+ + R+ EM R PD N L+ L K K A ++ + M
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G +P V +T +++G + G L FD M G P + + V+I +Y G L+KA
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKA 415
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+F+ M G P+V TY ++I C GK D+A +M +G P+ Y+ L+
Sbjct: 416 MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G L +A E+I ++ G + +V
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIV 502
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T++ ++ C + A + + + + P +YN +++
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL---PDNWTYNNLIYGYSS 303
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+K V+++M + PD++ N +M + + GK+ + + D M G +PD +
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I+L+ + +L + M G P + F L+ + G LD F+EM
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 423
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P VV Y +I + G+++ A + F+ MI +G +P+ + Y+ +I+GFC G
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ E+ + G + + + ++++NL G++ +A + V G
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 136/320 (42%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+N LI G ++ V F + + + P + N ++ +L +
Sbjct: 282 MVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK 341
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V+ M+ +G PD+ +Y I++ G L L D M G +P T+N+
Sbjct: 342 IKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNV 401
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ A+ + N M++ G P V+ + T++ L R G +D F++M ++G
Sbjct: 402 LIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Query: 181 CMPDVVCYTVMITSYIAAGELEKA-----------------------------------Q 205
+PD Y +I + G L KA Q
Sbjct: 462 VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQ 521
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++FD + G P+ YN ++ G+C+ GK ++A + M S G PN + Y TLV+
Sbjct: 522 NIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY 581
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G++ E + R M++KG
Sbjct: 582 CKIGRIDEGLSLFREMLQKG 601
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 116/248 (46%), Gaps = 2/248 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGKLDQFHRLLD 104
SYN +L +L + + + + M++ G +PD++ YN V+ ++ G +++ L
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM + G PD TY+ ++H L K A L M G P + L+ G S G
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F EM + +PDVV ++ S G++++A+D+FD M KGQ P+VF+Y
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M+ G+ G + + M G P +N L+ N G L +A + M +
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 285 GKYIHLVS 292
G H+V+
Sbjct: 426 GVKPHVVT 433
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDG 159
LL G PD +YNILL L K A +LL M E G P V+ + T++DG
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ G+++ F EM +G PD+V Y+ ++ + A ++KA+ M+ KG LP+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+TYN++I G+ G++ EA + KEM + P+ + NTL+ +L GK+ EA +V
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350
Query: 280 HMVEKGK 286
M KG+
Sbjct: 351 TMAMKGQ 357
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TFN+LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 387 MLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G PD Y+ ++ G L + L+ E+ +G D +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P + + LMDG G ++ FD M + G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y G +++ LF M+ KG P+ YN +I G AG+ A
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G N Y+ ++ L
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGL 651
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SP +TY IL+ + +P AL + G + + L+ G A
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164
Query: 167 D-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL--PNVFTY 223
D A GC+PDV Y +++ S G+ +A DL M G + P+V Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I GF G ++AC + KEM RG P+ + Y+++V L A + +A +R MV
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284
Query: 284 KG 285
KG
Sbjct: 285 KG 286
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A+ + + + L P YN ++ + + + V+ M G
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGL---HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+++ Y ++ ++G++D+ L EM + G P YNI++ L + + + A
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M E G + ++ ++ GL + D + F E+ D++ MI
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+E+A+DLF + G +P TY+ MI G +EA M M++ GC P+
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSR 747
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ N +V L ++ A + + E+
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDER 775
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A +N+L+ C G++ A +V + + + + P Y +++ I +
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI---EPNVVGYGTLVNGYCKIGRI 587
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M +G P + YNI++ + G+ EM SG + + TY+I+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L K A+ L ++ + ++ T++ G+ + ++ K F ++ G
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P V Y++MIT+ I G +E+A+D+F M G P+ N ++R + A
Sbjct: 708 VPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 767
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ +++ R + L LV + G E
Sbjct: 768 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 82/212 (38%), Gaps = 50/212 (23%)
Query: 89 AKYRLGKL--DQFHRLLDEMGRSGFSPDFHTYNILLHVLGK-------GDKPLAALNLLN 139
A+ R G L ++ H LLDE+ R G N L L + G P A+ L N
Sbjct: 38 ARVREGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFN 97
Query: 140 HMKEVGFDPSVLHFTT-----LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
P VL T+ LMD +RA + FF ++ G D + I S
Sbjct: 98 RAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAI-----IAS 152
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC-TMMKEMESRGCNP 253
+ +++GFC A + DEA ++ GC P
Sbjct: 153 H------------------------------LLKGFCEAKRTDEALDILLHRTPELGCVP 182
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN L+ +L N GK +A +++R M E G
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGG 214
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 111/203 (54%)
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
NIV+ R G + + L+ EMGR SPD +YN L++ L K K A+ LL M+
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P+ + TTLMDGL + G +D + M KG DVV Y +I+ + G L++
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
++LFD M+ KG NV TY+ ++ G C G++ EA T++ M G +P+ + Y L+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 264 NLRNAGKLAEAHEVIRHMVEKGK 286
L G+ A +++ MVEKG+
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGE 204
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 120/226 (53%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M + +PDI++YN ++ + KL + LL EM +G P+ T L+ L
Sbjct: 20 LIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLC 79
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A+ LL MK+ GFD V+ + TL+ G GNLD K FDEM KG +VV
Sbjct: 80 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 139
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ ++ G+ ++A + + M G P+V TY +I G C G+ A ++ M
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G P+ + YN L+S L G + +A +++R M+EKGK +V+
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVT 245
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 142/291 (48%), Gaps = 4/291 (1%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+N L +C G+V A K+ ++ P ++N ++ L
Sbjct: 234 MIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE-NCLEPNVFTFNMLIGGLCK 292
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M +G +++TYN+++ + GK+ + L ++ GF P+ T
Sbjct: 293 EGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFT 352
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL+ K A L M+ G +P++ + TLM L + G+L+ K F EM
Sbjct: 353 YSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMG 412
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N C PD++ + MI + AG+ + ++L M+ G P+ T++++I G+ D
Sbjct: 413 NANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELD 472
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
EA + ++ M + G P+ LVY++L+ L + G E ++ M KG +
Sbjct: 473 EAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVL 523
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M +G+ D++ Y ++ G LD+ L DEM G S + TY+ L+H L
Sbjct: 90 LLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLC 149
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A +LN M E G P V+ +T L+DGL + G + M KG P V
Sbjct: 150 RLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNV 209
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+++ G + A + MI KG+ +V TYN++++G C GK DEA + M
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 269
Query: 247 -ESRGC-NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ C PN +N L+ L G+L +A ++ R MV+KG +LV+
Sbjct: 270 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT 317
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 115/221 (52%), Gaps = 2/221 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +G + +++TY+ ++ RLG+ + + +L+ M G PD TY L+ L
Sbjct: 125 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 184
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A++LLN M E G +PS + + L+ GL + G + M KG DVV
Sbjct: 185 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV 244
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQL--PNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y ++ G++++A LF+ M PNVFT+N +I G C G+ +A + +
Sbjct: 245 TYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR 304
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M +G N + YN L+ AGK+ EA E+ + +++ G
Sbjct: 305 KMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLG 345
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 138/297 (46%), Gaps = 22/297 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-------RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G + T+N+L+ + GL R ++E+ K+ + +YN ++
Sbjct: 199 MVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVV-------TYNTLMK 251
Query: 54 ALLGIRQYKLIEWVYQQMSDEG--YAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGR 108
L + ++ M D P++ T+N++ +C + RL K + HR +M +
Sbjct: 252 GLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHR---KMVK 308
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G + TYN+LL K K A+ L + ++GF P+ ++ L+DG + L+
Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 368
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
K F EM G P + Y ++ S G LE+A+ LF M P++ ++N+MI
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 428
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G AG F + +M G P+ L ++TL++ L G+L EA + MV G
Sbjct: 429 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 125/272 (45%), Gaps = 37/272 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++H L + Q+K V M++ G PD++TY ++ + G+ LL+ M
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P TYN+LL L K + A +L M E G V+ + TLM GL G +
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259
Query: 167 D-ACKYF---FD---------------------------------EMANKGCMPDVVCYT 189
D A K F FD +M KG ++V Y
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ + AG++++A +L+ ++ G +PN FTY+ +I GFC + A + EM +
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G NP YNTL+++L G L +A + + M
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEM 411
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 131/280 (46%), Gaps = 8/280 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGI 58
EN TFN+LI C G + A K+ + +K N +YN +L L
Sbjct: 273 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV----TYNMLLGGCLKA 328
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K +++Q+ D G+ P+ TY+I++ ++ L+ L EM G +P Y
Sbjct: 329 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 388
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L K A +L M +P ++ F T++DG +AG+ K +M
Sbjct: 389 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 448
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PD + ++ +I GEL++A+ + M+ G P+ Y+S+++G G E
Sbjct: 449 MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTE 508
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++ +M ++G + + +T+++ L ++ + + E++
Sbjct: 509 IINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 83/174 (47%)
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI+L L + A+ L+ M P ++ + TL++GL +A L EM
Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC P+ V T ++ G +++A +L + M KG +V Y ++I GFC G D
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM +G + N + Y+ LV L G+ EA+ V+ M E G + +V+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVT 175
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 140/281 (49%), Gaps = 5/281 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +GF T++IL G ++ ++ F KS + + +L+ L +
Sbjct: 297 MVPDGF-----TYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGK 351
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E V Q + + G P + YN ++ + G+L+ +M PD TYN
Sbjct: 352 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 411
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K ++ A +LL M++ G +P+V F TL+D R G L+ C EM G
Sbjct: 412 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 471
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ ++ G++ +A + D M K LPN YN++I + G D+A
Sbjct: 472 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 531
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++++M+S G +P+ + YN L+ L N +++EA E+I +
Sbjct: 532 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 572
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P A ++N++I G VE F + P +YN ++ + +
Sbjct: 193 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFS 252
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ QM G P+ +TYN+++ R G++ + LLDEM PD TY+IL L
Sbjct: 253 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 312
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A L+L + G + L++GL + G + + + N G +P V
Sbjct: 313 RNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 372
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y GELE A F M ++ P+ TYN++I G C A + A ++ EM
Sbjct: 373 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 432
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G NP +NTL+ G+L + V+ M E G ++VS
Sbjct: 433 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 478
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 140/287 (48%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++NG T +IL+ C G+V +A +V++ + + L P + YN +++
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV---PTRVIYNTLINGYCQT 384
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + QM PD +TYN ++ + ++ LL EM +G +P T+
Sbjct: 385 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G+ + +L+ M+E G P+V+ + ++++ + G + D+M +
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 504
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +P+ Y +I +Y+ G ++A L + M + G P++ TYN +I+G C + E
Sbjct: 505 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 564
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ + + P+ + YNTL+S G + +A ++ + M + G
Sbjct: 565 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 6/303 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G T +N LI + G F + K + +P +YNA+++ L +
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D G P + T+N ++ A R G+L++ +L EM +G P+ +Y
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 481
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K K A+ +L+ M P+ + ++D G D ++M + G
Sbjct: 482 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 541
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P +V Y ++I ++ +A+++ + + +P+ +YN++I C G D+A
Sbjct: 542 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 601
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK----GKYIH--LVSKF 294
+ + M G Y+ L+S L AG+L E + + M++ IH +V +
Sbjct: 602 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAY 661
Query: 295 KRY 297
+Y
Sbjct: 662 SKY 664
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDFHTYNILLHVLGKGD 129
++ G PD +N + A G L + +L MGR G P+ +YN+++ + +
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ + + M E P+ + + T++DG + G+L+A D+M G P+ + Y
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN 270
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
V+++ AG + + L D M ++ +P+ FTY+ + G G ++ +
Sbjct: 271 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKN 330
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + L++ L GK++ A EV++ +V G
Sbjct: 331 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 366
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 73/205 (35%), Gaps = 35/205 (17%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A+ +N +I E G + K K P +YN ++ L Q E +
Sbjct: 511 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 570
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+S+ PD ++YN ++ A G +D+ L M + G TY+
Sbjct: 571 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH---------- 620
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
L+ GL AG L +Y + +M +P +
Sbjct: 621 -------------------------QLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHN 655
Query: 190 VMITSYIAAGELEKAQDLFDGMITK 214
+M+ +Y G KA+DL M+ K
Sbjct: 656 IMVEAYSKYGNEIKAEDLRKEMLQK 680
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 137/278 (49%), Gaps = 4/278 (1%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T ++ + C G V + F K + F +P + SY + L+ K Y
Sbjct: 84 TEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFY 143
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++M ++G P +++ NI++ A + + ++ RL EM G PD +TY L++ L K
Sbjct: 144 KEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCK 203
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A LL+ M+E G PSV+ +T+L+ GL ++ NLD +EM G P+V
Sbjct: 204 LGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFT 263
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ ++ +G +A +L + M+ + LPN+ TY+++I G C GK EA ++ M
Sbjct: 264 YSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMR 323
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ +Y ++S L A EA I M G
Sbjct: 324 LQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGG 361
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 42/284 (14%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKY-----RL 93
FR N++ A++H L+ + Q++ E + ++M E D+ + +C Y L
Sbjct: 46 FRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVF---LTICRGYGRVHRPL 102
Query: 94 GKLDQFHRLLD-------------------------------EMGRSGFSPDFHTYNILL 122
+ FH++ D EM G P + NIL+
Sbjct: 103 DAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILI 162
Query: 123 HVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L K ++ + +A L M G P + TL++GL + G + K DEM KG
Sbjct: 163 KALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGL 222
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV YT +I + L++A +L + MI G PNVFTY+S++ G C +G +A
Sbjct: 223 SPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAME 282
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M R PN + Y+TL++ L GK EA E++ M +G
Sbjct: 283 LLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQG 326
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 97/188 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M + G PD TY ++ +LGK+ Q LLDEM G SP +Y L+H L
Sbjct: 178 LFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLC 237
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A+ LL M G +P+V +++LMDGL ++G+ + M + +P++V
Sbjct: 238 QSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMV 297
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I G+ +A ++ D M +G P+ Y +I G C A + EA + EM
Sbjct: 298 TYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEM 357
Query: 247 ESRGCNPN 254
G +PN
Sbjct: 358 ALGGISPN 365
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 13/288 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G + T+ LI C G++ A+++++ + L P SY +++H L
Sbjct: 182 MPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGL---SPSVVSYTSLIHGLCQ 238
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++M G P++ TY+ +M + G Q LL+ M R P+ T
Sbjct: 239 SNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVT 298
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L++ L K K A+ +L+ M+ G P + ++ GL A N F DEMA
Sbjct: 299 YSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMA 358
Query: 178 NKGCMPDVVCYT--VMITSYIAAG-----ELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
G P+ +T V + + + G + +A L+ M T+G + T++ +++ F
Sbjct: 359 LGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCF 418
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
C G ++A +++EM GC P+ ++N L+ L + K+ E E++
Sbjct: 419 CKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELL 466
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 126/293 (43%), Gaps = 8/293 (2%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G P T + NILI C F + +P +Y +++ L +
Sbjct: 146 MREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLG 205
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + +M ++G +P +++Y ++ + LD+ LL+EM +G P+ TY+
Sbjct: 206 KISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYS 265
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K A+ LL M P+++ ++TL++GL + G D M +
Sbjct: 266 SLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQ 325
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN-------VFTYNSMIRGFCM 232
G PD Y +I+ AA ++A + D M G PN V +N +++G C
Sbjct: 326 GLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCN 385
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + M +RG + ++ LV G L +A ++ M+ G
Sbjct: 386 NVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDG 438
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 3/186 (1%)
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LD 167
+GF D +T+ ++H L ++ A +L MK+ + + F T+ G R LD
Sbjct: 44 NGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLD 103
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + F +M + P Y + + +++A + M KG P V + N +I
Sbjct: 104 AIRVFH-KMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILI 162
Query: 228 RGFCMAGK-FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ C + + A + +EM +RGC P+ Y TL++ L GK+++A E++ M EKG
Sbjct: 163 KALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGL 222
Query: 287 YIHLVS 292
+VS
Sbjct: 223 SPSVVS 228
>gi|449518511|ref|XP_004166285.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic-like [Cucumis sativus]
Length = 868
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 137/285 (48%), Gaps = 1/285 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQ 60
+ G+ T F+ LI G+ G + ++ F K+ +P +YNA++ A G +
Sbjct: 214 LSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVE 273
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + ++++M G PD +TYN ++ R G + L +EM G D TYN
Sbjct: 274 FKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVFTYNT 333
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + KG + A ++ M P+V+ ++T+ DG ++AG L+ ++EM G
Sbjct: 334 LLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLG 393
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D V Y +++ Y G E A + M + G +V TYN+++ G+ GKF+E
Sbjct: 394 IGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVT 453
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ PN L Y+TL+ EA EV R + G
Sbjct: 454 RVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAG 498
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 15/274 (5%)
Query: 16 LICTCGEVG---LARKVVERFIK----SKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+I T G +G LA+ V E + + +F F ++Y + I+ V+
Sbjct: 193 MISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIK-------VF 245
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M G P+++TYN V+ A + G + + + +EM R+G PD TYN LL V +
Sbjct: 246 ESMKVSGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSR 305
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
G AA NL N M + G D V + TL+D + + G +D EM K +P+VV
Sbjct: 306 GGLWEAARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVT 365
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ M Y AG LE A +L++ M G + +YN+++ + G+F++A + KEM
Sbjct: 366 YSTMADGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMG 425
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
S G + + YN L+ GK E V + M
Sbjct: 426 SSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEM 459
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 1/238 (0%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+A++ L + + +L + V++ EGY + ++ ++ A + G D+ ++ + M
Sbjct: 191 SAMISTLGRLGKVELAKGVFETALSEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKV 250
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLA-ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG P+ TYN ++ GKG + + M G P + + +L+ SR G +
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + F+EM ++G DV Y ++ + G+++ A ++ M K LPNV TY++M
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ AG+ ++A + EM+ G + + YNTL+S G+ +A +V + M G
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSG 428
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 14/269 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---AR----KVVERFIKSKLFNFRPFKNSYNAILH 53
M+ NG T+N L+ C GL AR ++++R I +F +YN +L
Sbjct: 284 MLRNGVQPDRITYNSLLAVCSRGGLWEAARNLFNEMIDRGIDQDVF-------TYNTLLD 336
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A+ Q L + +M + P+++TY+ + + G+L+ L +EM G
Sbjct: 337 AVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMADGYAKAGRLEDALNLYNEMKFLGIGL 396
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YN LL + K + AL + M G V+ + L+DG + G + F
Sbjct: 397 DRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVF 456
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM P+++ Y+ +I Y E+A ++F G +V Y+ +I C
Sbjct: 457 KEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKN 516
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G D A ++ EM G PN + YN+++
Sbjct: 517 GLVDSAVLLLDEMTKEGIRPNVVTYNSII 545
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 1/290 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
+G T+N +I CG+ G+ ++VVE F + +P + +YN++L ++
Sbjct: 251 SGLKPNLVTYNAVIDACGKGGVEFKRVVEIFEEMLRNGVQPDRITYNSLLAVCSRGGLWE 310
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
++ +M D G D+ TYN ++ A + G++D + ++ EM P+ TY+ +
Sbjct: 311 AARNLFNEMIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKILPNVVTYSTMA 370
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + ALNL N MK +G + + TL+ ++ G + EM + G
Sbjct: 371 DGYAKAGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVK 430
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
DVV Y ++ Y G+ + +F M PN+ TY+++I + ++EA +
Sbjct: 431 KDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEV 490
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+E + G + ++Y+ L++ L G + A ++ M ++G ++V+
Sbjct: 491 FREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVT 540
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 107/233 (45%), Gaps = 6/233 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N L +C G++ LA +++ K+ P +Y+ +
Sbjct: 319 MIDRGIDQDVFTYNTLLDAVCKGGQMDLAYEIMLEMPGKKIL---PNVVTYSTMADGYAK 375
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y +M G D ++YN ++ +LG+ + ++ EMG SG D T
Sbjct: 376 AGRLEDALNLYNEMKFLGIGLDRVSYNTLLSIYAKLGRFEDALKVCKEMGSSGVKKDVVT 435
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL GK K + MK+ P++L ++TL+D S+ + F E
Sbjct: 436 YNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSLYEEAMEVFREFK 495
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
G DVV Y+ +I + G ++ A L D M +G PNV TYNS+I F
Sbjct: 496 QAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNSIIDAF 548
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Query: 171 YFFDEMANKG-CMPDVVCY-----------------TVMITSYIAAGELEKAQDLFDGMI 212
+ E+ N+G C + C+ + MI++ G++E A+ +F+ +
Sbjct: 155 FLLRELGNRGECWKAIRCFDFALVREGRKNERGKLASAMISTLGRLGKVELAKGVFETAL 214
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG-KL 271
++G VF ++++I + +G FDEA + + M+ G PN + YN ++ G +
Sbjct: 215 SEGYGNTVFAFSALISAYGKSGYFDEAIKVFESMKVSGLKPNLVTYNAVIDACGKGGVEF 274
Query: 272 AEAHEVIRHMVEKG 285
E+ M+ G
Sbjct: 275 KRVVEIFEEMLRNG 288
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 67/165 (40%), Gaps = 38/165 (23%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNA+L ++ + V+++M + P++LT
Sbjct: 435 TYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLT------------------------ 470
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
Y+ L+ V KG A+ + K+ G V+ ++ L++ L + G +
Sbjct: 471 -----------YSTLIDVYSKGSLYEEAMEVFREFKQAGLKADVVLYSELINALCKNGLV 519
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
D+ DEM +G P+VV Y +I ++ G A+ L DG+
Sbjct: 520 DSAVLLLDEMTKEGIRPNVVTYNSIIDAF---GRSTTAEFLVDGV 561
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 57/127 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T+N L+ G+ G +V F + K P +Y+ ++
Sbjct: 424 MGSSGVKKDVVTYNALLDGYGKQGKFNEVTRVFKEMKKDRVFPNLLTYSTLIDVYSKGSL 483
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y+ V+++ G D++ Y+ ++ A + G +D LLDEM + G P+ TYN
Sbjct: 484 YEEAMEVFREFKQAGLKADVVLYSELINALCKNGLVDSAVLLLDEMTKEGIRPNVVTYNS 543
Query: 121 LLHVLGK 127
++ G+
Sbjct: 544 IIDAFGR 550
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 131/268 (48%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E GF T+N+ I +VG R V F + P +YN+++ L +
Sbjct: 318 EWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVS 377
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + M G PDI+T I++ + +LDQ L +++ SG +PD +Y IL+
Sbjct: 378 GAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILI 437
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
H + A+NLL M P ++ ++ L+DGL R+G + +EM KG +
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD + Y++++ + L++A LF+ MI +G P+V Y MI G+C + + DEA +
Sbjct: 498 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINL 557
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+EM + P+ + Y L + + +G
Sbjct: 558 FREMHMKNLVPDIVTYTILFNAVFKSGS 585
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + F +LI C G + AR++ + + + P + A++
Sbjct: 246 MIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNR---GYEPNIVTCTALMGGYCL 302
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + + G+ D+ TYN+ + ++G++ R+ DEM R G P+ T
Sbjct: 303 KGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVT 362
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L K + A ++ M G P ++ L+DGL ++ LD F+++
Sbjct: 363 YNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLV 422
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDV YT++I + + +A +L M K +P++ TY+ +I G C +G+
Sbjct: 423 ESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRIS 482
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EM +G P+ + Y+ L+ L L EA + M+++G
Sbjct: 483 NAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 530
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 111/207 (53%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
+++ Y+IV+ R G +D+ +EM +G P+ TY L+ L K L L+
Sbjct: 184 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ M G D SV FT L+DGL + G L + FDEM N+G P++V T ++ Y
Sbjct: 244 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLK 303
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G ++ A++LFD + G +V+TYN I G+C G+ +A + EM G PN + Y
Sbjct: 304 GNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTY 363
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N+L+ L AG+++ A E+++ M G
Sbjct: 364 NSLIDCLCKAGEVSGAWEIVKTMHRSG 390
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y +M G P+ TY ++ +GK + L+DEM R G + + +L+ L K
Sbjct: 208 YNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCK 267
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A + + M G++P+++ T LM G GN+D + FD + G DV
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWT 327
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y V I Y G + A +FD M +G +PN+ TYNS+I C AG+ A ++K M
Sbjct: 328 YNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMH 387
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + L+ L + +L +A + +VE G
Sbjct: 388 RSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESG 425
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 67 VYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ ++ GY D + N V+ C + K +FH DE+ +GFS + +Y IL++
Sbjct: 94 IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFH---DEIVNNGFSLNEVSYGILIN 150
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + + A+NLL +++ DG GN
Sbjct: 151 GLCENGRVNEAVNLLRMIEKE--------KEKEKDGFFVKGN------------------ 184
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
VV Y+++I G +++ + ++ M+ G PN FTY S+IRG C GKF E ++
Sbjct: 185 -VVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM RG + + V+ L+ L G L EA E+ MV +G ++V+
Sbjct: 244 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVT 292
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E+G ++ ILI CT +G A ++ L N P +Y+ ++ L
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDM---HLKNLVPHIVTYSCLIDGLCR 477
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M +G PD +TY+I++ A ++ LD+ L ++M + G PD
Sbjct: 478 SGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMC 537
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
Y I++ K ++ A+NL M P ++ +T L + + ++G+
Sbjct: 538 YTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 69/152 (45%), Gaps = 8/152 (5%)
Query: 17 ICTCGEVGLARKVV-ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
+C G + A +++ E +K L P +Y+ +L AL + +++ QM G
Sbjct: 475 LCRSGRISNAWRLLNEMHVKGPL----PDTITYSILLDALWKKQHLDEAVFLFNQMIKRG 530
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
PD++ Y I++ + ++D+ L EM PD TY IL + + K
Sbjct: 531 LEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEW 590
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+N ++++ P VL + + L ++ +LD
Sbjct: 591 KFVNVIRDINPPPRVLKY---LAALCKSEHLD 619
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 138/281 (49%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI C E G + + + + + +P +YN ++ + + ++ ++M
Sbjct: 339 TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM 398
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G PDI+TYN ++ ++GK+D+ RL+DEMGR G D T N +L L + K
Sbjct: 399 EESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKL 458
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +LL + G+ + + TL+ G + +DEM K +P ++ Y M
Sbjct: 459 DEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSM 518
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I G+ +A D D ++ G +P+ TYN++I G+C G+ ++A +M +
Sbjct: 519 IAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNF 578
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + NTL+ L G L +A ++ + KGK + VS
Sbjct: 579 KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVS 619
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 142/294 (48%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I+ G +FNILI C G A +V+ K + + P +YN IL L
Sbjct: 189 IKIGVKINTNSFNILIHGSCMENRFGEAIRVLG---KMRDYGCPPDNITYNTILDGLCKK 245
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + M ++G P+ T+NI++ RLG L + +++ M ++ PD TY
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTY 305
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+++ K + A+ L M+ + P V+ + TL++G G+ + +EM
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG 365
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G P+ V Y VM+ ++ G++++ M G LP++ TYN++I C GK DE
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDE 425
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A +M EM +G + + NT++ L KL EAH+++ +G ++ VS
Sbjct: 426 AFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVS 479
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 141/319 (44%), Gaps = 46/319 (14%)
Query: 6 FPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP TFNIL+ C +G A V+E ++ + P +YN ++ +Q +
Sbjct: 264 FPNRT-TFNILVVGCCRLGWLKEAANVIELMSQNSVV---PDAWTYNVMISGF--CKQGR 317
Query: 63 LIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + ++M + +PD++TYN ++ + G ++ +L++EM G P+ TYN+
Sbjct: 318 IAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNV 377
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K K + M+E G P ++ + TL+ + G +D DEM KG
Sbjct: 378 MVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKG 437
Query: 181 C-MPDV----------------------------------VCYTVMITSYIAAGELEKAQ 205
M DV V Y +I Y + +A
Sbjct: 438 LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQAL 497
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L+D M K +P++ TYNSMI G C GK ++A + E+ G P+ + YNT++
Sbjct: 498 RLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGY 557
Query: 266 RNAGKLAEAHEVIRHMVEK 284
G++ +A + MVEK
Sbjct: 558 CQEGQVEKAFQFHNKMVEK 576
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 129/287 (44%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P T+N ++ C G + AR ++ LF P + ++N ++
Sbjct: 223 MRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLF---PNRTTFNILVVGCCR 279
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K V + MS PD TYN+++ + G++ + RL +EM SPD T
Sbjct: 280 LGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVT 339
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ + L+ M+ G P+ + + ++ + G +D +M
Sbjct: 340 YNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKME 399
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC+PD+V Y +I+ + G++++A L D M KG + T N+M+R C K D
Sbjct: 400 ESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLD 459
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA ++ RG + + Y TL+ K ++A + M EK
Sbjct: 460 EAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK 506
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M ++ P I+TYN ++ ++GK +Q LDE+ SG PD TYN ++H
Sbjct: 499 LWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYC 558
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A N M E F P V+ TL+ GL + G L+ F+ +KG D V
Sbjct: 559 QEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAV 618
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I S +A DL + M K P+ +TYN+++ G AG+ +A + ++
Sbjct: 619 SYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKI 678
Query: 247 ESRGCNPN 254
+G + N
Sbjct: 679 AEKGKSEN 686
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 12/227 (5%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N +I ++G + +++ + P + +YN I+H Q + + +M
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKM 573
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++ + PD++T N ++C + G L++ +L + G D +YN ++ L K +
Sbjct: 574 VEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRF 633
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +LL M+E P + ++ GL+ AG + + F ++A KG
Sbjct: 634 GEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG----------- 682
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
S EL K QD I + PN Y++ I C G++ +
Sbjct: 683 -KSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINELCSQGRYKD 728
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR---AGNLDACKYFFDEMANKGCMPDVV 186
+P A + N MK +G P++L TL++ L R + ++ K F + G +
Sbjct: 139 RPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTN 198
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ ++I +A + M G P+ TYN+++ G C G+ +EA ++ +M
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++G PN +N LV G L EA VI M +
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQ 295
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 94/227 (41%), Gaps = 18/227 (7%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLL 103
+YN+++ L + + ++ + G PD +TYN ++ C + ++ K QFH
Sbjct: 514 TYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH--- 570
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
++M F PD T N LL L K AL L N G D + + T++ L +
Sbjct: 571 NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKE 630
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
+EM K PD Y ++ AG ++ A++ + KG+ N
Sbjct: 631 KRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN---- 686
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
F GK +A T E +PN + Y+ ++ L + G+
Sbjct: 687 -----QFLELGKRQDARTSEIPQEP---HPNAIAYSNKINELCSQGR 725
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ENG T+N LI C G++G A ++++ + SK + + N ILH L
Sbjct: 414 MEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDE-MTSKGLKIDTW--TLNTILHCLCV 470
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + S GY D ++Y I++ ++ K D+ L DEM P T
Sbjct: 471 EKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTIT 530
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ L + K A++ LN M E G P + ++ G GN++ F +EM
Sbjct: 531 YNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDV +++ G LEKA LF+ +++KG+ +V TYN++I C GKF+
Sbjct: 591 ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFE 650
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EME++ P+ Y +++ L +AG++ EA E MVE G
Sbjct: 651 NAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG 698
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 141/294 (47%), Gaps = 6/294 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I+ G +FNILI C +V A V + + F P SYN IL ALL
Sbjct: 205 IKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSE---FGCVPDTVSYNTILDALLKR 261
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R + + M +G +P+ TYN+++C RLG L + ++++ M R+ P TY
Sbjct: 262 RLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTY 321
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+L++ K A + + M+++ P V+ + TL+DG S+ + +EM
Sbjct: 322 NMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDK 381
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG + V Y +++ G + +A D M G P+ TYN++I +C AGK +
Sbjct: 382 KGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGK 441
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A MM EM S+G + NT++ L KL EA+ ++ ++G + VS
Sbjct: 442 AFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVS 495
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 118/247 (47%), Gaps = 3/247 (1%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF-- 99
P K + + A + + Q L ++ +M Y P++LT N +M + R
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILL 196
Query: 100 -HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
++L + + G P+ +++NIL++ K AL+ +N M E G P + + T++D
Sbjct: 197 ARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILD 256
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L + L + +M +KG P+ Y +++ Y G L++A + + M LP
Sbjct: 257 ALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLP 316
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
V+TYN ++ GFC GK DEA + EME P+ + YNTL+ +E + +I
Sbjct: 317 TVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLI 376
Query: 279 RHMVEKG 285
M +KG
Sbjct: 377 EEMDKKG 383
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N T T+N+L+ C G++ A ++ + K N P +YN ++
Sbjct: 309 MTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEK---MNVLPDVVTYNTLIDGCSQ 365
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + + ++M +G + +TYNI++ + G + + LD+M +G SPD T
Sbjct: 366 WRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVT 425
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K K A +++ M G T++ L LD +
Sbjct: 426 YNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSAS 485
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + D V Y ++I Y + ++A +L+D M + +P+ TYNS+I G C + K D
Sbjct: 486 KRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVD 545
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+A + EM G P+ YN ++ G + +A + M+E
Sbjct: 546 QAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIE 591
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 127/281 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI C + + +V + + +YN IL + +M
Sbjct: 355 TYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM 414
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G +PD +TYN ++ A + GK+ + R++DEM G D T N +LH L K
Sbjct: 415 EENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKL 474
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A NLL + G+ + + L+ G + D +DEM + MP + Y +
Sbjct: 475 DEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSV 534
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + ++++A D + M+ G +P+ TYN +I GFC+ G ++A EM
Sbjct: 535 IGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLF 594
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ N L+ L G L +A ++ +V KGK I +V+
Sbjct: 595 KPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVT 635
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 106/263 (40%), Gaps = 19/263 (7%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P+T T+N +I C +V A + +++ L P + +YN I+H +
Sbjct: 525 MPSTI-TYNSVIGGLCQSRKVDQAIDKLNEMLENGLV---PDETTYNIIIHGFCLEGNVE 580
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ +M + + PD+ T NI++ R G L++ +L + + G D TYN ++
Sbjct: 581 KAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTII 640
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K K A +LL M+ P + ++ L+ AG + + F +M G +
Sbjct: 641 SSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIV 700
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
D +L K Q++ +++ Y+ I C K+ +A +
Sbjct: 701 HD------------QNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHL 748
Query: 243 MKEMESRGCNPNFLVYNTLVSNL 265
E+ G N Y L+ L
Sbjct: 749 FVEVTKEGVALNKYTYLNLMEGL 771
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 126/246 (51%), Gaps = 2/246 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+P +YN ++H L Q + V M G APD++TYNI++ A + Q
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 101 RLLDEMGRSGFSPDFHTYNILLH-VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L+D M G +P+ TYN+L+ + G+GD AL LL ++ G PS +++ T++ G
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVD-DALELLRNLPSHGCKPSTVNYNTVLKG 121
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L A EM + C P+ + V+I S G L++A L + M G N
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ TYN++I G C D A ++ +M+S GC P+ + YNTL+ L +A + +A E++
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241
Query: 280 HMVEKG 285
+M + G
Sbjct: 242 NMTQNG 247
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 3/281 (1%)
Query: 12 TFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
T+N+L+ CGE G +E +P +YN +L L ++ + + +
Sbjct: 79 TYNVLMDGMCGE-GDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTE 137
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M E P+ T+N+V+ + R G L Q +LL++M + G + + TYN +++ L +
Sbjct: 138 MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN 197
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+ LL+ MK G P ++ + TL+ GL A + D M GC+PD V +
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I G + A ++F M KG PN TY+++I G A K D+A + EM +G
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
NP+ +Y L L + + EA + +R + + G H V
Sbjct: 318 FNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 357
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 1/293 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN++I + GL ++ ++ K +YNAI++ L R
Sbjct: 138 MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN 197
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M G PDI+TYN ++ + L+D M ++G PD T+N
Sbjct: 198 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNT 257
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A+ + M + G P+ + ++T++ GL++A LD F+EM +KG
Sbjct: 258 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 317
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + Y ++ +E+A + G P+ YN+++ G C GK + A
Sbjct: 318 FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 376
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
+M M S GC P+ L Y L+ L G L EA E++ + + ++ + K
Sbjct: 377 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIK 429
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 123/276 (44%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A T+N LI T E G R + P +YN +L A R Y+ +
Sbjct: 7 AYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID 66
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M EG P+ +TYN++M G +D LL + G P YN +L L +
Sbjct: 67 LMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAE 126
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A L+ M P+ F ++ L R G L ++M+ GC ++V Y
Sbjct: 127 RWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYN 186
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I ++ A L M + G P++ TYN++++G C A ++ +A +M M
Sbjct: 187 AIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQN 246
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + +NTL+ L G + +A EV + M +KG
Sbjct: 247 GCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 282
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 92/182 (50%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
P+ +TYN L+H L + + AL++L+ M G P V+ + L++ +
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
D M +GC P+ V Y V++ G+++ A +L + + G P+ YN++++G
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
C A ++ +A ++ EM C PN +N ++ +L G L +A +++ M + G ++
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182
Query: 291 VS 292
V+
Sbjct: 183 VT 184
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 120/238 (50%), Gaps = 6/238 (2%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++M G+ P ++T N ++ +L D+ + +EM R G +P+ +T+NIL HVL K
Sbjct: 211 FRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCK 270
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
L M+E GFDP ++ + TL++ R G LD Y + M +G +PD+V
Sbjct: 271 DGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVS 330
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT ++ G + +A LF M+ +G P++ TYN++I G+C GK E+ +++ +M
Sbjct: 331 YTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMI 390
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKRYKR 299
G +P+ LV GK A ++ + + + Y +L+ R R
Sbjct: 391 WNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENR 448
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F++L+ +G R+ + F + F P + N +L+ LL + VY++M
Sbjct: 190 VFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEEM 249
Query: 72 SDEGYAPDILTYNI---VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
G AP++ T+NI V+C GK+++F L++M GF PD TYN L++ +
Sbjct: 250 ERFGIAPNLYTFNILTHVLCKDGDTGKVNKF---LEKMEEEGFDPDIVTYNTLINSYCRK 306
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L M G P ++ +T LM+GL + G + F M ++G PD+V Y
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTY 366
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I Y G++++++ L MI G P+ FT ++ G+ GKF A ++ E++
Sbjct: 367 NTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQR 426
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + +Y+ L+ L + A ++ M + G
Sbjct: 427 FGVSISQDIYSYLIVALCRENRPFAAKNLLERMSKDG 463
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 125/272 (45%), Gaps = 20/272 (7%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQY--------KLIEWVYQQMSDEGYAP------ 78
++K+ L RP +Y ++H L R + +L+E V + E
Sbjct: 123 WVKNDL-GLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNLILCT 181
Query: 79 -----DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
D + +++++ A R+G++ + R M R GF P T N LL+ L K +
Sbjct: 182 EDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDR 241
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
+ M+ G P++ F L L + G+ F ++M +G PD+V Y +I
Sbjct: 242 CWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLIN 301
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
SY G L+ A L+ M +G +P++ +Y +++ G C G+ EA + M RG +P
Sbjct: 302 SYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSP 361
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YNTL+ GK+ E+ ++ M+ G
Sbjct: 362 DIVTYNTLIHGYCKEGKMQESRSLLHDMIWNG 393
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 119/284 (41%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TFNIL +C G+ G K +E+ + F P +YN ++++ +
Sbjct: 253 GIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEE---GFDPDIVTYNTLINSYCRKGRL 309
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++Y+ M G PD+++Y +M + G++ + H+L M G SPD TYN L
Sbjct: 310 DDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTL 369
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H K K + +LL+ M G P L++G + G + E+ G
Sbjct: 370 IHGYCKEGKMQESRSLLHDMIWNGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGV 429
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
Y+ +I + A++L + M G P + YN +I+ FC EA
Sbjct: 430 SISQDIYSYLIVALCRENRPFAAKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALL 489
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM + PN Y ++ L + E ++ MV G
Sbjct: 490 LKMEMVDKEIKPNLATYRAVIGCLSRLSRSMEGESLVGEMVASG 533
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 123/264 (46%), Gaps = 6/264 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR---PFKNSYNAILHALLG 57
M E GF T+N LI + G ++ + F K+ R P SY A+++ L
Sbjct: 284 MEEEGFDPDIVTYNTLINSYCRKG---RLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCK 340
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M G +PDI+TYN ++ + GK+ + LL +M +G SPD T
Sbjct: 341 EGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFT 400
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+L+ GK K L+ALNL+ ++ G S ++ L+ L R A K + M+
Sbjct: 401 CWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFAAKNLLERMS 460
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P++ Y +I S+ + +A L M+ K PN+ TY ++I +
Sbjct: 461 KDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIGCLSRLSRSM 520
Query: 238 EACTMMKEMESRGCNPNFLVYNTL 261
E +++ EM + G P+ + L
Sbjct: 521 EGESLVGEMVASGMLPDLEICRAL 544
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 23/204 (11%)
Query: 110 GFSPDFHTYNILLHVLG-------------------KGDKPLAAL--NLLNHMKEVGFDP 148
G P Y I++H L K D P + NL+ ++ +DP
Sbjct: 129 GLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPSEDVFKNLILCTEDCNWDP 188
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
V F L+ R G + F M G +P V+ ++ + ++ +++
Sbjct: 189 VV--FDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVY 246
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M G PN++T+N + C G + +++ME G +P+ + YNTL+++
Sbjct: 247 EEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRK 306
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
G+L +A + + M +G LVS
Sbjct: 307 GRLDDAFYLYKIMYRRGVVPDLVS 330
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 120/237 (50%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L+ L+ +++L+ +Y++M G +P ++T+ ++ R G L + + DEM
Sbjct: 151 NVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRV 210
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G P Y IL+ L +K A ++ M+EVG P+V + TLMDG + N
Sbjct: 211 KGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQ 270
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ +M +G +PDVV + ++I GE++ A++LF MI PN+ YNS+I
Sbjct: 271 ALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLID 330
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+C G EA + E+E +P+ Y+ L+ L + + EA + M ++G
Sbjct: 331 AYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEG 387
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 131/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI NG + TF LI C G + E F + ++ P Y ++ L +
Sbjct: 173 MISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNK 232
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E +++ M + G P++ TYN +M +L Q RL +M G PD T+ I
Sbjct: 233 IEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGI 292
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + AA NL +M + P++ + +L+D + G++ F E+
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFE 352
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV Y+++I + E+A ++F+ M +G L N TYNS+I G C GK D+A
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M G PN + ++TL+ L A + MV K
Sbjct: 413 EICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKS 457
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 132/316 (41%), Gaps = 54/316 (17%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TF ILI C GE+ AR + IK F+ P YN+++ A
Sbjct: 278 MLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIK---FSVTPNIAVYNSLIDAYCK 334
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ ++ +PD+ TY+I++ + + ++ + ++M + G + T
Sbjct: 335 VGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVT 394
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K K AL + + M E G +P+V+ F+TL+DG + NL A + EM
Sbjct: 395 YNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMV 454
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT--------------- 222
K PDVV YT MI + G +++A L+ M+ G PN +T
Sbjct: 455 IKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKIS 514
Query: 223 ---------------------------------YNSMIRGFCMAGKFDEACTMMKEMESR 249
Y ++I G C G+F +A + +M
Sbjct: 515 DALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRY 574
Query: 250 GCNPNFLVYNTLVSNL 265
G P+ ++Y ++ L
Sbjct: 575 GLQPDEVIYVVMLRGL 590
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 127/275 (46%), Gaps = 35/275 (12%)
Query: 37 KLFNFRPFKNS--YNAILHALLGIR---------------------QYKLIEWVYQQMS- 72
+ FN P KN Y+AI+H L+G + Y + + ++S
Sbjct: 48 EFFNAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSR 107
Query: 73 --DEGYAPDILTYNIVMCAKYRLGK--LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ P++ I++ K L + L +H++ G + N+LL+VL K
Sbjct: 108 LKSSKFTPNVYGELIIVLCKMELVEEALSMYHKV-------GAALTIQACNVLLYVLVKT 160
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + M G PSV+ F TL+DG R G+L + FDEM KG +P V+ Y
Sbjct: 161 GRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVY 220
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I + ++E+A+ + M G PNV+TYN+++ G+C +A + ++M
Sbjct: 221 TILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLG 280
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
G P+ + + L+ L G++ A + +M++
Sbjct: 281 EGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIK 315
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N L+ C A ++ + + L P ++ ++ L
Sbjct: 243 MREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLV---PDVVTFGILIDGLCK 299
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K ++ M P+I YN ++ A ++G + + L E+ R SPD T
Sbjct: 300 FGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFT 359
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL+ L + A N+ M + G + + + +L+DG + G +D +M
Sbjct: 360 YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V+ ++ +I Y L+ A ++ M+ K P+V TY +MI G C G
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
EA + +M G PN + L+ L GK+++A E+ +E
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIE 525
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 81/186 (43%), Gaps = 9/186 (4%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNL----LNHMKEVGFDPSVLHFTTLMDGLS 161
+G S + N L+ L K KP A L L+ +K F P+V + L+ L
Sbjct: 69 VGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKSSKFTPNV--YGELIIVLC 126
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ ++ + ++ G + V++ + G E +++ MI+ G P+V
Sbjct: 127 KMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVI 183
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+ ++I G C G A M EM +G P +VY L+ L + K+ EA + R M
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243
Query: 282 VEKGKY 287
E G Y
Sbjct: 244 REVGVY 249
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 135/268 (50%), Gaps = 2/268 (0%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G + A + +E S F P K ++N +++ L K V M EG+
Sbjct: 276 CKEGRIEEALRFIEEM--SLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFD 333
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PDI TYN ++ +LG++D+ ++L++M SP+ TYN ++ L K ++ A L
Sbjct: 334 PDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKL 393
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ G P V + +L+ GL + N + EM KGC PD Y ++I S
Sbjct: 394 ALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCF 453
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G+L++A +L M G NV TYN++I GFC + EA + +ME +G + N +
Sbjct: 454 RGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVT 513
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL+ L + ++ EA +++ M+ +G
Sbjct: 514 YNTLIDGLCKSERVEEASQLMDQMIMEG 541
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 142/291 (48%), Gaps = 10/291 (3%)
Query: 1 MIENGFPTTARTFNILICT-CGEVGLARKVVERFIKSKLF----NFRPFKNSYNAILHAL 55
MIE T+N +I T C E VE K L P +YN+++ L
Sbjct: 362 MIERDCSPNTVTYNTIISTLCKE-----NQVEEATKLALVLTGKGILPDVCTYNSLIQGL 416
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R + + +Y++M +G PD TYN+++ + GKL + LL EM SG + +
Sbjct: 417 CLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNV 476
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + A + + M+ G + + + TL+DGL ++ ++ D+
Sbjct: 477 ITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQ 536
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +G PD Y ++T + AG+++KA D+ M + G P++ TY ++I G C AG+
Sbjct: 537 MIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGR 596
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ A +++ ++ +G N YN ++ L + EA + R M+EK +
Sbjct: 597 VEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAE 647
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 129/284 (45%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+ GF TFN+L+ + G + +E F P +YN+++ L + +
Sbjct: 293 LREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEV 352
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V QM + +P+ +TYN ++ + ++++ +L + G PD TYN L
Sbjct: 353 DEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSL 412
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L A+ L MK G P + L+D L G L EM GC
Sbjct: 413 IQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGC 472
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+V+ Y +I + + +A+++FD M +G N TYN++I G C + + +EA
Sbjct: 473 ARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQ 532
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M +M G P+ YN+L++ AG + +A ++++ M G
Sbjct: 533 LMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDG 576
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 139/274 (50%), Gaps = 4/274 (1%)
Query: 15 ILICTCGEVGLARKVVERFIKSKLFNFRPFKNS--YNAILHALLGIRQYKLIEWVYQQMS 72
+ I + GL ++++ F+ + F N+ YN +L+ L+ + KL+E + M
Sbjct: 129 VFIESYASFGLYNEILQ-FVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMV 187
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
G PD+ T+NI++ A R ++ L++EM G PD T+ ++ +
Sbjct: 188 SRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLD 247
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA-NKGCMPDVVCYTVM 191
A+ + M E G + + L++G + G ++ F +EM+ +G PD + ++
Sbjct: 248 GAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNML 307
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ G ++ A ++ D M+ +G P+++TYNS+I G C G+ DEA ++ +M R C
Sbjct: 308 VNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDC 367
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+PN + YNT++S L ++ EA ++ + KG
Sbjct: 368 SPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 112/242 (46%), Gaps = 1/242 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ ++ E ++ QM +G + + +TYN ++ + ++++ +L+D+M
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQM 537
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TYN LL K A +++ M G +P ++ + TL+ GL +AG +
Sbjct: 538 IMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRV 597
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+A + KG Y +I + ++A LF MI K + P+ TY +
Sbjct: 598 EAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIV 657
Query: 227 IRGFCM-AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG C G EA + EM RG P F + L L + + ++I ++EK
Sbjct: 658 FRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKA 717
Query: 286 KY 287
K+
Sbjct: 718 KF 719
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 86/212 (40%), Gaps = 38/212 (17%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
SP+F T LLH L + + A ++L K+ F PS F ++ L +AG DA
Sbjct: 50 LSPNF-TPTQLLHSLRREEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAM 108
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAG---ELEKAQD-------------------- 206
K EM + D V I SY + G E+ + D
Sbjct: 109 KDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLN 168
Query: 207 -LFDG------------MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
L DG M+++G P+V T+N +I+ C A + A +M+EME G P
Sbjct: 169 VLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLP 228
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + T++ G L A V MVE G
Sbjct: 229 DEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAG 260
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 130 bits (327), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 121/220 (55%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +MS G +PD++TY I++ A +LG++D ++M G +P+ +N L++ L
Sbjct: 466 IFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLC 525
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
D+ A L M + G P+V+ F T+M L G + + D M G P+V+
Sbjct: 526 TVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVI 585
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + AG ++A L D M++ G P++ +Y++++RG+C G+ D A + +EM
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREM 645
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+G P + Y+T++ L + + +EA E+ +M++ G+
Sbjct: 646 LRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQ 685
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G T+ ILI ++G V +F + P +N++++ L + +
Sbjct: 470 MSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDR 529
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E ++ +M D+G P+++ +N +MC G++ RL+D M R G P+ +YN
Sbjct: 530 WEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNT 589
Query: 121 LL--HVL-GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ H L G+ D+ A LL+ M VG P ++ + TL+ G + G +D F EM
Sbjct: 590 LIGGHCLAGRTDE---AAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREML 646
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P V Y+ ++ +A++L+ MI GQ +++TYN ++ G C D
Sbjct: 647 RKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVD 706
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + + + S+ PN + + ++ L G+ +A ++ + G ++V+
Sbjct: 707 EAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVT 761
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 146/330 (44%), Gaps = 41/330 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N +I C V A V++ I + +P +YN ++H L
Sbjct: 295 MIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK---DVKPDIQTYNCLIHGYLS 351
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--------CAKYR----------------- 92
++K + ++M G PD++TY++++ C + R
Sbjct: 352 TGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTI 411
Query: 93 ----------LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
G + LLD M +G SP+ + +NI+L K A+++ + M
Sbjct: 412 YGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS 471
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G P V+ + L+D L + G +D F++M N G P+ V + ++ E
Sbjct: 472 QHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWE 531
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
KA++LF M +G PNV +N+++ C G+ A ++ ME G PN + YNTL+
Sbjct: 532 KAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLI 591
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
AG+ EA +++ MV G L+S
Sbjct: 592 GGHCLAGRTDEAAQLLDVMVSVGLKPDLIS 621
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+N +I C V A V++ I + +P +YN I+ L
Sbjct: 260 MIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGV---KPDVVTYNTIIDGLCK 316
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V Q M D+ PDI TYN ++ G+ + R L+EM G PD T
Sbjct: 317 AQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVT 376
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++LL L K K A + M G P+V + L+ G + G + D M
Sbjct: 377 YSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMV 436
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+ + +++ +Y +++A +F M G P+V TY +I C G+ D
Sbjct: 437 ANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVD 496
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +M + G PN +V+N+LV L + +A E+ M ++G
Sbjct: 497 DAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQG 544
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 123/250 (49%), Gaps = 3/250 (1%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG---YAPDILTYNIVMCAKYRLGK 95
F P S N +L L ++ + + M+++G P+++TYN ++ +
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQA 214
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+D+ +L M G D TY+ ++ L K A +L HM + G P V+ + T
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++DGL +A +D + M +KG PDVV Y +I A +++A + MI K
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P++ TYN +I G+ G++ E ++EM +RG +P+ + Y+ L+ L GK EA
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394
Query: 276 EVIRHMVEKG 285
++ M+ KG
Sbjct: 395 KIFYCMIRKG 404
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 115/246 (46%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +YN I+ L + E V Q M D+G D++TY+ ++ + +D+
Sbjct: 194 NCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRA 253
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L M G PD TYN ++ L K A +L HM + G P V+ + T++DG
Sbjct: 254 EGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDG 313
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L +A +D M +K PD+ Y +I Y++ GE ++ + M +G P+
Sbjct: 314 LCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPD 373
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY+ ++ C GK EA + M +G PN +Y L+ G +A+ +++
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433
Query: 280 HMVEKG 285
MV G
Sbjct: 434 LMVANG 439
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 128/284 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNI++C + + + + F + P +Y ++ AL + +
Sbjct: 435 MVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGR 494
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM ++G P+ + +N ++ + + ++ L EM G P+ +N
Sbjct: 495 VDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNT 554
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + + A L++ M+ VG P+V+ + TL+ G AG D D M + G
Sbjct: 555 IMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVG 614
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD++ Y ++ Y G ++ A LF M+ KG P TY+++++G +F EA
Sbjct: 615 LKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAK 674
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M G + YN +++ L + EA ++ + + K
Sbjct: 675 ELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 35/274 (12%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ I+ L + E V Q M D+G PD++TYN ++ + +D+ +L M
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM 295
Query: 107 GRSGFSPDFHTYN-----------------ILLHVLGKGDKP-LAALNLLNH-------M 141
G PD TYN +L H++ K KP + N L H
Sbjct: 296 IDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEW 355
Query: 142 KEV----------GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
KEV G DP V+ ++ L+D L + G + F M KG P+V Y ++
Sbjct: 356 KEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGIL 415
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ Y A G + DL D M+ G PN + +N ++ + DEA + M G
Sbjct: 416 LHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGL 475
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+P+ + Y L+ L G++ +A M+ G
Sbjct: 476 SPDVVTYGILIDALCKLGRVDDAVLKFNQMINDG 509
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 130/279 (46%), Gaps = 10/279 (3%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HAL 55
M + G FN ++C G+V +A+++++ + RP SYN ++ H L
Sbjct: 540 MWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMER---VGVRPNVISYNTLIGGHCL 596
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
G + + M G PD+++Y+ ++ + G++D + L EM R G +P
Sbjct: 597 AG--RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGA 654
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ +L L + A L +M + G + + +++GL + +D F
Sbjct: 655 VTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQS 714
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ +K P+++ +T+MI G + A DLF + + G +PNV TY M++ G
Sbjct: 715 LCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGL 774
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
DE + ME GC P+ ++ N ++ +L G++ A
Sbjct: 775 LDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRA 813
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 112/246 (45%), Gaps = 39/246 (15%)
Query: 78 PDILTYNIVMCAKYRLGKLDQ------------------------------------FHR 101
PD+ TY+I+ RLG+++
Sbjct: 88 PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG---FDPSVLHFTTLMD 158
LL M G P+ + N LL L + AL LL+ M E G P+V+ + T++D
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL +A +D + M +KG DVV Y+ +I A +++A+ + MI KG P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TYN++I G C A D A +++ M +G P+ + YNT++ L A + A V+
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327
Query: 279 RHMVEK 284
+HM++K
Sbjct: 328 QHMIDK 333
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 109/239 (45%), Gaps = 6/239 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++N LI C G A ++++ + L +P SY+ +L + ++
Sbjct: 586 SYNTLIGGHCLAGRTDEAAQLLDVMVSVGL---KPDLISYDTLLRGYCKTGRIDNAYCLF 642
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M +G P +TY+ ++ + + + L M +SG D +TYNI+L+ L K
Sbjct: 643 REMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKT 702
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + + P+++ FT ++D L + G F + + G +P+VV Y
Sbjct: 703 NCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTY 762
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+M+ + I G L++ +LF M G P+ N++IR G+ A + +++
Sbjct: 763 CIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKID 821
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 98/219 (44%), Gaps = 12/219 (5%)
Query: 86 VMCAKYRLGKL--DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG---DKPLAALNLLNH 140
V+ + R G L D +L DE+ +N LL+V+ + A++L N
Sbjct: 18 VIADRARSGSLGIDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNR 77
Query: 141 MKEVGFD---PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
M + P + ++ L R G ++ F + G + V ++
Sbjct: 78 MARACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCD 137
Query: 198 AGELEKAQD-LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG---CNP 253
A +++A D L M G +PNV + N++++G C + +EA ++ M G C P
Sbjct: 138 AKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTP 197
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N + YNT++ L A + A V++HM++KG + +V+
Sbjct: 198 NVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVT 236
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 120/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A L D M KG P+ TY ++I
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + +VY L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVG 382
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+++LI C ++ A ++ + + L P ++ ++
Sbjct: 203 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLV---PNSVTFTTLIDGHCK 259
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD T
Sbjct: 260 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 319
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A M + + +T L+ GL R G + EM
Sbjct: 320 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREML 379
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ G PD YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 145/292 (49%), Gaps = 6/292 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T NI+I C C + A V+ + +K + P ++N ++ L +
Sbjct: 107 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK---LGYEPDTTTFNTLIKGLFLEGK 163
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G PD++TYN ++ R G LL +M D TY+
Sbjct: 164 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYST 223
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + AA++L M+ G SV+ + +L+ GL +AG + +M ++
Sbjct: 224 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 283
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ + V++ ++ G+L++A +L+ MIT+G PN+ TYN+++ G+CM + EA
Sbjct: 284 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 343
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ M C+P+ + + +L+ ++ + +V R++ ++G + V+
Sbjct: 344 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 395
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+ENG T+N + IC G+ LA RK+ ER +K+ +F +Y+ I+
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF-------TYSTIID 226
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L ++++M +G ++TYN ++ + GK + LL +M P
Sbjct: 227 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 286
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+N+LL V K K A L M G P+++ + TLMDG L
Sbjct: 287 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 346
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M C PD+V +T +I Y ++ +F + +G + N TY+ +++GFC +
Sbjct: 347 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 406
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GK A + +EM S G P+ + Y L+ L + GKL +A E+ +
Sbjct: 407 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 135/258 (52%), Gaps = 2/258 (0%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + ++ A+ +Q+ L+ +Q+ G A +I T NI++ R
Sbjct: 68 EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 127
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K + +L ++ + G+ PD T+N L+ L K A+ L++ M E G P V+ +
Sbjct: 128 KTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYN 187
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++++G+ R+G+ +M + DV Y+ +I S G ++ A LF M TK
Sbjct: 188 SIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 247
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +V TYNS++RG C AGK+++ ++K+M SR PN + +N L+ GKL EA
Sbjct: 248 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 307
Query: 275 HEVIRHMVEKGKYIHLVS 292
+E+ + M+ +G ++++
Sbjct: 308 NELYKEMITRGISPNIIT 325
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 119/253 (47%), Gaps = 6/253 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+N L+ C + A +++ +++K P ++ +++
Sbjct: 314 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC---SPDIVTFTSLIKGYCM 370
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ V++ +S G + +TY+I++ + GK+ L EM G PD T
Sbjct: 371 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 430
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K AL + +++ D ++ +TT+++G+ + G ++ F +
Sbjct: 431 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 490
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ YTVMI+ G L +A L M G PN TYN++IR G
Sbjct: 491 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLT 550
Query: 238 EACTMMKEMESRG 250
+ +++EM+S G
Sbjct: 551 ASAKLIEEMKSCG 563
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
A++L MI +G PN TY+S+I GFC + DEA M+ M ++G
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Query: 162 RAGNLDACK----YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
R+G +D K F EM +P +V ++ ++ + D + G
Sbjct: 51 RSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 110
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
N++T N MI FC K A +++ ++ G P+ +NTL+ L GK++EA +
Sbjct: 111 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVL 170
Query: 278 IRHMVEKG 285
+ MVE G
Sbjct: 171 VDRMVENG 178
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 141/274 (51%), Gaps = 9/274 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C G V AR+++ R + F+P SY +L L +++ +E ++
Sbjct: 215 TYNVIINGMCREGRVDDARELLNRLPS---YGFQPDTVSYTTLLKGLCASKRWDDVEELF 271
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M ++ P+ +T+++++ R G +++ ++L++M G + + NI+++ + K
Sbjct: 272 AEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQ 331
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LLN M G +P + +TT++ GL RA D K +EM C P+ V +
Sbjct: 332 GRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTF 391
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I G +E+A L + M G V TYN+++ GFC+ G D A + + M
Sbjct: 392 NTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP- 450
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
C PN + Y TL++ L NA +L A E++ M+
Sbjct: 451 --CKPNTITYTTLLTGLCNAERLDGAAELVAEML 482
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 135/282 (47%), Gaps = 9/282 (3%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G P +N L+ C G + AR+++ + P +Y ++ L +
Sbjct: 105 SGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA------PDAYTYTPLIRVLCDRGR 158
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M G P+++TY +++ A R +Q +LDEM G +P+ TYN+
Sbjct: 159 VADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNV 218
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ + + + A LLN + GF P + +TTL+ GL + D + F EM K
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
CMP+ V + ++I + G +E+A + + M G N N +I C G+ D+A
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++ +M S GCNP+ + Y T++ L A + +A E++ MV
Sbjct: 339 KLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMV 380
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + G D+ YN ++ R G LD RL+ M +PD +TY L+ VL
Sbjct: 98 VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSM---PVAPDAYTYTPLIRVLC 154
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL+LL+ M G P+V+ +T L++ + R + DEM KGC P++V
Sbjct: 155 DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIV 214
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+I G ++ A++L + + + G P+ +Y ++++G C + ++D+ + EM
Sbjct: 215 TYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEM 274
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C PN + ++ L+ G + A +V+ M E G
Sbjct: 275 MEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHG 313
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 121/239 (50%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ G +Y ++ + + APD TY ++ G++ LLD+M
Sbjct: 113 AYNTLVA---GYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDM 169
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G P+ TY +LL + + A+ +L+ M+ G P+++ + +++G+ R G +
Sbjct: 170 LRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRV 229
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + + + + G PD V YT ++ A+ + ++LF M+ K +PN T++ +
Sbjct: 230 DDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
IR FC G + A ++++M GC N + N +++++ G++ +A +++ M G
Sbjct: 290 IRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 3/285 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ N P TFN IC + GL + + + +YNA+++ G
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVN---GFCV 435
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
I+ + P+ +TY ++ +LD L+ EM R P+ T+N+
Sbjct: 436 QGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A+ L+ M E G P+++ + TL+DG+++ + + + +KG
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ ++ +I +E+A LF + G P YN ++ G C + D A
Sbjct: 556 VSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAI 615
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC PN Y L+ L + G L EA +++ + +G
Sbjct: 616 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRG 660
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 1/154 (0%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
IE V +QM + G P+++TYN ++ + + LL + G SPD T++ ++
Sbjct: 510 IELV-EQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIG 568
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+L K D+ A+ L + ++++G P + + ++ GL + +D FF M + GCMP
Sbjct: 569 ILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMP 628
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ Y ++I G L++AQDL + ++G L
Sbjct: 629 NESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 6/146 (4%)
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
+P+ H L+ AG A + + G PDV T +I + G A
Sbjct: 41 NPASAHLRRLIAREDLAG---AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAAR 97
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+ G +VF YN+++ G+C G D A ++ M P+ Y L+ L
Sbjct: 98 VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLC 154
Query: 267 NAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G++A+A ++ M+ +G ++V+
Sbjct: 155 DRGRVADALSLLDDMLRRGCQPNVVT 180
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 137/291 (47%), Gaps = 10/291 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKS--KLFNFRPFKNSYNAILHAL 55
+ E G T+N LI C G V A +++ + K+ F + N +L+ L
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTF-----TLNTVLYNL 464
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++Y+ E + G+ PD ++Y VM A ++ + RL D+M P
Sbjct: 465 CKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSI 524
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ L + ++ A++ LN E G P + ++ + G+L+ F ++
Sbjct: 525 STYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNK 584
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M PDVV ++ G+L+KA LF+ + KG+ +V TYN++I+ C G
Sbjct: 585 MVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGD 644
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
D A +ME +G P+ YN ++S L AG+ EAH ++ + + GK
Sbjct: 645 VDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 144/294 (48%), Gaps = 8/294 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A T+N L+ C G +G AR ++ R K P + +YN ++ A +
Sbjct: 238 GLSPDAVTYNTLLNAHCRKGMLGEARALLARM---KRDGIAPTQPTYNTLVSAFARLGWI 294
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS-PDFHTYNI 120
K V + M+ G+ PD+ TYN++ + GK+D+ RL DEM R G + PD TYN
Sbjct: 295 KQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNT 354
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K AL LL M++ G P+++ ++ L + G L+ +++A +G
Sbjct: 355 LVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEG 414
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y +I +Y AG + KA L D M+ KG + FT N+++ C ++++A
Sbjct: 415 LAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAE 474
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
++ RG P+ + Y T+++ A + M+E+ K I +S +
Sbjct: 475 ELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIER-KLIPSISTY 527
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 132/275 (48%), Gaps = 1/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN+L+ T G + + F P +YN +L+A + +M
Sbjct: 210 TFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARM 269
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G AP TYN ++ A RLG + Q ++++ M GF PD TYN+L L + K
Sbjct: 270 KRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKV 329
Query: 132 LAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L + M+ +G P V+ + TL+D + +EM +KG P +V + +
Sbjct: 330 DEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNI 389
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ S G+LE+A + + +G P+V TYN++I +C AG +A T+M EM +G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ NT++ NL + +A E++ ++G
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 137/324 (42%), Gaps = 46/324 (14%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T T+N L+ +G ++ + + F P +YN + +G+ Q
Sbjct: 269 MKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLA---MGLCQ 325
Query: 61 YKLIEWVYQ---QMSDEGYA-PDILTYNIVM--CAKYRLGKLDQFHRLLDEMGRSGFSPD 114
++ ++ +M G A PD++TYN ++ C K+R D RLL+EM G P
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSS-DAL-RLLEEMRDKGVKPT 383
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+NI++ L K K AL L + E G P V+ + TL+D +AGN+ D
Sbjct: 384 LVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMD 443
Query: 175 EMANKGC-----------------------------------MPDVVCYTVMITSYIAAG 199
EM KG +PD V Y ++ +Y
Sbjct: 444 EMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEY 503
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
E A L+D MI + +P++ TYN++I+G C + EA + E +G P+ YN
Sbjct: 504 NPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYN 563
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVE 283
++ G L A MVE
Sbjct: 564 IIIHAYCKEGDLENAFRFHNKMVE 587
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 10/234 (4%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G +PD +TYN ++ A R G L + LL M R G +P TYN L+ + A
Sbjct: 238 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQA 297
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMIT 193
++ M GF+P + + L GL +AG +D DEM G +PDVV Y ++
Sbjct: 298 TKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVD 357
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ A L + M KG P + T+N +++ C GK +EA ++++ G P
Sbjct: 358 ACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAP 417
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG---------KYIHLVSKFKRYK 298
+ + YNTL+ AG +A+A ++ MV KG ++ + K KRY+
Sbjct: 418 DVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYE 471
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 17/285 (5%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A ++ ++ I+ KL P ++YN ++ L + + K + ++G PD TYNI
Sbjct: 508 ALRLWDQMIERKLI---PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNI 564
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL---GKGDKPLAALNLLNHMK 142
++ A + G L+ R ++M + F PD T N L++ L GK DK AL L
Sbjct: 565 IIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK---ALKLFESWV 621
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G V+ + TL+ + + G++D +FFD+M KG PD Y V++++ AG E
Sbjct: 622 EKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSE 681
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL-VYNTL 261
+A ++ + G+L F + E + S N L Y
Sbjct: 682 EAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMER 741
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF-KRYKR 299
++ L G+L EA V+ M++KG YI L+ KR KR
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKR 786
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 100/225 (44%), Gaps = 11/225 (4%)
Query: 75 GYAPDILTYNIVMCAKYR------LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
G P + N V+ A R LD F L++ P+ +T+N+L+H
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELR----LHPNHYTFNLLVHTHCSK 221
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL L+ M+ G P + + TL++ R G L + M G P Y
Sbjct: 222 GTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTY 281
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++++ G +++A + + M G P++ TYN + G C AGK DEA + EME
Sbjct: 282 NTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER 341
Query: 249 RGCN-PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G P+ + YNTLV ++A ++ M +KG LV+
Sbjct: 342 LGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVT 386
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 136/268 (50%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G+V A+ V +K F+P +Y++++ +++ + ++ M+ G
Sbjct: 230 CKEGKVKEAKNVFAAMMKK---GFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVN 286
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PDI +YNI++ ++ D L +EM P+ TYN L+ L K K AL L
Sbjct: 287 PDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKL 346
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
++ M + G P ++ +++L+D L + D ++ ++G P++ YT++I
Sbjct: 347 VDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCK 406
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G E AQ++F+ ++ KG NV TY MI FC G F EA M+ +ME GC PN +
Sbjct: 407 GGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVT 466
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y ++ +L + + +A +++ M+ +G
Sbjct: 467 YEIIIRSLFDKDENDKAEKLLLEMITRG 494
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK+ + + M + GF P+ TY+ L+ + A ++ N+M + G +P + +
Sbjct: 233 GKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQSY 292
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L++G + DA F+EM + +P+VV Y +I +G++ A L D M
Sbjct: 293 NILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEMHD 352
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+GQ P++ TY+S++ C D+A ++ +++ +G PN Y L++ L G+ +
Sbjct: 353 RGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGGRPED 412
Query: 274 AHEVIRHMVEKGKYIHL 290
A + ++ KG I++
Sbjct: 413 AQNIFEDLLVKGYNINV 429
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 101/217 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G +++NILI ++ + + F + P +YN+++ L +
Sbjct: 280 MAQGGVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGK 339
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M D G PDI+TY+ ++ A + D+ LL ++ G P+ +TY I
Sbjct: 340 ISYALKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTI 399
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L KG +P A N+ + G++ +V +T ++ G +M G
Sbjct: 400 LINGLCKGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENG 459
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
C+P+ V Y ++I S E +KA+ L MIT+G L
Sbjct: 460 CIPNAVTYEIIIRSLFDKDENDKAEKLLLEMITRGLL 496
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 71/131 (54%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G + K F M KG P+VV Y+ ++ Y E+ KA+ +F+ M G P++
Sbjct: 231 KEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPDIQ 290
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+YN +I GFC D A + +EM R PN + YN+L+ L +GK++ A +++ M
Sbjct: 291 SYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVDEM 350
Query: 282 VEKGKYIHLVS 292
++G+ +++
Sbjct: 351 HDRGQPPDIIT 361
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G+ A +++E S P +YN ++ + ++ E + M G +
Sbjct: 130 CKIGKTRKATRIMEIIEDSGAV---PDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCS 186
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++T+NI++ R G L + +L++M + G +P+ +YN LLH K K A+
Sbjct: 187 PSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEY 246
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G P ++ + TL+ L + G +DA +++++KGC P ++ Y +I
Sbjct: 247 LGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSK 306
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G+ ++A L D M KG P++ TY+S++ G GK DEA ++E G PN +
Sbjct: 307 VGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAIT 366
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN ++ L A K A + + +MV++G
Sbjct: 367 YNAIMLGLCKARKTDRAIDFLAYMVQRG 394
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 137/282 (48%), Gaps = 16/282 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH-----ALLGIRQYKL 63
T+N+LI C+ G A K++ ++ P ++N +++ LLG +
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRR---GCSPSVVTFNILINFLCRKGLLG----RA 208
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I+ V ++M G P+ L+YN ++ + K+++ L +M G PD TYN LL
Sbjct: 209 ID-VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLT 267
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K K AA+ LLN + G P ++ + T++DGLS+ G D DEM KG P
Sbjct: 268 ALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKP 327
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D++ Y+ ++ G++++A F + G PN TYN+++ G C A K D A +
Sbjct: 328 DIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFL 387
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M RGC P Y L+ L G EA E++ + +G
Sbjct: 388 AYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRG 429
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 8/254 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G + TFNILI C G +G A V+E+ K P SYN +LH
Sbjct: 180 MVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPK---HGCTPNSLSYNPLLHGFCK 236
Query: 58 IRQY-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
++ + IE++ +M+ G PDI+TYN ++ A + GK+D LL+++ G SP
Sbjct: 237 EKKMERAIEYL-GKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLI 295
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN ++ L K K A LL+ M+ G P ++ +++L+ GLSR G +D FF ++
Sbjct: 296 TYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDL 355
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P+ + Y ++ A + ++A D M+ +G P +Y +I G G
Sbjct: 356 EVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLA 415
Query: 237 DEACTMMKEMESRG 250
EA ++ E+ RG
Sbjct: 416 KEALELLNELCLRG 429
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 112/217 (51%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G PDI+ ++ ++GK + R+++ + SG PD TYN+L+ +
Sbjct: 108 ESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCST 167
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + A LL M G PSV+ F L++ L R G L ++M GC P+ + Y
Sbjct: 168 GRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSY 227
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + ++E+A + M ++G P++ TYN+++ C GK D A ++ ++ S
Sbjct: 228 NPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSS 287
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC+P + YNT++ L GK +A +++ M KG
Sbjct: 288 KGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
R G+L++ R L+ M G PD L+ K K A ++ +++ G P V+
Sbjct: 96 RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ L+ G+ G + +M +GC P VV + ++I G L +A D+ + M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G PN +YN ++ GFC K + A + +M SRGC P+ + YNTL++ L GK+
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275
Query: 272 AEAHEVIRHMVEKG 285
A E++ + KG
Sbjct: 276 DAAVELLNQLSSKG 289
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%)
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M G P ++ T+L+ G + G + + + G +PDV+ Y V+I+ +
Sbjct: 107 LESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCS 166
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G A+ L M+ +G P+V T+N +I C G A ++++M GC PN L
Sbjct: 167 TGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLS 226
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L+ K+ A E + M +G Y +V+
Sbjct: 227 YNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVT 261
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
LG G L+ ++ L + +E+ + + + L R G L+ F + M +G +PD
Sbjct: 66 LGNGHVSLSPIHSLTNFEEIESNNN-------LSKLVRNGELEEGFRFLESMVYRGDIPD 118
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
++ T +I + G+ KA + + + G +P+V TYN +I G C G++ +A ++
Sbjct: 119 IIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLA 178
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M RGC+P+ + +N L++ L G L A +V+ M + G
Sbjct: 179 DMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG 219
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 126/251 (50%), Gaps = 2/251 (0%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
+++ RP + ++ +L ++ ++ Y + +Y+QM G + T NI++ + L
Sbjct: 43 NRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHL 102
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
+L +L ++ + G+ P T+ L+ L K AL L + M GF P VL +
Sbjct: 103 NRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTY 162
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
TL++GL + GN F M + C P VV Y+ +I S +L +A LF M+
Sbjct: 163 GTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLA 222
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG PN FTY+S+I G C+ G + EA + M R P+ L +NTLV L G + +
Sbjct: 223 KGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVK 282
Query: 274 AHEVIRHMVEK 284
AH V+ M++
Sbjct: 283 AHYVVDVMIQS 293
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 134/286 (46%), Gaps = 6/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++ T+N L+ C E+G V + ++ P SY +++
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV---PSVISYTTLINGYCK 346
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I+ ++++MS +G PD +TYN ++ +G+L L EM G PD T
Sbjct: 347 IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL L K + A+ LL ++ DP + ++ +MDG+ RAG L+A + F +++
Sbjct: 407 YRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLS 466
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PDV YT+MI G L +A LF M G PN TYN + RGF +
Sbjct: 467 SKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETL 526
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + +EM SRG + + LV L + G +++ V+
Sbjct: 527 RAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 131/280 (46%), Gaps = 2/280 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIR 59
M GF T+ LI +VG + RF++S + N RP Y+ I+ +L R
Sbjct: 150 MTGEGFQPDVLTYGTLINGLCKVGNTSTAI-RFLRSMEQRNCRPTVVVYSTIIDSLCKDR 208
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q ++ M +G +P+ TY+ ++ LG + RL M PD T+N
Sbjct: 209 QLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFN 268
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K + A +++ M + P V+ + +LMDG + FD M K
Sbjct: 269 TLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC+P V+ YT +I Y ++KA LF+ M +G +P+ TYN++I G C G+ +A
Sbjct: 329 GCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM G P+ + Y L L +LAEA +++
Sbjct: 389 IALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK 428
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 142/326 (43%), Gaps = 41/326 (12%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T NILI C +G A V+ +K ++P ++ ++ L +
Sbjct: 84 GIPHNTYTLNILINSFCHLNRLGFAFSVLGDILK---LGYQPSTATFTTLIRGLCVEGKI 140
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M+ EG+ PD+LTY ++ ++G R L M + P Y+ +
Sbjct: 141 GEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTI 200
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDP------SVLH----------------------- 152
+ L K + AL+L + M G P S++H
Sbjct: 201 IDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI 260
Query: 153 ------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
F TL+D L + G + Y D M PDVV Y ++ + E+ K +
Sbjct: 261 MPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVN 320
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
+FD M+ KG +P+V +Y ++I G+C D+A + +EM +G P+ + YNTL+ L
Sbjct: 321 VFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLC 380
Query: 267 NAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G+L +A + MV G+ LV+
Sbjct: 381 HVGRLRDAIALFHEMVVYGQIPDLVT 406
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 131/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TFN L+ C G V A VV+ I+S L +P +YN+++
Sbjct: 255 MIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDL---KPDVVTYNSLMDGHCL 311
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V+ M +G P +++Y ++ ++ +D+ L +EM + G PD T
Sbjct: 312 RSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVT 371
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L + A+ L + M G P ++ + L D L + L +
Sbjct: 372 YNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIE 431
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ Y++++ AGELE A+DLF + +KG P+V TY MI G C G
Sbjct: 432 GTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLA 491
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + EM+ GC+PN YN + + A ++ + M+ +G
Sbjct: 492 EASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRG 539
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+ +D L + M R P ++ LL + + L+L M G +
Sbjct: 32 VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
L++ L ++ G P +T +I G++ +A LFD M
Sbjct: 92 LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G P+V TY ++I G C G A ++ ME R C P +VY+T++ +L +L
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211
Query: 273 EAHEVIRHMVEKG 285
EA + M+ KG
Sbjct: 212 EALSLFSDMLAKG 224
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N++I G + + S + + +YN ++ ALL + +E + +M
Sbjct: 282 TYNVVISFLAREGHLENAA-KLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEM 340
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+EG P ++TYN ++ + +++ EM G PD TYN +L+ K
Sbjct: 341 ENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNL 400
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL LL ++ G P+VL + TL+DG R G L+ + +EM +GC PDV YT++
Sbjct: 401 KEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTIL 460
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ L A++ FD M++KG P+ F YN+ I + G +A + + M +G
Sbjct: 461 MNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGI 520
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YN ++ L G L +A ++ MV G
Sbjct: 521 YPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDG 554
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 116/239 (48%), Gaps = 3/239 (1%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L L ++ + VY++M P I+TYN ++ + + G+ D+ LL EM
Sbjct: 212 NCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMET 271
Query: 109 SGFSPDFH--TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G + TYN+++ L + A L++ M+ + S + L+ L G +
Sbjct: 272 QGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYNPLITALLERGFV 330
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ EM N+G MP +V Y +I + + ++E AQ F M G LP++ TYNSM
Sbjct: 331 QKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSM 390
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C AG EA ++ ++ G P L YNTL+ G L EA + MVE+G
Sbjct: 391 LNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG 449
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 120/284 (42%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N LI C G + AR++ E ++ F P +Y +++ +R
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCF---PDVCTYTILMNGSHKVRNL 470
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M +G PD YN +CA+ LG + +L + M G PD TYN++
Sbjct: 471 PMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVI 530
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A +L M G P + +T L+ G L + + M + G
Sbjct: 531 IDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGL 590
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV YT++I + G L A F M+ G PN TYN +I C G+ A
Sbjct: 591 QPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYH 650
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM RG PN Y L+ G A+A + M + G
Sbjct: 651 HFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNG 694
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G +N IC +G K + L P +YN I+ L
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + +M +G PD +TY ++ A G L + +LL+ M G P TY I
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H + +A M +VG +P+ + + L+ L R G + F EM +G
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
P+ YT++I G A L+ M G P+ T+N++ +GF
Sbjct: 660 LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 3/185 (1%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
G +PD N +L VL + + M ++ +P+++ + TL+D + G D
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262
Query: 170 KYFFDEMANKG--CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
EM +G C+ + V Y V+I+ G LE A L D M + + FTYN +I
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKK-ASSFTYNPLI 321
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
G + + EME+ G P + YN ++ L + ++ A M G
Sbjct: 322 TALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLL 381
Query: 288 IHLVS 292
L++
Sbjct: 382 PDLIT 386
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
C F +A G PDV ++ A + + ++ M+ P + TYN+++
Sbjct: 192 CLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLD 251
Query: 229 GFCMAGKFDEACTMMKEMESR--GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
F G+ DEA ++KEME++ GC N + YN ++S L G L A +++ M
Sbjct: 252 SFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM 306
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 125/253 (49%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 134 FNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMR 193
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K A L + M G P+ + FTTL+DG + G +D
Sbjct: 194 ASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 253
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y ++ G+L +A L D M KG P+ FTY ++I
Sbjct: 254 LAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLI 313
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G D A K M + + Y L+S L G+ +A +++R M+
Sbjct: 314 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLK 373
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 374 PDTGTYTMIINEF 386
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 98/183 (53%), Gaps = 2/183 (1%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+E+ G+ + +NIL+H K GD +A L + + + + G PSV+ + TLM+G R
Sbjct: 120 EEILECGYPASLYFFNILMHRFCKDGDIRVAPL-VFDAITKWGLRPSVVSYNTLMNGYIR 178
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G+LD M G PDV Y+V+I ++ A +LFD M+ KG +PN T
Sbjct: 179 LGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVT 238
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ ++I G C G+ D A + K+M S+ P+ + YNTLV L G L +AH +I M
Sbjct: 239 FTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMX 298
Query: 283 EKG 285
KG
Sbjct: 299 XKG 301
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 135/295 (45%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A V + K + RP SYN +++ +
Sbjct: 122 ILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITK---WGLRPSVVSYNTLMNGYIR 178
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + +D + L DEM G P+ T
Sbjct: 179 LGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVT 238
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L+ DEM
Sbjct: 239 FTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMX 298
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 299 XKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSX 358
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 359 DAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVT 413
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 76/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PDJ+TYN ++ + G L+Q H L+DEM G PD TY L+
Sbjct: 258 IYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCC 317
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AA M + + +T L+ GL + G + EM + G PD
Sbjct: 318 KEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTG 377
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P V TYN ++ G
Sbjct: 378 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F++E+ G + + +++ + G++ A +FD + G P+V +YN+++ G+
Sbjct: 118 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYI 177
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L + +A+E+ M+ KG
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKG 231
>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 966
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 127/240 (52%), Gaps = 18/240 (7%)
Query: 63 LIEWVYQQMSDEGYAPD-ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
L E VY++M + I T N C +GK ++ +++ EM R GF PD TY +
Sbjct: 400 LAEKVYEEMLVASCVLNKINTANFARCL-CGVGKFEKAFQIVKEMMRKGFVPDASTYTKV 458
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L + + A L MK+VG +P V +T L+D +AG ++ + +FDEM + GC
Sbjct: 459 ITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGC 518
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV YT ++ +Y+ + +L +A D+F M+ PN TY+++I G C AG+ +AC
Sbjct: 519 SPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACE 578
Query: 242 MMKEM----------------ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ ++ +PN + Y LV+ L A K+++AH+++ M+ G
Sbjct: 579 VYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAG 638
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 136/290 (46%), Gaps = 16/290 (5%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ ILI + + GL + F + + P +Y A+LHA L +Q ++ +M
Sbjct: 489 TYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRM 548
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSG---------------FSPDF 115
+ P+ +TY+ ++ + G++ + + ++ G S SP+
Sbjct: 549 VGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNV 608
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY L++ L K K A +LL+ M G +P+ + + L+DG + G +D+ + F
Sbjct: 609 VTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLR 668
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +P V YT +I G L+ A + M+ PNV TY +M+ G C G+
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGE 728
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++A ++ ME +GC+PN + Y L+ L AGK+ E+ M KG
Sbjct: 729 TEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 134/252 (53%), Gaps = 2/252 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P + Y+A++ + + + V+ +M+ GY P + TY ++ ++ G+LD +
Sbjct: 640 EPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+L +M + +P+ TY ++ L K + ALNLL+ M++ G P+V+ +T L+DGL
Sbjct: 700 VLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLG 759
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+AG +DA F +M KGC P+ V Y ++I AAG L+ A L D M +
Sbjct: 760 KAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQ 819
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y + ++GF + +F + +++EMES P VY L+ + AG+L A E+ + M
Sbjct: 820 GYRTTVQGF--SKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEM 877
Query: 282 VEKGKYIHLVSK 293
+E +++ SK
Sbjct: 878 MEVSSSLNMASK 889
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%)
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L+G ++ ++ + +P+++TY ++ + K+ H LLD M +G P+
Sbjct: 583 LIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPN 642
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
Y+ L+ K + +A + M + G+ PSV +T+L+D + + G LD
Sbjct: 643 QIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M C P+VV YT M+ GE EKA +L M KG PNV TY ++I G AG
Sbjct: 703 QMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAG 762
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
K D + +M+++GC PN++ Y L+++ AG
Sbjct: 763 KVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAG 797
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 15/292 (5%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E+ R N+L+ C GL + +E + K F +RP +YNA++ L Q +
Sbjct: 162 EDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVE 221
Query: 63 LIEWVYQQMSDEGYAPD---ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ V ++MS G+ D + ++ +C + R G LD + R F D
Sbjct: 222 MAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGD------ALDLLEREDFKLDTVLCT 275
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L + A++ L+ M+ + P+V+ + TL+ G + L CK + M +
Sbjct: 276 QMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTE 335
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK---- 235
GC P + ++ +Y A + A LF+ M T G P YN I C +
Sbjct: 336 GCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNP 395
Query: 236 --FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A + +EM C N + L GK +A ++++ M+ KG
Sbjct: 396 ELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKG 447
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 6/259 (2%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
++ P +Y +L L +Q + + M EG P +N ++
Sbjct: 301 SYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYA 360
Query: 100 HRLLDEMGRSGFSPDFHTYNILL-HVLGKGDKP-LAALNLLNHMKEVGFDPSV----LHF 153
++L + M G P + YNI + + G+ + P L+L + E S ++
Sbjct: 361 YKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINT 420
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L G + EM KG +PD YT +IT A ++KA LF M
Sbjct: 421 ANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKK 480
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+V+TY +I FC AG ++A + EM S GC+PN + Y L+ + +L +
Sbjct: 481 VGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQ 540
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A+++ MV Y + ++
Sbjct: 541 ANDIFHRMVGDACYPNAIT 559
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GE+ A++V R K + P ++Y +++ + + L V QM +
Sbjct: 654 CKVGEIDSAQEVFLRMTKC---GYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCN 710
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+++TY ++ + G+ ++ LL M + G SP+ TY L+ LGK K A L L
Sbjct: 711 PNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLEL 770
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC-------------KYF------------ 172
MK G P+ + + L++ AG LD KY
Sbjct: 771 FMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSK 830
Query: 173 --------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT-- 222
+EM + P Y ++I S+ AG LE A +L M+ N+ +
Sbjct: 831 RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD 890
Query: 223 -YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ S+I+ C++ + +EA + EM RG P+ + LV L K EA ++ +
Sbjct: 891 MHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGI 950
Query: 282 VEKG 285
++G
Sbjct: 951 CQEG 954
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 120/291 (41%), Gaps = 42/291 (14%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G+ + T+ LI G + LA KV+ + +K + P +Y A++ L
Sbjct: 669 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD---SCNPNVVTYTAMVDGLCK 725
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M +G +P+++TY ++ + GK+D L +M G +P++ T
Sbjct: 726 TGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVT 785
Query: 118 YNILLH---------------------------------VLGKGDKPLAALNLLNHMKEV 144
Y IL++ V G + LA+L LL M+
Sbjct: 786 YRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESH 845
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC---MPDVVCYTVMITSYIAAGEL 201
P + L+D S+AG L+ EM M +T +I + + ++
Sbjct: 846 DTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQV 905
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
E+A L+ M +G +P++ + +++G K++EA + + G N
Sbjct: 906 EEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVN 956
>gi|357115347|ref|XP_003559450.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Brachypodium distachyon]
Length = 1102
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 124/239 (51%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYNA++ L+ + E ++ +M G PD TYN+++ A + +++ ++ EM
Sbjct: 778 SYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDMLKVQKEM 837
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ + TYN ++ L K A++L + GF P+ + L+DGL + G +
Sbjct: 838 HCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKI 897
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + FDEM + GC P+ Y +++ Y AG EK +LF M+ +G P++ +Y +
Sbjct: 898 EDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVL 957
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C AG+ +++ + +++ G P+ + YN L+ L +G+L EA + M + G
Sbjct: 958 IGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSG 1016
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 8/285 (2%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++N LIC + L F + K P + +YN IL A+ + + +
Sbjct: 771 GVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKSMRIEDM 830
Query: 65 EWVYQQMSDEGYAPDILTYNIVMC----AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V ++M +GY +TYN ++ +K +D +++L+ E GFSP TY
Sbjct: 831 LKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSE----GFSPTPCTYGP 886
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL L K K A +L + M + G P+ + L++G AGN + F M ++G
Sbjct: 887 LLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQG 946
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ YTV+I + AG L + F + G P++ TYN +I G +G+ +EA
Sbjct: 947 INPDIKSYTVLIGALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAV 1006
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +ME G PN YN+L+ L GK AEA ++ +++ G
Sbjct: 1007 SLFNDMEKSGIAPNLYTYNSLILYLGKEGKAAEAGKMYEELLKNG 1051
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 130/270 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ L+ CG+ G +R V+E + K + +Y A++ AL + + V+ QM
Sbjct: 323 TYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFDQM 382
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G P +YN ++ + +L+ L + M G +P+ +TY + ++ GK +
Sbjct: 383 KQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSGES 442
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L A+ MK G P V+ ++ L+++G L K F E+ + G PD + YT+M
Sbjct: 443 LKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIGVCPDNITYTMM 502
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I A ++A +F MI +P+V NS+I AG+ +EA + E++
Sbjct: 503 IKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNL 562
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+P YNTL++ L GK+ E ++ M
Sbjct: 563 DPTDCTYNTLLAGLGREGKVKEVMHLLEEM 592
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G+ +T T+N +I + + + ++ + K F P +Y +L LL + +
Sbjct: 841 GYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTYGPLLDGLLKDGKIEDA 900
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRL-GKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
E ++ +M D G P+ YNI++ YRL G ++ L M G +PD +Y +L+
Sbjct: 901 EDLFDEMLDYGCKPNRAIYNILLNG-YRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIG 959
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L + +L+ + E+G +P ++ + L+ GL R+G L+ F++M G P
Sbjct: 960 ALCTAGRLNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAP 1019
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
++ Y +I G+ +A +++ ++ G PNVFTYN++I G+ ++G D A
Sbjct: 1020 NLYTYNSLILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASY 1079
Query: 244 KEMESRGCNPNFLVYNTLVSNL 265
+M GC PN Y L + L
Sbjct: 1080 GQMIVGGCPPNSSTYMQLPNQL 1101
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 115/240 (47%), Gaps = 2/240 (0%)
Query: 47 SYNAILHALLGIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+YN I+ L+ + Y+ ++ Y+ MS EG++P TY ++ + GK++ L DE
Sbjct: 848 TYNTIISGLVKSKMLYEAMDLYYKLMS-EGFSPTPCTYGPLLDGLLKDGKIEDAEDLFDE 906
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M G P+ YNILL+ L +M + G +P + +T L+ L AG
Sbjct: 907 MLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGR 966
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
L+ +F ++ G PD++ Y ++I +G LE+A LF+ M G PN++TYNS
Sbjct: 967 LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNS 1026
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I GK EA M +E+ G PN YN L+ +G A M+ G
Sbjct: 1027 LILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG 1086
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 137/291 (47%), Gaps = 13/291 (4%)
Query: 1 MIENGFPTTARTFNILICTCGE------VGLARKVVERFIKSKLFNFRPFKNSYNAILHA 54
M +G + RT+++L+ G+ V L R++ + +K ++ SY +
Sbjct: 208 MATDGIVPSVRTYSVLMLAFGKRDVETVVWLLREMEDHGVKPNVY-------SYTICIRV 260
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L +++ + Q+M DEG PD++T +++ G++ + +M S PD
Sbjct: 261 LGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSDAKDVFWKMKASDQKPD 320
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TY LL G + + + N MK G++ +V+ +T ++D L + G +D FD
Sbjct: 321 RVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYTAVVDALCQVGRVDEASDVFD 380
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M KG P Y +I+ ++ A L A +LF+ M G PN +TY I + +G
Sbjct: 381 QMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHMNIHGPTPNGYTYVLFINYYGKSG 440
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +A + M+S+G P+ + N ++ +L +G+L A V + G
Sbjct: 441 ESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHELKSIG 491
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 113/237 (47%), Gaps = 5/237 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD--QFHRLLD 104
+YN +++ L+ + VY+ M+ +G P + TY+++M A GK D LL
Sbjct: 184 TYNGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLA---FGKRDVETVVWLLR 240
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM G P+ ++Y I + VLG+ + A +L M++ G P V+ T L+ L AG
Sbjct: 241 EMEDHGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAG 300
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ K F +M PD V Y ++ G+ ++++ M G NV Y
Sbjct: 301 RVSDAKDVFWKMKASDQKPDRVTYITLLDKCGDNGDSRSVIEIWNAMKADGYNDNVVAYT 360
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+++ C G+ DEA + +M+ +G P YN+L+S A +L A E+ HM
Sbjct: 361 AVVDALCQVGRVDEASDVFDQMKQKGIEPQQYSYNSLISGFLKADRLNHALELFNHM 417
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 7/243 (2%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+ + F N Y +L I++Y+L M +G PD++ N V+ + + G+L
Sbjct: 427 YTYVLFINYYGKSGESLKAIKRYEL-------MKSKGIVPDVVAGNAVLYSLAKSGRLGM 479
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
R+ E+ G PD TY +++ K A+ + + M E P VL +L+D
Sbjct: 480 AKRVFHELKSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLID 539
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L +AG + F E+ P Y ++ G++++ L + M + P
Sbjct: 540 TLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPP 599
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N+ TYN+++ C G+ + A M+ M +GC P+ YNT + L +L EA +
Sbjct: 600 NLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIF 659
Query: 279 RHM 281
M
Sbjct: 660 CQM 662
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ + I G+ G + K ++R+ K P + NA+L++L + + + V+ ++
Sbjct: 428 TYVLFINYYGKSGESLKAIKRYELMKSKGIVPDVVAGNAVLYSLAKSGRLGMAKRVFHEL 487
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PD +TY +++ + D+ ++ EM + PD N L+ L K +
Sbjct: 488 KSIGVCPDNITYTMMIKCCSKASNADEAMKVFSEMIETRCVPDVLAVNSLIDTLYKAGRG 547
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + + +KE+ DP+ + TL+ GL R G + + +EM + P+++ Y +
Sbjct: 548 NEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGKVKEVMHLLEEMNSNSYPPNLITYNTV 607
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ GE+ A + M KG +P++ +YN+ + G + EA + +M+ +
Sbjct: 608 LDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNTALHGLVKEDRLTEAFRIFCQMK-KVL 666
Query: 252 NPNFLVYNTLVSNLRNAGKLAEA-HEVIRHMVEKG 285
P++ T++ + G + EA H + ++++ G
Sbjct: 667 APDYTTLCTILPSFVKNGLMNEALHTLKEYILQPG 701
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +NIL+ G KV E F P SY ++ AL +
Sbjct: 907 MLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVDQGINPDIKSYTVLIGALCTAGR 966
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++Q+++ G PD++TYN+++ R G+L++ L ++M +SG +P+ +TYN
Sbjct: 967 LNDSLSYFRQLTELGLEPDLITYNLLIHGLGRSGRLEEAVSLFNDMEKSGIAPNLYTYNS 1026
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LGK K A + + + G+ P+V + L+ G S +G+ D + +M G
Sbjct: 1027 LILYLGKEGKAAEAGKMYEELLKNGWKPNVFTYNALIGGYSVSGSTDNAFASYGQMIVGG 1086
Query: 181 CMPDVVCY 188
C P+ Y
Sbjct: 1087 CPPNSSTY 1094
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE N LI T + G + + F + K N P +YN +L L +
Sbjct: 522 MIETRCVPDVLAVNSLIDTLYKAGRGNEAWKIFHELKEMNLDPTDCTYNTLLAGLGREGK 581
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + ++M+ Y P+++TYN V+ + G+++ +L M G PD +YN
Sbjct: 582 VKEVMHLLEEMNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCMPDLSSYNT 641
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE-MANK 179
LH L K D+ A + MK+V P T++ + G ++ + E +
Sbjct: 642 ALHGLVKEDRLTEAFRIFCQMKKV-LAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQP 700
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G D + ++ + +EK+ + + + L + F + +IR C + K EA
Sbjct: 701 GSKADRSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRHLCKSKKALEA 760
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++K+ ES G + YN L+ L + + A + M G
Sbjct: 761 HELVKKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLG 806
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 142/362 (39%), Gaps = 84/362 (23%)
Query: 1 MIENGFPTTARTFN-ILICTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N +P T+N +L C C GEV A ++ P +SYN LH L
Sbjct: 592 MNSNSYPPNLITYNTVLDCLCKNGEVNYALGMLYNMTMKGCM---PDLSSYNTALHGL-- 646
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----------------- 98
+++ +L E ++ QM + APD T ++ + + G +++
Sbjct: 647 VKEDRLTEAFRIFCQMK-KVLAPDYTTLCTILPSFVKNGLMNEALHTLKEYILQPGSKAD 705
Query: 99 ---FHRLLDE-MGRSGFSP----------------DFHTYNILLHVLGKGDKPLAALNLL 138
FH L++ + R+G DF ++ H L K K L A L+
Sbjct: 706 RSSFHSLMEGILKRAGMEKSIEFAENIALSRILLDDFFLSPLIRH-LCKSKKALEAHELV 764
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD-------------- 184
+ +G + L+ GL +D + F EM GC PD
Sbjct: 765 KKFESLGVSLKTGSYNALICGLVDENLIDVAEGLFSEMKRLGCDPDEFTYNLILDAMGKS 824
Query: 185 ---------------------VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
V Y +I+ + + L +A DL+ ++++G P TY
Sbjct: 825 MRIEDMLKVQKEMHCKGYESTYVTYNTIISGLVKSKMLYEAMDLYYKLMSEGFSPTPCTY 884
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ G GK ++A + EM GC PN +YN L++ R AG + E+ ++MV+
Sbjct: 885 GPLLDGLLKDGKIEDAEDLFDEMLDYGCKPNRAIYNILLNGYRLAGNTEKVCELFQNMVD 944
Query: 284 KG 285
+G
Sbjct: 945 QG 946
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G++ ++ D M R + T+ + LG +A L MKE G + +
Sbjct: 126 GRVRDMAQVFDLMQRQIVKANVGTFLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTY 185
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L+ L ++G + MA G +P V Y+V++ ++ ++E L M
Sbjct: 186 NGLIYFLVKSGYDREAMEVYKVMATDGIVPSVRTYSVLMLAF-GKRDVETVVWLLREMED 244
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G PNV++Y IR AG+F+EA ++++ME GC P+ + L+ L +AG++++
Sbjct: 245 HGVKPNVYSYTICIRVLGQAGRFEEAYKILQKMEDEGCKPDVVTNTVLIQILCDAGRVSD 304
Query: 274 AHEVIRHM 281
A +V M
Sbjct: 305 AKDVFWKM 312
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 5/135 (3%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F T+ L G L + M G + + Y +I + +G +A +++ M
Sbjct: 150 FLTIFRSLGMEGGLRSAPVALPMMKEAGIVLNSYTYNGLIYFLVKSGYDREAMEVYKVMA 209
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFD--EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
T G +P+V TY+ ++ F GK D +++EME G PN Y + L AG+
Sbjct: 210 TDGIVPSVRTYSVLMLAF---GKRDVETVVWLLREMEDHGVKPNVYSYTICIRVLGQAGR 266
Query: 271 LAEAHEVIRHMVEKG 285
EA+++++ M ++G
Sbjct: 267 FEEAYKILQKMEDEG 281
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 143/287 (49%), Gaps = 19/287 (6%)
Query: 27 RKVVERFIKSKLFN--FRPFKNS-----------YNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E +K K F + ++ S +N ++H+ + + +L + V+ ++
Sbjct: 105 RKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK 164
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
P ++++N +M +LG LD+ RL + M SG D +TY++L++ L K K
Sbjct: 165 WSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDD 224
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M + G P+ + FTTL+DG + +D + +M ++ PD++ Y +I
Sbjct: 225 ANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIY 284
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L++AQDL D M KG P+ TY ++I G C G + A K M
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL 344
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLVSKF 294
+ + Y L+S L G+ +A +++R M+ E G Y ++++F
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEF 391
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 134/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ + GE+ LA+ V + K ++ RP S+N +++ + +
Sbjct: 128 LECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITK---WSLRPSVVSFNTLMNGYIKL 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G D+ TY++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 245 TTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDG 411
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G + T+++LI C ++ A ++ + + + L P ++ ++
Sbjct: 197 MQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLV---PNGVTFTTLIDGHCK 253
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + +Y+QM + +PD++TYN ++ + G L Q L+DEM G PD T
Sbjct: 254 NRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A M + + +T L+ GL + G + EM
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ G P++ YT++I + G++ L M G +P+V T
Sbjct: 374 SVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 147/288 (51%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G+ +N +I C +V A ++ R ++ RP +YN+++ L
Sbjct: 177 MVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM---EVDGIRPDAVTYNSLISGLCN 233
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + M+ PD+ T+N ++ A + G++ + L +EM R PD T
Sbjct: 234 SGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVT 293
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L++ L + A + M G P V+ ++ L++G ++ ++ F EM+
Sbjct: 294 YSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G + + V YTV+I Y AG+L A+++F M+ G PN+ TYN ++ G C GK +
Sbjct: 354 QRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIE 413
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ +M+ G + + + YN ++ + AG++A+A ++ + KG
Sbjct: 414 KALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKG 461
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 138/282 (48%), Gaps = 8/282 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQ 60
G P T NIL+ C C ++ LA + + +K P ++ ++L+ G R
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMK---LGHEPDIVTFGSLLNGFCRGDRI 167
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y + +++ +M + GY P+++ YN ++ + ++D LL+ M G PD TYN
Sbjct: 168 YDAL-YMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNS 226
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + A +++ M + P V F L+D + G + + ++EM +
Sbjct: 227 LISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRS 286
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y+++I L++A+ +F M++KG P+V TY+ +I G+C + K +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ EM RG N + Y L+ AGKL A E+ + MV
Sbjct: 347 KLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMV 388
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+ P YN I+ L +Q + +M +G PD +TYN ++ G+ D
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
R++ M + PD T+N L+ K + A L M DP ++ ++ L+ GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
LD + F M +KGC PDVV Y+++I Y + ++E LF M +G + N
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY +I+G+C AGK + A + K M G PN + YN L+ L + GK+ +A ++
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 281 MVEKGKYIHLVS 292
M + G +V+
Sbjct: 422 MQKSGMDADIVT 433
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 130/250 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++ +L A+ +++Y ++ ++++QM G ++ T NI++ R +L
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M + G PD T+ LL+ +GD+ AL + + M E+G++P+V+ + T++DGL +
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ +D + M G PD V Y +I+ +G + A + M + P+VFT
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+N++I G+ EA + +EM R +P+ + Y+ L+ L +L EA ++ MV
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318
Query: 283 EKGKYIHLVS 292
KG + +V+
Sbjct: 319 SKGCFPDVVT 328
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 6/285 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G A T+N LI C G A ++V K +++ P ++NA++ A + +
Sbjct: 215 DGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIY---PDVFTFNALIDACVKEGR 271
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E +Y++M PDI+TY++++ +LD+ ++ M G PD TY+I
Sbjct: 272 ISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSI 331
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ K K + L M + G + + +T L+ G RAG L+ + F M G
Sbjct: 332 LINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCG 391
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+++ Y V++ G++EKA + M G ++ TYN +IRG C AG+ +A
Sbjct: 392 VPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAW 451
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +G P+ Y ++ L G EA + R M E G
Sbjct: 452 DLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDG 496
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 116/246 (47%), Gaps = 6/246 (2%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C G + A ++ E I+ L P +Y+ +++ L + E ++
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSL---DPDIVTYSLLIYGLCMYSRLDEAEQMF 314
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M +G PD++TY+I++ + K++ +L EM + G + TY +L+ +
Sbjct: 315 GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRA 374
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A + M G P+++ + L+ GL G ++ +M G D+V Y
Sbjct: 375 GKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTY 434
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I AGE+ A DL+ + KG P+++TY +M+ G G EA + ++M+
Sbjct: 435 NIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKE 494
Query: 249 RGCNPN 254
G PN
Sbjct: 495 DGILPN 500
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
R KLD L M + P ++ LL + K K + L M+ +G ++
Sbjct: 58 RYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
L++ R L F +M G PD+V + ++ + + A +FD M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRM 177
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G PNV YN++I G C + + D A ++ ME G P+ + YN+L+S L N+G+
Sbjct: 178 VEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRW 237
Query: 272 AEAHEVIRHMVEKGKY 287
+A ++ M ++ Y
Sbjct: 238 DDATRMVSCMTKREIY 253
>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 1080
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LIC + L F + K P + +YN +L A+ + + + V ++M
Sbjct: 758 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 817
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+GY +TYN ++ + +L+Q L + GFSP TY LL L K +
Sbjct: 818 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 877
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A NL N M E G + + L++G AGN + + F +M ++G PD+ YT++I
Sbjct: 878 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 937
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ AG+L F ++ G P++ TYN +I G + + +EA ++ EM+ +G
Sbjct: 938 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 997
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YN+L+ +L AGK AEA ++ ++ KG
Sbjct: 998 PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1030
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 3/260 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A ++V++F K F YN+++ L+ + E ++ +M + G PD TYN+
Sbjct: 739 AHELVKKF---KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 795
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + ++++ ++ +EM R G+ + TYN ++ L K + A++L ++ G
Sbjct: 796 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 855
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P+ + L+DGL +AG ++ + F+EM GC + Y +++ + AG EK
Sbjct: 856 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 915
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF M+ +G P++ +Y +I C AG+ ++ T +++ G P+ + YN L+ L
Sbjct: 916 HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 975
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ +L EA + M +KG
Sbjct: 976 GKSKRLEEAVSLFNEMQKKG 995
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + ++ + F P +Y +L LL +
Sbjct: 816 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 875
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ +M + G + YNI++ G ++ L +M G +PD +Y I
Sbjct: 876 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 935
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + L + E+G +P ++ + L+DGL ++ L+ F+EM KG
Sbjct: 936 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 995
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P++ Y +I AG+ +A +++ ++TKG PNVFTYN++IRG+ ++G D A
Sbjct: 996 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1055
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
M GC PN Y L + L
Sbjct: 1056 AAYGRMIVGGCLPNSSTYMQLPNQL 1080
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ L+ R+ + +Y + +G++P TY ++ + G+++ L +EM
Sbjct: 827 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 886
Query: 107 GRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
G + YNILL+ + G +K +L M + G +P + +T ++D L +A
Sbjct: 887 LEYGCKANCTIYNILLNGHRIAGNTEK---VCHLFQDMVDQGINPDIKSYTIIIDTLCKA 943
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G L+ +F ++ G PD++ Y ++I + LE+A LF+ M KG +PN++TY
Sbjct: 944 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1003
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS+I AGK EA M +E+ ++G PN YN L+ +G A+ M+
Sbjct: 1004 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIV 1063
Query: 284 KG 285
G
Sbjct: 1064 GG 1065
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G A T+N L+ + G R+ +E + + P +Y+ ++ A R
Sbjct: 151 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 210
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + W+ ++M G P++ +Y I + + + D+ +R+L +M G PD T+ +
Sbjct: 211 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 270
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ VL + A ++ MK+ P + + TL+D G+ + ++ M G
Sbjct: 271 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+VV YT +I + G + +A ++FD M KG +P ++YNS+I GF A +F +A
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K M+ G PN + ++ +G+ +A + M KG
Sbjct: 391 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 435
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G + RT+++L+ G+ V+ + + +P SY + L ++
Sbjct: 186 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKR 245
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M +EG PD++T+ +++ G++ + +M +S PD TY
Sbjct: 246 FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 305
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G + + + N MK G++ +V+ +T ++D L + G + FDEM KG
Sbjct: 306 LLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 365
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+ Y +I+ ++ A A +LF M G PN +T+ I + +G+ +A
Sbjct: 366 IVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAI 425
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+G P+ + N ++ L +G+L A V + G
Sbjct: 426 QRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 470
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-RQYKLIEWVYQQ 70
T+ L+ G+ G ++ V+E + K + +Y A++ AL + R ++ +E ++ +
Sbjct: 302 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-MFDE 360
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M +G P+ +YN ++ + + L M G P+ +T+ + ++ GK +
Sbjct: 361 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 420
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ A+ MK G P V+ ++ GL+++G L K F E+ G PD + YT+
Sbjct: 421 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 480
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI A + ++A +F MI +P+V NS+I AG+ DEA + +++
Sbjct: 481 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 540
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P YNTL++ L GK+ E ++ M
Sbjct: 541 LEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 571
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G + A+ V F K K + +P + +Y +L + + ++ M +G
Sbjct: 274 VLCDAGRISDAKDV---FWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 330
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y +++ Y V+ A ++G++ + + DEM + G P+ ++YN L+ K D+ AL
Sbjct: 331 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 390
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L HM G P+ ++ ++G ++ M +KG +PDVV ++
Sbjct: 391 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 450
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G L A+ +F + G P+ TY MI+ A KFDEA + +M C P+
Sbjct: 451 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 510
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
L N+L+ L AG+ EA + + E
Sbjct: 511 LAVNSLIDTLYKAGRGDEAWRIFYQLKE 538
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 126/259 (48%), Gaps = 1/259 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ G + K ++R+ K P + NA+L L + + + V+ ++ G +PD
Sbjct: 416 GKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 475
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TY +++ + K D+ ++ +M + PD N L+ L K + A +
Sbjct: 476 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 535
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+KE+ +P+ + TL+ GL R G + + +EM + P+++ Y ++ G
Sbjct: 536 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 595
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A D+ M TKG +P++ +YN++I G +++EA ++ +M+ + P++ T
Sbjct: 596 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCT 654
Query: 261 LVSNLRNAGKLAEAHEVIR 279
++ + G + EA +I+
Sbjct: 655 ILPSFVKIGLMKEALHIIK 673
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 44 FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
F N Y ++ I++Y+L M +G PD++ N V+ + G+L R+
Sbjct: 411 FINYYGKSGESIKAIQRYEL-------MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 463
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
E+ G SPD TY +++ K K A+ + M E P VL +L+D L +A
Sbjct: 464 HELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKA 523
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G D F ++ P Y ++ G++++ L + M PN+ TY
Sbjct: 524 GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 583
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N+++ C G ++A M+ M ++GC P+ YNT++ L + EA + M
Sbjct: 584 NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 641
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIEN N LI T + G + F + K N P +YN +L L +
Sbjct: 501 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 560
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + ++M Y P+++TYN ++ + G ++ +L M G PD +YN
Sbjct: 561 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNT 620
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV------------------GFDPSVLHFT-------- 154
+++ L K ++ A ++ MK+V G LH
Sbjct: 621 VIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 680
Query: 155 ---------TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+LM+G+ + ++ F + +A+ G D +I + +A
Sbjct: 681 SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 740
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L + G YNS+I G D A + EM+ GC P+ YN L+ +
Sbjct: 741 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 800
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ ++ E +V M KG
Sbjct: 801 GKSMRIEEMLKVQEEMHRKG 820
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 133/357 (37%), Gaps = 74/357 (20%)
Query: 1 MIENGFPTTARTFN-ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M + +P T+N IL C C G ++ P +SYN +++ L+
Sbjct: 571 MYHSNYPPNLITYNTILDCLCKN-GAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEE 629
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL--------DQF------------ 99
+Y ++ QM + PD T ++ + ++G + D F
Sbjct: 630 RYNEAFSIFCQMK-KVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSC 688
Query: 100 HRLLDEM----------------GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
H L++ + SG + D L+ L K K L A L+ K
Sbjct: 689 HSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKS 748
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD------------------- 184
G + +L+ GL +D + F EM GC PD
Sbjct: 749 FGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEE 808
Query: 185 ----------------VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
V Y +I+ + + LE+A DL+ ++++G P TY ++
Sbjct: 809 MLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLD 868
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G AG+ ++A + EM GC N +YN L++ R AG + + + MV++G
Sbjct: 869 GLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 925
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%)
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M +G + +TYN L++ L K AL + M G PSV ++ LM +
Sbjct: 148 LPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGK 207
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+++ + EM G P+V YT+ I A ++A + M +G P+V T
Sbjct: 208 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVIT 267
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ +I+ C AG+ +A + +M+ P+ + Y TL+ + G E+ M
Sbjct: 268 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 327
Query: 283 EKG 285
G
Sbjct: 328 ADG 330
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F + GL G L + M G + + Y ++ + +G +A +++ M+
Sbjct: 128 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 187
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G +P+V TY+ ++ F + +++EME+ G PN Y + L A +
Sbjct: 188 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 247
Query: 273 EAHEVIRHMVEKG 285
EA+ ++ M +G
Sbjct: 248 EAYRILAKMENEG 260
>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 704
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 124/246 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S + +L + +R+ V M G+A ++ +NI++ R + + LL EM
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R+ PD +YN ++ +G + AL L N MK G S++ + L+D +AG +
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM G D+V YT +I + GEL++ + LFD ++ +G P TYN++
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
IRGFC G+ EA + + M RG PN Y L+ L GK EA +++ M+EK +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDE 348
Query: 287 YIHLVS 292
+ V+
Sbjct: 349 EPNAVT 354
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 114/218 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M PD+ +YN V+ +L++ L +EM SG S T+ IL+
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A+ L MK +G + ++ +T+L+ G G LD K FDE+ +G P +
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + G+L++A ++F+ MI +G PNV+TY +I G C GK EA ++ M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ PN + YN +++ L G +A+A E++ M ++
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 4/276 (1%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NIL+ C G++ A K++ +K + P SYNA++H L + +Y
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYT-DPDVISYNALIHGLCKENRLHQALDIY 447
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ ++ A D +T NI++ + + G +++ L ++ S + TY ++ K
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A LL M+ PSV + L+ L + G+LD F+EM PDVV +
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+MI + AG+++ A+ L GM G P++FTY+ +I F G DEA + +M
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + ++++ + G+ + E+++ +V+K
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 140/297 (47%), Gaps = 8/297 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G A T+N LI C G++ A ++ E I+ + RP +Y ++ L G
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV---RPNVYTYTGLIDGLCG 329
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + K + M ++ P+ +TYNI++ + G + +++ M + PD T
Sbjct: 330 VGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 118 YNILLHVL-GKGDKPLAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
YNILL L KGD A+ L +K+ + DP V+ + L+ GL + L +D
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ K D V +++ S + AG++ KA +L+ + + N TY +MI GFC G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ A ++ +M P+ YN L+S+L G L +A + M + +VS
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 12/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF NIL+ C E G A ++ ++ L P SYN ++
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM---PDVFSYNTVIRGFCE 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + +M G + ++T+ I++ A + GK+D+ L EM G D
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 118 YNILLHVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
Y L+ G+ D+ A L + + E G P + + TL+ G + G L F+
Sbjct: 250 YTSLIRGFCDCGELDRGKA---LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M +G P+V YT +I G+ ++A L + MI K + PN TYN +I C G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+A +++ M+ R P+ + YN L+ L G L EA +++ M++ Y
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE A T+NI+I C G V A ++VE K + RP +YN +L L
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT---RPDNITYNILLGGLCA 399
Query: 58 IRQY-KLIEWVYQQMSDEGYA-PDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGF 111
+ + +Y + D Y PD+++YN + +C + RL + LD + L++++G
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG---- 455
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+ D T NILL+ K A+ L + + + +T ++DG + G L+ K
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+M P V Y +++S G L++A LF+ M P+V ++N MI G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG A +++ M G +P+ Y+ L++ G L EA MV+ G
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 130 bits (326), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 136/289 (47%), Gaps = 19/289 (6%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ LI C G + A KV + + P YNA++ + +
Sbjct: 185 TYATLISGWCKIGRMEDAAKVFDEMLTQG--EVAPSAVMYNALIGGYCDRGKLDVALQYR 242
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M G A + TYN+++ A + G+ + +L+EM R+G SPD TYNIL++ K
Sbjct: 243 EDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKE 302
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL + M G + + +T+L+ SR G + F KG PDVV Y
Sbjct: 303 GNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMY 362
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I S+ A G++E+A ++ M K P+ TYN++IRGFC+ G+ DEA ++ EM
Sbjct: 363 NALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTK 422
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
RG P+ L G+ +A +++ MV KG YI L+
Sbjct: 423 RGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLI 463
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 137/320 (42%), Gaps = 47/320 (14%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
P TFNI++ C G+ A +++ + RP +YN ++ + +
Sbjct: 112 LPLCTTTFNIMLRHLCATGKPVRALELLRQMP-------RPNAVTYNTVIAGFCARGRVQ 164
Query: 63 LIEWVYQQMSDEG-YAPDILTYNIVMCAKYRLGKLDQFHRLLDE---------------- 105
V ++M + G APD TY ++ ++G+++ ++ DE
Sbjct: 165 AALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNA 224
Query: 106 --------------------MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
M + G + TYN+L+H L + A +L M+ G
Sbjct: 225 LIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNG 284
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P V + L++G + GN F+EM+ KG V YT +I ++ G++++
Sbjct: 285 LSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETD 344
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF + KG P+V YN++I C G + A +M EME + P+ + YNTL+
Sbjct: 345 RLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGF 404
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+L EA +I M ++G
Sbjct: 405 CLLGRLDEARGLIDEMTKRG 424
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG T+NILI + G +K +E F + R +Y ++++A Q
Sbjct: 280 MQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQ 339
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +++ +G PD++ YN ++ + G +++ ++ EM + PD TYN
Sbjct: 340 VQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNT 399
Query: 121 LLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ +LG+ D+ A L++ M + G P + GL + G D + EM
Sbjct: 400 LIRGFCLLGRLDE---ARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMV 448
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQD 206
KG PD Y +I E A D
Sbjct: 449 GKGITPDDSTYISLIEGLTTVDEQMSAAD 477
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 5/100 (5%)
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ +M+ A G+ +A +L M PN TYN++I GFC G+ A +M+EM
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREMR 174
Query: 248 SR-GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
R G P+ Y TL+S G++ +A +V M+ +G+
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGE 214
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 144/292 (49%), Gaps = 6/292 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T NI+I C C + A V+ + +K + P ++N +++ L +
Sbjct: 94 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK---LGYEPDTTTFNTLINGLCLESK 150
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G P+++TYN ++ + G LL +M D TY+
Sbjct: 151 VSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYST 210
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + AA++L M+ G S++ + +L+ GL +AG + +M ++
Sbjct: 211 IIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ + V+I ++ G+L++A +L+ MITKG PN TYNS++ G+CM + EA
Sbjct: 271 IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEAN 330
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ M C+P+ + + +L+ ++ E ++ R + ++G + V+
Sbjct: 331 NMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVT 382
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 142/298 (47%), Gaps = 14/298 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+ENG T+N + IC G+ LA RK+ ER +K+ +F +Y+ I+
Sbjct: 161 MVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVF-------TYSTIID 213
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L ++++M +G ++TYN ++ + GK + +LL +M P
Sbjct: 214 SLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIP 273
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+N+L+ V K K A L M G P+ + + +LMDG L
Sbjct: 274 NVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M C PD+V +T +I Y +++ LF + +G + N TY+ +++GFC +
Sbjct: 334 DLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQS 393
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
GK + A + +EM S G P+ + Y L+ L + GKL +A E+ + + + +V
Sbjct: 394 GKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIV 451
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 130/251 (51%), Gaps = 2/251 (0%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + ++ + +Q+ L+ ++M G A +I T NI++ R
Sbjct: 55 EMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCC 114
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K + +L ++ + G+ PD T+N L++ L K A+ L+ M E G P+V+ +
Sbjct: 115 KTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYN 174
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++++G+ ++G+ +M + DV Y+ +I S G ++ A LF M TK
Sbjct: 175 SIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 234
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G ++ TYNS++ G C AGK+++ ++K+M SR PN + +N L+ GKL EA
Sbjct: 235 GIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEA 294
Query: 275 HEVIRHMVEKG 285
+E+ + M+ KG
Sbjct: 295 NELYKEMITKG 305
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G ++ T+N L+ C G+ ++++ K+ P ++N ++ +
Sbjct: 231 METKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKII---PNVITFNVLIDVFVK 287
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y++M +G +P+ +TYN +M +L + + +LD M R+ SPD T
Sbjct: 288 EGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVT 347
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + + L + + G + + ++ L+ G ++G L+ + F EM
Sbjct: 348 FTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +PDV+ Y +++ G+LEKA ++F+ + ++ Y +I G C GK +
Sbjct: 408 SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE 467
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + + +G PN + Y ++S L G L+EA+ ++R M E G
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 127/274 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN+LI + G ++ E + + P +YN+++ + + M
Sbjct: 277 TFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLM 336
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+PDI+T+ ++ ++ ++D+ +L ++ + G + TY+IL+ + K
Sbjct: 337 VRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKL 396
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L M +G P V+ + L+DGL G L+ F+++ D+V YT++
Sbjct: 397 EIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTII 456
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I G++E A +LF + KG PNV TY MI G C G EA ++++ME G
Sbjct: 457 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 516
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YNTL+ G L + ++I M G
Sbjct: 517 EPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 550
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 6/253 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+N L+ C + A +++ +++ N P ++ +++
Sbjct: 301 MITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN---NCSPDIVTFTSLIKGYCK 357
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ +++++S G + +TY+I++ + GKL+ L EM G PD T
Sbjct: 358 VKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMT 417
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K AL + +++ + ++ +T +++G+ + G ++ F +
Sbjct: 418 YGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLP 477
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ YTVMI+ G L +A L M G PN TYN++IR G
Sbjct: 478 CKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLT 537
Query: 238 EACTMMKEMESRG 250
+ +++EM+S G
Sbjct: 538 ASAKLIEEMKSCG 550
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 71/151 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L M PS++ F+ G++ + F +M G ++ +MI
Sbjct: 49 AIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMIN 108
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ + A + ++ G P+ T+N++I G C+ K EA ++ M GC P
Sbjct: 109 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP 168
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
N + YN++V+ + +G + A +++R M E+
Sbjct: 169 NVVTYNSIVNGICKSGDTSLALDLLRKMDER 199
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F EM +P +V ++ + + + D M G N++T N MI FC
Sbjct: 52 LFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFC 111
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
K A +++ ++ G P+ +NTL++ L K++EA ++ MVE G ++V
Sbjct: 112 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVV 171
Query: 292 S 292
+
Sbjct: 172 T 172
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 146/292 (50%), Gaps = 6/292 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
NG T NI+I C C + A V+ + +K + P ++N +++ L +
Sbjct: 117 NGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK---LGYEPDTTTFNTLINGLCLEGK 173
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + G PD++TYN ++ R G +L +M D TY+
Sbjct: 174 VSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYST 233
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + AA++L M+ G SV+ + +L+ GL +AG + +M ++
Sbjct: 234 IIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+V+ + V++ ++ G+L++A +L+ MIT+G PN+ TYN+++ G+CM + EA
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ M C+P+ + + +L+ ++ + +V R++ ++G + V+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVT 405
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 136/288 (47%), Gaps = 14/288 (4%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+ENG T+N + IC G+ LA RK+ ER +K+ +F +Y+ I+
Sbjct: 184 MVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVF-------TYSTIID 236
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+L ++++M +G ++TYN ++ + GK + LL +M P
Sbjct: 237 SLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP 296
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+N+LL V K K A L M G P+++ + TLMDG L
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M C PD+V +T +I Y ++ +F + +G + N TY+ +++GFC +
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GK A + +EM S G P+ + Y L+ L + GKL +A E+ +
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 135/258 (52%), Gaps = 2/258 (0%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP ++ A+ +Q+ L+ +Q+ G A +I T NI++ R
Sbjct: 78 EMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCC 137
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K + +L ++ + G+ PD T+N L++ L K A+ L++ M E G P ++ +
Sbjct: 138 KTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYN 197
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++++G+ R+G+ +M + DV Y+ +I S G ++ A LF M TK
Sbjct: 198 SIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +V TYNS++RG C AGK+++ ++K+M SR PN + +N L+ GKL EA
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 275 HEVIRHMVEKGKYIHLVS 292
+E+ + M+ +G ++++
Sbjct: 318 NELYKEMITRGISPNIIT 335
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ TFN LI C G+V A +V+R +++ +P +YN+I++ +
Sbjct: 153 GYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN---GCQPDMVTYNSIVNGICRSGDT 209
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
L + ++M + D+ TY+ ++ + R G +D L EM G TYN L
Sbjct: 210 SLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K LL M P+V+ F L+D + G L + EM +G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGI 329
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+++ Y ++ Y L +A ++ D M+ P++ T+ S+I+G+CM + D+
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + RG N + Y+ LV +GK+ A E+ + MV G
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 135/323 (41%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G ++ T+N L+ C G+ +++ + ++ P ++N +L +
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV---PNVITFNVLLDVFVK 310
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y++M G +P+I+TYN +M +L + + +LD M R+ SPD T
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 118 -----------------------------------YNILLHVLGKGDKPLAALNLLNHMK 142
Y+IL+ + K A L M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P V+ + L+DGL G L+ F+++ +V YT +I G++E
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A +LF + KG PNV TY MI G C G EA ++++ME G PN YNTL+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
G L + ++I M G
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCG 573
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 79/193 (40%), Gaps = 36/193 (18%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++ + KL E ++Q+M G PD++TY I++ GKL++ + +++
Sbjct: 405 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Query: 107 GRS-----------------------------------GFSPDFHTYNILLHVLGKGDKP 131
+S G P+ TY +++ L K
Sbjct: 465 QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSL 524
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A LL M+E G P+ + TL+ R G+L A +EM + G D M
Sbjct: 525 SEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIK-M 583
Query: 192 ITSYIAAGELEKA 204
+ + +GEL+K+
Sbjct: 584 VIDMLLSGELDKS 596
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+ IL+ C G++ A ++ E KSK+ Y I+ +
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM---YTTIIEGMCK 485
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ + +G P+++TY +++ + G L + + LL +M G +P+ T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + A+ L+ MK GF ++D L +G LD K F D ++
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELD--KSFLDMLS 602
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Query: 162 RAGNLDACK----YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
R+G +D K F EM +P +V ++ ++ + D + G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIA 120
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
N++T N MI FC K A +++ ++ G P+ +NTL++ L GK+++A +
Sbjct: 121 HNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVL 180
Query: 278 IRHMVEKGKYIHLVS 292
+ MVE G +V+
Sbjct: 181 VDRMVENGCQPDMVT 195
>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
Length = 816
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 133/277 (48%), Gaps = 4/277 (1%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++NIL+ C G+ G A ++ R + P +YN ++ ++
Sbjct: 186 SYNILLKSLCNQGKSGQADDLL-RMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 244
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD++TY+ V+ A + +D+ L +M G PD TYN L++
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ + M+ P V+ TLM L + G + + FD MA KG PDV Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+M+ Y G L DLFD M+ G P+++T+N +I+ + G D+A + EM
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 424
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y T+++ L GK+ +A E M+++G
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQG 461
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 118/239 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ A ++ +M D G P ++TY V+ A R+GK+D ++M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD + Y+ L+ L A L++ + G ++ F ++++ L + G +
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FD N G PD V Y +++ Y G++EKA +FD M++ G PNV Y ++
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C G+ DE ++ +EM +G P+ ++YN ++ L AG+ A M E G
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESG 636
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L +++V+R I L +Y++++HAL R E +QM ++G PD TYN
Sbjct: 243 LFKEMVQRGIPPDLV-------TYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYN 295
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ G+ + R+ EM R PD N L+ L K K A ++ + M
Sbjct: 296 NLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G +P V +T +++G + G L FD M G PD+ + V+I +Y G L+KA
Sbjct: 356 GQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKA 415
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+F+ M G P+V TY ++I C GK D+A +M +G P+ Y+ L+
Sbjct: 416 MIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQG 475
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G L +A E+I ++ G + +V
Sbjct: 476 FCTHGSLLKAKELISEIMNNGMRLDIV 502
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T++ ++ C + A + + + + P +YN +++
Sbjct: 247 MVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL---PDNWTYNNLIYGYSS 303
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+K V+++M + PD++ N +M + + GK+ + + D M G +PD +
Sbjct: 304 TGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 363
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I+L+ + +L + M G P + F L+ + G LD F+EM
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P VV Y +I + G+++ A + F+ MI +G +P+ + Y+ +I+GFC G
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ E+ + G + + + ++++NL G++ +A + V G
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVG 531
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 117/248 (47%), Gaps = 2/248 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGKLDQFHRLLD 104
SYN +L +L + + + + M++ G +PD++ YN V+ ++ G +++ L
Sbjct: 186 SYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 245
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM + G PD TY+ ++H L K A L M G P + L+ G S G
Sbjct: 246 EMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTG 305
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F EM + +PDVV ++ S G++++A+D+FD M KGQ P+VF+Y
Sbjct: 306 QWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYT 365
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M+ G+ G + + M G P+ +N L+ N G L +A + M +
Sbjct: 366 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDH 425
Query: 285 GKYIHLVS 292
G H+V+
Sbjct: 426 GVKPHVVT 433
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 100/187 (53%), Gaps = 2/187 (1%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDG 159
LL G PD +YNILL L K A +LL M E G P V+ + T++DG
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ G+++ F EM +G PD+V Y+ ++ + A ++KA+ M+ KG LP+
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPD 290
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+TYN++I G+ G++ EA + KEM + P+ + NTL+ +L GK+ EA +V
Sbjct: 291 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFD 350
Query: 280 HMVEKGK 286
M KG+
Sbjct: 351 TMAMKGQ 357
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TFN+LI G+ K + F + + +P +Y ++ AL I +
Sbjct: 387 MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 446
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM D+G PD Y+ ++ G L + L+ E+ +G D +
Sbjct: 447 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 506
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ L K + + A N+ + VG P + + LMDG G ++ FD M + G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ Y G +++ LF M+ KG P+ YN +I G AG+ A
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
EM G N Y+ ++ L
Sbjct: 627 VKFHEMTESGIAMNKCTYSIVLRGL 651
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SP +TY IL+ + +P AL + G + + L+ G A
Sbjct: 105 GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 164
Query: 167 D-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL--PNVFTY 223
D A GC+PDV Y +++ S G+ +A DL M G + P+V Y
Sbjct: 165 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAY 224
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I GF G ++AC + KEM RG P+ + Y+++V L A + +A +R MV
Sbjct: 225 NTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVN 284
Query: 284 KG 285
KG
Sbjct: 285 KG 286
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A+ + + + L P YN ++ + + + V+ M G
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGL---HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI 567
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+++ Y ++ ++G++D+ L EM + G P YNI++ L + + + A
Sbjct: 568 EPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKV 627
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M E G + ++ ++ GL + D + F E+ D++ MI
Sbjct: 628 KFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMF 687
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
+E+A+DLF + G +P TY+ MI G +EA M M++ GC P+
Sbjct: 688 QTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSR 747
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ N +V L ++ A + + E+
Sbjct: 748 LLNHVVRELLKKNEIVRAGAYLSKIDER 775
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A +N+L+ C G++ A +V + + + + P Y +++ I +
Sbjct: 531 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGI---EPNVVGYGTLVNGYCKIGRI 587
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++++M +G P + YNI++ + G+ EM SG + + TY+I+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L K A+ L ++ + ++ T++ G+ + ++ K F ++ G
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P V Y++MIT+ + G +E+A+D+F M G P+ N ++R + A
Sbjct: 708 VPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 767
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+ +++ R + L LV + G E
Sbjct: 768 YLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 82/212 (38%), Gaps = 50/212 (23%)
Query: 89 AKYRLGKL--DQFHRLLDEMGRSGFSPDFHTYNILLHVLGK-------GDKPLAALNLLN 139
A+ R G L ++ H LLDE+ R G N L L + G P A+ L N
Sbjct: 38 ARVREGTLRPEEAHDLLDELQRRGTPVLDRDLNGFLAALARAPSSAACGSGPALAVALFN 97
Query: 140 HMKEVGFDPSVLHFTT-----LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
P VL T+ LMD +RA + FF ++ G D + I S
Sbjct: 98 RAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAI-----IAS 152
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC-TMMKEMESRGCNP 253
+ +++GFC A + DEA ++ GC P
Sbjct: 153 H------------------------------LLKGFCEAKRTDEALDILLHRTPELGCVP 182
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN L+ +L N GK +A +++R M E G
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGG 214
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 139/328 (42%), Gaps = 51/328 (15%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI + + GL + F + + P +Y A++HA L +Q
Sbjct: 318 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 377
Query: 65 EWVYQQMSDEG------------------------------------------------- 75
++ +M D G
Sbjct: 378 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 76 --YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
AP+++TY ++ + K+D H LLD M SG P+ Y+ L+ K K +
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 497
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A + M + G+ PSV +T+L+D + + G LD +M C P+VV YT MI
Sbjct: 498 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
GE EKA L M KG PNV TY ++I G AGK D + + +M +GC+P
Sbjct: 558 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N++ Y L+++L AG L +A ++ M
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 110/244 (45%), Gaps = 51/244 (20%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+GK D+ +L+ EM R GF PD TY+ ++ L K A L MK VG P V
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF---- 208
+T L+D +AG ++ ++ F+EM + GC P VV YT +I +Y+ A ++ +A D+F
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 209 ---------------DGMITKGQL--------------------------------PNVF 221
DG+ G + PNV
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +++ G C A K D A ++ M S GC PN +VY+ L+ AGK+ A EV M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505
Query: 282 VEKG 285
+ G
Sbjct: 506 TKCG 509
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 51/336 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ GF T++ +I K F + K+ P +Y ++ +
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----FHRLLDE----------- 105
+ +W++++M G +P ++TY ++ A + ++ Q FHR++D
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 106 ------------------------------------MGRSGFSPDFHTYNILLHVLGKGD 129
R +P+ TY L+ L K
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A LL+ M G +P+ + + L+DG +AG +D+ + F +M G +P V YT
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G L+ A + M+ PNV TY +MI G C G+ ++A ++ ME +
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC+PN + Y L+ L AGK+ + ++ M KG
Sbjct: 579 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 17/286 (5%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N C CG VG K + + F P ++Y+ ++ L + + ++Q+M
Sbjct: 258 NFARCLCG-VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G PD+ TY I++ + + G ++Q L +EM G SP TY L+H K +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC----------------KYFFDEMA 177
A ++ + M + G P+ + + L+DGL +AGN+ ++F
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P+VV Y ++ A +++ A +L D M++ G PN Y+++I GFC AGK D
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + +M G P+ Y +L+ + G+L A +V+ M++
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 120/277 (43%), Gaps = 33/277 (11%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
P +Y A++ L + + M G P+ + Y+ ++ + GK+D
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 498
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+ +M + G+ P HTY L+ + K + A+ +L+ M + P+V+ +T ++DG
Sbjct: 499 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 558
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L R G + M KGC P+VV YT +I AG+++ + DLF M KG PN
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 618
Query: 220 VFTYNSMIRGFCMAGKFDEA--------------------CT-------------MMKEM 246
TY +I C AG D+A C +++EM
Sbjct: 619 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 678
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
ES G P VY L+ AG+L A E+ + M+E
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 14/253 (5%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y +L L +Q + + M EG P+ +N ++ + ++L
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD----------PSVLH 152
L+ M G P + YNI + + G + L + +LL+ +++ + +V +
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSIC-GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 258
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F + G+ G D EM KG +PD Y+ +IT A ++EKA LF M
Sbjct: 259 FARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+V+TY +I FC AG ++A + +EM S GC+P + Y L+ A ++
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375
Query: 273 EAHEVIRHMVEKG 285
+A+++ MV+ G
Sbjct: 376 QANDIFHRMVDAG 388
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 136/318 (42%), Gaps = 47/318 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G ++ LI C G++ A++V F++ + P ++Y +++ +
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV---FLQMTKCGYLPSVHTYTSLIDRMFK 526
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L V QM + P+++TY ++ R+G+ ++ +LL M G SP+ T
Sbjct: 527 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 586
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF---- 173
Y L+ LGK K +L+L M G P+ + + L++ L AG LD +
Sbjct: 587 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646
Query: 174 -----------------------------DEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
+EM + G +P Y ++I + AG LE A
Sbjct: 647 QTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706
Query: 205 QDLFDGMITKGQLPNVFT-----YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L M+ ++P+ Y S+I+ C+A + +EA + EM RG P V+
Sbjct: 707 MELHKEMM---EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFV 763
Query: 260 TLVSNLRNAGKLAEAHEV 277
L+ L K EA ++
Sbjct: 764 CLIKGLVEVKKWDEALQL 781
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ D GY P +TYN ++ G++D R+ EM SGF D T H L K +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AL+++ F + T ++ GL A D F M C+P+VV Y
Sbjct: 91 WADALDMIERED---FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+++ ++ +L + + + M+T+G PN +NS++ +C + A ++ M + G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207
Query: 251 CNPNFLVYNTLVSNLRNAGKL 271
C P ++VYN + ++ KL
Sbjct: 208 CPPGYVVYNIFIGSICGQEKL 228
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 109/255 (42%), Gaps = 9/255 (3%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
K F +RP K +YNA++ L Q L V ++MS+ G+ D T V C + L K
Sbjct: 32 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFT---VGCFAHALCKE 88
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
++ LD + R F D ++ L + A++ L+ M+ P+V+ + TL
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ G + L CK + M +GC P+ + ++ SY + A L + M T G
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 217 LPNVFTYNSMIRGFCMAGK------FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
P YN I C K D A + EM + C N + L GK
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268
Query: 271 LAEAHEVIRHMVEKG 285
+A ++I+ M+ KG
Sbjct: 269 FDKAFQLIKEMMRKG 283
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 5/183 (2%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D + G+ P TYN L+ VL + + M E GF L +
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 164 GNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G DA D + + D V T MI+ + A ++A M +PNV T
Sbjct: 89 GRWADA----LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +++ GF + ++ M + GCNPN ++N+LV + N A A++++ M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 283 EKG 285
G
Sbjct: 205 TCG 207
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 118/222 (53%), Gaps = 7/222 (3%)
Query: 67 VYQQMSDEGYAPDILTYNI---VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ M + G D+ ++N V+C R+ K + R L R FS D TYN++++
Sbjct: 146 LFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL----RGRFSADTVTYNVIVN 201
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ AL +L M + G +P++ + T++ G RAG + FF EM + C
Sbjct: 202 GWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEI 261
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
DVV YT ++ + AGE+++ +++FD MI +G LP+V TYN+ I+ C + A M
Sbjct: 262 DVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMF 321
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM +G PN YN L+ L +AGK + E+++ M +G
Sbjct: 322 EEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEG 363
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 108/216 (50%), Gaps = 1/216 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S+N IL L ++ + +++ + ++ D +TYN+++ + + + +L EM
Sbjct: 161 SFNTILDVLCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCLIKRTPKALEVLKEM 219
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P+ TYN +L + + A MK+ + V+ +TT++ G AG +
Sbjct: 220 VDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEI 279
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FDEM +G +P V Y I +E A +F+ M+ KG PNV TYN +
Sbjct: 280 KRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVL 339
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
IRG AGKF +M+ ME+ GC PNF YN ++
Sbjct: 340 IRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMI 375
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 121/258 (46%), Gaps = 11/258 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I++ I++ V ++M D G P++ TYN ++ +R G++ Q EM
Sbjct: 195 TYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEM 254
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ D TY ++H G + N+ + M G PSV + + L + ++
Sbjct: 255 KKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSV 314
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F+EM KG P+V Y V+I AG+ + ++L M +G PN TYN M
Sbjct: 315 ENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMM 374
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS---------NLRNAGKLAEAHEV 277
IR + + ++A + ++M + C PN YN L+S ++ AG A A E+
Sbjct: 375 IRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEI 434
Query: 278 IRHMVEKGKYIHLVSKFK 295
+R + G L+ KF+
Sbjct: 435 LRLQSKSGG--RLLRKFR 450
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 1/210 (0%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y D ++++ + RL L+ M P T+ I+ KP A+
Sbjct: 85 YVHDASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAV 144
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L +M E G + F T++D L ++ ++ F + + D V Y V++ +
Sbjct: 145 KLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS-ADTVTYNVIVNGW 203
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
KA ++ M+ +G PN+ TYN+M++GF AG+ +A EM+ R C +
Sbjct: 204 CLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDV 263
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y T+V AG++ V M+ +G
Sbjct: 264 VTYTTVVHGFGVAGEIKRTRNVFDEMIREG 293
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 108/239 (45%), Gaps = 11/239 (4%)
Query: 62 KLIEWVYQQMSDE---GYAPDILTYNIVMCAKYRLG----KLDQFHRLLDEMGRSGFSPD 114
KLI +Q + D+ T N+V RL K QF LD R + D
Sbjct: 30 KLILSFHQTLDDQFILSTKTTPWTPNLVNSVLKRLWNHGPKALQFFHFLDNHHRE-YVHD 88
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
++++ + + + +L++ M+ + PS F + + + +G D F
Sbjct: 89 ASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLFL 148
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP-NVFTYNSMIRGFCMA 233
M GC D+ + ++ + +EKA +LF + +G+ + TYN ++ G+C+
Sbjct: 149 NMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRAL--RGRFSADTVTYNVIVNGWCLI 206
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +A ++KEM RG NPN YNT++ AG++ +A E M ++ I +V+
Sbjct: 207 KRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVT 265
>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 138/293 (47%), Gaps = 18/293 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M +G T+ +LI C G AR V + ++ +P Y+ +LH
Sbjct: 299 MSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRK---GQKPNSTIYHILLHGYAT 355
Query: 54 --ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
AL+ +R + M +G + +NI++CA + G +D+ EM ++G
Sbjct: 356 KGALIDVRD------LLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGL 409
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD +Y+ ++H+L K + A+ N M G P+++ FT+L+ GL G +
Sbjct: 410 RPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEE 469
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
EM N+G PD + ++ + G + +AQD FD +I G PNV +YN++I G+C
Sbjct: 470 LAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYC 529
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GK DE+ M S G P+ YN L++ G++ +A + R M K
Sbjct: 530 FVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRK 582
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG---FDPSVLHF 153
D + M G++PD +YN L+ L K AL LL HM G P+V+ +
Sbjct: 147 DAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSY 206
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+T++DG + G +D + FDEM +G PDVV Y+ +I A + KA+ + M
Sbjct: 207 STIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFD 266
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG +PN TYN MIRG+C G+ +EA ++K+M G P+ + Y L+ G+ AE
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAE 326
Query: 274 AHEVIRHMVEKGK 286
A V MV KG+
Sbjct: 327 ARSVFDSMVRKGQ 339
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 35/327 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G P R FNILIC + G K + F + + RP SY+ ++H L I +
Sbjct: 369 MIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGR 428
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + QM EG +P+I+++ ++ +G+ + L EM G PD N
Sbjct: 429 VEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNT 488
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + + A + + + +G P+V+ + TL+DG G +D FD M + G
Sbjct: 489 IMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIG 548
Query: 181 CMPDVVCYTVMITSYIAAGELEK-----------------------------------AQ 205
PD Y ++ Y G +E A+
Sbjct: 549 LRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAAR 608
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L+ M+ +G + TYN+++ G C DEA M +++ S+ + +N +++ L
Sbjct: 609 ELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINAL 668
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ EA + MV +G H+++
Sbjct: 669 LKVGRIDEAKSLFSAMVLRGPVPHVIT 695
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI GFP T++ LI C + A +++ + P +YN ++
Sbjct: 229 MIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVM---PNTRTYNIMIRGYCS 285
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q + + ++MS G PD++TY +++ ++G+ + + D M R G P+
Sbjct: 286 LGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTI 345
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILLH + +LL+ M G F L+ ++ G +D F EM
Sbjct: 346 YHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMR 405
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDVV Y+ +I G +E A F+ M+++G PN+ ++ S+I G C G++
Sbjct: 406 QNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWK 465
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + EM +RG +P+ + NT++ NL G++ EA + ++ G ++VS
Sbjct: 466 KVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVS 520
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 131/292 (44%), Gaps = 38/292 (13%)
Query: 39 FNFRPFKNSYNAILHAL-LGIRQYKLIEWVYQQMSDEGY--APDILTYNIVMCAKYRLGK 95
+ P SYNA++ L + + + +E + +D GY +P++++Y+ ++ ++ G+
Sbjct: 159 LGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGE 218
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+D+ + L DEM GF PD TY+ L+ L K A +L HM + G P+ +
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++ G G L+ +M+ G PDVV Y ++I Y G +A+ +FD M+ KG
Sbjct: 279 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338
Query: 216 QLPNVFTYNSMIRGFCMAGKF-----------------------------------DEAC 240
Q PN Y+ ++ G+ G D+A
Sbjct: 339 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 398
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
T EM G P+ + Y+T++ L G++ +A MV +G +++S
Sbjct: 399 TAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIIS 450
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G RT+NI+I C+ G++ A +++++ S L +P +Y ++
Sbjct: 264 MFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGL---QPDVVTYILLIQYYCK 320
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + V+ M +G P+ Y+I++ G L LLD M R G +
Sbjct: 321 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 380
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ K A+ M++ G P V+ ++T++ L + G ++ Y F++M
Sbjct: 381 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMV 440
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P+++ +T +I + GE +K ++L MI +G P+ N+++ C G+
Sbjct: 441 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 500
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + G PN + YNTL+ GK+ E+ + MV G
Sbjct: 501 EAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIG 548
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 115/232 (49%), Gaps = 3/232 (1%)
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG---FSP 113
G R ++ V+++M + GY PD+ +YN ++ K + LL M G SP
Sbjct: 142 GKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSP 201
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ +Y+ ++ K + A L + M GF P V+ +++L+DGL +A ++ +
Sbjct: 202 NVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAIL 261
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M +KG MP+ Y +MI Y + G+LE+A L M G P+V TY +I+ +C
Sbjct: 262 QHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKI 321
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ EA ++ M +G PN +Y+ L+ G L + +++ M+ G
Sbjct: 322 GRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 373
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 15/174 (8%)
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY-------FFDEMA 177
LG+ D ALNL + + SV F +++ ++RA + + ++ F+ MA
Sbjct: 28 LGRED----ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMA 83
Query: 178 NKGC---MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
G + ++I + G L+ A F + G T N +I+G C
Sbjct: 84 RSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGK 143
Query: 235 KFDEACTMM-KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ D+A M+ + M G P+ YN L+ L K EA E++ HM G Y
Sbjct: 144 RTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGY 197
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 118/219 (53%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M +G +PD ++Y ++ A +LG++D ++M G +PD ++ L++ L
Sbjct: 400 IFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLC 459
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK L M VG P+++ F T++ L + G + + D + G PDV+
Sbjct: 460 TVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVI 519
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + AG +++A L +GM++ G P+ F+YN+++ G+C AG+ D A + ++M
Sbjct: 520 SYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKM 579
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S G P + YNT++ L + +EA E+ +M+ G
Sbjct: 580 LSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNI + G+ K ++ F K + P SY A++ AL + +
Sbjct: 369 MVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E + QM +EG PDI+ ++ ++ + K ++ L EM G P+ +N
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L L K + + L++ ++ +G P V+ + TL+DG AG +D + M + G
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD Y ++ Y AG ++ A F M++ G P V TYN+++ G +F EA
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M + G + YN +++ L + + EA ++ +++ KG +++++
Sbjct: 609 ELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIIT 660
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 132/281 (46%), Gaps = 6/281 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T+ +I C A V ++ I + + +P ++YN ++H L
Sbjct: 229 MMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV---KPNIDTYNCLIHGYLS 285
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I ++K + + ++MS G P+ TY ++ + G+ + D M G P T
Sbjct: 286 IGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTT 345
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I+LH +LLN M G P+ F ++ G +D F++M
Sbjct: 346 YGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMR 405
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD V Y +I + G ++ A+ F+ MI +G P++ ++S++ G C K++
Sbjct: 406 QQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWE 465
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ + EM + G +PN + +NT++ NL G++ E ++
Sbjct: 466 KVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLV 506
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 119/249 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y ++ L + + E V+QQM D G P+I TYN ++ +GK + R+
Sbjct: 236 PDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRM 295
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+EM G P+ TY LL+ L K + A + M G PSV + ++ G +
Sbjct: 296 LEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYAT 355
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L + M G P+ + + ++Y G ++KA D+F+ M +G P+ +
Sbjct: 356 KGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVS 415
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C G+ D+A +M + G P+ +V+++LV L K + E+ M+
Sbjct: 416 YGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML 475
Query: 283 EKGKYIHLV 291
G + ++V
Sbjct: 476 NVGIHPNIV 484
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 102/202 (50%), Gaps = 5/202 (2%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE--- 143
+C R+G + LL M G PD +YNILL L + AL LL+ M +
Sbjct: 139 LCDGKRVG--EAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQV 196
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P+V+ ++T+++G G +D F EM ++G PDVV YT +I A ++
Sbjct: 197 WSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDR 256
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+ +F MI G PN+ TYN +I G+ GK+ E M++EM + G PN Y +L++
Sbjct: 257 AEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLN 316
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L G+ EA M+ KG
Sbjct: 317 YLCKNGRCREARFFFDSMIGKG 338
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 122/245 (49%), Gaps = 12/245 (4%)
Query: 49 NAILHALL-GIRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGK-LDQFHRLL 103
N +L+ L G R + ++ + Q+M + G PD ++YNI++ C + R + L+ H +
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192
Query: 104 DEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
D+ S P+ +Y+ +++ G+ DKP NL M + G P V+ +TT++DGL
Sbjct: 193 DDQVWS-CPPNVVSYSTVINGFFTEGQVDKPY---NLFLEMMDRGIPPDVVTYTTVIDGL 248
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+A D + F +M + G P++ Y +I Y++ G+ ++ + + M G PN
Sbjct: 249 CKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNC 308
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY S++ C G+ EA M +G P+ Y ++ G L+E H+++
Sbjct: 309 CTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNL 368
Query: 281 MVEKG 285
MV G
Sbjct: 369 MVANG 373
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 14/279 (5%)
Query: 13 FNILICTCGEVGLARKVVE--RFIKS-KLFNFRPFKNSYNAIL--HALLGI--RQYKLIE 65
FN ++C + G +V+E R + S + RP SYN ++ H L G KL+E
Sbjct: 486 FNTILCNLCKEG---RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLE 542
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
M G PD +YN ++ + G++D + +M +G +P TYN +LH L
Sbjct: 543 G----MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGL 598
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + A L +M G + + +++GL ++ +D F + +KG ++
Sbjct: 599 FQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNI 658
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ + +MI + + G E A DLF + G + NV TY ++ G +E ++
Sbjct: 659 ITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSA 718
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
ME G PN + N LV L + G ++ A + + E+
Sbjct: 719 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 757
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 126/289 (43%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI G F+ L+ V KV E F + P +N IL L ++
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNL--CKE 496
Query: 61 YKLIEWVYQQMSDE----GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+++E Q++ D G PD+++YN ++ G +D+ +LL+ M G PD
Sbjct: 497 GRVMEG--QRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSF 554
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+YN LLH K + +A + M G P V+ + T++ GL + K + M
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
N G D+ Y +++ + +++A +F + +KG N+ T+N MI G+
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++A + + + G N + Y +V NL G L E + M + G
Sbjct: 675 EDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNG 723
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 111/246 (45%), Gaps = 3/246 (1%)
Query: 43 PFKNSYNAILHALLG-IRQYKLIEWVYQQMSDEGYA--PDILTYNIVMCAKYRLGKLDQF 99
P SYN +L L R + +E ++ D+ ++ P++++Y+ V+ + G++D+
Sbjct: 163 PDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKP 222
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+ L EM G PD TY ++ L K A + M + G P++ + L+ G
Sbjct: 223 YNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHG 282
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
G +EM+ G P+ Y ++ G +A+ FD MI KG P+
Sbjct: 283 YLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPS 342
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY M+ G+ G E ++ M + G +PN ++N S G + +A ++
Sbjct: 343 VTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFN 402
Query: 280 HMVEKG 285
M ++G
Sbjct: 403 KMRQQG 408
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 10/257 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++N LI C G + A K++E + L +P SYN +LH + +
Sbjct: 520 SYNTLIDGHCLAGTIDEASKLLEGMVSVGL---KPDSFSYNTLLHGYCKAGRIDSAYSHF 576
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G P ++TYN ++ ++ + + L M SG D +TYNI+L+ L K
Sbjct: 577 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKS 636
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ + ++ G +++ F ++ L + G + F + G + +VV Y
Sbjct: 637 NCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTY 696
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++ + I G LE+ LF M G PN N+++R G A + +++
Sbjct: 697 RLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 756
Query: 249 RGCNPNFLVYNTLVSNL 265
R NF V + S L
Sbjct: 757 R----NFSVEASTTSML 769
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 133/318 (41%), Gaps = 38/318 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
MI +G T+NI++ C V A K+ + L N F N ++ ALL
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITF----NIMIGALL 669
Query: 57 -GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
G R+ ++ ++ + G +++TY +V+ G L++F L M ++G +P+
Sbjct: 670 KGGRKEDAMD-LFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNS 728
Query: 116 HTYNILLH-VLGKGDKPLAALNL---------------------------LNHMKEVGFD 147
N L+ +L +GD A L +H K +
Sbjct: 729 QMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKK 788
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
+L+ + +A +D F EM KG PDVV Y ++ G +A++L
Sbjct: 789 YRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 848
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+ MI N++TYN ++ G C + DEA M + + S+G N + +N ++ L
Sbjct: 849 YLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLK 908
Query: 268 AGKLAEAHEVIRHMVEKG 285
G+ +A ++ + G
Sbjct: 909 GGRKEDAMDLFAAIPANG 926
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 99/223 (44%), Gaps = 4/223 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M +G PD++TYN ++ ++ G+ + L M S + +TYNI+L+ L
Sbjct: 813 LFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLC 872
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A + + G +++ F ++ L + G + F + G +PDVV
Sbjct: 873 KSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVV 932
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ + I G LE+ LF M G + N+++R G A + ++
Sbjct: 933 TYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKL 992
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+ + NF + + S L + E + + EK + ++
Sbjct: 993 DEK----NFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLLN 1031
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/358 (19%), Positives = 139/358 (38%), Gaps = 69/358 (19%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G + ++N L+ C G + A + + + + P +YN ILH L
Sbjct: 544 MVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGI---TPGVVTYNTILHGLFQ 600
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + +Y M + G DI TYNI++ + +D+ ++ + G + T
Sbjct: 601 TKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIIT 660
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGF----------------DPSVLHFTTLMDGLS 161
+NI++ L KG + A++L + G + S+ F +L +
Sbjct: 661 FNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME 720
Query: 162 RAG---NLDACKYFFDEMANKGCMPDVVCY---------------TVMITSYIAAGE--- 200
+ G N + ++G + Y T M+ S ++ E
Sbjct: 721 KNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQH 780
Query: 201 --------------------------LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ A LF M+ KG P+V TYN+++ G G
Sbjct: 781 HAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTG 840
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+F EA + M + N YN +++ L + + EA ++ + + KG +++++
Sbjct: 841 RFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 898
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/309 (18%), Positives = 115/309 (37%), Gaps = 28/309 (9%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TFNI+I + G ++ F +Y ++ L+ +
Sbjct: 653 GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEF 712
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ M G AP+ N ++ G + + L ++ FS + T ++L+ +
Sbjct: 713 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772
Query: 125 ----------------------------LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+ K + A +L M G P V+ + T+
Sbjct: 773 FSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTI 832
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ GL + G K + M N ++ Y +++ + +++A +F + +KG
Sbjct: 833 LHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGL 892
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
N+ T+N MI G+ ++A + + + G P+ + Y + NL G L E
Sbjct: 893 QLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDG 952
Query: 277 VIRHMVEKG 285
+ M + G
Sbjct: 953 LFLTMEKSG 961
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN ILH L ++ + +Y M + +I TYNI++ + +D+ ++
Sbjct: 824 PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ G + T+NI++ L KG + A++L + G P V+ + + + L
Sbjct: 884 FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G+L+ F M G D ++ + G++ +A
Sbjct: 944 EGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 38/314 (12%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P T T +C+ G++ A +V+ I S RP Y ++ L ++
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIAS---GCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++M ++G APDI YN ++ + ++D+ L EM +G P+ TY +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVL----------------------------------- 151
+ + +A + M+E G P+ +
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+T LM+GL + +D + F EM KG PDV Y V+I + G ++KA +FD M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +G PNV YN ++ GFC +G+ ++A ++ EM +G +PN + Y T++ +G L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 272 AEAHEVIRHMVEKG 285
AEA + M KG
Sbjct: 714 AEAFRLFDEMKLKG 727
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ENG A T+ I E A K V+ + + P K +++
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL---PNKVLCTGLINEY-- 567
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ K+IE Y+ M D+G D TY ++M ++ K+D + EM G +PD
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+Y +L++ K A ++ + M E G P+V+ + L+ G R+G ++ K DE
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ KG P+ V Y +I Y +G+L +A LFD M KG +P+ F Y +++ G C
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ A T+ +GC + +N L++ + GK EV+ +++
Sbjct: 748 VERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF-------NFRPFKNSYNAILH 53
M E G +N LI +GL++ +R +++ F +P +Y A +
Sbjct: 478 MKEQGIAPDIFCYNSLI-----IGLSK--AKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ ++ + ++M + G P+ + ++ + GK+ + M G
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TY +L++ L K DK A + M+ G P V + L++G S+ GN+ F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DEM +G P+V+ Y +++ + +GE+EKA++L D M KG PN TY ++I G+C +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G EA + EM+ +G P+ VY TLV
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E +T+++LI C G V L + V+ F+ K A L+
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL----------FKTEKEFRTATLNVDGA 261
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + M +G P TY++++ ++ +L+ LL EM G S D HT
Sbjct: 262 LK-------LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHT 314
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L+ L KG AA L++ M G + + + +S+ G ++ K FD M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +P Y +I Y + + +L M + + + +TY ++++G C +G D
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++KEM + GC PN ++Y TL+ + +A V++ M E+G
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 120/289 (41%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL---G 57
M+ +G ++ IC + G+ K F P +Y +++
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 58 IRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+RQ Y+L+ +M TY V+ G LD + ++ EM SG P+
Sbjct: 398 VRQGYELL----VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y L+ + + A+ +L MKE G P + + +L+ GLS+A +D + F EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P+ Y I+ YI A E A M G LPN +I +C GK
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC+ + M +G + Y L++ L K+ +A E+ R M KG
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 38/277 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y +++ L + E ++++M +G APD+ +Y +++ +LG + + + DEM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P+ YN+LL + + A LL+ M G P+ + + T++DG ++G+L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF------------------ 208
FDEM KG +PD YT ++ ++E+A +F
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 209 --------------------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
DG + PN TYN MI C G + A + +M++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + Y +L++ G+ AE V + G
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y+ ++ LL R + + +M G Y+ +C + G +++ L D
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M SG P Y L+ + LL MK+ S + T++ G+ +G+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD EM GC P+VV YT +I +++ A + M +G P++F YNS
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G A + DEA + + EM G PN Y +S A + A A + ++ M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 130/323 (40%), Gaps = 40/323 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G A+T+ +L+ + E F + + P SY +++ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M +EG P+++ YN+++ R G++++ LLDEM G P+ TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K A L + MK G P +TTL+DG R +++ F KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKG 761
Query: 181 CM---------------------------------------PDVVCYTVMITSYIAAGEL 201
C P+ V Y +MI G L
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A++LF M +P V TY S++ G+ G+ E + E + G P+ ++Y+ +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 262 VSNLRNAGKLAEAHEVIRHMVEK 284
++ G +A ++ M K
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAK 904
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS----PDFHTYNILLHVLGKGD 129
+G A +N ++ ++ GK + +L+ + F P+ TYNI++ L K
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
AA L + M+ P+V+ +T+L++G + G FDE G PD + Y+
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPN-----VFTYNSMIRGFCMAGKFDEACTMMK 244
V+I +++ G KA L D M K + + + T +++ GF G+ + A +M+
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Query: 245 EM 246
M
Sbjct: 940 NM 941
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGY----APDILTYNIVMCAKYRLGKLDQFHRLL 103
+NA+++ + + +L V ++ D + P+ +TYNI++ + G L+ L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M + P TY LL+ K + + + G +P + ++ +++ +
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 164 GNLDACKYFFDEM-----ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G D+M + GC + +++ + GE+E A+ + + M+ +P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 219 NVFTYNSMIRGFCMA 233
+ T +I C++
Sbjct: 949 DSATVIELINESCIS 963
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 135/279 (48%), Gaps = 2/279 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F LI G+ L K +E F + FN FR + S+N +L+ L+ Q+ ++QQ
Sbjct: 119 FVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQ-SFNVLLNTLVDCDQFSKASEIFQQA 177
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G+ P+ ++YNI++ + G +Q L DEM G P TYN L VL + +
Sbjct: 178 YEMGFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEM 237
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L +M E G P+ + + LM+G G K +M GC V Y V+
Sbjct: 238 DTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVL 297
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+T G +++ + L + M + P+V TYN ++ C GK +A ++ +M+ GC
Sbjct: 298 MTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGC 357
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+PN Y ++ NAG A +++ M+ G Y HL
Sbjct: 358 DPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHL 396
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 91/191 (47%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L + GF + +Y+ L++ L + + A +L H++ + F L+
Sbjct: 68 LFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYG 127
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A ++ F +M + C + + V++ + + + KA ++F G PN
Sbjct: 128 KAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSV 187
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+YN MI+G+ G +++AC + EM +G P+ + YN+ + L G++ A + ++M
Sbjct: 188 SYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNM 247
Query: 282 VEKGKYIHLVS 292
EKG + + V+
Sbjct: 248 TEKGHHPNAVT 258
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ ++G+ +Y+ ++ R + + +L + + + L+ G
Sbjct: 68 LFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYG 127
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L + M ++ F L++ L F + G P+ V
Sbjct: 128 KAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMGFRPNSV 187
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +MI +I G E+A +LFD M+ KG P+V TYNS + C G+ D A + K M
Sbjct: 188 SYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNM 247
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+G +PN + Y L+ GK EA +++ M
Sbjct: 248 TEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDM 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 42/253 (16%)
Query: 1 MIENGFPTTARTFNI---LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G + T+N ++C GE+ A + + + P +Y ++
Sbjct: 212 MLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEK---GHHPNAVTYALLMEGWCF 268
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I +YK + + M G + Y ++M + G +D+ LL+EM + PD T
Sbjct: 269 IGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVT 328
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL++ L K K A +L M+ G DP+ + ++DG AG+ D
Sbjct: 329 YNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDG--------- 379
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
A + + M+ G P++ T+ S++ G D
Sbjct: 380 --------------------------AMKILNAMLMSGHYPHLKTFASLVVGLLKGENND 413
Query: 238 E-ACTMMKEMESR 249
+ C +++EME R
Sbjct: 414 DYVCFVLEEMEKR 426
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 67/155 (43%)
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P AL L + E GF +++L+ L+R+ +A + + N+ + +
Sbjct: 62 PCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVA 121
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I Y A +EK +LF M + + ++N ++ +F +A + ++ G
Sbjct: 122 LIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMG 181
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + YN ++ G +A + M+EKG
Sbjct: 182 FRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKG 216
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 132/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI GL + E +P +YNAI++ L +
Sbjct: 384 MEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGK 443
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y + V +M G +PD TYNI++ R + R+ DEM G PD +++
Sbjct: 444 YLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +L K AL MK G P + +T L+ G R G + DEM +G
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C DVV Y ++ L +A +LF M +G P+ +T+ ++I G+ G ++A
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
T+ + M R P+ + YNTL+ ++ + +E+ M+ + Y + +S
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 675
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 135/267 (50%), Gaps = 3/267 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G V LA ++ + ++S + + + N +++AL ++ + + M ++G PD+
Sbjct: 337 GWVDLAWEIYQEVVRSGV---QVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 393
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ A R G L++ L+D M G P TYN +++ L K K L A +L+
Sbjct: 394 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 453
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M ++G P + L+ R N+ + FDEM ++G +PD+V ++ +I G
Sbjct: 454 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGC 513
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A F M G P+ Y +I GFC G EA + EM +GC + + YNT
Sbjct: 514 LDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNT 573
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+++ L L+EA E+ M E+G +
Sbjct: 574 ILNGLCKEKMLSEADELFTEMTERGVF 600
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 107/218 (49%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ M + G APD + Y I++ R G + + ++ DEM G D TYN +L+ L K
Sbjct: 521 FRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCK 580
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A L M E G P FTTL++G + GN++ F+ M + PDVV
Sbjct: 581 EKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVT 640
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I + E+EK +L++ MI++ PN +Y +I G+C G EA + EM
Sbjct: 641 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMV 700
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + NT+V AG +A E + +M+ KG
Sbjct: 701 EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKG 738
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN IL+ L + + ++ +M++ G PD T+ ++ + G +++ L + M
Sbjct: 570 TYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ PD TYN L+ KG + L N M P+ + + L++G G +
Sbjct: 630 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 689
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+DEM KG ++ ++ Y AG KA + M+ KG +P+ TYN++
Sbjct: 690 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 749
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I GF D A ++ +ME+ G P+ + YN +++ G++ EA ++ M+E+G
Sbjct: 750 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 808
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +M ++G D++TYN ++ + L + L EM G PDF+T+ L++
Sbjct: 555 VRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYX 614
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L M + P V+ + TL+DG + ++ +++M ++ P+ +
Sbjct: 615 KDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI 674
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I Y G + +A L+D M+ KG + T N++++G+C AG +A + M
Sbjct: 675 SYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 734
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ + YNTL++ + A ++ M G
Sbjct: 735 LLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 112/254 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TF LI + G K V F N +P +YN ++ +
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ M P+ ++Y I++ +G + + RL DEM GF T N
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + + A L++M G P + + TL++G + N+D ++M N G
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSG 773
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PDV+ Y V++ + G +++A+ + MI +G P+ TY S+I G EA
Sbjct: 774 LLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAF 833
Query: 241 TMMKEMESRGCNPN 254
+ EM RG P+
Sbjct: 834 RVHDEMLQRGFVPD 847
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 123/287 (42%), Gaps = 30/287 (10%)
Query: 31 ERFIKSKLFNFRPFKNS---YNAILHALL-------------------GIRQYKLIEWVY 68
+RFI S N FK+S ++A++H L+ G+ + +++E +
Sbjct: 219 QRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLV 278
Query: 69 QQMSDEGYAP---DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ G P D+L V K R G + F L + G + N LL L
Sbjct: 279 LTYGNCGSNPLVFDLLVRTYVQARKLREG-CEAFRVLKSK----GLCVSINACNSLLGGL 333
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K A + + G +V +++ L + ++ K F +M KG PDV
Sbjct: 334 VKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDV 393
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I +Y G LE+A +L D M KG P VFTYN++I G C GK+ A ++ E
Sbjct: 394 VTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDE 453
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M G +P+ YN L+ + +A + M +G LVS
Sbjct: 454 MLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 500
>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
Length = 635
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 42/322 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T TFN LI GE ++K++Z + S+ N RP +YN ++ A
Sbjct: 168 MKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZ--LMSQDENVRPNLRTYNVLVRAWCN 225
Query: 58 IRQYKLIEW-VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + W V +M G PD +TYN + A + G+ Q ++ EM S P+
Sbjct: 226 -KXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQPNER 284
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS--------------------------- 149
T I++ K K AL + MK++G P+
Sbjct: 285 TCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVLTLM 344
Query: 150 --------VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
V+ F+T+M+ S AG +D C+ FD+M PD Y+++ Y+ AGE
Sbjct: 345 EEFGVKPDVITFSTIMNAWSAAGFMDKCREIFDDMVKARIQPDAHVYSILAKGYVRAGEP 404
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
EKA+++ + MI G PNV + ++I G+C AG+ + A + ++M G PN + TL
Sbjct: 405 EKAEEILNAMIKSGFHPNVVMFTTIINGWCSAGRMEYAIKIFEKMCECGIAPNLKTFETL 464
Query: 262 VSNLRNAGKLAEAHEVIRHMVE 283
+ A + ++ EV++ M E
Sbjct: 465 IWGYGEARQPWKSEEVLQIMEE 486
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 1/189 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+ + +LD + G P TY LL L + ++++ ++E G +P + F
Sbjct: 86 GRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFF 145
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+++ S +GN+ +F +M G P + +I Y AGE E++Q L + M
Sbjct: 146 NAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQ 205
Query: 214 KGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ PN+ TYN ++R +C +A ++ +M + G P+ + YNT+ + G+ +
Sbjct: 206 DENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEAS 265
Query: 273 EAHEVIRHM 281
+A +I M
Sbjct: 266 QAEGIILEM 274
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 36/247 (14%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ P ++TY ++ A D H ++ ++ +G PD +N +++ + A
Sbjct: 102 GHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEA 161
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD-------------------- 174
+ MKE G P+ F TL+ G AG + + +
Sbjct: 162 MKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQDENVRPNLRTYNVLVR 221
Query: 175 ----------------EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+M G PD V Y + T+Y GE +A+ + M P
Sbjct: 222 AWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIATAYAQNGEASQAEGIILEMQNSNVQP 281
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N T +I G+C GK EA + M+ G PN +V+N+L+ +A +EV+
Sbjct: 282 NERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQPNLVVFNSLIKGFIDAVDRDGVNEVL 341
Query: 279 RHMVEKG 285
M E G
Sbjct: 342 TLMEEFG 348
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++++ + +P ++L+ + E G PS++ +TTL+ L+ + D+ ++ G
Sbjct: 78 LMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEENG 137
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + + +I ++ +G +++A F M G P T+N++I+G+ +AG+ +E+
Sbjct: 138 MEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQ 197
Query: 241 TMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M + PN YN LV N + +A V+ MV G
Sbjct: 198 KLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASG 243
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 180 GCMPDVVCYTV-----MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
C+ C TV ++ I G ++ Q + D +I G P++ TY +++ +
Sbjct: 62 SCLSKTSCRTVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQK 121
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
FD +++ ++E G P+ + +N +++ +G + EA + M E G
Sbjct: 122 HFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESG 172
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 1/162 (0%)
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
LH + + P + + ++ + + +V T LM+ + G + D + G
Sbjct: 45 LHPVSQSADPQSQVRCISCLSKTSCR-TVRSRTKLMNIMIEKGRPQEVQSILDSIIEGGH 103
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P +V YT ++ + + + + G P+ +N++I F +G EA
Sbjct: 104 KPSLVTYTTLLAALTIQKHFDSIHSIISQVEENGMEPDSIFFNAVINAFSESGNMQEAMK 163
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+M+ G P +NTL+ AG+ E+ +++ M +
Sbjct: 164 YFWKMKESGSKPTTSTFNTLIKGYGIAGEPEESQKLLZLMSQ 205
>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 867
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 121/243 (49%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+I+HAL R E V +QM D PD +TY ++ LG+ + ++
Sbjct: 305 PNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKM 364
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
EM R G PD T+N L+ L K + A + + + G P ++ ++ L+ G +
Sbjct: 365 FKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYAT 424
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G F M + G + D C+ ++I ++ G +++A +F M +G PNV T
Sbjct: 425 EGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVT 484
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C G+ +A + +M S G PN +VY++L+ G L +A E++ M+
Sbjct: 485 YATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMM 544
Query: 283 EKG 285
++G
Sbjct: 545 DQG 547
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 149/320 (46%), Gaps = 36/320 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +N T+ +I +G ++ + F + P ++N+++ +L ++
Sbjct: 333 MFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKR 392
Query: 61 YKLIEWVYQQMSDEGYAPDILTY-----------------------------------NI 85
K ++ ++ +G+ PDI++Y NI
Sbjct: 393 SKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNI 452
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + G +D+ + EM G SP+ TY ++ L + + A+ L+ M +G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC-MPDVVCYTVMITSYIAAGELEKA 204
P+ + + +L+ G G+L K EM ++G P++ ++ +I S G + A
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
QD+F+ +I G P++FT+NS+I G+C+ GK D+A ++ M S G P+ + Y+TL++
Sbjct: 573 QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632
Query: 265 LRNAGKLAEAHEVIRHMVEK 284
+G++ + + R M+ K
Sbjct: 633 YFKSGRIDDGLILFREMLCK 652
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 36/279 (12%)
Query: 43 PFKNSYNAILHALLG-IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P SYN ++ +L G R + ++ + + +G +PD+++Y +V+ + G++ +
Sbjct: 234 PDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACN 293
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L +EM + G P+ TYN ++H L K A +L M + P + +T ++ G S
Sbjct: 294 LFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYS 353
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G F EM +G +PD+V + ++ S ++A ++F + TKG P++
Sbjct: 354 CLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDII 413
Query: 222 TYNSMIRGFCMAGKF-----------------------------------DEACTMMKEM 246
+Y+ ++ G+ G+F DEA + EM
Sbjct: 414 SYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEM 473
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G +PN + Y T+++ L G+LA+A E + M+ G
Sbjct: 474 RGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 141/326 (43%), Gaps = 36/326 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G TFN L+ + + +++ E F +P SY+ +LH +
Sbjct: 368 MTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGR 427
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ M+D G D +NI++ A + G +D+ + EM G SP+ TY
Sbjct: 428 FVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYAT 487
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + + A+ L+ M +G P+ + + +L+ G G+L K EM ++G
Sbjct: 488 VIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQG 547
Query: 181 C------------------------------------MPDVVCYTVMITSYIAAGELEKA 204
PD+ + +I Y G+++KA
Sbjct: 548 IPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKA 607
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ D M++ G P+V TY+++I G+ +G+ D+ + +EM + P + Y+ ++
Sbjct: 608 FGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDG 667
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHL 290
L AG+ + A ++ M+E G + +
Sbjct: 668 LFRAGRTSAAKKMFHEMIESGTAMSI 693
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 10/285 (3%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P T T+ IL+ C L R +++ L N++ L R +
Sbjct: 162 PLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCL--CYAKRTDEA 219
Query: 64 IEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +MS+ G PD +YN V +C R + LL G SPD +Y +
Sbjct: 220 LSMLLHRMSELGCVPDAFSYNTVIKSLCGGSR--SQEALDMLLRMTKGDGCSPDVVSYTM 277
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H L + A NL N M + G P+V+ + +++ L +A +D + +M +
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V YT MI Y G ++A +F M +G +P++ T+NS++ C + EA
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + ++G P+ + Y+ L+ G+ + + + M + G
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNG 442
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD-ILTYNIVMCAKYRLGKLDQFHRLLD 104
++Y ++ R+ L + ++ G D I+T + C Y + LL
Sbjct: 166 HTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLH 225
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRA 163
M G PD +YN ++ L G + AL++L M K G P V+ +T ++ GL
Sbjct: 226 RMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFME 285
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + F+EM KG +P+VV Y ++ + A ++KA+ + M P+ TY
Sbjct: 286 GEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTY 345
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+MI G+ G++ EA M KEM G P+ + +N+L+ +L + EA E+ +
Sbjct: 346 TAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIAT 405
Query: 284 KGKYIHLVS 292
KG ++S
Sbjct: 406 KGHKPDIIS 414
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 120/278 (43%), Gaps = 7/278 (2%)
Query: 1 MIENGFPTTARTF--NIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
M++ G P TF +I+ +C G V A+ V I RP ++N+++
Sbjct: 543 MMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIH---IGDRPDIFTFNSLIDGYC 599
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + V M G PD++TY+ ++ ++ G++D L EM P
Sbjct: 600 LVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTV 659
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+++L L + + AA + + M E G S+ +T ++ GL R D F ++
Sbjct: 660 TYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKL 719
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++ MI + E+A DLF + G +PN TY MI G
Sbjct: 720 GAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSV 779
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+EA M ME GC P+ + N ++ L G++ +A
Sbjct: 780 EEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKA 817
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 127/288 (44%), Gaps = 5/288 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++ LI CT G++ A+++V + + RP +++I+H+L
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIP--RPNITFFSSIIHSLCN 565
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V+ + G PDI T+N ++ +GK+D+ +LD M +G PD T
Sbjct: 566 EGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVT 625
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L++ K + L L M P+ + ++ ++DGL RAG A K F EM
Sbjct: 626 YSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMI 685
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + YT+++ ++A LF + + N+MI + +
Sbjct: 686 ESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRRE 745
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + + G PN Y ++ NL G + EA + M + G
Sbjct: 746 EAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTG 793
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 42/324 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +NG + FNILI + G+ + + F + + P +Y ++ AL + +
Sbjct: 438 MTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGR 497
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS-------- 112
QM G P+ + Y+ ++ G L + L+ EM G
Sbjct: 498 LADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFS 557
Query: 113 ----------------------------PDFHTYNILLH---VLGKGDKPLAALNLLNHM 141
PD T+N L+ ++GK DK A +L+ M
Sbjct: 558 SIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDK---AFGVLDAM 614
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G +P V+ ++TL++G ++G +D F EM K P V Y++++ AG
Sbjct: 615 VSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRT 674
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
A+ +F MI G ++ TY +++G C DEA T+ ++ + + NT+
Sbjct: 675 SAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTM 734
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ L + EAH++ + G
Sbjct: 735 IHALYKVKRREEAHDLFASVSASG 758
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 114/265 (43%), Gaps = 6/265 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C G++ A V++ + + P +Y+ +++ + ++
Sbjct: 590 TFNSLIDGYCLVGKMDKAFGVLDAMVSA---GTEPDVVTYSTLINGYFKSGRIDDGLILF 646
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M + P +TY++V+ +R G+ ++ EM SG + TY I+L L +
Sbjct: 647 REMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRN 706
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ L + + + + T++ L + + F ++ G +P+ Y
Sbjct: 707 NCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTY 766
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
VMI + + G +E+A +F M G P+ N +IR G+ +A M +++
Sbjct: 767 GVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAGYYMSKVDG 826
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAE 273
+ + L+S + G+ E
Sbjct: 827 TIISLEASTTSLLISLFASKGRYRE 851
>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
Length = 1263
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 136/273 (49%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LIC + L F + K P + +YN +L A+ + + + V ++M
Sbjct: 883 YNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMH 942
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+GY +TYN ++ + +L+Q L + GFSP TY LL L K +
Sbjct: 943 RKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIE 1002
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A NL N M E G + + L++G AGN + + F +M ++G PD+ YT++I
Sbjct: 1003 DAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIII 1062
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ AG+L F ++ G P++ TYN +I G + + +EA ++ EM+ +G
Sbjct: 1063 DTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIV 1122
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN YN+L+ +L AGK AEA ++ ++ KG
Sbjct: 1123 PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKG 1155
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 135/260 (51%), Gaps = 3/260 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A ++V++F K F YN+++ L+ + E ++ +M + G PD TYN+
Sbjct: 864 AHELVKKF---KSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNL 920
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + ++++ ++ +EM R G+ + TYN ++ L K + A++L ++ G
Sbjct: 921 LLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQG 980
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F P+ + L+DGL +AG ++ + F+EM GC + Y +++ + AG EK
Sbjct: 981 FSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVC 1040
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF M+ +G P++ +Y +I C AG+ ++ T +++ G P+ + YN L+ L
Sbjct: 1041 HLFQDMVDQGINPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGL 1100
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ +L EA + M +KG
Sbjct: 1101 GKSKRLEEAVSLFNEMQKKG 1120
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + ++ + F P +Y +L LL +
Sbjct: 941 MHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGR 1000
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ +M + G + YNI++ G ++ L +M G +PD +Y I
Sbjct: 1001 IEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTI 1060
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + L + E+G +P ++ + L+DGL ++ L+ F+EM KG
Sbjct: 1061 IIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKG 1120
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P++ Y +I AG+ +A +++ ++TKG PNVFTYN++IRG+ ++G D A
Sbjct: 1121 IVPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAY 1180
Query: 241 TMMKEMESRGCNPN 254
M GC PN
Sbjct: 1181 AAYGRMIVGGCLPN 1194
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 122/242 (50%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+ L+ R+ + +Y + +G++P TY ++ + G+++ L +EM
Sbjct: 952 TYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEM 1011
Query: 107 GRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
G + YNILL+ + G +K +L M + G +P + +T ++D L +A
Sbjct: 1012 LEYGCKANCTIYNILLNGHRIAGNTEK---VCHLFQDMVDQGINPDIKSYTIIIDTLCKA 1068
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G L+ +F ++ G PD++ Y ++I + LE+A LF+ M KG +PN++TY
Sbjct: 1069 GQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTY 1128
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
NS+I AGK EA M +E+ ++G PN YN L+ +G A+ M+
Sbjct: 1129 NSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIV 1188
Query: 284 KG 285
G
Sbjct: 1189 GG 1190
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G A T+N L+ + G R+ +E + + P +Y+ ++ A R
Sbjct: 276 MKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRD 335
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + W+ ++M G P++ +Y I + + + D+ +R+L +M G PD T+ +
Sbjct: 336 VETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTV 395
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ VL + A ++ MK+ P + + TL+D G+ + ++ M G
Sbjct: 396 LIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+VV YT +I + G + +A ++FD M KG +P ++YNS+I GF A +F +A
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K M+ G PN + ++ +G+ +A + M KG
Sbjct: 516 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKG 560
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 133/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G + RT+++L+ G+ V+ + + +P SY + L ++
Sbjct: 311 MMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKR 370
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M +EG PD++T+ +++ G++ + +M +S PD TY
Sbjct: 371 FDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYIT 430
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G + + + N MK G++ +V+ +T ++D L + G + FDEM KG
Sbjct: 431 LLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKG 490
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+ Y +I+ ++ A A +LF M G PN +T+ I + +G+ +A
Sbjct: 491 IVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAI 550
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+G P+ + N ++ L +G+L A V + G
Sbjct: 551 QRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 595
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-RQYKLIEWVYQQ 70
T+ L+ G+ G ++ V+E + K + +Y A++ AL + R ++ +E ++ +
Sbjct: 427 TYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALE-MFDE 485
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M +G P+ +YN ++ + + L M G P+ +T+ + ++ GK +
Sbjct: 486 MKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGE 545
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ A+ MK G P V+ ++ GL+++G L K F E+ G PD + YT+
Sbjct: 546 SIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTM 605
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI A + ++A +F MI +P+V NS+I AG+ DEA + +++
Sbjct: 606 MIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMN 665
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P YNTL++ L GK+ E ++ M
Sbjct: 666 LEPTDGTYNTLLAGLGREGKVKEVMHLLEEM 696
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 3/268 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G + A+ V F K K + +P + +Y +L + + ++ M +G
Sbjct: 399 VLCDAGRISDAKDV---FWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADG 455
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y +++ Y V+ A ++G++ + + DEM + G P+ ++YN L+ K D+ AL
Sbjct: 456 YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDAL 515
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L HM G P+ ++ ++G ++ M +KG +PDVV ++
Sbjct: 516 ELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGL 575
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G L A+ +F + G P+ TY MI+ A KFDEA + +M C P+
Sbjct: 576 AKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDV 635
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
L N+L+ L AG+ EA + + E
Sbjct: 636 LAVNSLIDTLYKAGRGDEAWRIFYQLKE 663
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 106/238 (44%), Gaps = 7/238 (2%)
Query: 44 FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
F N Y ++ I++Y+L M +G PD++ N V+ + G+L R+
Sbjct: 536 FINYYGKSGESIKAIQRYEL-------MKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVF 588
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
E+ G SPD TY +++ K K A+ + M E P VL +L+D L +A
Sbjct: 589 HELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKA 648
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G D F ++ P Y ++ G++++ L + M PN+ TY
Sbjct: 649 GRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITY 708
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N+++ C G ++A M+ M ++GC P+ YNT++ L + EA + M
Sbjct: 709 NTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQM 766
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 126/259 (48%), Gaps = 1/259 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ G + K ++R+ K P + NA+L L + + + V+ ++ G +PD
Sbjct: 541 GKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDT 600
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TY +++ + K D+ ++ +M + PD N L+ L K + A +
Sbjct: 601 ITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQ 660
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+KE+ +P+ + TL+ GL R G + + +EM + P+++ Y ++ G
Sbjct: 661 LKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGA 720
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A D+ M TKG +P++ +YN++I G +++EA ++ +M+ + P++ T
Sbjct: 721 VNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMK-KVLIPDYATLCT 779
Query: 261 LVSNLRNAGKLAEAHEVIR 279
++ + G + EA +I+
Sbjct: 780 ILPSFVKIGLMKEALHIIK 798
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G +NIL+ G KV F P SY I+ L Q
Sbjct: 1011 MLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDTLCKAGQ 1070
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++Q+ + G PD++TYN+++ + +L++ L +EM + G P+ +TYN
Sbjct: 1071 LNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPNLYTYNS 1130
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ LGK K A + + G+ P+V + L+ G S +G+ D+ + M G
Sbjct: 1131 LILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYAAYGRMIVGG 1190
Query: 181 CMPDVVCYTVMITSYIAAGELEK 203
C+P+ + +S A G + K
Sbjct: 1191 CLPNSSTDSSNCSSPEAVGTVRK 1213
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 124/320 (38%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIEN N LI T + G + F + K N P +YN +L L +
Sbjct: 626 MIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGK 685
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + ++M Y P+++TYN ++ + G ++ +L M G PD +YN
Sbjct: 686 VKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNT 745
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV------------------GFDPSVLHFT-------- 154
+++ L K ++ A ++ MK+V G LH
Sbjct: 746 VIYGLVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPG 805
Query: 155 ---------TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+LM+G+ + ++ F + +A+ G D +I + +A
Sbjct: 806 SKTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAH 865
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L + G YNS+I G D A + EM+ GC P+ YN L+ +
Sbjct: 866 ELVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAM 925
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ ++ E +V M KG
Sbjct: 926 GKSMRIEEMLKVQEEMHRKG 945
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%)
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M +G + +TYN L++ L K AL + M G PSV ++ LM +
Sbjct: 273 LPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGK 332
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+++ + EM G P+V YT+ I A ++A + M +G P+V T
Sbjct: 333 RRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVIT 392
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ +I+ C AG+ +A + +M+ P+ + Y TL+ + G E+ M
Sbjct: 393 HTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK 452
Query: 283 EKG 285
G
Sbjct: 453 ADG 455
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 35/215 (16%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ SG + D L+ L K K L A L+ K G + +L+ GL
Sbjct: 836 IASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNSLICGLVDENL 895
Query: 166 LDACKYFFDEMANKGCMPD-----------------------------------VVCYTV 190
+D + F EM GC PD V Y
Sbjct: 896 IDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKGYESTYVTYNT 955
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I+ + + LE+A DL+ ++++G P TY ++ G AG+ ++A + EM G
Sbjct: 956 IISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRIEDAENLFNEMLEYG 1015
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C N +YN L++ R AG + + + MV++G
Sbjct: 1016 CKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1050
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 59/133 (44%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F + GL G L + M G + + Y ++ + +G +A +++ M+
Sbjct: 253 FAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDREALEVYRVMM 312
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G +P+V TY+ ++ F + +++EME+ G PN Y + L A +
Sbjct: 313 VDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFD 372
Query: 273 EAHEVIRHMVEKG 285
EA+ ++ M +G
Sbjct: 373 EAYRILAKMENEG 385
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 119/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H +J + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A L D M KG P+ TY ++I
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ JA+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 VKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVT 424
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 269 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +A M + + +T L+ GL + G + EM + G PD
Sbjct: 329 KEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDAR 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 389 TYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 139/328 (42%), Gaps = 51/328 (15%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI + + GL + F + + P +Y A++HA L +Q
Sbjct: 318 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 377
Query: 65 EWVYQQMSDEG------------------------------------------------- 75
++ +M D G
Sbjct: 378 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 437
Query: 76 --YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
AP+++TY ++ + K+D H LLD M SG P+ Y+ L+ K K +
Sbjct: 438 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 497
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A + M + G+ PSV +T+L+D + + G LD +M C P+VV YT MI
Sbjct: 498 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 557
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
GE EKA L M KG PNV TY ++I G AGK D + + +M +GC+P
Sbjct: 558 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 617
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N++ Y L+++L AG L +A ++ M
Sbjct: 618 NYVTYRVLINHLCAAGLLDKARLLLGEM 645
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 110/244 (45%), Gaps = 51/244 (20%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+GK D+ +L+ EM R GF PD TY+ ++ L K A L MK VG P V
Sbjct: 266 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF---- 208
+T L+D +AG ++ ++ F+EM + GC P VV YT +I +Y+ A ++ +A D+F
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 385
Query: 209 ---------------DGMITKGQL--------------------------------PNVF 221
DG+ G + PNV
Sbjct: 386 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +++ G C A K D A ++ M S GC PN +VY+ L+ AGK+ A EV M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505
Query: 282 VEKG 285
+ G
Sbjct: 506 TKCG 509
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 51/336 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ GF T++ +I K F + K+ P +Y ++ +
Sbjct: 279 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 338
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----FHRLLDE----------- 105
+ +W++++M G +P ++TY ++ A + ++ Q FHR++D
Sbjct: 339 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 398
Query: 106 ------------------------------------MGRSGFSPDFHTYNILLHVLGKGD 129
R +P+ TY L+ L K
Sbjct: 399 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 458
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A LL+ M G +P+ + + L+DG +AG +D+ + F +M G +P V YT
Sbjct: 459 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 518
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G L+ A + M+ PNV TY +MI G C G+ ++A ++ ME +
Sbjct: 519 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 578
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC+PN + Y L+ L AGK+ + ++ M KG
Sbjct: 579 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 614
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 17/286 (5%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N C CG VG K + + F P ++Y+ ++ L + + ++Q+M
Sbjct: 258 NFARCLCG-VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G PD+ TY I++ + + G ++Q L +EM G SP TY L+H K +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC----------------KYFFDEMA 177
A ++ + M + G P+ + + L+DGL +AGN+ ++F
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P+VV Y ++ A +++ A +L D M++ G PN Y+++I GFC AGK D
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + +M G P+ Y +L+ + G+L A +V+ M++
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 137/332 (41%), Gaps = 49/332 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSK-------------LFNFRPF 44
M++ G T+ L+ C G + A +V + I + P
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A++ L + + M G P+ + Y+ ++ + GK+D +
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M + G+ P HTY L+ + K + A+ +L+ M + P+V+ +T ++DGL R G
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ M KGC P+VV YT +I AG+++ + DLF M KG PN TY
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623
Query: 225 SMIRGFCMAGKFDEA--------------------CT-------------MMKEMESRGC 251
+I C AG D+A C +++EMES G
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGT 683
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
P VY L+ AG+L A E+ + M+E
Sbjct: 684 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 139/326 (42%), Gaps = 47/326 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G ++ LI C G++ A++V F++ + P ++Y +++ +
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV---FLQMTKCGYLPSVHTYTSLIDRMFK 526
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L V QM + P+++TY ++ R+G+ ++ +LL M G SP+ T
Sbjct: 527 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 586
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF---- 173
Y L+ LGK K +L+L M G P+ + + L++ L AG LD +
Sbjct: 587 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646
Query: 174 -----------------------------DEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
+EM + G +P Y ++I + AG LE A
Sbjct: 647 QTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706
Query: 205 QDLFDGMITKGQLPNVFT-----YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L M+ ++P+ Y S+I+ C+A + +EA + EM RG P V+
Sbjct: 707 MELHKEMM---EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFV 763
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ L K EA ++ + +G
Sbjct: 764 CLIKGLVEVKKWDEALQLCYGICHEG 789
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 14/253 (5%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y +L L +Q + + M EG P+ +N ++ + ++L
Sbjct: 140 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 199
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD----------PSVLH 152
L+ M G P + YNI + + G + L + +LL+ +++ + +V +
Sbjct: 200 LNRMTTCGCPPGYVVYNIFIGSIC-GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 258
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F + G+ G D EM KG +PD Y+ +IT A ++EKA LF M
Sbjct: 259 FARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 315
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+V+TY +I FC AG ++A + +EM S GC+P + Y L+ A ++
Sbjct: 316 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 375
Query: 273 EAHEVIRHMVEKG 285
+A+++ MV+ G
Sbjct: 376 QANDIFHRMVDAG 388
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 94/201 (46%), Gaps = 3/201 (1%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ D GY P +TYN ++ G++D R+ EM SGF D T H L K +
Sbjct: 31 LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AL+++ F + T ++ GL A D F M C+P+VV Y
Sbjct: 91 WADALDMIERED---FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRT 147
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+++ ++ +L + + + M+T+G PN +NS++ +C + A ++ M + G
Sbjct: 148 LLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 207
Query: 251 CNPNFLVYNTLVSNLRNAGKL 271
C P ++VYN + ++ KL
Sbjct: 208 CPPGYVVYNIFIGSICGQEKL 228
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 109/255 (42%), Gaps = 9/255 (3%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
K F +RP K +YNA++ L Q L V ++MS+ G+ D T V C + L K
Sbjct: 32 KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFT---VGCFAHALCKE 88
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
++ LD + R F D ++ L + A++ L+ M+ P+V+ + TL
Sbjct: 89 GRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTL 148
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ G + L CK + M +GC P+ + ++ SY + A L + M T G
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 217 LPNVFTYNSMIRGFCMAGK------FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
P YN I C K D A + EM + C N + L GK
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268
Query: 271 LAEAHEVIRHMVEKG 285
+A ++I+ M+ KG
Sbjct: 269 FDKAFQLIKEMMRKG 283
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 5/183 (2%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D + G+ P TYN L+ VL + + M E GF L +
Sbjct: 29 DPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKE 88
Query: 164 GNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G DA D + + D V T MI+ + A ++A M +PNV T
Sbjct: 89 GRWADA----LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVT 144
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +++ GF + ++ M + GCNPN ++N+LV + N A A++++ M
Sbjct: 145 YRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT 204
Query: 283 EKG 285
G
Sbjct: 205 TCG 207
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 128/257 (49%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G + I+I C G++ A + + +K F P +Y +++A
Sbjct: 382 MSEFGLYPDCFCYTIIIGGYCKVGDINKAFQYLGEMLK---FGITPSVTTYTLLINACCK 438
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E++ Q+M EG PD++T+N ++ + G L + LLD M +G SPD T
Sbjct: 439 SGDMAMAEYLLQRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVT 498
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L P A ++L+ + G P V+ FT ++DG S+ GN + + M+
Sbjct: 499 YNALIHSLIARGYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMS 558
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PDVV + ++ Y A +++A LF M+ G P++ YN++I GFC AG +
Sbjct: 559 ERHVKPDVVTCSALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMN 618
Query: 238 EACTMMKEMESRGCNPN 254
AC ++ M G PN
Sbjct: 619 AACNLVAMMIDDGFLPN 635
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
FN RP Y++ + L +Q+MS+ G PD Y I++ ++G +++
Sbjct: 350 FNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGYCKVGDINK 409
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ L EM + G +P TY +L++ K A LL M G P V+ F L+D
Sbjct: 410 AFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDVVTFNCLID 469
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G + G L D M + G PD V Y +I S IA G +A+D+ +I +G P
Sbjct: 470 GFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSP 529
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V T+ +I GF G F+EA + M R P+ + + L++ A ++ EA+ +
Sbjct: 530 DVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALF 589
Query: 279 RHMVEKG 285
M++ G
Sbjct: 590 LKMLDAG 596
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 113/235 (48%), Gaps = 10/235 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G + T+ +LI C G++ +A +++R + L P ++N ++ G
Sbjct: 417 MLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLI---PDVVTFNCLIDGF-G 472
Query: 58 IRQY--KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ Y K E + M G +PD +TYN ++ + G ++ +L E+ R G SPD
Sbjct: 473 KKGYLQKAFE-LLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHELIRRGLSPDV 531
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T+ ++ K A + ++M E P V+ + L++G RA +D F +
Sbjct: 532 MTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSALLNGYCRARRMDEANALFLK 591
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M + G PD+V Y +I + +AG + A +L MI G LPN+ T+ + GF
Sbjct: 592 MLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPNITTHRAFALGF 646
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 5/233 (2%)
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDIL--TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + +L + +++ + D G+ L Y++++ K+ L+ E+ P
Sbjct: 159 AVGEEELCDLLFKLVYDTGFGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFPS 218
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
N LL L + + A ++L M+ G + + ++ GN+ +
Sbjct: 219 MGVCNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILM 278
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM N G DV+ YT++I + ++ A L MI G + + +S+I G+C G
Sbjct: 279 EMKNYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKG 338
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ D+A ++ R PN VY++ ++ L G + EA + + M E G Y
Sbjct: 339 RSDKAINLLNFFNVR---PNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLY 388
>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
[Vitis vinifera]
gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 146/321 (45%), Gaps = 36/321 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALLGIR 59
M + G T TFN LI G G+ + ++ + S+ N +P ++N+++ A +
Sbjct: 167 MKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKK 226
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ V +M+ G PD++TYN + A + G+ + ++ EM + P+ T
Sbjct: 227 RITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCG 286
Query: 120 ILLHVLGKGDKPLAALNLLNHMK-----------------------------------EV 144
I+++ K K AL L M+ E
Sbjct: 287 IIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEF 346
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P V+ F+T+M+ S G +D C+ FD+M G PD+ ++++ Y+ AGE EKA
Sbjct: 347 GVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKA 406
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ L M G PNV + ++I G+C AGK + A + ++M G PN + TL+
Sbjct: 407 ESLLTAMGKSGVQPNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWG 466
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
A + +A E+++ M +KG
Sbjct: 467 YGEAKEPQKAEELLQIMEQKG 487
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N+++ L I ++ M + G PD++T++ +M A +G +D+ + D+M
Sbjct: 320 FNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMV 379
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
++G PD H ++IL + +P A +LL M + G P+V+ FTT++ G AG ++
Sbjct: 380 KAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQPNVVIFTTIISGWCSAGKME 439
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+++M G P++ + +I Y A E +KA++L M KG P T +
Sbjct: 440 YASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEELLQIMEQKGVAPVKSTIQLVA 499
Query: 228 RGFCMAGKFDEACTMMKEME 247
+ G +EA + ++E
Sbjct: 500 DAWHALGLANEAKRIKNDVE 519
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 110/252 (43%), Gaps = 1/252 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +Y +L AL +++K I + ++ G PD + +N ++ A G + + +
Sbjct: 103 RPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMK 162
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTLMDGL 160
+ +M G P T+N L+ G P L LL+ M +E P+ F +L+
Sbjct: 163 IFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAW 222
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ +MA G PDVV Y + +Y GE +A+ + M +PN
Sbjct: 223 CNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNE 282
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T +I G+C GK +A + M + G +PN +++N+L+ + E +
Sbjct: 283 RTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTL 342
Query: 281 MVEKGKYIHLVS 292
M E G +V+
Sbjct: 343 MEEFGVKPDVVT 354
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK + + + + G P TY LL L + + + +L++ +++ G P + F
Sbjct: 85 GKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFF 144
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+++ S +GN+ F +M ++GC P + +I Y AG E+ L D M
Sbjct: 145 NAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQ 204
Query: 214 KGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ + PN T+NS+IR +C + EA ++ +M + G P+ + YNTL G+ +
Sbjct: 205 EENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETS 264
Query: 273 EAHEVIRHM 281
A +I M
Sbjct: 265 RAEGMILEM 273
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 124/289 (42%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+ E G T T+ L+ + + K + +P +NA+++A
Sbjct: 97 LTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGN 156
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR-SGFSPDFHTYN 119
K ++++M D G P T+N ++ G ++ +LLD M + P+ T+N
Sbjct: 157 VKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFN 216
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ + A N++ M G P V+ + TL ++ G + EM N
Sbjct: 217 SLIRAWCNKKRITEAWNVVYKMAASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNN 276
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF---CMAGKF 236
MP+ ++I Y G+++ A M G PN+ +NS+I+GF
Sbjct: 277 RVMPNERTCGIIINGYCKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGV 336
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
DEA T+M+E G P+ + ++T+++ + G + + E+ MV+ G
Sbjct: 337 DEALTLMEEF---GVKPDVVTFSTIMNAWSSVGLMDKCQEIFDDMVKAG 382
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+++L + KP A + N + E G P+++ +TTL+ L+R + ++ G
Sbjct: 77 LMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLISKLEKNG 136
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V + MI ++ +G +++A +F M +G P T+N++I+G+ AG +E
Sbjct: 137 LKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNAGMPEECL 196
Query: 241 TMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ M + PN +N+L+ N ++ EA V+ M G +V+
Sbjct: 197 KLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMAASGLQPDVVT 249
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V T LM+ L G + F+ + +G P ++ YT ++ + + L
Sbjct: 70 TVRSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQKRFKSIPSLI 129
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ G P+ +N+MI F +G EA + ++M+ RGC P +NTL+ NA
Sbjct: 130 SKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTFNTLIKGYGNA 189
Query: 269 GKLAEAHEVIRHMVEK 284
G E +++ M ++
Sbjct: 190 GMPEECLKLLDLMSQE 205
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 139/328 (42%), Gaps = 51/328 (15%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI + + GL + F + + P +Y A++HA L +Q
Sbjct: 253 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 312
Query: 65 EWVYQQMSDEG------------------------------------------------- 75
++ +M D G
Sbjct: 313 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 372
Query: 76 --YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
AP+++TY ++ + K+D H LLD M SG P+ Y+ L+ K K +
Sbjct: 373 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 432
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A + M + G+ PSV +T+L+D + + G LD +M C P+VV YT MI
Sbjct: 433 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 492
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
GE EKA L M KG PNV TY ++I G AGK D + + +M +GC+P
Sbjct: 493 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP 552
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N++ Y L+++L AG L +A ++ M
Sbjct: 553 NYVTYRVLINHLCAAGLLDKARLLLGEM 580
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 110/244 (45%), Gaps = 51/244 (20%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+GK D+ +L+ EM R GF PD TY+ ++ L K A L MK VG P V
Sbjct: 201 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 260
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF---- 208
+T L+D +AG ++ ++ F+EM + GC P VV YT +I +Y+ A ++ +A D+F
Sbjct: 261 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 320
Query: 209 ---------------DGMITKGQL--------------------------------PNVF 221
DG+ G + PNV
Sbjct: 321 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 380
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +++ G C A K D A ++ M S GC PN +VY+ L+ AGK+ A EV M
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440
Query: 282 VEKG 285
+ G
Sbjct: 441 TKCG 444
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 139/336 (41%), Gaps = 51/336 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ GF T++ +I K F + K+ P +Y ++ +
Sbjct: 214 MMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGL 273
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----FHRLLDE----------- 105
+ +W++++M G +P ++TY ++ A + ++ Q FHR++D
Sbjct: 274 IEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGA 333
Query: 106 ------------------------------------MGRSGFSPDFHTYNILLHVLGKGD 129
R +P+ TY L+ L K
Sbjct: 334 LVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAH 393
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A LL+ M G +P+ + + L+DG +AG +D+ + F +M G +P V YT
Sbjct: 394 KVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYT 453
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G L+ A + M+ PNV TY +MI G C G+ ++A ++ ME +
Sbjct: 454 SLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEK 513
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC+PN + Y L+ L AGK+ + ++ M KG
Sbjct: 514 GCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKG 549
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 17/286 (5%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N C CG VG K + + F P ++Y+ ++ L + + ++Q+M
Sbjct: 193 NFARCLCG-VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G PD+ TY I++ + + G ++Q L +EM G SP TY L+H K +
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 311
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC----------------KYFFDEMA 177
A ++ + M + G P+ + + L+DGL +AGN+ ++F
Sbjct: 312 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 371
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P+VV Y ++ A +++ A +L D M++ G PN Y+++I GFC AGK D
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + +M G P+ Y +L+ + G+L A +V+ M++
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 137/332 (41%), Gaps = 49/332 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSK-------------LFNFRPF 44
M++ G T+ L+ C G + A +V + I + P
Sbjct: 319 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 378
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y A++ L + + M G P+ + Y+ ++ + GK+D +
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M + G+ P HTY L+ + K + A+ +L+ M + P+V+ +T ++DGL R G
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ M KGC P+VV YT +I AG+++ + DLF M KG PN TY
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 558
Query: 225 SMIRGFCMAGKFDEA--------------------CT-------------MMKEMESRGC 251
+I C AG D+A C +++EMES G
Sbjct: 559 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGT 618
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
P VY L+ AG+L A E+ + M+E
Sbjct: 619 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 14/253 (5%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y +L L +Q + + M EG P+ +N ++ + ++L
Sbjct: 75 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 134
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD----------PSVLH 152
L+ M G P + YNI + + G + L + +LL+ +++ + +V +
Sbjct: 135 LNRMTTCGCPPGYVVYNIFIGSIC-GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 193
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F + G+ G D EM KG +PD Y+ +IT A ++EKA LF M
Sbjct: 194 FARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 250
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+V+TY +I FC AG ++A + +EM S GC+P + Y L+ A ++
Sbjct: 251 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 310
Query: 273 EAHEVIRHMVEKG 285
+A+++ MV+ G
Sbjct: 311 QANDIFHRMVDAG 323
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 139/326 (42%), Gaps = 47/326 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G ++ LI C G++ A++V F++ + P ++Y +++ +
Sbjct: 405 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV---FLQMTKCGYLPSVHTYTSLIDRMFK 461
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L V QM + P+++TY ++ R+G+ ++ +LL M G SP+ T
Sbjct: 462 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 521
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF---- 173
Y L+ LGK K +L+L M G P+ + + L++ L AG LD +
Sbjct: 522 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 581
Query: 174 -----------------------------DEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
+EM + G +P Y ++I + AG LE A
Sbjct: 582 QTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 641
Query: 205 QDLFDGMITKGQLPNVFT-----YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L M+ ++P+ Y S+I+ C+A + +EA + EM RG P V+
Sbjct: 642 MELHKEMM---EVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFV 698
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ L K EA ++ + +G
Sbjct: 699 CLIKGLVEVKKWDEALQLCYGICHEG 724
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M SGF D T H L K + AL+++ F + T ++ GL A
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWADALDMIERED---FKLDTVLCTHMISGLMEASY 57
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
D F M C+P+VV Y +++ ++ +L + + + M+T+G PN +NS
Sbjct: 58 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
++ +C + A ++ M + GC P ++VYN + ++ KL
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKL 163
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%)
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D V T MI+ + A ++A M +PNV TY +++ GF + ++
Sbjct: 41 DTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRII 100
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M + GCNPN ++N+LV + N A A++++ M G
Sbjct: 101 NMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG 142
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 130/245 (53%), Gaps = 3/245 (1%)
Query: 44 FKNSYNAILHALLGIRQYKLIEW---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F S A+ + G+R+ +E + +++++ G +P+I YN ++ + + D+
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAE 387
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L D MG+ G P+ TY+IL+ + + K AL+ L M ++G PSV + +L++G
Sbjct: 388 LLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGH 447
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G++ A + EM NK P VV YT ++ Y + G++ KA L+ M KG +P++
Sbjct: 448 CKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSI 507
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+T+ +++ G AG +A + EM PN + YN ++ G +++A E +
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNE 567
Query: 281 MVEKG 285
M+EKG
Sbjct: 568 MIEKG 572
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 134/306 (43%), Gaps = 38/306 (12%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A +V+R + F P YNA++ +L R + E ++ +M G P+
Sbjct: 346 GKVEEALNLVKRVAE---FGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPND 402
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH----------------- 123
+TY+I++ R GKLD L EM G P + YN L++
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAE 462
Query: 124 VLGKGDKPLA------------------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
++ K +P AL L + M G PS+ FTTL+ GL RAG
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGL 522
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ F EMA P+ V Y VMI Y G + KA + + MI KG +P+ ++Y
Sbjct: 523 IRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRP 582
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G C+ G+ EA + + C N + Y L+ GKL EA V + M +G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRG 642
Query: 286 KYIHLV 291
+ LV
Sbjct: 643 VDLDLV 648
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 117/238 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN ++ L ++ + + ++ + PD++TY ++C ++ + + ++DEM
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEML 324
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
R FSP + L+ L K K ALNL+ + E G P++ + L+D L + N D
Sbjct: 325 RLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFD 384
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ FD M G P+ V Y+++I + G+L+ A MI G P+V+ YNS+I
Sbjct: 385 EAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLI 444
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G A ++M EM ++ P + Y +L+ + GK+ +A + M KG
Sbjct: 445 NGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKG 502
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 118/243 (48%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+P +Y ++ L ++++++ + +M ++P + ++ + GK+++
Sbjct: 293 LKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEAL 352
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L+ + G SP+ YN L+ L KG A L + M ++G P+ + ++ L+D
Sbjct: 353 NLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMF 412
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G LD F EM + G P V Y +I + G++ A+ L MI K P V
Sbjct: 413 CRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTV 472
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY S++ G+C GK ++A + EM +G P+ + TL+S L AG + +A ++
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTE 532
Query: 281 MVE 283
M E
Sbjct: 533 MAE 535
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 16/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G ++ LI C G+ A+ V+ K N + Y +LH
Sbjct: 568 MIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG---NCELNEICYTGLLHGF-- 622
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R+ KL E V Q M G D++ Y +++ + F LL EM G PD
Sbjct: 623 CREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDD 682
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
Y ++ K A + + M G P+ + +T +++GL +AG ++ + +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSK 742
Query: 176 MANKGCMPDVV---CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
M +P+ V C+ ++T G+++KA +L + I KG L N TYN +IRGFC
Sbjct: 743 MRPGNSVPNQVTYGCFLDILTK--GVGDMKKAVELHNA-ILKGLLANTATYNMLIRGFCR 799
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ +EA ++ M G +P+ + Y T++S L + +A E+ M EKG
Sbjct: 800 QGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKG 852
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G + +N LI C G++ A ++ I KL P +Y +++
Sbjct: 428 MIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKL---EPTVVTYTSLMGGYCS 484
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M+ +G P I T+ ++ +R G + +L EM P+ T
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+++ + A LN M E G P + L+ GL G K F D +
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C + +CYT ++ + G+LE+A + M +G ++ Y +I G
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM RG P+ ++Y +++ G EA + M+ +G
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 119/261 (45%), Gaps = 3/261 (1%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
GLA ++ + I RP Y ++ +L ++ + + QM G +I+ Y
Sbjct: 209 GLAMELFDDMIN---VGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPY 265
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
N+++ + K+ + + ++ PD TY L+ L K + L +++ M
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLR 325
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
+ F PS ++L++GL + G ++ +A G P++ Y +I S ++
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDE 385
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+ LFD M G PN TY+ +I FC GK D A + + EM G P+ YN+L++
Sbjct: 386 AELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLIN 445
Query: 264 NLRNAGKLAEAHEVIRHMVEK 284
G ++ A ++ M+ K
Sbjct: 446 GHCKFGDISAAESLMAEMINK 466
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 107/243 (44%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +A+LH L+ R + L ++ M + G PD+ Y V+ + L L + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ +M +G + YN+L+ L K K A+ + + P V+ + TL+ GL +
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ DEM P + ++ G++E+A +L + G PN+F
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I C FDEA + M G PN + Y+ L+ GKL A + M+
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429
Query: 283 EKG 285
+ G
Sbjct: 430 DMG 432
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+P Y +++ A +K ++ M +EG P+ +TY V+ + G +++
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +M P+ TY L +L KG + L++ G + + L+ G
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G ++ M G PD + YT MI+ +++KA +L++ M KG P+
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
YN++I G C+AG+ +A + EM +G PN T +SN
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 142/390 (36%), Gaps = 105/390 (26%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G + TF L+ GL R V+ F + +N +P + +YN ++
Sbjct: 498 MTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MC-------AKY------------------- 91
+M ++G PD +Y + +C AK
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 92 ------RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
R GKL++ + +MG G D Y +L+ K L LL M + G
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRG 677
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P + +T+++D S+ G+ +D M N+GC+P+ V YT +I AG + +A+
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 206 DLFDGM-----------------------------------ITKGQLPNVFTYNSMIRGF 230
L M I KG L N TYN +IRGF
Sbjct: 738 ILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 231 CMAGKFDEAC-------------------TMMKE----------------MESRGCNPNF 255
C G+ +EA TM+ E M +G P+
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNTL+ AG++ +A E+ M+ +G
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 38/314 (12%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P T T +C+ G++ A +V+ I S RP Y ++ L ++
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIAS---GCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++M ++G APDI YN ++ + ++D+ L EM +G P+ TY +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVL----------------------------------- 151
+ + +A + M+E G P+ +
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAK 593
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+T LM+GL + +D + F EM KG PDV Y V+I + G ++KA +FD M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +G PNV YN ++ GFC +G+ ++A ++ EM +G +PN + Y T++ +G L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 272 AEAHEVIRHMVEKG 285
AEA + M KG
Sbjct: 714 AEAFRLFDEMKLKG 727
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ENG A T+ I E A K V+ + + P K +++
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL---PNKVLCTGLINEY-- 567
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ K+IE Y+ M D+G D TY ++M ++ K+D + EM G +PD
Sbjct: 568 CKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+Y +L++ K A ++ + M E G P+V+ + L+ G R+G ++ K DE
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ KG P+ V Y +I Y +G+L +A LFD M KG +P+ F Y +++ G C
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ A T+ +GC + +N L++ + GK EV+ +++
Sbjct: 748 VERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E +T+++LI C G V L + V+ F+ K A L+
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL----------FKTEKEFRTATLNVDGA 261
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + M +G P TY++++ ++ +L+ LL EM G S D HT
Sbjct: 262 LK-------LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHT 314
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L+ L KG AA L++ M G + + + +S+ G ++ K FD M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +P Y +I Y + + +L M + + + +TY ++++G C +G D
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++KEM + GC PN ++Y TL+ + +A V++ M E+G
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 38/277 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y +++ L + E ++++M +G APD+ +Y +++ +LG + + + DEM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P+ YN+LL + + A LL+ M G P+ + + T++DG ++G+L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF------------------ 208
FDEM KG +PD YT ++ ++E+A +F
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 209 --------------------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
DG + PN TYN MI C G + A + +M++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + Y +L++ G+ AE V + G
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y+ ++ LL R + + +M G Y+ +C + G +++ L D
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M SG P Y L+ + LL MK+ S + T++ G+ +G+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD EM GC P+VV YT +I +++ A + M +G P++F YNS
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G A + DEA + + EM G PN Y +S A + A A + ++ M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL---G 57
M+ +G ++ IC + G+ K F P +Y +++
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 58 IRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+RQ Y+L+ +M TY V+ G LD + ++ EM SG P+
Sbjct: 398 VRQGYELL----VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y L+ + + A+ +L MKE G P + + +L+ GLS+A +D + F EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P+ Y I+ YI A E A M G LPN +I +C K
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKV 573
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC+ + M +G + Y L++ L K+ +A E+ R M KG
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 135/328 (41%), Gaps = 37/328 (11%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
MI +G A+ + LI C E + R+ E ++ K N +Y ++ +
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNV-RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG 431
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ ++M G P+++ Y ++ + + R+L EM G +PD YN
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K + A + L M E G P+ + + G A + + EM
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 180 GCMPD-VVC----------------------------------YTVMITSYIAAGELEKA 204
G +P+ V+C YTV++ +++ A
Sbjct: 552 GVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+++F M KG P+VF+Y +I GF G +A ++ EM G PN ++YN L+
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G++ +A E++ M KG + + V+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVT 699
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 130/323 (40%), Gaps = 40/323 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G A+T+ +L+ + E F + + P SY +++ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M +EG P+++ YN+++ R G++++ LLDEM G P+ TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K A L + MK G P +TTL+DG R +++ F KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKG 761
Query: 181 CM---------------------------------------PDVVCYTVMITSYIAAGEL 201
C P+ V Y +MI G L
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A++LF M +P V TY S++ G+ G+ E + E + G P+ ++Y+ +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 262 VSNLRNAGKLAEAHEVIRHMVEK 284
++ G +A ++ M K
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAK 904
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS----PDFHTYNILLHVLGKGD 129
+G A +N ++ ++ GK + +L+ + F P+ TYNI++ L K
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
AA L + M+ P+V+ +T+L++G + G FDE G PD + Y+
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPN-----VFTYNSMIRGFCMAGKFDEACTMMK 244
V+I +++ G KA L D M K + + + T +++ GF G+ + A +M+
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Query: 245 EM 246
M
Sbjct: 940 NM 941
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGY----APDILTYNIVMCAKYRLGKLDQFHRLL 103
+NA+++ + + +L V ++ D + P+ +TYNI++ + G L+ L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M + P TY LL+ K + + + G +P + ++ +++ +
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 164 GNLDACKYFFDEM-----ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G D+M + GC + +++ + GE+E A+ + + M+ +P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 219 NVFTYNSMIRGFCMA 233
+ T +I C++
Sbjct: 949 DSATVIELINESCIS 963
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 141/314 (44%), Gaps = 38/314 (12%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P T T +C+ G++ A +V+ I S RP Y ++ L ++
Sbjct: 417 PYTYGTVVKGMCSSGDLDGAYNIVKEMIAS---GCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++M ++G APDI YN ++ + ++D+ L EM +G P+ TY +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVL----------------------------------- 151
+ + +A + M+E G P+ +
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+T LM+GL + +D + F EM KG PDV Y V+I + G ++KA +FD M
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ +G PNV YN ++ GFC +G+ ++A ++ EM +G +PN + Y T++ +G L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 272 AEAHEVIRHMVEKG 285
AEA + M KG
Sbjct: 714 AEAFRLFDEMKLKG 727
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 136/288 (47%), Gaps = 11/288 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ENG A T+ I E A K V+ + + P K +++
Sbjct: 513 MVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVL---PNKVLCTGLINEY-- 567
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ K+IE Y+ M D+G D TY ++M ++ K+D + EM G +PD
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+Y +L++ K A ++ + M E G P+V+ + L+ G R+G ++ K DE
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ KG P+ V Y +I Y +G+L +A LFD M KG +P+ F Y +++ G C
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ A T+ +GC + +N L++ + GK EV+ +++
Sbjct: 748 VERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMD 794
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 14/269 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF-------NFRPFKNSYNAILH 53
M E G +N LI +GL++ +R +++ F +P +Y A +
Sbjct: 478 MKEQGIAPDIFCYNSLI-----IGLSK--AKRMDEARSFLVEMVENGLKPNAFTYGAFIS 530
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ ++ + ++M + G P+ + ++ + GK+ + M G
Sbjct: 531 GYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG 590
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TY +L++ L K DK A + M+ G P V + L++G S+ GN+ F
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DEM +G P+V+ Y +++ + +GE+EKA++L D M KG PN TY ++I G+C +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G EA + EM+ +G P+ VY TLV
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 20/288 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E +T+++LI C G V L + V+ F+ K A L+
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVL----------FKTEKEFRTATLNVDGA 261
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + M +G P TY++++ ++ +L+ LL EM G S D HT
Sbjct: 262 LK-------LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHT 314
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L+ L KG AA L++ M G + + + +S+ G ++ K FD M
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMI 374
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +P Y +I Y + + +L M + + + +TY ++++G C +G D
Sbjct: 375 ASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++KEM + GC PN ++Y TL+ + +A V++ M E+G
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 120/289 (41%), Gaps = 8/289 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL---G 57
M+ +G ++ IC + G+ K F P +Y +++
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 58 IRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+RQ Y+L+ +M TY V+ G LD + ++ EM SG P+
Sbjct: 398 VRQGYELL----VEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVV 453
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y L+ + + A+ +L MKE G P + + +L+ GLS+A +D + F EM
Sbjct: 454 IYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM 513
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P+ Y I+ YI A E A M G LPN +I +C GK
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EAC+ + M +G + Y L++ L K+ +A E+ R M KG
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG 622
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 117/277 (42%), Gaps = 38/277 (13%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y +++ L + E ++++M +G APD+ +Y +++ +LG + + + DEM
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P+ YN+LL + + A LL+ M G P+ + + T++DG ++G+L
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF------------------ 208
FDEM KG +PD YT ++ ++E+A +F
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 209 --------------------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
DG + PN TYN MI C G + A + +M++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + Y +L++ G+ AE V + G
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAG 870
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 105/240 (43%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y+ ++ LL R + + +M G Y+ +C + G +++ L D
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M SG P Y L+ + LL MK+ S + T++ G+ +G+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD EM GC P+VV YT +I +++ A + M +G P++F YNS
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G A + DEA + + EM G PN Y +S A + A A + ++ M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 130/323 (40%), Gaps = 40/323 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G A+T+ +L+ + E F + + P SY +++ +
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M +EG P+++ YN+++ R G++++ LLDEM G P+ TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K A L + MK G P +TTL+DG R +++ F KG
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKG 761
Query: 181 CM---------------------------------------PDVVCYTVMITSYIAAGEL 201
C P+ V Y +MI G L
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A++LF M +P V TY S++ G+ G+ E + E + G P+ ++Y+ +
Sbjct: 822 EAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVI 881
Query: 262 VSNLRNAGKLAEAHEVIRHMVEK 284
++ G +A ++ M K
Sbjct: 882 INAFLKEGMTTKALVLVDQMFAK 904
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS----PDFHTYNILLHVLGKGD 129
+G A +N ++ ++ GK + +L+ + F P+ TYNI++ L K
Sbjct: 760 KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEG 819
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
AA L + M+ P+V+ +T+L++G + G FDE G PD + Y+
Sbjct: 820 NLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYS 879
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPN-----VFTYNSMIRGFCMAGKFDEACTMMK 244
V+I +++ G KA L D M K + + + T +++ GF G+ + A +M+
Sbjct: 880 VIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVME 939
Query: 245 EM 246
M
Sbjct: 940 NM 941
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/195 (18%), Positives = 83/195 (42%), Gaps = 9/195 (4%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGY----APDILTYNIVMCAKYRLGKLDQFHRLL 103
+NA+++ + + +L V ++ D + P+ +TYNI++ + G L+ L
Sbjct: 769 FNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M + P TY LL+ K + + + G +P + ++ +++ +
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 164 GNLDACKYFFDEM-----ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G D+M + GC + +++ + GE+E A+ + + M+ +P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 219 NVFTYNSMIRGFCMA 233
+ T +I C++
Sbjct: 949 DSATVIELINESCIS 963
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 131/286 (45%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGIR 59
M++ G+ T LI + G K F+K + +++P ++Y +++H
Sbjct: 327 MVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKED 386
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ E + +M ++G P+ TY ++ + G ++ + L+D MG+ GFS + TYN
Sbjct: 387 KLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYN 446
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+ L K + L A LL +G + +T L+ L R + FF +M
Sbjct: 447 AFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKA 506
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+ Y +I ++ +E+++ LF + G +P TY SMI G+C A
Sbjct: 507 GVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLA 566
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M GC P+ L Y L+S L KL EA ++ MV+KG
Sbjct: 567 LKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKG 612
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 110/222 (49%), Gaps = 1/222 (0%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E V+ +M G PD ++Y ++ A R+G++ R L +M R GF D T +++
Sbjct: 216 ENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMIST 275
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + E+G P++++FT+L++GL + G++ +EM KG P+
Sbjct: 276 FCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPN 335
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMM 243
V +T +I G EKA LF ++ PNV TY SMI G+C K + A ++
Sbjct: 336 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLL 395
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ +G PN Y L+ AG +A+E++ M ++G
Sbjct: 396 SRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEG 437
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M EG++ +I TYN + + + G+ + +LL + R G D TY IL+ L +
Sbjct: 433 MGKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRAD 492
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AL + M + G P + + TL+ SR ++ + F E G +P YT
Sbjct: 493 TREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTS 552
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
MI Y + A F+ M G P+ TY ++I G C K DEAC + + M +G
Sbjct: 553 MICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKG 612
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKR 296
+P + TL A A VI ++K +I V+ R
Sbjct: 613 LSPCEVTRLTLAYEYCKQDDSATAM-VILERLDKKLWIRTVNTLIR 657
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+GK + ++ EM G T N + V G+ A N+ + M+ G P +
Sbjct: 174 IGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVS 233
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ + R G + + +M +G + D T+MI+++ G + FD +
Sbjct: 234 YKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWV 293
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G PN+ + S+I G C G +A M++EM +G PN + L+ L G
Sbjct: 294 ELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTE 353
Query: 273 EAHEVIRHMVEKGKY 287
+A + +V Y
Sbjct: 354 KAFRLFLKLVRSDDY 368
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+G F + ++ V + K A+N++ M+ G +V + G
Sbjct: 152 IGNENFERAHEVMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGL 211
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ + FDEM +G PD V Y +M +Y G + M+ +G + + T
Sbjct: 212 VGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTL 271
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
MI FC G + G PN + + +L++ L G + +A E++ MV+KG
Sbjct: 272 MISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKG 331
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 4/215 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G T+N LI + + F ++ P K +Y +++ R
Sbjct: 503 MFKAGVQPDMHTYNTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRN 562
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L + +MSD G PD LTY ++ + KLD+ +L + M G SP T
Sbjct: 563 VSLALKFFNRMSDHGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCEVTRLT 622
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + K D A+ +L + + + +V TL+ L + FF ++ +K
Sbjct: 623 LAYEYCKQDDSATAMVILERLDKKLWIRTV---NTLIRKLCSERKVGMAVLFFHKLLDKD 679
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
D V T T+ + + DL + I+KG
Sbjct: 680 QNVDRVTLTAFTTACYESNKYALVSDLSE-RISKG 713
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 59/152 (38%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI R+ + F K +P ++YN ++ A R+ +
Sbjct: 472 GLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQPDMHTYNTLIAAFSRQRRMEES 531
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E ++ + G P TY ++C R + + + M G +PD TY L+
Sbjct: 532 EKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSDHGCTPDSLTYGALISG 591
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
L K K A L M + G P + TL
Sbjct: 592 LCKESKLDEACQLYEAMVDKGLSPCEVTRLTL 623
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 131/242 (54%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN ++ +++ + M +G P+++T+N+++ R G+L + +
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM R G+ PD TYN L++ K AL L M G P+V+ +T+L++ + +
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
AGNL+ FFD+M +G P+ YT +I + G L++A + + M G +P++ T
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I G C+ G+ +EA ++++M +G P+ + Y+T++S +L A ++ M+
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255
Query: 283 EK 284
K
Sbjct: 256 GK 257
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 118/235 (50%), Gaps = 6/235 (2%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++M G P+++TYN ++ +L + D+ L MG G P+ T+N++++ L +
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ +L M G+ P + + TL++G + GN EM G P+VV
Sbjct: 66 DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVT 125
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT +I S AG L +A + FD M +G PN TY ++I GF G DEA ++ EM
Sbjct: 126 YTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMT 185
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
G P+ + YN L++ G++ EA +++ MV KG Y ++S F R
Sbjct: 186 RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR 240
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 136/281 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TFN++I G ++ E ++ + P + +YN +++ +
Sbjct: 48 GLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQA 107
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ +M G +P+++TY ++ + + G L++ D+M G P+ TY +++
Sbjct: 108 LVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIING 167
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ A +LN M GF PS++ + L++G G ++ +M KG +PD
Sbjct: 168 FAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPD 227
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ +I+ + EL++A + MI K LP+ TY+S+I+G C + EAC M +
Sbjct: 228 VVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQ 287
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + P+ Y TL++ G L +A + M++KG
Sbjct: 288 EMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKG 328
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 33 FIKS-KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKY 91
F++S L P ++N I++ L + K V +MS +GY PD +TYN ++
Sbjct: 40 FLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYC 99
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
+ G Q L EM R+G SP+ TY L++ + K A+ + M G P+
Sbjct: 100 KEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNER 159
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+TT+++G ++ G LD +EM G +P +V Y +I + G +E+A L M
Sbjct: 160 TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ KG LP+V +Y+++I GF + D A M EM + P+ + Y++L+ L +L
Sbjct: 220 VGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL 279
Query: 272 AEAHEVIRHMV 282
EA ++ + M+
Sbjct: 280 TEACDMFQEML 290
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 136/284 (47%), Gaps = 12/284 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T+N L+ C G A + +++ L P +Y ++++++
Sbjct: 79 MSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL---SPNVVTYTSLINSMCK 135
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ QM G P+ TY ++ + G LD+ +R+L+EM RSGF P T
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195
Query: 118 YNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
YN L++ VLG+ ++ A+ LL M G P V+ ++T++ G +R LD
Sbjct: 196 YNALINGHCVLGRMEE---AIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKV 252
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM K +PD V Y+ +I L +A D+F M+T P+ FTY ++I +C G
Sbjct: 253 EMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEG 312
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++A + EM +G P+ + YN L++ L + EA ++
Sbjct: 313 DLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 142/308 (46%), Gaps = 25/308 (8%)
Query: 5 GFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIR 59
G RT+ +I + GL A +V+ +S F P +YNA++ H +LG
Sbjct: 153 GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS---GFIPSIVTYNALINGHCVLGRM 209
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + Q M +G PD+++Y+ ++ R +LD+ ++ EM PD TY+
Sbjct: 210 EEAI--GLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYS 267
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L + + A ++ M + P +TTL++ + G+L+ + DEM K
Sbjct: 268 SLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQK 327
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI------------ 227
G +PD V Y V+I ++A+ L + +P+ TYN++I
Sbjct: 328 GFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAV 387
Query: 228 ---RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+GFCM G DEA + + M ++ PN +YN ++ G + +A+++ + MV
Sbjct: 388 ALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHV 447
Query: 285 GKYIHLVS 292
H V+
Sbjct: 448 DFVPHTVT 455
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
R EM R+G P+ TYN ++ K + A L M G +P+++ F +++GL
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G L EM+ KG +PD V Y ++ Y G +A L M+ G PNV
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY S+I C AG + A +M RG PN Y T+++ G L EA+ V+
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNE 183
Query: 281 MVEKG 285
M G
Sbjct: 184 MTRSG 188
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
L M+ G P+V+ + T++DG + D F M KG P+++ + ++I
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G L++ ++ M KG +P+ TYN+++ G+C G F +A + EM G +P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y +L++++ AG L A E M +G
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG 153
>gi|255557937|ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540761|gb|EEF42321.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1429
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 132/275 (48%), Gaps = 6/275 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI C + V+ F + +P +YNA++ E +++++
Sbjct: 284 TYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKEL 343
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+GY PD +TYN ++ A R G +D+ + +EM + GF D TYN ++H+ GK +
Sbjct: 344 ESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMTYNTIIHMYGKQGQH 403
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L MK G P + +T L+D L +A + EM N G P + Y+ +
Sbjct: 404 GLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAANVMSEMLNIGVKPTLRTYSAL 463
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM---KEMES 248
I Y AG+ +A++ FD M G P+ Y+ M+ F +FDEA M +EM
Sbjct: 464 ICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFL---RFDEATKAMMLYREMVR 520
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
G P+ VY ++ NL K+ + +IR M E
Sbjct: 521 DGITPDPTVYGAMLRNLGRENKVEDIQRIIRDMEE 555
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 100/209 (47%), Gaps = 2/209 (0%)
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK--PLAALNL 137
+ YN +M R G+ ++ +LD M G PD ++N L++ K P A+ L
Sbjct: 210 VQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIEL 269
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
LN ++ G P ++ + TL+ SR NL+ FD+M C PD+ Y MI+ Y
Sbjct: 270 LNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGR 329
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G KA+ LF + +KG P+ TYNS++ F G D+ + EM G + +
Sbjct: 330 CGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMGFIRDEMT 389
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
YNT++ G+ A ++ R M G+
Sbjct: 390 YNTIIHMYGKQGQHGLALQLYRDMKLSGR 418
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 123/285 (43%), Gaps = 2/285 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQ 60
E+ T + +N ++ G KV + P S+N +++A L G
Sbjct: 203 ESTVDNTVQVYNAMMGVYARTGRFNKVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMT 262
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ G PDI+TYN ++ A R L++ ++ D+M PD TYN
Sbjct: 263 PNVAIELLNEVRRSGLRPDIITYNTLISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNA 322
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ V G+ A L ++ G+ P + + +L+ +R GN+D K +EM G
Sbjct: 323 MISVYGRCGFSGKAEQLFKELESKGYFPDAVTYNSLLYAFAREGNVDKVKEICNEMVQMG 382
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ D + Y +I Y G+ A L+ M G+ P+ TY +I A K EA
Sbjct: 383 FIRDEMTYNTIIHMYGKQGQHGLALQLYRDMKLSGRTPDAITYTVLIDSLGKANKMVEAA 442
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M EM + G P Y+ L+ AG+ EA E M G
Sbjct: 443 NVMSEMLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSG 487
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 131/314 (41%), Gaps = 22/314 (7%)
Query: 5 GFPTTARTFNILICTCG----EVGLARKVVERFIKSKLF--------NFRPF-----KNS 47
GFP TA L G ++ + V+E + K KL+ N R +
Sbjct: 713 GFPETAHYLIDLAEIEGMPFDKISIDVAVIETYGKLKLWQKAESLVGNLRQRCTNVDRKV 772
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+NA++ A Y+ V+ M +G +P + + N ++ A G+L++ + + E+
Sbjct: 773 WNALIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQ 832
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
GF + ++L + A + MK G+ P++ + ++ L + +
Sbjct: 833 DMGFQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVR 892
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ EM G PD+ + M+ Y + K ++ + G P+ TYN++I
Sbjct: 893 DVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLI 952
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG-- 285
+C + +E C++M EM G P Y +L++ + +A E+ ++ KG
Sbjct: 953 VMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSK 1012
Query: 286 ---KYIHLVSKFKR 296
+ H++ K R
Sbjct: 1013 LDRSFYHIMMKIYR 1026
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
R +SP+ +L VLGK ++ A+ + E D +V + +M +R G +
Sbjct: 169 RHWYSPNARMLATILAVLGKANQEALAVEIFIR-AESTVDNTVQVYNAMMGVYARTGRFN 227
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK--AQDLFDGMITKGQLPNVFTYNS 225
+ D M +GC PD+V + +I + + AG + A +L + + G P++ TYN+
Sbjct: 228 KVQGMLDLMRERGCEPDLVSFNTLINARLKAGAMTPNVAIELLNEVRRSGLRPDIITYNT 287
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I +EA + +ME+ C P+ YN ++S G +A ++ + + KG
Sbjct: 288 LISACSRESNLEEAVKVFDDMEAHYCQPDLWTYNAMISVYGRCGFSGKAEQLFKELESKG 347
Query: 286 KYIHLVS 292
+ V+
Sbjct: 348 YFPDAVT 354
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 9/277 (3%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G+ T + I+I + R V + + FRP + +N++L GI ++
Sbjct: 870 GYFPTMHLYRIMIGLLCKGKRVRDVEAMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKT 929
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+YQ++ ++G PD TYN ++ R + ++ L+ EM R G P TY L+
Sbjct: 930 VQIYQRIKEDGLQPDEDTYNTLIVMYCRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAA 989
Query: 125 LGKGDKPLAALNLLNHMKEVG--FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
GK + A L + G D S H +M +GN + M + G
Sbjct: 990 FGKQQLVVDAEELFEELLSKGSKLDRSFYHI--MMKIYRNSGNHSKAEKLLSMMKDAGVE 1047
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P + +++ SY ++G+ ++A+ + + G + Y+S+I + +
Sbjct: 1048 PTIATMHLLMVSYGSSGQPQEAEKVLTNLKEMGLSLSTLPYSSVIDAYLKNKDYSVGIQK 1107
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAE-AHEVI 278
+ EM+ G P+ ++ + A L+E H+ I
Sbjct: 1108 LVEMKKEGLEPDHRIWTCFI----RAASLSEHTHDAI 1140
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 109/245 (44%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F+ K+S IL A + + +YQ M GY P + Y I++ + ++
Sbjct: 836 FQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVE 895
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++ EM +GF PD +N +L + D + + +KE G P + TL+
Sbjct: 896 AMVTEMEEAGFRPDLSIWNSMLRLYTGIDDFRKTVQIYQRIKEDGLQPDEDTYNTLIVMY 955
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R + EM G P + Y +I ++ + A++LF+ +++KG +
Sbjct: 956 CRDHRPEEGCSLMHEMRRIGLEPKLDTYKSLIAAFGKQQLVVDAEELFEELLSKGSKLDR 1015
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
Y+ M++ + +G +A ++ M+ G P + L+ + ++G+ EA +V+ +
Sbjct: 1016 SFYHIMMKIYRNSGNHSKAEKLLSMMKDAGVEPTIATMHLLMVSYGSSGQPQEAEKVLTN 1075
Query: 281 MVEKG 285
+ E G
Sbjct: 1076 LKEMG 1080
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/262 (18%), Positives = 102/262 (38%), Gaps = 5/262 (1%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+ F + + LI C E + + F + +P K+ Y +++ + +
Sbjct: 658 DWFTGSCTMYESLIQCCEENEFTAEASQIFSDMRFNGVKPSKSLYRSMVLMYCKMGFPET 717
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR---LLDEMGRSGFSPDFHTYNI 120
++ EG D ++ ++ + Y GKL + + L+ + + + D +N
Sbjct: 718 AHYLIDLAEIEGMPFDKISIDVAVIETY--GKLKLWQKAESLVGNLRQRCTNVDRKVWNA 775
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ A + N M G P+V L+ L G L+ E+ + G
Sbjct: 776 LIQAYAASGCYEQARAVFNTMMRDGPSPTVDSINGLLQALIVDGRLEELYVVTQEIQDMG 835
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+++ ++ + +A+ ++ GM G P + Y MI C + +
Sbjct: 836 FQISKSSILLILDAFARVSNIAEAKKIYQGMKAAGYFPTMHLYRIMIGLLCKGKRVRDVE 895
Query: 241 TMMKEMESRGCNPNFLVYNTLV 262
M+ EME G P+ ++N+++
Sbjct: 896 AMVTEMEEAGFRPDLSIWNSML 917
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERF-IKSKLFNF--RPFKNSYNAILHALLGIRQ 60
+G A T+ +LI + G+ A K+VE + S++ N +P +Y+A++ Q
Sbjct: 416 SGRTPDAITYTVLIDSLGK---ANKMVEAANVMSEMLNIGVKPTLRTYSALICGYARAGQ 472
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E + M G PD L Y++++ R + + L EM R G +PD Y
Sbjct: 473 RLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDEATKAMMLYREMVRDGITPDPTVYGA 532
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV-GFDPSVL 151
+L LG+ +K ++ M+EV G +P +
Sbjct: 533 MLRNLGRENKVEDIQRIIRDMEEVCGMNPQAI 564
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T RT++ LIC G + E F + RP + +Y+ +L L +
Sbjct: 448 MLNIGVKPTLRTYSALICGYARAGQRLEAEETFDCMRRSGIRPDQLAYSVMLDVFLRFDE 507
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y++M +G PD Y ++ R K++ R++ +M
Sbjct: 508 ATKAMMLYREMVRDGITPDPTVYGAMLRNLGRENKVEDIQRIIRDM 553
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 3/267 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T T+ + G+V R + E K + F P SY+ ++H L Q + +
Sbjct: 532 TLLNTYMDCVFKAGDVEKGRAIFEDI---KGYGFLPDVRSYSILIHGLTKAGQARETSSI 588
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M +G+A D YN V+ + GKLD+ + +L+EM P TY ++ L K
Sbjct: 589 FHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAK 648
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D+ A L K G + +V+ +++L+DG + G +D +EM KG P+V
Sbjct: 649 IDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 708
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++ + + A E+ +A F M PN +TY+ +I G C K+++A +EM+
Sbjct: 709 WNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ 768
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+G PN + Y T+++ L G + +A
Sbjct: 769 KQGLVPNVVTYTTMIAGLAKVGNITDA 795
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 139/286 (48%), Gaps = 40/286 (13%)
Query: 33 FIKSKLFNFRPF-KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-PDILTYNIVMCAK 90
F+ S + P ++YNA+L L +E V ++MS GY P+ ++V A
Sbjct: 101 FLASSAASPHPLPADAYNAVLPFL--SHDLAAMEKVLEEMSVLGYGVPNPACADLV-SAL 157
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
R +LD R++ M R F P F Y +L+ + + +P AL LL M+EVG++ V
Sbjct: 158 VRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGV 217
Query: 151 LHFTTLMDGLSR-----------------------------------AGNLDACKYFFDE 175
FTTL+ L+R AGN+D FF E
Sbjct: 218 PLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHE 277
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ ++G PD V YT MI AG L +A++LF M T+ +P + YN+MI G+ AG+
Sbjct: 278 LKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQ 337
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
F+ A ++ +++ RGC P+ + +N++++ L K+ EA + M
Sbjct: 338 FENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM 383
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 147/300 (49%), Gaps = 12/300 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF AR +N ++ C G++ A +V+E K+ P +Y +I+ L
Sbjct: 592 MKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM---KVKRVPPTVATYGSIIDGLAK 648
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +L+EM + G +P+ +T
Sbjct: 649 IDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 708
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L K ++ AL MKE+ P+ ++ L++GL R + F+ EM
Sbjct: 709 WNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ 768
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VV YT MI G + A LF+ G P+ ++N++I G A +
Sbjct: 769 KQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAI 828
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV------IRHMVEKGKYIHLV 291
EA + +E +GC N +L+ L A L +A V +RH + + + L+
Sbjct: 829 EAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGFGENTVRHFFQWTEGLDLL 888
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 130/264 (49%), Gaps = 2/264 (0%)
Query: 30 VERFIKS-KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
ER I + + FRP ++Y ++ A+ RQ + + +QM + GY + + ++
Sbjct: 166 AERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVR 225
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
A R G+++ L+DE+ S PD YN+ + GK A + +K G P
Sbjct: 226 ALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKP 285
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ +T+++ L +AG L + F +M + +P Y MI Y +AG+ E A L
Sbjct: 286 DDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLL 345
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
D + +G +P+V ++NS++ K DEA T+ + M+ + PN YN ++ L A
Sbjct: 346 DQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMA 404
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
GK+ EA+ + M G + +L++
Sbjct: 405 GKVEEAYMIRDEMEHAGLFPNLLT 428
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 110/217 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M+ G PD+ N M ++ G +++ + +++ GF PD +Y+IL+H L
Sbjct: 518 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 577
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + ++ + MK+ GF + ++DG ++G LD +EM K P V
Sbjct: 578 KAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVA 637
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I L++A LF+ +KG NV Y+S+I GF G+ DEA +++EM
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 697
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+G PN +N+L+ L A ++ EA + M E
Sbjct: 698 MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKE 734
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%), Gaps = 1/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N+ I G+ G + F + K +P SY +++ L + E ++ QM
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
E P YN ++ G+ + ++LLD++ G P ++N +L LGK K
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVD 374
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL L MK+ +P+ + ++D L AG ++ DEM + G P+++ +M+
Sbjct: 375 EALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMV 433
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A + E A ++F+ +G PN TY S+I G G D+A + + M G N
Sbjct: 434 DRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHN 493
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N +VY +L+ N G+ + H++ + M +G
Sbjct: 494 ANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 116/226 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ + G+ PD+ +Y+I++ + G+ + + M + GF+ D YN ++
Sbjct: 553 IFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFC 612
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A +L MK P+V + +++DGL++ LD F+E +KG +V+
Sbjct: 613 KSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + G +++A + + M+ KG PNV+T+NS++ A + +EA + M
Sbjct: 673 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSM 732
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ C+PN Y+ L++ L K +A + M ++G ++V+
Sbjct: 733 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVT 778
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 107/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M D G+ + + Y ++ + G+ + H++ EM R G PD N + +
Sbjct: 483 LFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVF 542
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + +K GF P V ++ L+ GL++AG F M +G D
Sbjct: 543 KAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDAR 602
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ + +G+L+KA ++ + M K P V TY S+I G + DEA + +E
Sbjct: 603 AYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEA 662
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S+G N +VY++L+ G++ EA+ ++ M++KG
Sbjct: 663 KSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 136/307 (44%), Gaps = 36/307 (11%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A +N +I G G + + K P S+N+IL L R+ +++
Sbjct: 322 AYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFE 381
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M + P+ TYNI++ GK+++ + + DEM +G P+ T NI++ L K
Sbjct: 382 AMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAK 440
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYF---------------- 172
K A + + G +P+ + + +L+DGL + GN+D A + F
Sbjct: 441 KFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYT 500
Query: 173 ------------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
F EM +GC PD+ + AG++EK + +F+ +
Sbjct: 501 SLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY 560
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G LP+V +Y+ +I G AG+ E ++ M+ +G + YN +V +GKL +A
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620
Query: 275 HEVIRHM 281
+EV+ M
Sbjct: 621 YEVLEEM 627
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 140/294 (47%), Gaps = 7/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++ P ++ T+NI+I C G+V A + + + LF P + N ++ L
Sbjct: 383 MKKDAEPNSS-TYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF---PNLLTVNIMVDRLCK 438
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++++ +++ S G P+ +TY ++ + G +D +RL + M +G + +
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVV 498
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + + M G P + T MD + +AG+++ + F+++
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK 558
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +PDV Y+++I AG+ + +F M +G + YN+++ GFC +GK D
Sbjct: 559 GYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLD 618
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+A +++EM+ + P Y +++ L +L EA+ + KG ++++
Sbjct: 619 KAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 672
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 118/221 (53%), Gaps = 2/221 (0%)
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++Q M D G P I ++N ++ A + + +G SP+ TYNIL+ +
Sbjct: 100 LFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKIS 159
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + LL M E G +P +L + TL++ L+++GNL FDEM+ +G PDV
Sbjct: 160 CKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDV 219
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMK 244
+CY ++I ++ G+ KA +++ ++T+ + P+V TYN MI G C GK DE+ M
Sbjct: 220 MCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWN 279
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ +P+ +++++ L AG A +V + M+E G
Sbjct: 280 RMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESG 320
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 146/285 (51%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+ E+ + T+NI+I ++G + +E + + K P ++++++H L
Sbjct: 246 LTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGN 305
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E V+Q+M + G +PD+ TYN ++ +R GKL++ L + M ++ + +YN+
Sbjct: 306 FNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNM 364
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A+ + E G + L++GL + G L+ +E N+G
Sbjct: 365 LIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEG 424
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D Y+ M+ G LE+A +L M + N +NS+I G+ A K +EA
Sbjct: 425 ADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAI 484
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++EM+S+ C P + YNT+++ L A + ++A+ ++ M+E+G
Sbjct: 485 SVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG 529
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 135/279 (48%), Gaps = 16/279 (5%)
Query: 18 CTCGEVGLARKVVERFIKSKL--------------FNFRPFKNSYNAILHALLGIRQYKL 63
CTC E +A ++ + K + F P S+N++L+A + Q++
Sbjct: 74 CTCSE-DVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWRE 132
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
E + G +P++ TYNI++ + + ++ LL M +G +PD +Y L++
Sbjct: 133 AELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLIN 192
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM- 182
L K L A+ L + M G +P V+ + L+DG R G+ + + + +
Sbjct: 193 ALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY 252
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P V Y +MI G+L+++ ++++ M + P++FT++SMI G AG F+ A +
Sbjct: 253 PSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKV 312
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+EM G +P+ YN ++S L GKL + E+ M
Sbjct: 313 FQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM 351
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 140/332 (42%), Gaps = 46/332 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN-----SYNAILHAL 55
MIE+G RT+N ++ G K E L+N N SYN ++ L
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFE------LWNVMSKNNCCNIVSYNMLIQGL 369
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
L ++ + +Q + + G D TY +++ + G L++ R+L+E G D
Sbjct: 370 LDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDT 429
Query: 116 HTYNILLHVLGKGD-----------------------------------KPLAALNLLNH 140
Y+ ++H L K K A+++L
Sbjct: 430 FAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLRE 489
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
MK P+V+ + T+++GL +A EM +G PD++ Y+++I +
Sbjct: 490 MKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEK 549
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
++ A +L+ I K P++ +N +I G C A K D A + +M C P+ + +NT
Sbjct: 550 VDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNT 609
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ L AG EA ++ ++E G ++S
Sbjct: 610 IMEGLYKAGDCVEALKIWDRILEAGLQPDIIS 641
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 118/252 (46%), Gaps = 4/252 (1%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDIL 81
G+ + VE + K + + +N++++ +R +KL E V ++M + AP ++
Sbjct: 443 GMLEQAVELIHQMKKNRRKLNSHVFNSLINGY--VRAFKLEEAISVLREMKSKDCAPTVV 500
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
+YN ++ + + + L EM G PD TY++L+ L +G+K ALNL +
Sbjct: 501 SYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQC 560
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
P + ++ GL A +D F +M C+PD+V + ++ AG+
Sbjct: 561 INKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDC 620
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+A ++D ++ G P++ +YN +G C + +A + + RG PN +N L
Sbjct: 621 VEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVL 680
Query: 262 VSNLRNAGKLAE 273
V + + L E
Sbjct: 681 VRAVVDDKPLME 692
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 133/286 (46%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E G + T+ +LI C G + A +++E +++ + F +Y++++H L
Sbjct: 387 ERGLKADSTTYGLLINGLCKNGYLNKALRILEE-AENEGADLDTF--AYSSMVHGLCKKG 443
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + QM + +N ++ R KL++ +L EM +P +YN
Sbjct: 444 MLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYN 503
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ L K ++ A L M E G P ++ ++ L+DGL R +D + + NK
Sbjct: 504 TIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK 563
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD+ + ++I A +++ A ++F M +P++ T+N+++ G AG EA
Sbjct: 564 RLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEA 623
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + G P+ + YN L + ++++A E + +++G
Sbjct: 624 LKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRG 669
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 136/278 (48%), Gaps = 6/278 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G A TF LI C G++G A + ++ I F+P +Y +++ L RQ
Sbjct: 110 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE---GFQPNVVTYGTLINGLCKDRQV 166
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M +G +P+I+TYN ++ +L + L++EM S PD T N +
Sbjct: 167 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 226
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A ++++ M G +P+V+ + LMDG +D FD M +K C
Sbjct: 227 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 286
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+ +V+ Y +I Y ++KA LF+ M + PN TYN++I G C G+ +A +
Sbjct: 287 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 346
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM +RG P+ + Y TL L L +A +++
Sbjct: 347 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK 384
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 13/286 (4%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + F L+ + ++ V+ + F P + N ++++ +R+
Sbjct: 578 PPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFS 637
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++ G+ PD++TY +M L +M G SPD TYN L+H L
Sbjct: 638 VLAKLLKLGFQPDVVTYGTLMNG-------------LCKMITKGISPDIFTYNSLIHALC 684
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ LLN M P+V+ F+T++D L + G + D M +G PDVV
Sbjct: 685 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 744
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ + E+++A +FD M+ KG +PNV +YN +I G+C + D+A ++++M
Sbjct: 745 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 804
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G + + YNTL+ L + G+L A + MV G+ LV+
Sbjct: 805 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVT 850
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++ T N ++ C G V A VV+ I + P +YNA++
Sbjct: 211 MVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV---EPNVVTYNALMDGHCL 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V+ M + ++++YN ++ ++ +D+ L +EM R +P+ T
Sbjct: 268 RNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L + A++L + M G P ++ + TL D L + +LD +
Sbjct: 328 YNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIE 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ YT ++ AGELE A+DLF + +KG PNV+TYN MI G C G
Sbjct: 388 GSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLA 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + EM GC+PN YN + + E++ M+ +G
Sbjct: 448 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 495
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 132/278 (47%), Gaps = 19/278 (6%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T NILI C +G A V+ + +K F+P +Y +++ L
Sbjct: 611 GIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLK---LGFQPDVVTYGTLMNGLC----- 662
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+M +G +PDI TYN ++ A L + LL+EM S P+ ++ +
Sbjct: 663 --------KMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 714
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A ++++ M + G +P V+ +T LMDG +D FD M +KGC
Sbjct: 715 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 774
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P+V Y ++I Y ++KA L + M +G + + TYN++I G C G+ A
Sbjct: 775 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 834
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ EM + G P+ + Y L+ L LAEA +++
Sbjct: 835 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLK 872
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 138/291 (47%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T I+I C V A + + +K +P ++ ++ L +
Sbjct: 75 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILK---LGHQPDATTFTTLIRGLCVEGKI 131
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M EG+ P+++TY ++ + ++ + + EM G SP+ TYN L
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L K + L+N M + P V T++D L + G + D M ++G
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV Y ++ + E++ A +FD M+ K + NV +YN++I G+C D+A
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 311
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +EM + PN + YNTL+ L + G+L +A + MV +G+ LV+
Sbjct: 312 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 362
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 8/273 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
MI G T+N L+ C EV +A KV + + K + N SYN +++
Sbjct: 246 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI----SYNTLINGYC 301
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
I+ +++++MS + P+ +TYN ++ +G+L L EM G PD
Sbjct: 302 KIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLV 361
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L L K A+ LL ++ +DP + +TT++DG+ RAG L+ + F +
Sbjct: 362 TYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 421
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++KG P+V Y +MI G L +A LF M G PN TYN + RGF +
Sbjct: 422 SSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEA 481
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+++EM +RG + + LV L + G
Sbjct: 482 LRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 112/225 (49%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M + P + +N ++ + + L +M G PD +T I+++ L
Sbjct: 33 FNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCH 92
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
++ A + L + ++G P FTTL+ GL G + + FD+M +G P+VV
Sbjct: 93 LNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVT 152
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I ++ +A ++F MITKG PN+ TYNS+I G C ++ T+M EM
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ NT+V L G +AEAH+V+ M+ +G ++V+
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 6/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+N LI C E ++ + SK+ P ++ ++ AL
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIM---PNVVVFSTVVDALCK 720
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V M G PD++TY +M ++D+ ++ D M G P+ +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL++ + + A+ LL M G + + TL+ GL G L F EM
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +PD+V Y +++ L +A L + ++ YN I G C AG+ +
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
A + + S+G P+ YN ++ L G L EA+++ R M E +
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIW 950
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 119/252 (47%), Gaps = 4/252 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N +L ++ + + + + +QM G PD+ T IV+ + L ++D
Sbjct: 43 PSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSA 102
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M GF P+V+ + TL++GL +
Sbjct: 103 LAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCK 162
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ F EM KG P++V Y +I E + L + M+ +P+VFT
Sbjct: 163 DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFT 222
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN--LRNAGKLAEAHEVIRH 280
N+++ C G EA ++ M RG PN + YN L+ LRN +A +V
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV--KVFDT 280
Query: 281 MVEKGKYIHLVS 292
MV K +++S
Sbjct: 281 MVHKDCVANVIS 292
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 130/337 (38%), Gaps = 71/337 (21%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GE+ AR + L +P +YN ++H L ++ +M+ G
Sbjct: 405 MCRAGELEDARDLFSNLSSKGL---QPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD------- 129
+P+ TYN++ R + + LL+EM GFS D T +L+ +L
Sbjct: 462 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 521
Query: 130 ---KPLA------------------------------------ALNLLNHMKEVGFDPSV 150
KP + AL+ N M + PS
Sbjct: 522 ILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPST 581
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ FT L+ +++ + +M + G PDV ++I S+ L A +
Sbjct: 582 VDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAK 641
Query: 211 MITKGQLPNVFTYNSMIRGFC-MAGK---------------------FDEACTMMKEMES 248
++ G P+V TY +++ G C M K + T++ EM +
Sbjct: 642 LLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 701
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN +V++T+V L G +A AH+V+ M+++G
Sbjct: 702 SKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 738
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+ N M PS + F L+ +++ + +M + G PDV ++I
Sbjct: 29 ALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVIN 88
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
S ++ A ++ G P+ T+ ++IRG C+ GK EA + +M G P
Sbjct: 89 SLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQP 148
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N + Y TL++ L ++ EA + M+ KG ++V+
Sbjct: 149 NVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVT 187
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 137/322 (42%), Gaps = 41/322 (12%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+ GF +N LI C G++ LA V ER + P +Y ++
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM---DVNGCSPNVRTYTELISGFCKS 260
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R+ ++ +M D G P+++TY ++ + G+LD +RLL M SG P+ T
Sbjct: 261 RKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTC 320
Query: 119 NILLHVLGK----GDKPL-------------------------------AALNLLNHMKE 143
++L+ L K G+ L AA L+ +
Sbjct: 321 SVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVS 380
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
GF P +++L+DGL R L D+M KG P V YT++I + +
Sbjct: 381 QGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADG 440
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
++ + D MI G P+VFTY +R +C G+ ++A MM M G PN + YN L+
Sbjct: 441 SKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALIC 500
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
N G ++A +HMV G
Sbjct: 501 GYANLGLTSQAFSTFKHMVANG 522
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 133/281 (47%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TA T+ L+ G+ R+ + F + P + Y ++H L G + +
Sbjct: 137 GCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREA 196
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + EG+ P+++ YN ++ +G L+ + + M +G SP+ TY L+
Sbjct: 197 ETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISG 256
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K K A+ L + M + G P+V+ +T L+ G G LD M N G +P+
Sbjct: 257 FCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPN 316
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V+I + + +AQ L +I KG N Y S+I G C AG+F A +M+
Sbjct: 317 EWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQ 376
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ S+G P+ Y++L+ L +L+EA V+ M+EKG
Sbjct: 377 TLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 138/294 (46%), Gaps = 8/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ LI C+ G++ A ++++ S L P + + + ++ AL
Sbjct: 273 MVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLV---PNEWTCSVLIDALCK 329
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +G + + Y ++ + G+ RL+ + GF PD HT
Sbjct: 330 HERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHT 389
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ L + + A+ +L+ M E G PS + +T ++D L R D K D+M
Sbjct: 390 YSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMI 449
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDV YT+ + SY G +E A+ + M+ G PN+ TYN++I G+ G
Sbjct: 450 AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTS 509
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL--RNAGKLAEAHEVIRHMVEKGKYIH 289
+A + K M + GC PN Y L+ L + + A+ V + + KY+H
Sbjct: 510 QAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLH 563
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 106/244 (43%), Gaps = 4/244 (1%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
NA L AL R +E +M A ++ TY ++ A G L R L + R
Sbjct: 45 NAFLMALARHRMLADMESFASRMP----ARNLRTYTTLINAYCLAGDLPASKRHLSSLLR 100
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+GF+PD H Y + + A L M G + +T L+ GL AG +
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
F M GC PD Y M+ AG +A+ L + +G PNV YN++I
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
G+C G + A + + M+ GC+PN Y L+S + KL A + MV+ G
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280
Query: 289 HLVS 292
++V+
Sbjct: 281 NVVT 284
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+APD Y + R G L RL M G TY LLH L A
Sbjct: 102 GFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREA 161
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+++ M+ G P + T++ GL AG + + +G P+VV Y +I
Sbjct: 162 MSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDG 221
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
Y G+LE A D+F+ M G PNV TY +I GFC + K D A + M G PN
Sbjct: 222 YCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPN 281
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y L+ + G+L A+ +++ M G
Sbjct: 282 VVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 137/322 (42%), Gaps = 34/322 (10%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G + LI C G A ++++ + F P ++Y++++ L
Sbjct: 343 LIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ---GFVPDAHTYSSLIDGL-- 397
Query: 58 IRQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
RQ +L E V M ++G P +TY I++ R D ++LD+M +G PD
Sbjct: 398 CRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDV 457
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY I + + A +++ HM + G P+++ + L+ G + G F
Sbjct: 458 FTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKH 517
Query: 176 MANKGCMPDVVCYTVMI----------------TSYIAAGELEKAQDLFDGMITKGQLPN 219
M GC P+ YTV++ S E++ L + M+ K QLP+
Sbjct: 518 MVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMV-KLQLPS 576
Query: 220 -VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ YN + C + DEA ++ EM+S P+ VY ++++ L EA +
Sbjct: 577 EIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV 636
Query: 279 RHMVEKG------KYIHLVSKF 294
MV+ G Y H++S
Sbjct: 637 DSMVKSGYIPQLESYRHIISSL 658
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 99/211 (46%), Gaps = 13/211 (6%)
Query: 100 HRLLDEM---GRSGFSPDFHTYNILLHVLG-KGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
HR+L +M + + TY L++ GD P A+ L+ + GF P +T+
Sbjct: 54 HRMLADMESFASRMPARNLRTYTTLINAYCLAGDLP-ASKRHLSSLLRAGFAPDSHAYTS 112
Query: 156 LMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+ G RAG L AC+ F M +GC+ YT ++ AG + +A +F GM
Sbjct: 113 FVVGYCRAGLLAHACRLFV-LMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQAD 171
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+ Y +M+ G C AG+ EA T++ + + G PN +VYN L+ N G L A
Sbjct: 172 GCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELA 231
Query: 275 HEVIRHMVEKG------KYIHLVSKFKRYKR 299
+V M G Y L+S F + ++
Sbjct: 232 VDVFERMDVNGCSPNVRTYTELISGFCKSRK 262
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 124/303 (40%), Gaps = 22/303 (7%)
Query: 1 MIENGFPTTARTFNILICT-CGEVGL--ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G + T+ I+I EVG ++K++++ I + +P +Y + +
Sbjct: 413 MMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAA---GIKPDVFTYTIFVRSYCH 469
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E + M D G P+++TYN ++C LG Q M +G P+ +
Sbjct: 470 EGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEES 529
Query: 118 YNILLHVLGKGDK----PLAALN------------LLNHMKEVGFDPSVLHFTTLMDGLS 161
Y +LL +L K + P +++ LL M ++ + + + L
Sbjct: 530 YTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLC 589
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R LD K EM + P YT +I L +A D M+ G +P +
Sbjct: 590 RVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLE 649
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+Y +I C G A + +M S+ N + + L+ L G +AE ++ M
Sbjct: 650 SYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVM 709
Query: 282 VEK 284
EK
Sbjct: 710 EEK 712
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 111/273 (40%), Gaps = 19/273 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G T+N LIC +GL + F +P + SY +L L
Sbjct: 483 MVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLL----- 537
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ S+ A + + +++ ++ H LL+EM + + YN
Sbjct: 538 ------IKKESSNNIPANSV--------SIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNC 583
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L L + D+ A LL M+ PS +T+++ R L F D M G
Sbjct: 584 FLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSG 643
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P + Y +I+S G ++ A+ +F M++K + +I G G E
Sbjct: 644 YIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECS 703
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+++ ME + P+ +Y L + +A + E
Sbjct: 704 SLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 130/281 (46%), Gaps = 1/281 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF TFN++I G V + + S + + +YN ++ ALL +
Sbjct: 269 GFSLNDVTFNVVISFLAREGHLENAV-KLVDSMRLSKKASSFTYNPLITALLERGFVRKA 327
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E + +M +EG P ++TYN ++ + + + EM G PD TYN LL+
Sbjct: 328 EALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNR 387
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K AL LL ++ G P+VL + TL+DG R G+L + +EM +GC PD
Sbjct: 388 YCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPD 447
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V YT+++ L A++ FD M++KG P+ F YN+ I A + +
Sbjct: 448 VCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLRE 507
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M +G P+ + YN ++ L G L +A + MV G
Sbjct: 508 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDG 548
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 119/284 (41%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N LI C G++ AR++ E ++ F P +Y +++ +R
Sbjct: 408 GLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCF---PDVCTYTILMNGSRKVRNL 464
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M +G PD YN +CA+ L +L + M G PD TYN++
Sbjct: 465 AMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVI 524
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A L M G P + +T L+ G L + + M + G
Sbjct: 525 IDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV YT+++ + G L A F M+ G PN TYN +I CM G+ A
Sbjct: 585 QPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFR 644
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM RG PN Y L+ G A+A + M + G
Sbjct: 645 HFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNG 688
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 132/286 (46%), Gaps = 9/286 (3%)
Query: 1 MIENG-FPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
M+E G FP T+ IL+ +V +AR+ + + L +P +YN + A L
Sbjct: 439 MVEQGCFPDVC-TYTILMNGSRKVRNLAMAREFFDEMLSKGL---QPDCFAYNTRICAEL 494
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + + + M +G PD +TYN+++ + G L RL +M G PD
Sbjct: 495 TLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCI 554
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L+H + A LLN M G PSV+ +T L+ R GNL + +F +M
Sbjct: 555 TYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKM 614
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ G P+ + Y V+I + G A F M+ +G PN +TY +I G C G +
Sbjct: 615 LDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNW 674
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+A + EM G P++ +N L + G + A E + ++V
Sbjct: 675 ADAIRLYFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENIV 719
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 88/247 (35%), Gaps = 71/247 (28%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
G +PD N +L VL + + M ++ +P+++ + TL+D + G D
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256
Query: 170 KYFFDEMANKG---CMPDVV---------------------------------CYTVMIT 193
EM +G + DV Y +IT
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYNPLIT 316
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG------------------------ 229
+ + G + KA+ L M +G +P V TYN++I G
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376
Query: 230 -----------FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+C AG EA ++ ++ G P L YNTL+ G LAEA +
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436
Query: 279 RHMVEKG 285
MVE+G
Sbjct: 437 EEMVEQG 443
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
C F + G PDV ++ A + + ++ M+ P + TYN+++
Sbjct: 186 CLAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLD 245
Query: 229 GFCMAGKFDEACTMMKEMESRGC--NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
F G+ DEA ++KEME++G + N + +N ++S L G L A +++ M
Sbjct: 246 SFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM 300
>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g32630-like [Glycine max]
Length = 619
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V A + + I + P ++ A++ + Q + E + ++M +G
Sbjct: 298 CRAGNVRRASALFDEMICRGIV---PNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVD 354
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+++ +N +M + G +D+ RL D M R GF D TYNIL L K + A +
Sbjct: 355 LNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRV 414
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
LN M E G P+V+ T ++ + GNL + F + +G +P++V Y +I +Y
Sbjct: 415 LNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSK 474
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
++++A L M+ KG LP+VFTY S+I G C+ K DEA + EM +G N
Sbjct: 475 NEKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKT 534
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y ++S L G+ EA ++ M+ G
Sbjct: 535 YTAIISGLSKEGRADEALKLYDEMMRMG 562
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 136/305 (44%), Gaps = 38/305 (12%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA------------LLGIRQYK- 62
++C GEVG A++++ + P +YN +L+A +LG+ + +
Sbjct: 191 VLCRRGEVGRAKELMNEMAARGVV---PTVFTYNTLLNACVVRKDREGVDEILGLMEREG 247
Query: 63 ----------LIEW------------VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
LIEW VY++M + D+ Y ++ R G + +
Sbjct: 248 VVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRAS 307
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L DEM G P+ T+ L+ + K + AA LL M+ G D +V+ F T+MDG
Sbjct: 308 ALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGY 367
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G +D D M KG DV Y ++ + E+A+ + + M+ KG PNV
Sbjct: 368 CKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNV 427
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T + I +C G E ++ +E RG PN + YNTL+ K+ +AH +
Sbjct: 428 VTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAE 487
Query: 281 MVEKG 285
MVEKG
Sbjct: 488 MVEKG 492
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 110/219 (50%), Gaps = 1/219 (0%)
Query: 68 YQQMSDEGYAP-DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++M + G + + IV+ R G++ + L++EM G P TYN LL+
Sbjct: 169 FRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACV 228
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+L M+ G S++ +T L++ + + + + ++EM + DV
Sbjct: 229 VRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVY 288
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT MI+ AG + +A LFD MI +G +PN T+ ++I G C AG+ + A +++EM
Sbjct: 289 VYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEM 348
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +G + N +++NT++ G + EA + M KG
Sbjct: 349 QCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKG 387
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 82/201 (40%), Gaps = 36/201 (17%)
Query: 127 KGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K +K + M E G D V T ++D L R G + K +EMA +G +P V
Sbjct: 158 KCNKVELCVRFFRRMVESGRVDIGVQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTV 217
Query: 186 -----------------------------------VCYTVMITSYIAAGELEKAQDLFDG 210
V YT++I Y ++ + +A+ +++
Sbjct: 218 FTYNTLLNACVVRKDREGVDEILGLMEREGVVASLVTYTILIEWYASSERIGEAEKVYEE 277
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M + +V+ Y SMI C AG A + EM RG PN + L+S + AG+
Sbjct: 278 MCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQ 337
Query: 271 LAEAHEVIRHMVEKGKYIHLV 291
+ A ++ M KG +++V
Sbjct: 338 MEAAEILLEEMQCKGVDLNVV 358
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Query: 1 MIENGF-PTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGI 58
M+E G P + C E LA ERF+++ + P +YN ++ A
Sbjct: 418 MVEKGVAPNVVTCATFIEIYCQEGNLAEP--ERFLRNIEKRGVVPNIVTYNTLIDAYSKN 475
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ K + +M ++G PD+ TY ++ + + K+D+ +L +EM G + TY
Sbjct: 476 EKVKQAHXLKAEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTY 535
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
++ L K + AL L + M +G P F L+ L + + A K
Sbjct: 536 TAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHKPSSHAALK 587
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 145/277 (52%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNIL+ C G+V A+ V+ +K + +P +YN+++ I + + ++
Sbjct: 273 TFNILVDGFCKEGKVNDAKVVLAIMMKD---DIKPDVVTYNSLMDGYCSINKVNKAKDIF 329
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+ G ++ Y ++ ++ +D+ L +EM P+ TY+ L+ L K
Sbjct: 330 DSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKL 389
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ AL L++ M + G P+++ +++++D L + ++D + ++G PD+ Y
Sbjct: 390 GRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTY 449
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I +G LE AQ++F+ ++ KG +V+ Y MI+GFC G FD+A ++ +ME
Sbjct: 450 TILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMED 509
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN Y ++ +L + A +++R M+ +G
Sbjct: 510 NGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 143/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+ TA TFN LI C G + A ++ + F + SY +++ L
Sbjct: 122 ILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQ---GFHLDQVSYGTLINGLCK 178
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +++ + P+ + YN+++ + ++ L +M PD T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K A++L N MK+ +P+V F L+DG + G ++ K M
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMM 298
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PDVV Y ++ Y + ++ KA+D+FD M + G + NV Y +M+ GFC D
Sbjct: 299 KDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVD 358
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA + +EM R PN + Y++L+ L G++ A +++ M ++G+ ++V+
Sbjct: 359 EAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVT 413
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 143/288 (49%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ LI C G + A ++++R + KL +P YN I+ +
Sbjct: 157 VVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKR-VDGKLV--QPNAVMYNMIIDNMCK 213
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y QM + PD+ TYN ++ + KL+ L ++M + +P+ +T
Sbjct: 214 AKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYT 273
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ K K A +L M + P V+ + +LMDG ++ K FD MA
Sbjct: 274 FNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMA 333
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G + +V YT M+ + +++A +LF+ M + +PNV TY+S+I G C G+
Sbjct: 334 SGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIF 393
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EM RG PN + Y++++ L + +A ++ ++ ++G
Sbjct: 394 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 117/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNA++ + + ++ +M E P++ T+NI++ + GK++ +L M
Sbjct: 238 TYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIM 297
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ PD TYN L+ +K A ++ + M G +V +TT+++G + +
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F+EM + +P+VV Y+ +I G + A L D M +GQ PN+ TY+S+
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSI 417
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C D+A ++ ++ +G P+ Y L+ L +G+L +A V ++ KG
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 114/244 (46%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +N IL +L+ + + ++QQM G D T+NI++ +LG
Sbjct: 56 NPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLS 115
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+ ++ + G+ P T+N L+ L AL+ + + GF + + TL++G
Sbjct: 116 FSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLING 175
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G + A + K P+ V Y ++I + A + A DL+ M+ K P+
Sbjct: 176 LCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPD 235
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
VFTYN++I GF K + A + +M+ NPN +N LV GK+ +A V+
Sbjct: 236 VFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLA 295
Query: 280 HMVE 283
M++
Sbjct: 296 IMMK 299
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 122/255 (47%), Gaps = 13/255 (5%)
Query: 34 IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAK 90
I+S F F N ++ LG+ ++ ++ +GY P +T+N + +C K
Sbjct: 92 IESDFFTFNILINCFSQ-----LGLNSLSF--SIFAKILKKGYHPTAITFNTLIKGLCLK 144
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ + FH D++ GF D +Y L++ L K + AAL LL + P+
Sbjct: 145 GHIHQALHFH---DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNA 201
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + ++D + +A ++ + +M K PDV Y +I+ + A +L A DLF+
Sbjct: 202 VMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNK 261
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M + PNV+T+N ++ GFC GK ++A ++ M P+ + YN+L+ + K
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321
Query: 271 LAEAHEVIRHMVEKG 285
+ +A ++ M G
Sbjct: 322 VNKAKDIFDSMASGG 336
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 96/217 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G + + ++ ++ + + + F + + P +Y++++ L + +
Sbjct: 332 MASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR 391
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M D G P+I+TY+ ++ A + +D+ LL + G PD +TY I
Sbjct: 392 IFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTI 451
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A N+ + G++ V +T ++ G G D +M + G
Sbjct: 452 LIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNG 511
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
C+P+ Y ++I S E + A+ L MI +G L
Sbjct: 512 CIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 78/173 (45%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+P +N +L L K AL+L M+ G + F L++ S+ G
Sbjct: 58 TPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFS 117
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F ++ KG P + + +I G + +A D ++ +G + +Y ++I G C
Sbjct: 118 IFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLC 177
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G+ A ++K ++ + PN ++YN ++ N+ A + +A ++ MV K
Sbjct: 178 KVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230
Score = 37.4 bits (85), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 62/147 (42%), Gaps = 2/147 (1%)
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F S+ F+ L NL + F + +K P + +++S + A A
Sbjct: 24 FPSSIRLFSQLHHKQDEENNLISS--FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTAL 81
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L M G + FT+N +I F G + ++ ++ +G +P + +NTL+ L
Sbjct: 82 SLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGL 141
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + +A +V +G ++ VS
Sbjct: 142 CLKGHIHQALHFHDKVVAQGFHLDQVS 168
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 128 FNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVD 247
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A L D M KG P+ TY ++I
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 307
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + +VY L+S L G +A +++R M+ G
Sbjct: 308 DGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREMLSVG 365
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 172
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 173 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVT 232
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 292
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G
Sbjct: 293 MKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSV 352
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 353 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 407
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+++LI C ++ A ++ + + L P ++ ++
Sbjct: 186 MLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLV---PNSVTFTTLIDGHCK 242
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD T
Sbjct: 243 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKIT 302
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K A M + + +T L+ GL R G + EM
Sbjct: 303 YTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREML 362
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ G PD YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 363 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 128/243 (52%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L ++ ++ Y + + QM G P++ T NI++ + L ++ +
Sbjct: 43 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L ++ + G PD T+ L+ L K AL+L + M + GF P+V+ + TL++GL +
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN A M C PDVV YT +I S ++ +A +LF M+ +G P++FT
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S++ C ++ T++ +M + P+ ++++T+V L GK+ EAHE++ M+
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282
Query: 283 EKG 285
++G
Sbjct: 283 QRG 285
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 139/300 (46%), Gaps = 12/300 (4%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G P T NILI C VG A V+ + +K +P ++ ++ L +
Sbjct: 75 GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILK---LGHQPDPTTFTTLIRGLCVEGKI 131
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +M DEG+ P+++TY ++ ++G RLL M + PD Y +
Sbjct: 132 GEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSI 191
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + A NL + M G P + +T+L+ L ++M N
Sbjct: 192 IDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKI 251
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+PDVV ++ ++ + G++ +A ++ D MI +G P+V TY +++ G C+ + DEA
Sbjct: 252 LPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVK 311
Query: 242 MMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHMVE-----KGKYIHLVSKFK 295
+ M +G P+ + Y TL+ + ++ G L EVI + E KG + ++ K K
Sbjct: 312 VFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDK 371
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 141/305 (46%), Gaps = 15/305 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ GF T+ LI +VG + + N +P Y +I+ +L RQ
Sbjct: 141 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 200
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ QM +G +PDI TY ++ A L + LL++M S PD ++
Sbjct: 201 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 260
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A +++ M + G +P V+ +TTLMDG +D FD M KG
Sbjct: 261 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 320
Query: 181 CMPDVVCYTVMITS-YIAAGELEKAQDLFDGMI------TKGQLPNVFTYNSMIRGFCMA 233
PDV+ YT +I + G L Q++ G++ KG V + M
Sbjct: 321 FAPDVISYTTLINAGKKDGGGLVSLQEVI-GLVKETPDAVKGGAVEVIRKDKM------- 372
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
F++ T++ EM + PN ++++T+V L GK+ EAH+V+ M+++G + V
Sbjct: 373 KLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKV 432
Query: 294 FKRYK 298
F K
Sbjct: 433 FDTMK 437
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 126/279 (45%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + F L+ + ++ V+ + F P + N ++++ + +
Sbjct: 42 PPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFS 101
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++ G+ PD T+ ++ GK+ + L D+M GF P+ TY L++ L
Sbjct: 102 VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLC 161
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AA+ LL M++ P V+ +T+++D L + + F +M +G PD+
Sbjct: 162 KVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIF 221
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT ++ + E + L + M+ LP+V +++++ C GK EA ++ M
Sbjct: 222 TYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMM 281
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG P+ + Y TL+ ++ EA +V MV KG
Sbjct: 282 IQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 320
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L F+RLL P + LL + K L+L M G P+V
Sbjct: 30 LSSFNRLL----HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ + ++ G PD +T +I G++ +A LFD MI +G
Sbjct: 86 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
PNV TY ++I G C G A +++ ME C P+ ++Y +++ +L ++ EA
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205
Query: 276 EVIRHMVEKG 285
+ MV +G
Sbjct: 206 NLFSQMVGQG 215
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+FH+ ++ + L D L++ N L HM PS++ F L+ +++ +
Sbjct: 15 NFHSKSLHFNTL---DDALSSFNRLLHMHP---PPSIVDFAKLLTSIAKMKHYSTVLSLS 68
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+M + G P+V ++I S+ + A + ++ G P+ T+ ++IRG C+
Sbjct: 69 TQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVE 128
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK EA + +M G PN + Y TL++ L G + A ++R M E+G
Sbjct: 129 GKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQG 179
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 132/265 (49%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G KV++ + + P + +Y +++ I Q + E + M +G +
Sbjct: 87 GTCGGPPKVLDECVGN---GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQ 143
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ +N ++ R G +D ++ M + G D +TYN L L + ++ A LL+
Sbjct: 144 IIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHI 203
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M E+G P+ + +TTL+ + G++ + F EMA KG P VV Y VMI Y G
Sbjct: 204 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGS 263
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A+ M KG +P+V+TY S++ G C+ GK D A + +EM+ RG PN + Y
Sbjct: 264 IREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTA 323
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+S L G+ A ++ M++ G
Sbjct: 324 LISGLAKEGRSEAAFQLYDDMLKAG 348
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 122/273 (44%), Gaps = 18/273 (6%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERF------IKSKLFNFRPFKNSYNAIL 52
+ NG RT+ +LI C G++ A ++ + +FN ++
Sbjct: 100 VGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMV 159
Query: 53 HALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
L I+ M G DI TYN + C R+ +LD+ LL M G
Sbjct: 160 DDALKIKA---------AMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVV 210
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P++ TY L+ + K + A L M E G PSV+ + ++ G ++ G++ + F
Sbjct: 211 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERF 270
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
EM KG +PDV Y ++ + G+++ A LF+ M +G PNV Y ++I G
Sbjct: 271 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 330
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
G+ + A + +M G P+ +Y+ LV +L
Sbjct: 331 EGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 363
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 108/231 (46%), Gaps = 6/231 (2%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G P+ TY +++ ++G+++ LL +M G + +N ++ + A
Sbjct: 103 GVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDA 162
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L + M+++G + + + TL GL R LD K M G +P+ V YT +I+
Sbjct: 163 LKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISI 222
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ G++ +A+ LF M KG P+V TYN MI G+ G EA KEME +G P+
Sbjct: 223 HCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPD 282
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
Y +LV GK+ A ++ M ++G Y L+S + R
Sbjct: 283 VYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGR 333
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 24/236 (10%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL--HVLGKGDKPLAAL--- 135
L ++V+ + G++D RLLD+M R G S + YN LL +V K D + +
Sbjct: 15 LAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEI 74
Query: 136 -------------------NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
+L+ G +P+ + L++G + G ++A + +M
Sbjct: 75 MENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM 134
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G + + + MI Y G ++ A + M G +++TYN++ G C +
Sbjct: 135 QGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRL 194
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEA T++ M G PN++ Y TL+S G + EA + R M EKG +V+
Sbjct: 195 DEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVT 250
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 72/161 (44%), Gaps = 24/161 (14%)
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
S L + ++DGL ++G +D + D+M G + +CY ++ Y+ + + Q++
Sbjct: 13 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 72
Query: 209 DGM------------------------ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ M + G PN TY +I GFC G+ + A ++
Sbjct: 73 EIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 132
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M+ +G N +++NT++ G + +A ++ M + G
Sbjct: 133 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMG 173
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+ LI C G++ AR++ + P +YN ++H
Sbjct: 204 MIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEK---GATPSVVTYNVMIHGYAK 260
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E ++M +G+ PD+ TY ++ GK+D +L +EM + G P+
Sbjct: 261 KGSIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVA 320
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
Y L+ L K + AA L + M + G P ++ L+ L
Sbjct: 321 YTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 363
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T NILI C V L V+ + IK +P ++ +++ L ++
Sbjct: 121 GLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIK---LGLQPTIITFTTLINGLCKAGEF 177
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ M G PD+ TY ++ ++G+ L+ +MG G PD TY+ L
Sbjct: 178 AQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTL 237
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K AL++ ++MK G P+V+ +T+L+ GL +EM +
Sbjct: 238 IDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNI 297
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
MPD+V ++++I + G + +AQ + M G PNV TYNS++ G+ + + EA
Sbjct: 298 MPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARK 357
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M +RGC P+ Y+ L++ ++ EA ++ M+ +G + VS
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVS 408
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G T TF LI C GE A ++ + + +P +Y I++ L
Sbjct: 152 VIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR---GCQPDVYTYTTIINGLCK 208
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M + G PD++TY+ ++ + + +++ + M G SP +
Sbjct: 209 MGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVS 268
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + A +LN M + P ++ F+ L+D + GN+ + M
Sbjct: 269 YTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMT 328
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V+ Y ++ Y E+ +A+ LFD MIT+G P+VF+Y+ +I G+CM + D
Sbjct: 329 EMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRID 388
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + EM +G PN + Y TL+ GKL EA E+ + M G
Sbjct: 389 EAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNG 436
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T++ LI + + L + ++ F K P SY +++ L +
Sbjct: 222 MGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSR 281
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + +M+ PDI+T+++++ + G + + +L M G P+ TYN
Sbjct: 282 WKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNS 341
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H + + A L + M G P V ++ L++G +D K F+EM ++G
Sbjct: 342 LMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQG 401
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V YT +I ++ G+L +A++LF M T G LP++ TY+ ++ GFC G +A
Sbjct: 402 LTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAF 461
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M+ PN ++Y L+ ++ +G L A ++ + G
Sbjct: 462 RLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHG 506
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 1/244 (0%)
Query: 43 PFKNSYNAILHALLGIRQY-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P +N +L A++ +RQY + + +QM G +P+ T NI++ + +D
Sbjct: 88 PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+L ++ + G P T+ L++ L K + AL L + M G P V +TT+++GL
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G A +M GC PDVV Y+ +I S + +A D+F M KG P V
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVV 267
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+Y S+I+G C ++ EA M+ EM S P+ + ++ L+ G + EA V++ M
Sbjct: 268 SYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTM 327
Query: 282 VEKG 285
E G
Sbjct: 328 TEMG 331
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 10/279 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW-- 66
TF++LI C G V A+ V++ + P +YN+++H Q +++E
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTE---MGVEPNVITYNSLMHGY--SLQMEVVEARK 357
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M G PD+ +Y+I++ + ++D+ +L +EM G +P+ +Y L+H
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ K A L M G+ P + ++ L++G + G L F M P++V
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT++I S +G L A+ LF + G P+V Y ++I G C G DEA ++M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E GC PN YN ++ + A ++I M +KG
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKG 576
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 85/222 (38%), Gaps = 41/222 (18%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G +++ILI C + A+++ I L P SY ++HA
Sbjct: 362 MITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL---TPNTVSYTTLIHAFCQ 418
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +++ M GY PD+ TY++++ + G L + RL M + P+
Sbjct: 419 LGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVM 478
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF---- 173
Y IL+ + K A L + + G P V +TT+++GL + G LD F
Sbjct: 479 YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKME 538
Query: 174 -------------------------------DEMANKGCMPD 184
EM +KG + D
Sbjct: 539 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 125/257 (48%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
V+ F + ++ P + N ++H + Q +M G+ PD++T+ ++
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+++ L D++ GF P+ TY L+ L K A+ L N M G P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V+ + L+ GL G + +M + P+V+ +T +I +++ G+L +A++L+
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ MI P+VFTY S+I G CM G DEA M ME GC PN ++Y TL+ +
Sbjct: 282 NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 269 GKLAEAHEVIRHMVEKG 285
++ + ++ M +KG
Sbjct: 342 KRVEDGMKIFYEMSQKG 358
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 121/249 (48%), Gaps = 1/249 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F R F +SY IL L Q+ ++ +M P I+ + ++ ++ + D
Sbjct: 43 FWIRAF-SSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDV 101
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L ++M G P T NI++H + +P A L M ++GF+P ++ FT+L++
Sbjct: 102 VISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLN 161
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G ++ FD++ G P+VV YT +I L A +LF+ M T G P
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRP 221
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV TYN+++ G C G++ +A ++++M R PN + + L+ GKL EA E+
Sbjct: 222 NVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELY 281
Query: 279 RHMVEKGKY 287
M++ Y
Sbjct: 282 NVMIQMSVY 290
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 121/252 (48%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F+P +Y ++ L R ++ QM G P+++TYN ++ +G+
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL +M + P+ T+ L+ K K + A L N M ++ P V + +L++GL
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G LD + F M GC P+ V YT +I + + +E +F M KG + N
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANT 363
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY +I+G+C+ G+ D A + +M SR P+ YN L+ L GK+ +A + +
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEY 423
Query: 281 MVEKGKYIHLVS 292
M ++ I++V+
Sbjct: 424 MRKREMDINIVT 435
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG T+N L+ C G G A ++ +K ++ P ++ A++ A +
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRI---EPNVITFTALIDAFVK 270
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +Y M PD+ TY ++ G LD+ ++ M R+G P+
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+H K + + + M + G + + +T L+ G G D + F++M+
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++ PD+ Y V++ G++EKA +F+ M + N+ TY +I+G C GK +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + + S+G PN + Y T++S G + EA + + M E G
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL+L M PS++ FT L+ +++ D F++M G P + +++
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMH 126
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ + +A M+ G P++ T+ S++ G+C + ++A + ++ G P
Sbjct: 127 CVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKP 186
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N + Y TL+ L L A E+ M G ++V+
Sbjct: 187 NVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + +L + V+ ++ G P ++++N ++ RLG LD+ RL M
Sbjct: 139 FNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +T +L++ L K K A L N M + G P+ + FTTL+DG ++G +D
Sbjct: 199 ASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M +G PD++ Y +I G+L++A+DL M KG P+ TY ++I
Sbjct: 259 LALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A + K M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
E G Y +++ F
Sbjct: 379 PENGTYTMIINGF 391
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 137/275 (49%), Gaps = 6/275 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E G R +E F ++ F ++ +L L+ ++ +KL+ Y+++
Sbjct: 69 FSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGD 129
+ GY + +NI+M + G++ + D + + G P ++N L++ LG D
Sbjct: 129 ECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLD 188
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K L M G P V T L++GL + +D F+EM +KG +P+ V +T
Sbjct: 189 K---GFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFT 245
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + +G ++ A +++ M+ +G P++ TYN++I G C G +A ++ EM +
Sbjct: 246 TLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMK 305
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + Y TL+ G L A E+ + M+E+
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEE 340
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+PT+ FNIL+ C GE+ LA+ V + K L RP S+N +++ +
Sbjct: 127 ILECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGL---RPSVVSFNTLINGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ T +++ + K+D+ + L +EM G P+ T
Sbjct: 184 LGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + AL + M G+ P ++ + TL+ GL R G+L + EM+
Sbjct: 244 FTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A +L MI + + Y ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++EM S G P Y +++ G + A ++++ M G
Sbjct: 364 DAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDG 411
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 77/187 (41%), Gaps = 35/187 (18%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM +GY+PD++TYN ++ R G L Q L+ EM G PD TY
Sbjct: 263 IYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITY-------- 314
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
TTL+DG + G+L+ M + D V
Sbjct: 315 ---------------------------TTLIDGSCKEGDLETAFELRKRMIEESIRLDDV 347
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I+ G A+ + M++ G P TY +I GFC G A ++KEM
Sbjct: 348 AYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEM 407
Query: 247 ESRGCNP 253
+ G P
Sbjct: 408 QRDGHVP 414
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V LA ++ ++ ++ + P +YN +++ L
Sbjct: 232 MLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQ---GYSPDLITYNTLIYGLCR 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +MS +G PD +TY ++ + G L+ L M D
Sbjct: 289 KGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P +T +++G + G++ EM
Sbjct: 349 YTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGHVPCVV 417
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 4/254 (1%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP SY ++ AL R+ + + M D G PD++TY ++ +D
Sbjct: 91 RPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVE 150
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL+EM SG P+ Y+ LLH K + + + M G +P V+ +T L+D L
Sbjct: 151 LLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC 210
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G + D M +G P+VV Y V+I S G + +A DL M KG P+V
Sbjct: 211 RHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVV 270
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEM---ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
TYN++I G + DEA +++EM E+R P+ + +N+++ L G + +A +V
Sbjct: 271 TYNTLITGLSSVLEMDEAMALLEEMMQGETR-VRPDLMTFNSVIHGLCKIGWMRQALQVR 329
Query: 279 RHMVEKGKYIHLVS 292
M E G +LV+
Sbjct: 330 AMMAENGCRCNLVA 343
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/243 (32%), Positives = 121/243 (49%), Gaps = 9/243 (3%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDE---GYAPDILTYNIVM---CAKYRLGKLDQFH 100
SYN +L AL ++ + MS E P+ ++Y +M CA R Q
Sbjct: 58 SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAA---QAV 114
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL M G PD TY L+ L A+ LLN M E G +P+V+ ++ L+ G
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G ++ F+EM+ +G PDVV YT +I S G+++KA + D M +G PNV
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN +I C G EA + K M +G P+ + YNTL++ L + ++ EA ++
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294
Query: 281 MVE 283
M++
Sbjct: 295 MMQ 297
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 140/287 (48%), Gaps = 5/287 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N LI + E+ A ++E ++ + RP ++N+++H L
Sbjct: 260 MSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGE-TRVRPDLMTFNSVIHGLCK 318
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + V M++ G +++ +N+++ R+ K+ + L+DEM SG PD T
Sbjct: 319 IGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFT 378
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL++ K + A + L+ M+ G +P +H+ L+ + G + + F+EM
Sbjct: 379 YSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM- 437
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++ C D Y+ MI +GE + A++ MI +G +P+ TY+ I F +G
Sbjct: 438 DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLA 497
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A ++K+M + G P+ V+++L+ G + E+ R M K
Sbjct: 498 AAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAK 544
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 3/217 (1%)
Query: 79 DILTYNIVMCAKYRLGKLDQ---FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
D ++YN V+ A R G LD R++ R P+ +Y L+ L + A+
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL M++ G P V+ + TL+ GL A ++D +EM G P+VV Y+ ++ Y
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G E +F+ M +G P+V Y ++I C GK +A +M M RG PN
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ YN L++++ G + EA ++ ++M EKG +V+
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVT 271
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 77/348 (22%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ LI C +V A +++ +S P Y+ +LH +++ + V+
Sbjct: 131 TYGTLIRGLCDAADVDTAVELLNEMCES---GIEPNVVVYSCLLHGYCKTGRWESVGKVF 187
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++MS G PD++ Y ++ + R GK+ + R++D M G P+ TYN+L++ + K
Sbjct: 188 EEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKE 247
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM------------ 176
AL+L +M E G P V+ + TL+ GLS +D +EM
Sbjct: 248 GSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLM 307
Query: 177 -------------------------ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
A GC ++V + ++I + +++KA +L D M
Sbjct: 308 TFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP------------------ 253
+ G P+ FTY+ +I GFC + + A + + EM +G P
Sbjct: 368 ASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427
Query: 254 ----------------NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y+T++ +G+ A E ++ M+++G
Sbjct: 428 GQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEG 475
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 105/268 (39%), Gaps = 37/268 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG FN+LI V +K +E + +P +Y+ +++ +RQ
Sbjct: 332 MAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQ 391
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS----------- 109
+ E +M +G P+ + Y ++ A G + Q L +EM R+
Sbjct: 392 VERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTM 451
Query: 110 -----------------------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
G PD TY+I +++ K AA +L M GF
Sbjct: 452 IHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGF 511
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK-AQ 205
P V F +L+ G G+ + EM K D + ++TS A+ E +K Q
Sbjct: 512 VPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIEGQKLLQ 571
Query: 206 DL--FDGMITKGQLPNVFTYNSMIRGFC 231
L FD I+KG + + +M++ C
Sbjct: 572 SLPGFDTEISKGDVISPHDVMNMLQKHC 599
>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 730
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 3/285 (1%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI--RQ 60
E G+P + LI ++ + F + K +P +YN I+ L G R
Sbjct: 110 EEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIID-LYGKKGRS 168
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ I ++++M +G PD TYN + A ++ L +M S +PD TYN
Sbjct: 169 WENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNA 228
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V GK A N+L M+ G P+++ + L+ RAG +A D M +KG
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG 288
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV YT ++++Y AG++E+A ++++ M T PN FT+N++I F E
Sbjct: 289 IEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMM 348
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M++ G P+ + +N+L+ G +E +V R M + G
Sbjct: 349 VIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAG 393
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 117/263 (44%), Gaps = 2/263 (0%)
Query: 21 GEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
G G K +E F + NFRP + +L L Q + +++ + +EGY D
Sbjct: 57 GREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLD 116
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA-ALNLL 138
+ Y ++ A R K + ++M +G P TYN+++ + GK + L L
Sbjct: 117 VYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELF 176
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
MK G P + T + + + F +M + C PD V Y ++ Y A
Sbjct: 177 EEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKA 236
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G +A ++ M + G LPN+ TYN ++ F AG + A M M S+G P+ Y
Sbjct: 237 GWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTY 296
Query: 259 NTLVSNLRNAGKLAEAHEVIRHM 281
+L+S AGK+ +A E+ M
Sbjct: 297 TSLLSAYSRAGKVEQAMEIYNQM 319
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 130/314 (41%), Gaps = 35/314 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + GF TFNILI G G + + + + P ++N +L AL +
Sbjct: 389 MKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGR 448
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD---------------- 104
++ E + +++ Y P+ + Y ++ A G+L++ ++D
Sbjct: 449 WEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKT 508
Query: 105 -------------------EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
M G+ D T+N ++ + GK A + ++ G
Sbjct: 509 FVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTG 568
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+P V+ + LM R G C+ E G PD+V Y +I SY G+L A
Sbjct: 569 LEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSAT 628
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+F M++ G P+ FTYN+ + + G F EA +++K M GC P+ + Y TLV
Sbjct: 629 RIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAY 688
Query: 266 RNAGKLAEAHEVIR 279
GK E +++
Sbjct: 689 CKIGKFEEVERILK 702
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 135/327 (41%), Gaps = 35/327 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T+ L+ G + +E + + + N P ++NA++ +
Sbjct: 284 MVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKN 343
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +++ M G PDI+T+N ++ A + G + ++ M ++GF PD T+NI
Sbjct: 344 FSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNI 403
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ G+ AL++ + M + G P + F TL+ L+R G + + DE+
Sbjct: 404 LIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSS 463
Query: 181 CMPDVVCYTVMITSYIAAGELEK-----------------------------------AQ 205
P+ + Y M+ +Y GELEK A+
Sbjct: 464 YKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAE 523
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
D F M G L + T+N+MI + G D+A + S G P+ + YN L+
Sbjct: 524 DAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMY 583
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + +R + G+ LVS
Sbjct: 584 GREGMYRKCEATLRECMAAGQTPDLVS 610
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 129/313 (41%), Gaps = 35/313 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N I C L + E F + K N P + +YNA+L
Sbjct: 179 MKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGW 238
Query: 61 YKLIEWVYQQMSD-----------------------------------EGYAPDILTYNI 85
Y V ++M +G PD+ TY
Sbjct: 239 YNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTS 298
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A R GK++Q + ++M S +P+ T+N L+ + GK + + M+ G
Sbjct: 299 LLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACG 358
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+P ++ + +L+ + G F M G PD + ++I +Y G ++A
Sbjct: 359 VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL 418
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++DGM+ G P++ T+N+++ G+++ A ++ E+ PN + Y +++
Sbjct: 419 SIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAY 478
Query: 266 RNAGKLAEAHEVI 278
N G+L + E++
Sbjct: 479 ANGGELEKLKEMV 491
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 129/286 (45%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G + T+N++I G+ G + ++E F + K +P + +YN + A
Sbjct: 143 MKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGS 202
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ ++ QM PD +TYN ++ + G ++ +L EM +G P+ TYN
Sbjct: 203 LCEEATELFTQMKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYN 262
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL G+ AA + + M G +P V +T+L+ SRAG ++ +++M
Sbjct: 263 ELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTS 322
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
C P+ + +I + + +F+ M G P++ T+NS++ F G + E
Sbjct: 323 NCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEV 382
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M+ G P+ +N L+ G +A + M++ G
Sbjct: 383 LKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAG 428
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 127/309 (41%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V++ F K F P K ++N ++ A +Y M
Sbjct: 365 TWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQALSIYDGM 424
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK- 130
G PD+ T+N ++ A R G+ + +LDE+ RS + P+ Y +LH G +
Sbjct: 425 LQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGEL 484
Query: 131 ---------------PLAAL------------NLLNH-------MKEVGFDPSVLHFTTL 156
P + +L++ M+ G+ F +
Sbjct: 485 EKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAM 544
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ + G +D F + + G PDVV Y ++ Y G K + + GQ
Sbjct: 545 ISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQ 604
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ +YN++I + G+ A + EM S G P+ YNT V N G EA
Sbjct: 605 TPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALS 664
Query: 277 VIRHMVEKG 285
V++HM + G
Sbjct: 665 VVKHMHKTG 673
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 103/218 (47%), Gaps = 10/218 (4%)
Query: 92 RLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
R G+ ++ + + M +S F PD T ++L +LG+ + L ++E G+ V
Sbjct: 58 REGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREEGYPLDV 117
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG-ELEKAQDLFD 209
+T+L+ LSR FF++M G P +V Y V+I Y G E +LF+
Sbjct: 118 YAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELFE 177
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKF-DEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M +G P+ +TYN+ I C +G +EA + +M+S C P+ + YN L+ A
Sbjct: 178 EMKAQGIQPDEYTYNTAITA-CASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKA 236
Query: 269 GKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKRC 300
G EA V++ M G Y L+S F R C
Sbjct: 237 GWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLC 274
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 142/290 (48%), Gaps = 6/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF++LI C G+V A+K++E I+ P +Y +++
Sbjct: 263 MVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQ---IGIVPNLFTYTSLIKGFCL 319
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ M +GY PD+++YN+++ + K+++ +L +EM G PD T
Sbjct: 320 VGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKT 379
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+LL L K A L +K + +DGL + G + F+E+
Sbjct: 380 SGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELE 439
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ D+ + +I AG+LE A +LF+ + +G P+ Y+SMI GFC G+ D
Sbjct: 440 SYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVD 499
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+A + ++ME GC+P+ + Y+ L+ + KL + +++ M+EK +
Sbjct: 500 KANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVW 549
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 41/282 (14%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S+N +L L I Y + +Y+QM G PD+LT NI++ + ++++ + +
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM--------- 157
R G+ PD T+ L+ L + + A L M+++G P+V+ + TL+
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNI 212
Query: 158 --------------------------------DGLSRAGNLDACKYFFDEMANKGCMPDV 185
DGL + GN + F+EM ++G P+V
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V ++V+I G++ KA+ L + MI G +PN+FTY S+I+GFC+ G + A +
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
M S+G P+ + YN L++ K+ EA ++ M+ G +
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMW 374
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 147/329 (44%), Gaps = 47/329 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ G+ TF LI C + A K+ F++ + P +Y ++ L
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKL---FMRMQKLGCTPNVVTYGTLIKGLCA 208
Query: 58 IRQYKL-IEWVYQQMSDEG-----YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+ + ++W + ++D P++++Y+I++ ++G ++ L +EM G
Sbjct: 209 LGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGV 268
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
P+ T+++L+ +L K + + A LL M ++G P++ +T+L+ G G+L++ K
Sbjct: 269 QPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKE 328
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F M +KG PDV+ Y ++I Y ++E+A LF+ M+ G P+V T +++
Sbjct: 329 LFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF 388
Query: 232 MAGKFD-----------------------------------EACTMMKEMESRGCNPNFL 256
+AGK D EA + E+ES +
Sbjct: 389 LAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE 448
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ L+ L AGKL A E+ + E+G
Sbjct: 449 TFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 98/213 (46%), Gaps = 6/213 (2%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
I ++N ++ ++ Q L +M +G PD T NIL++ L ++ L +
Sbjct: 90 SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ G+ P V+ FTTL+ GL + F M GC P+VV Y +I A
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCAL 209
Query: 199 GELEKAQDLFDGMITKGQ------LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
G + A M+ PNV +Y+ +I G C G ++EA + EM +G
Sbjct: 210 GNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQ 269
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + ++ L+ L G++ +A +++ M++ G
Sbjct: 270 PNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIG 302
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 88/201 (43%), Gaps = 11/201 (5%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
Q H+ D M RS FS +N LL L K + +L M G P +L L+
Sbjct: 79 QAHQFFDLMMRSIFS-----FNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILI 133
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ L ++ + +G +PDVV +T +I + +A LF M G
Sbjct: 134 NCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCT 193
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESR------GCNPNFLVYNTLVSNLRNAGKL 271
PNV TY ++I+G C G + A +EM + C PN + Y+ ++ L G
Sbjct: 194 PNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNW 253
Query: 272 AEAHEVIRHMVEKGKYIHLVS 292
EA + MV++G ++V+
Sbjct: 254 EEAICLFNEMVDQGVQPNVVT 274
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 41/282 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T+ LI C G++ A+ E F+ + P SYN +++
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAK---ELFVSMPSKGYEPDVISYNMLINGYCK 354
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL--------------- 102
+ + ++ +M G PD+ T +++ A + GK+D L
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCI 414
Query: 103 ----LDEMGRSGF----------------SPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
LD + ++G+ D T+ L+ L K K A L +
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLY 474
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G P + +++++ G + G +D F +M GC PD++ Y++++ + + +LE
Sbjct: 475 EEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLE 534
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
K L MI K P+ Y + C K+ E +++
Sbjct: 535 KVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 114/215 (53%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PDI++YN ++ + +L++ LL EM S P+ TY IL+ L K + A+ L
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L MK G + V+ ++TL+ G G LD K FDEM KG P+VV Y+ +I +
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +A + M +G P+V+TY MI G C G+ +A + M +G P+ +
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN L++ L G + +A ++ M+EKGK + +VS
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS 222
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
K N P SYN I++ L ++ + + +M P+ TY I+M + G++
Sbjct: 2 KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLH-VLGKG--DKPLAALNLLNHMKEVGFDPSVLHF 153
++ RLL EM R G D Y+ L+ KG D+ A L + M E G P+V+ +
Sbjct: 62 EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKA---LFDEMLEKGISPNVVVY 118
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ L++G + G M +G PDV YT MI G KA DLFD M
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG+ P+ TYN +I G C G +A + + M +G + YNTL+ L N GKL E
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238
Query: 274 AHEVIRHMVEKGKYIH 289
A ++ ++E G Y+
Sbjct: 239 AMKLFSSLLEDGNYVE 254
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 95/181 (52%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M R PD +YN +++ L K + A++LL M+ +P+ + LMDGL + G
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
++ EM KG DVV Y+ +I+ + + G L++ + LFD M+ KG PNV Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I GFC G + EA ++ M RG P+ Y ++ L G+ +A ++ M EKG
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 286 K 286
+
Sbjct: 181 E 181
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G ++N LI C G++ A K+ ++ + P ++N ++ L
Sbjct: 211 MLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNY-VEPDVITFNTVIQGLCK 269
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y M + G ++ T +I++ + G +D+ L + + G P T
Sbjct: 270 EGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTT 329
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++++ K A L + MK G P++ + TLM L + +L+ + F EM
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C PD + + +MI + AG++ A++L + M G P+ +TY+S I G+ +
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
EA M + G P+ VY++L+ ++ E ++R M + G + L
Sbjct: 450 EAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDL 502
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 128/274 (46%), Gaps = 14/274 (5%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-------KLI 64
TFN +I + G K VE I + F N + H L+G +Y K +
Sbjct: 259 TFNTVIQGLCKEGRLDKAVE--IYDTMIERGSFGNLFTC--HILIG--EYIKSGIIDKAM 312
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E +++++ G P TY++++ ++ L+ L M SG SP YN L+
Sbjct: 313 E-LWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMAS 371
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K A L MKE +P + F ++DG +AG++ + K ++M G PD
Sbjct: 372 LCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPD 431
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y+ I G++E+A+ FD MI G P+ Y+S+I+GF + + +E +++
Sbjct: 432 AYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLR 491
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+M G + + N++++ L N+ + E++
Sbjct: 492 QMADMGVILDLEITNSILTFLCNSAEHLHVMELL 525
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T +ILI + G+ K +E + + P +Y+ ++ +
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G +P + YN +M + + L+Q RL EM S PD ++NI
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNI 402
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K +A LLN M+++G P +++ ++ LS+ G ++ K FD M G
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASG 462
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
PD Y +I + E+E+ +L M G + ++ NS++ C
Sbjct: 463 ITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%)
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
LP++ +YN++I G C + ++A ++ EME C PN Y L+ L G++ EA
Sbjct: 7 LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66
Query: 277 VIRHMVEKGKYIHLV 291
++ M KG + +V
Sbjct: 67 LLGEMKRKGLEVDVV 81
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 149/293 (50%), Gaps = 8/293 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T++ LI VG + ++ F K L N +P ++N ++ +
Sbjct: 204 MVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGK 263
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + V+ M +G P+++TY +M + ++++ + + + M + G +PD +YNI
Sbjct: 264 MKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNI 323
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K K A+NL M P+V+ +T+L+DGL ++G + DEM ++G
Sbjct: 324 MINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383
Query: 181 CMPDVVCYTVMITSYIAAGELEKA--------QDLFDGMITKGQLPNVFTYNSMIRGFCM 232
PD++ Y+ ++ + +++KA +F+ + KG +V+ Y MI+GFC+
Sbjct: 384 VPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCV 443
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G F+EA ++ +ME G P+ Y ++ +L + A +++R M+ +G
Sbjct: 444 KGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 496
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 17/286 (5%)
Query: 12 TFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
++ LI +VG AR ++ R + KL +P YN I+ ++ ++ +Y
Sbjct: 145 SYGTLINGLCKVGQARAALQLLRRVDGKLV--QPNVVMYNTIIDSMCKVKLVNEAFDLYS 202
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M EG +PD++TY+ ++ + +GKL L ++M PD +T+NIL+ K
Sbjct: 203 EMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDG 262
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K + M + G P+V+ + +LMDG ++ F+ MA G PD Y
Sbjct: 263 KMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYN 322
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+MI + ++++A +LF M K +PNV TY S+I G C +GK A ++ EM R
Sbjct: 323 IMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDR 382
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
G P+ + Y++++ L + H+V K I L++K K
Sbjct: 383 GVPPDIITYSSILD------ALCKNHQV-------DKAIALLTKLK 415
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 137/294 (46%), Gaps = 13/294 (4%)
Query: 5 GFPTTARTFNILICTCGEVG---LARKVVERFIK----------SKLFNFRPFKNSYNAI 51
G + T NILI ++G L+ V +K + L K SY +
Sbjct: 90 GIASNLVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTL 149
Query: 52 LHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
++ L + Q + + +++ + P+++ YN ++ + ++ +++ L EM G
Sbjct: 150 INGLCKVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGI 209
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
SPD TY+ L+ K A++L N M P V F L+DG + G + K
Sbjct: 210 SPDVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKT 269
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F M +G P+VV Y ++ Y ++ KA +F+ M G P+ +YN MI GFC
Sbjct: 270 VFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFC 329
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K DEA + K+M + PN + Y +L+ L +GK++ A +++ M ++G
Sbjct: 330 KIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRG 383
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 126/251 (50%), Gaps = 13/251 (5%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+ IL +L+ I Y +++QM +G A +++T NI++ +LG+ + +
Sbjct: 63 FGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSVFANIL 122
Query: 108 RSGFSPDFHT-------------YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+ G+ P+ T Y L++ L K + AAL LL + P+V+ +
Sbjct: 123 KKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMYN 182
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
T++D + + ++ + EM ++G PDVV Y+ +I+ + G+L+ A DLF+ MI +
Sbjct: 183 TIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILE 242
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
P+V+T+N ++ GFC GK E T+ M +G PN + Y +L+ ++ +A
Sbjct: 243 NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKA 302
Query: 275 HEVIRHMVEKG 285
+ + M + G
Sbjct: 303 NSIFNTMAQGG 313
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 79/182 (43%), Gaps = 21/182 (11%)
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+++ N L H K P + F ++ L + +M KG ++V ++
Sbjct: 44 VSSFNRLLHQKNP--TPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNIL 101
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM-------------AGKFDE 238
I + G+ + +F ++ KG PNV T ++I+G C+ G+
Sbjct: 102 INCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARA 161
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A +++ ++ + PN ++YNT++ ++ + EA ++ MV +G Y L+S
Sbjct: 162 ALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALIS 221
Query: 293 KF 294
F
Sbjct: 222 GF 223
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 135/284 (47%), Gaps = 7/284 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I GE+ A ++V+ SK + +YN ++ LL + +
Sbjct: 268 TYNVVINGLARKGELEKAAQLVDIMRLSK----KASAFTYNPLITGLLARDFVEKAGALL 323
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +EG P ++TYN ++ ++ G + DEM G PD TYN L++ K
Sbjct: 324 LEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKA 383
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL L +K G P+VL + L+DG R G+L+ + +EM + C+PDV Y
Sbjct: 384 GNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTY 443
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ L + FD M++KG P+ F YN+ I G A + +EM
Sbjct: 444 TILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMML 503
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG + + + YN L+ L G L +A+ + MV G + V+
Sbjct: 504 RGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 3/244 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
PF N +L L ++ + VY M G P I TYN ++ + + G++DQ L
Sbjct: 192 PFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVAL 251
Query: 103 LDEMG--RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +M +G P+ TYN++++ L + + A L++ M+ + S + L+ GL
Sbjct: 252 LKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMR-LSKKASAFTYNPLITGL 310
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
++ EM N+G +P VV Y +I G E AQ FD M KG LP++
Sbjct: 311 LARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDL 370
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYNS+I G+C AG +A + +++ G P L YN L+ G L A +
Sbjct: 371 ITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEE 430
Query: 281 MVEK 284
M E+
Sbjct: 431 MTEE 434
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 133/320 (41%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T T+N LI + G A +F + + P +YN++++
Sbjct: 326 MENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGN 385
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K ++ + G P +LTYNI++ RLG L+ RL +EM PD TY I
Sbjct: 386 LKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTI 445
Query: 121 LLH-----------------VLGKGDKP------------------LAALNLLNHMKEVG 145
L++ +L KG +P A L M G
Sbjct: 446 LMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG 505
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ + L+DGL + G+L + +M G D V YT +I ++ G L +A+
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++FDGM+ G P+V TY I +C G A ++M G PN + YN L+ L
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+ A++ M+E+G
Sbjct: 626 CRMGRTESAYQHFHEMLERG 645
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 120/284 (42%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+NILI C G++ AR++ E + P +Y +++ +R
Sbjct: 400 GLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCL---PDVCTYTILMNGSCMVRNL 456
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ + +M +G PD YN + A+ +G + +L +EM G S D TYN+L
Sbjct: 457 AMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVL 516
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A L M G + +T L+ G L K FD M G
Sbjct: 517 IDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGL 576
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV YT+ I +Y G L A F M+ +G PN TYN ++ C G+ + A
Sbjct: 577 SPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQ 636
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM RG PN Y L+ G A + M +KG
Sbjct: 637 HFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKG 680
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
C F EMA G P V ++ A + + ++ M+ G P++FTYN+++
Sbjct: 178 CLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLD 237
Query: 229 GFCMAGKFDEACTMMKEMESR--GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
FC AG+ D+A ++K+ME+R GC PN + YN +++ L G+L +A +++ M
Sbjct: 238 SFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM 292
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G TA TF +LI C A +V E K +YN+++ L
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM---KQQGIAASVVTYNSLISGLCS 311
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M D G +P+ +T+ V+ + G + + +D M PD
Sbjct: 312 EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVI 371
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ V + K A+ + M + G P+V + L+ G SR+G+ + DEM
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG DVV Y V+I + GE+ KA L D M G PN TYN++I+GFC G
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A + ME N + YN + GK+ EA++++ M++K
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +S NA+L L+G ++ L E ++ +PDI T+N V+ R+G+L +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGK--GDKPLAALN-LLNHMKEVGFDPSVLHFTTLMD 158
+ ++ G +P TYN L+ K G + ++ LL M E G P+ + F L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G + N A F+EM +G VV Y +I+ + G++E+ L + M G P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N T+ +++GFC G +A + M R P+ ++YN L+ R GK+ +A V
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 279 RHMVEKG------KYIHLVSKFKR 296
M +KG Y L++ F R
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSR 416
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 18/290 (6%)
Query: 5 GFPTTARTFNILI---CTCGEVG-------LARKVVERFIKSKLFNFRPFKNSYNAILHA 54
G + T+N LI C G G L +++VE I F N Y +
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+R V+++M +G A ++TYN ++ GK+++ +L++EM G SP+
Sbjct: 281 AAAVR-------VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+ +L K A + ++ M E +P V+ + L+D R G ++ +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
MA KG P+V Y +IT + +G+ A L D M KG +V TYN +I C G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ +A ++ EM G PN L YNT++ + G + A+E IR +EK
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE-IRTRMEK 502
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL---GIRQYKLIEWVY 68
TFN +I +G RK + K + P +YN+++ G ++ +
Sbjct: 193 TFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL 252
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M + G +P +T+ +++ + R+ +EM + G + TYN L+ L
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K + L+ M+++G P+ + F ++ G + G + + D M + PDVV Y
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I Y G++E A + + M KG PNV TYN +I GF +G + A ++ EM+
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + + YN L+ L G++ +A +++ M E G
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 119 NILLHVLGKGDKPLAALN--LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
++L+ L + +PL A + LL PS L+ GL A +D + F
Sbjct: 123 DMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSA 182
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM---A 233
+ PD+ + +I+ G+L KA D+ + G P+V TYNS+I G+C A
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G ++KEM G +P + + L++ A A V M ++G +V+
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 134/278 (48%), Gaps = 9/278 (3%)
Query: 12 TFNILICTCGEVGLARK----VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T N++I GLARK ++ + + +YN ++ LL K + +
Sbjct: 276 THNVVI-----TGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDL 330
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M +EG P ++TYN ++ + G+++ EM G PD TYN LL+ K
Sbjct: 331 QLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCK 390
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL L ++ G P+VL + L+DG R G+L+ + +EM +GC+PDV
Sbjct: 391 AGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCT 450
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT+++ A L A++ FD M++KG P+ F YN+ IR G +A + + M
Sbjct: 451 YTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMM 510
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + + YN L+ L G L +A ++ MV G
Sbjct: 511 LEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNG 548
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 138/320 (43%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T T+N +I + G +F++ + +P +YN++L+
Sbjct: 334 MENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGS 393
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K ++ + G AP +LTYNI++ RLG L++ RL +EM G PD TY I
Sbjct: 394 LKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453
Query: 121 LL-----------------HVLGKGDKP--------------LAALNLLNHMKEV----G 145
L+ +L KG +P L A+ ++EV G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ + L+DGL + GNL+ K +M + G PD + YT +I ++ G L +A+
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
F MI+ G P+ TY I +C G A ++M G PN + YN L+ L
Sbjct: 574 KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+ A+ M+E+G
Sbjct: 634 CRTGRTQLAYRHFHEMLERG 653
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 118/240 (49%), Gaps = 5/240 (2%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L L ++ I V+ +M G P I+TYN ++ + + G+ D+ LL EM
Sbjct: 206 NRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMET 265
Query: 109 --SGFSPDFHTYNILLHVLG-KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
SG P+ T+N+++ L KGD AA ++ M+ + S + L+ GL G
Sbjct: 266 RGSGCLPNDVTHNVVITGLARKGDLEEAA-EMVEGMR-LSKKASSFTYNPLITGLLAKGF 323
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ EM N+G MP VV Y MI + +G++E AQ F M G P+V TYNS
Sbjct: 324 VKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNS 383
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ G+C AG EA + ++ G P L YN L+ G L EA + MVE+G
Sbjct: 384 LLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 443
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 118/284 (41%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+NILI C G++ AR++ E ++ P +Y ++
Sbjct: 408 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCL---PDVCTYTILMKGSHNACSL 464
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M +G PD YN + A+ LG + + RL + M G S D TYNIL
Sbjct: 465 AMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNIL 524
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A +L M G P + +T L+ G L + FF +M + G
Sbjct: 525 IDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGL 584
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P V YTV I +Y G L A F M+ +G PN TYN +I C G+ A
Sbjct: 585 APSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYR 644
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM RG PN Y L+ G +A M + G
Sbjct: 645 HFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNG 688
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 13/288 (4%)
Query: 1 MIENGFPTTARTFNILI------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA 54
M+E G T+ IL+ C+ + +AR+ + + L +P +YN + A
Sbjct: 439 MVEQGCLPDVCTYTILMKGSHNACS---LAMAREFFDEMLSKGL---QPDCFAYNTRIRA 492
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L + + + M EG + D +TYNI++ + G L+ L +M +G PD
Sbjct: 493 ELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPD 552
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TY L+H + A M G PS + +T + R GNL + +F
Sbjct: 553 CITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFR 612
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M +G P+ + Y V+I + G + A F M+ +G +PN +TY +I G C G
Sbjct: 613 KMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEG 672
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+++A EM G +P++L + L + G + A E + + V
Sbjct: 673 NWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHAIEYLENAV 719
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 95/215 (44%), Gaps = 40/215 (18%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L FH EM G +PD N +L VL + + M ++G +PS++ + T
Sbjct: 187 LSAFH----EMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNT 242
Query: 156 LMDGLSRAGNLDACKYFFDEMANKG--CMPDVVCYTVMITSYIAAGELEKAQDLFDGM-- 211
L+D + G D EM +G C+P+ V + V+IT G+LE+A ++ +GM
Sbjct: 243 LLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRL 302
Query: 212 ------------IT--------------------KGQLPNVFTYNSMIRGFCMAGKFDEA 239
IT +G +P V TYN+MI G +G+ + A
Sbjct: 303 SKKASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAA 362
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
EM + G P+ + YN+L++ AG L EA
Sbjct: 363 QVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEA 397
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
C F EMA+ G PDV ++ A + + M+ G P++ TYN+++
Sbjct: 186 CLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLD 245
Query: 229 GFCMAGKFDEACTMMKEMESR--GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
F G+ D+ ++KEME+R GC PN + +N +++ L G L EA E++ M
Sbjct: 246 SFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM 300
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 14/115 (12%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+ E ++ PD C T+ +++ F M + G P+V N ++R
Sbjct: 168 YSKECTDRDATPDT-CSTLCLSA-------------FHEMASHGVAPDVKDCNRVLRVLS 213
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A ++D+ C + EM G P+ + YNTL+ + G+ + +++ M +G
Sbjct: 214 DAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGS 268
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E GFP + +NILI C G + A+ + K L RP S+N +++ L
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGL---RPTTVSFNTLINGLCK 270
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + + M + PD+ TY++++ + G+LD +L DEM + G P+ T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ + + +A+N + M +G P ++ + TL++GL + G+++ + DEM
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD + YT +I Y G+LE A ++ GM +G + + + ++I GFC G+
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++EM G P+ Y ++ G + ++++ M G
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 135/294 (45%), Gaps = 8/294 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ L+ + G ++ F + NF+ PF + +L ++ I Y ++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPF-HGCGYLLDKMINSNSPVTIWTFYSEI 214
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G+ P + YNI++ + G + + +E+ + G P ++N L++ L K
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L M+E P V ++ L+ GL + G LD + FDEM +G P+ + +T +
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTAL 334
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + ++ A + + M+T G P++ YN+++ G C G ++A ++ EM G
Sbjct: 335 IDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGM 394
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
P+ + Y TL+ G L A E+ + M E+G + L+S F R R
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 15/305 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M EN T+++LI C G + +A ++ + + L RP ++ A++
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL---RPNGITFTALIDGQCR 340
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ Y QM G PD++ YN ++ ++G +++ +L+DEM G PD T
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K +A+ + M E G + FT L+ G R G + + EM
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD YT++I Y G ++ L M G P V TYN ++ G C G+
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
A +++ M + G P+ + YN L+ GK A ++++ EKG Y LV
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577
Query: 292 SKFKR 296
S++ +
Sbjct: 578 SEYNK 582
>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 755
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 110/201 (54%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E V++ M EG PD++TYN +M + +L++ L+DEM +G SPD TYNIL+H
Sbjct: 530 ESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 589
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ A +++ + GF PS L FT ++ GLS+ G+ + MA+ PD
Sbjct: 590 MVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPD 649
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV + ++ Y A +EKA LFD ++ G P+V YN++I G+C G ++AC ++
Sbjct: 650 VVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIG 709
Query: 245 EMESRGCNPNFLVYNTLVSNL 265
M RG PN ++ LV L
Sbjct: 710 LMVQRGMLPNESTHHALVVGL 730
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 113/230 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++++G P + T+ +LI C + G F K P +YN +++ Q
Sbjct: 501 LLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQ 560
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M G +PD+ TYNI++ + G +D+ + ++ E+ R GF P +
Sbjct: 561 LNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTD 620
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K A L +M ++ P V+ + L+ G RA ++ FD++ + G
Sbjct: 621 VIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAG 680
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
PDVV Y +I Y + G++EKA +L M+ +G LPN T+++++ G
Sbjct: 681 LKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVGL 730
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 121/282 (42%), Gaps = 35/282 (12%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F RP Y++ L + ++Q++ + G PD Y ++ LG+ D+
Sbjct: 434 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDK 493
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ + +SG P TY +L+ K A ++ MK G P V+ + LM
Sbjct: 494 AFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMY 553
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G + L+ DEM + G PDV Y ++I S + G +++A ++ +I +G +P
Sbjct: 554 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVP 613
Query: 219 -----------------------------------NVFTYNSMIRGFCMAGKFDEACTMM 243
+V T ++++ G+C A + ++A +
Sbjct: 614 SALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLF 673
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ G P+ ++YNTL+ + G + +A E+I MV++G
Sbjct: 674 DKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 715
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 111/247 (44%), Gaps = 32/247 (12%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M D G PDI+ + + + + G L + +L ++ G S D + + ++ K K
Sbjct: 364 MKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGK 423
Query: 131 PLAALNLLNHMK--------------------------------EVGFDPSVLHFTTLMD 158
P A+ L++ + E+G P +TT++D
Sbjct: 424 PEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMID 483
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G G D FF + G P ++ YT++I + G + A+ +F M T+G P
Sbjct: 484 GYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHP 543
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V TYN+++ G+ + ++ ++ EM S G +P+ YN L+ ++ G + EA+E+I
Sbjct: 544 DVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEII 603
Query: 279 RHMVEKG 285
++ +G
Sbjct: 604 SELIRRG 610
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 88/199 (44%), Gaps = 3/199 (1%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G D+ LL M G PD + + + L K A ++L +K G +
Sbjct: 352 GYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSV 411
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
++++DG + G + + P++ Y+ +++ + G++ +A +F +
Sbjct: 412 SSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFE 468
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G LP+ + Y +MI G+C G+ D+A + G P+ + Y L+ G +++
Sbjct: 469 LGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISD 528
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A V R M +G + +V+
Sbjct: 529 AESVFRIMKTEGLHPDVVT 547
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 32/184 (17%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL L + + G PS +L++ + RA L+ + F + M ++G + ++ I
Sbjct: 287 ALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHMLSRGRHLNAALLSLFIR 346
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN- 252
Y + G +K +L GM G P++ + I C AG EA +++ +++ G +
Sbjct: 347 KYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQ 406
Query: 253 -------------------------------PNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
PN VY++ +SN+ + G + A + + +
Sbjct: 407 DSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEI 466
Query: 282 VEKG 285
E G
Sbjct: 467 FELG 470
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 2/144 (1%)
Query: 137 LLNHMKEVGFDPSVLH--FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
++ + E D VL F L+D + +D ++ G P ++
Sbjct: 253 VIKDLFETRIDRRVLETVFCMLIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEE 312
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ A LE A++ + M+++G+ N + IR +C G FD+ ++ M+ G P+
Sbjct: 313 ILRAHGLELAREFVEHMLSRGRHLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPD 372
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVI 278
+ + + L AG L EA V+
Sbjct: 373 IVAFTVFIDKLCKAGFLREATSVL 396
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 141/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G P T N +I C + A V+++ I + P +YN+++H L
Sbjct: 147 MLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM---PNCTTYNSLIHGYLS 203
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q+ + ++MS +G P+++TYN+++ + G + + + M +SG PD T
Sbjct: 204 SGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATT 263
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LLH + N+ + M + G + F+ + + G LD F +M
Sbjct: 264 YGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQ 323
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G MPD+V YT +I G L+ A F MI G PN+ T+ ++I GF M GK++
Sbjct: 324 QLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWE 383
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A + EM RG P+ ++ ++ L GK+ EA ++ M G ++VS
Sbjct: 384 KAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVS 438
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 143/302 (47%), Gaps = 9/302 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+N+LI C G AR++ I+S +P +Y ++LH
Sbjct: 217 MSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQS---GPKPDATTYGSLLHGYAT 273
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V M G + T++I + A + G+LD+ +M + GF PD T
Sbjct: 274 EGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVT 333
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K + A++ M + G P+++ FTTL+ G S G + + F EM
Sbjct: 334 YTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMM 393
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G PDV +T MI G++ +AQ LFD M G PNV +YN+MI G+ +AG+
Sbjct: 394 DRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVG 453
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAG---KLAEAHEVIRHMVEKGKYIHLVSKF 294
E ++ +M G P + +NTL+ + + G + +I E G+ +++ F
Sbjct: 454 EVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLF 513
Query: 295 KR 296
+
Sbjct: 514 RE 515
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+VG K F K P + N+++ L ++ E V QQM DE P+
Sbjct: 135 GDVG---KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNC 191
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
TYN ++ G+ + R+L EM R G P+ TYN+L+ L K A + N
Sbjct: 192 TTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNS 251
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M + G P + +L+ G + GNL D M G + +++ I +Y G
Sbjct: 252 MIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGR 311
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A F M G +P++ TY ++I G C G+ D+A + +M G +PN + + T
Sbjct: 312 LDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTT 371
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ GK +A E+ M+++G
Sbjct: 372 LIHGFSMYGKWEKAEELFYEMMDRG 396
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 3/219 (1%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
APDI T+ I++ G L+ L ++ ++G D + LL L + A+N
Sbjct: 10 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMN 69
Query: 137 L-LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG--CMPDVVCYTVMIT 193
+ L M E+G P V ++TL+ GL + MA G C PDVV Y+ +I
Sbjct: 70 IVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIH 129
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ KA LF M+ G PNV T NS+I G C D+A ++++M P
Sbjct: 130 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 189
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N YN+L+ ++G+ EA +++ M G+ ++V+
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 228
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 104/202 (51%), Gaps = 4/202 (1%)
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
+CAK R D + +L M G +PD +Y+ LL L K A L++ M E G
Sbjct: 57 TLCAKKRTS--DAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDG 114
Query: 146 FD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
+ P V+ ++T++ G + G++ F +M + G P+VV +I ++K
Sbjct: 115 DNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDK 174
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+ + MI + +PN TYNS+I G+ +G++ EA ++KEM G PN + YN L+
Sbjct: 175 AEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLID 234
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L +G AEA E+ M++ G
Sbjct: 235 CLCKSGFHAEAREIFNSMIQSG 256
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 11/281 (3%)
Query: 12 TFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-RQYKLIEWV 67
TF ILI C + G L + + IK+ L R ++ +L L R + V
Sbjct: 15 TFGILISCCCDAGCLNLGFAALGQIIKTGL---RADAVAFTPLLRTLCAKKRTSDAMNIV 71
Query: 68 YQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++M + G PD+ +Y+ ++ CA+ + + + ++ E G + PD +Y+ ++H
Sbjct: 72 LRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDN-CPPDVVSYSTVIHG 130
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K A L M + G P+V+ +++DGL + +D + +M ++ MP+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y +I Y+++G+ +A + M GQ PNV TYN +I C +G EA +
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M G P+ Y +L+ G L E + V MV+ G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNG 291
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 121/281 (43%), Gaps = 25/281 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G A T+ L+ T G + V + +++ + R ++++ ++A
Sbjct: 252 MIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGM---RSNHHTFSIEIYAYCK 308
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G+ PDI+TY V+ ++G+LD +M G SP+ T
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+H K A L M + G P V FT ++D L + G + + FD M
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKA-------------------QDLFDGMITKGQLP 218
G P+VV Y MI Y AGE+ + L DGM++ G P
Sbjct: 429 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKP 488
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+V T ++I C G+ ++ T+ +EM + + + N
Sbjct: 489 DVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 135/332 (40%), Gaps = 42/332 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G A F L+ C A +V R + P SY+ +L L
Sbjct: 39 IIKTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPE--LGCTPDVFSYSTLLKGLCA 96
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ + + M+++G PD+++Y+ V+ ++ G + + + L +M G P+
Sbjct: 97 EKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNV 156
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T N ++ L K A +L M + P+ + +L+ G +G E
Sbjct: 157 VTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKE 216
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG------ 229
M+ G P+VV Y ++I +G +A+++F+ MI G P+ TY S++ G
Sbjct: 217 MSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGN 276
Query: 230 -----------------------------FCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+C G+ DEA +M+ G P+ + Y T
Sbjct: 277 LVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTT 336
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ L G+L +A M++ G ++++
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368
>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
Length = 636
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 132/281 (46%), Gaps = 4/281 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF F++L+ E+G+ + F++ F P S NA LH L + L
Sbjct: 61 GFGVFDALFSVLV----ELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ M G AP + TYNI++ + G + L ++M + G +PD TYN L+
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK ++ L MK +G +P V+ + L++ + + FF EM +K P+
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ Y+ +I + G ++ A F M G LPN FTY+S+I C AG EA +
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + N + Y TL+ L G + EA E+ R M + G
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAG 337
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 139/288 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N LI G++GL + V F + K P +YNA++++ +
Sbjct: 162 GLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRA 221
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+++M D+ P++++Y+ ++ A + G + + +M R G P+ TY+ L+
Sbjct: 222 FEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDA 281
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K A L + M + D +++ +TTL+DGL G ++ + F M G P+
Sbjct: 282 NCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPN 341
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ YT +I +I ++KA +LF+ M K P++ + +++ G C K +E +M
Sbjct: 342 LQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMT 401
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM+ G N ++Y TL+ AG EA ++ M + G + +V+
Sbjct: 402 EMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVT 449
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 124/274 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ L+ E G+ + E F P +Y A++H + +R ++ +M
Sbjct: 309 TYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEM 368
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++ PDIL + ++ KL++ ++ EM SG + Y L+ K
Sbjct: 369 REKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNR 428
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+NLL M+++G + +V+ F L+DGL + G + Y+F M + P+V YT +
Sbjct: 429 TEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTAL 488
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + A+ LFD M K +P+ Y +MI G G F EA M +M G
Sbjct: 489 IDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGI 548
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y +LV L G++ +A + + M+ KG
Sbjct: 549 ELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKG 582
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 107/218 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++QM G PDI+TYN ++ ++G LD+ L +EM G PD TYN L++
Sbjct: 154 LFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFC 213
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K L A MK+ P+V+ ++TL+D L + G + FF +M G +P+
Sbjct: 214 KFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEF 273
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + AG L +A L D M+ + N+ TY +++ G C G +EA + + M
Sbjct: 274 TYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAM 333
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G PN Y L+ + +A E+ M EK
Sbjct: 334 GKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREK 371
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 4/222 (1%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I W + + G+ ++ + LG L+ + M + P + N LH
Sbjct: 50 ILWTTRNVCVPGFG----VFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLH 105
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K + + + M G P+V + ++ + + G++ + F++M G P
Sbjct: 106 RLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTP 165
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D+V Y +I Y G L+++ LF+ M G P+V TYN++I FC A
Sbjct: 166 DIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFF 225
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM+ + PN + Y+TL+ L G + A + M G
Sbjct: 226 REMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVG 267
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 71/185 (38%), Gaps = 17/185 (9%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
R GF +Y IL+H+L A N+L KE+ VL + + + L N+
Sbjct: 2 RVGFRHTTESYCILVHILFYARMYFHANNIL---KELVLSSWVLPGSDVFEILWTTRNV- 57
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
C+P + + + + G LE A F M LP + N+ +
Sbjct: 58 -------------CVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFL 104
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
AG+ D + ++M G P YN ++ ++ G + A + M + G
Sbjct: 105 HRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLT 164
Query: 288 IHLVS 292
+V+
Sbjct: 165 PDIVT 169
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 139/321 (43%), Gaps = 37/321 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ N ++N LI +G K F + + P +YN +L L +
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGE 424
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + +M +EG APDI+TY I++ ++G L DEM G D + Y
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484
Query: 121 -LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC---------- 169
++ L GD A +L M GF P ++ + ++DGL + GNL+
Sbjct: 485 RIVGELKLGDTS-RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD 543
Query: 170 -------------------------KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
+ F EM +KG P VV YTV+I + G LE+A
Sbjct: 544 GVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERA 603
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
F M KG LPNV TYNS+I G C + D+A EM +G PN Y L++
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINE 663
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
N G EA + + M+++G
Sbjct: 664 NCNMGNWQEALSLYKQMLDRG 684
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N+LI GE A+ ++ +K+ L + +YN +++ +
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGL---KVSAYTYNPLIYGYFNKGMLAEALSLQ 327
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M +G +P + TYN + +LG++ + L +M + PD +YN L++ +
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L + ++ + P+++ + TL+DGL R G L+ + EM N+G PD+V Y
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L AQ+ FD M+ +G + + Y + I G G A ++ +EM +
Sbjct: 448 TILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ ++YN +V L G L EA E+++ MV G
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +A T+N LI G+ + + + L P +YN+ ++ L + +
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 61 YKLIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ QQ+SD PD+++YN ++ RLG L + L DE+ P T
Sbjct: 355 ---MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL L + + A L M G P ++ +T L++G + G+L + FFDEM
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G D Y I + G+ +A L + M+ KG P++ YN ++ G C G +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++++M S G P+++ Y +++ G+L + E+ M+ KG
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 132/282 (46%), Gaps = 10/282 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+ IL+ C G + +A++ + + L + + + LG
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL-ELDSYAYATRIVGELKLG 493
Query: 58 --IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R + L E +M +G+ PD++ YN+V+ +LG L++ LL +M G PD+
Sbjct: 494 DTSRAFSLQE----EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDY 549
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY ++H + + + M G PSV+ +T L+ G + G L+ +F E
Sbjct: 550 VTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M KG +P+V+ Y +I +++A + F M+ KG PN ++Y +I C G
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ EA ++ K+M RG P+ ++ L+ L KL ++
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 3/257 (1%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
V ++ IKS+L P + N IL L VY+ M + G P I+TYN ++
Sbjct: 186 VFDKMIKSRL---SPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLD 242
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+ + GK+ Q LL EM R G +P+ TYN+L++ L K + A L+ M + G
Sbjct: 243 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 302
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
S + L+ G G L +EM KG P V Y I G + A
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ LP+V +YN++I G+C G +A + E+ S P + YNTL+ L
Sbjct: 363 SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 269 GKLAEAHEVIRHMVEKG 285
G+L A ++ M+ +G
Sbjct: 423 GELEVAQQLKVEMINEG 439
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
++Q + D+M +S SPD N +L +L D A+ + M E G P+++ + T
Sbjct: 180 VEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNT 239
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+D + G + EM +GC P+ V Y V+I GE E+A+ L M+ G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ +TYN +I G+ G EA ++ +EM +G +P YN+ + L G++++A
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359
Query: 276 EVIRHMVEKGKYIHLVS 292
+ + M+ +VS
Sbjct: 360 QQLSDMLANNLLPDVVS 376
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 2/188 (1%)
Query: 100 HRLLDEMGRSGFSPDFHT--YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
HR++D + S + ++L+ V K L++ + M + P V + ++
Sbjct: 147 HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRIL 206
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
L + + M G P +V Y ++ SY G++++ DL M +G
Sbjct: 207 RILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCA 266
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
PN TYN +I G G+F++A ++ EM G + YN L+ N G LAEA +
Sbjct: 267 PNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSL 326
Query: 278 IRHMVEKG 285
MV KG
Sbjct: 327 QEEMVLKG 334
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T T+NI+I C C G+V AR + E K P +YN+++
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM---KFRGLVPDTVTYNSMIDGFGK 309
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++M D PD++TYN ++ + GKL EM +G P+ +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A+ M+ VG P+ +T+L+D + GNL +EM
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +VV YT +I A +++A++LF M T G +PN+ +YN++I GF A D
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ E++ RG P+ L+Y T + L + K+ A V+ M E G
Sbjct: 490 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 4/288 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF F++LI ++G+ + ++ F K K F P S N +LH + + +
Sbjct: 191 GFGVFDALFSVLI----DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ M G P + TYNI++ + G ++ L +EM G PD TYN ++
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK + + MK++ +P V+ + L++ + G L F+ EM G P+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ ++ ++ G +++A + M G +PN +TY S+I C G +A +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM G N + Y L+ L +A ++ EA E+ M G +L S
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 474
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 136/288 (47%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N +I G+VG V F + K P +YNA+++ + +
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIG 351
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
Y++M G P++++Y+ ++ A + G + Q + +M R G P+ +TY L+
Sbjct: 352 LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K A L N M +VG + +V+ +T L+DGL A + + F +M G +P+
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ Y +I ++ A +++A +L + + +G P++ Y + I G C K + A +M
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM+ G N L+Y TL+ +G E ++ M E + +V+
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+ LI + ++ E F K P SYNA++H + +
Sbjct: 428 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 487
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ G PD+L Y + L K++ +++EM G + Y
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK- 179
L+ K P L+LL+ MKE+ + +V+ F L+DGL + + +F+ ++N
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G + +T MI ++E A LF+ M+ KG +P+ Y S++ G G EA
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M G + L Y +LV L + +L +A + M+ +G
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 713
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 1/247 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y A++ L + K E ++ +M G P++ +YN ++ + +D+ LL+E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD Y + L +K AA ++N MKE G + L +TTLMD ++GN
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK-GQLPNVFTYNS 225
+ DEM VV + V+I + KA D F+ + G N + +
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
MI G C + + A T+ ++M +G P+ Y +L+ G + EA + M E G
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 286 KYIHLVS 292
+ L++
Sbjct: 679 MKLDLLA 685
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 90/237 (37%), Gaps = 50/237 (21%)
Query: 106 MGRSGFSPDFHTYNILLH------------------VLGKGDKPL--------------- 132
M R+GF +Y I+ H VL K D +
Sbjct: 133 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 192
Query: 133 -----------------AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
A+ + MK P L+ ++ G D K FF +
Sbjct: 193 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 252
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G P V Y +MI G++E A+ LF+ M +G +P+ TYNSMI GF G+
Sbjct: 253 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 312
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D+ +EM+ C P+ + YN L++ GKL E R M G ++VS
Sbjct: 313 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 133/272 (48%), Gaps = 13/272 (4%)
Query: 27 RKVVERFIKSKLFN--FRPFKNS-----------YNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E +K K F + +K +N ++ + +L + V+ ++
Sbjct: 105 RKVLEHLMKLKYFKLVWSFYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITK 164
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P ++++N +M +LG LD+ RL M SG PD +TY++L++ L K K
Sbjct: 165 WGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDE 224
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M + G P+ + FTTL+DG + G LD + +M ++G PD + Y +I
Sbjct: 225 AHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIY 284
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L +A+DL D M KG P+ TY ++I G C G + A K M
Sbjct: 285 GLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRL 344
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + Y L+S L G+ +A +++R M+ G
Sbjct: 345 DDVSYTALISGLCKEGRSVDAEKMLREMLSVG 376
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E +P + FNIL+ C GE+ LA+ V + K + RP S+N +++ +
Sbjct: 127 ILECRYPASLYFFNILMDRFCKEGEIRLAQSVFDGITK---WGLRPSVVSFNTLMNGYIK 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D+ H+L DEM G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K K A+ + M GF P + + TL+ GL + G+L K DEM+
Sbjct: 244 FTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A + MI + + +Y ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++EM S G P+ Y ++ G + ++++ M G
Sbjct: 364 DAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDG 411
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G++ LA ++ ++ + F P +YN +++ L
Sbjct: 232 MLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQ---GFSPDXITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +MS +G PD +TY ++ + G L+ M + D +
Sbjct: 289 KGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVS 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K + + A +L M VG P +T +M + G++ EM
Sbjct: 349 YTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P V+
Sbjct: 409 RDGHVPCVI 417
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 30/315 (9%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSK-------------------- 37
M + G T+N+LI C VG AR++++ +
Sbjct: 153 MRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDR 212
Query: 38 -------LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
L P SYNA++HAL G + + + V +M G PD + Y ++ A
Sbjct: 213 LDEARGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAF 272
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ +L +L M G P+ T+ +L+ K AL + N M G+ PS
Sbjct: 273 CKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPST 332
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + L+ GL G+L + F M C+PDV Y+ +I + AG+L+ A +++
Sbjct: 333 ISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWND 392
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G PNV Y +M+ C FD+A ++ +M C PN L +NTL+ +L + G+
Sbjct: 393 MTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGR 452
Query: 271 LAEAHEVIRHMVEKG 285
A V M G
Sbjct: 453 AGRALNVFHGMRRYG 467
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 125/252 (49%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
RP +Y +I+ A R+ ++ + +M EG P++ T+ +++ + GK+
Sbjct: 258 LRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDAL 317
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+ + M G++P +YN+L+ L AL + + M + P V ++TL+DG
Sbjct: 318 GMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGF 377
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
S+AG+LD +++M N GC P+VV YT M+ ++A++L D M + PN
Sbjct: 378 SKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNT 437
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T+N++IR C G+ A + M GC PN YN L+ L G +A ++
Sbjct: 438 LTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTE 497
Query: 281 MVEKGKYIHLVS 292
M+ G + LVS
Sbjct: 498 MLNHGFELSLVS 509
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 132/301 (43%), Gaps = 32/301 (10%)
Query: 17 ICTCGEVGLARKVVERFIKSK--LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDE 74
IC G A + ++ F +++ L P YN +L ALL + VY M
Sbjct: 97 ICAFARAGAADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKA 156
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK---- 130
G P++ TYN+++ A + ++ R+LDEM R G PD ++ ++ L K D+
Sbjct: 157 GVEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEA 216
Query: 131 --------PL-AALNLLNH-------MKEV----------GFDPSVLHFTTLMDGLSRAG 164
P+ A+ N + H M+EV G P + +T+++ +A
Sbjct: 217 RGILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKAR 276
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
L M +GC+P+V +TV++ + G++ A +++ M+ +G P+ +YN
Sbjct: 277 ELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYN 336
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+IRG C G A + M C P+ Y+TL+ AG L A + M
Sbjct: 337 VLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNA 396
Query: 285 G 285
G
Sbjct: 397 G 397
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M EG+AP ++YN+++ +G L + + MG+S PD TY+ L+
Sbjct: 319 MWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFS 378
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+++ N M G P+V+ +T ++D L + D + D+M+ + C P+ +
Sbjct: 379 KAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTL 438
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I S G +A ++F GM G PN TYN ++ G G ++A M+ EM
Sbjct: 439 TFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEM 498
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G + + YNT +S L + EA ++ M+ +G
Sbjct: 499 LNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQG 537
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G+ + ++N+LI C G++ A V KS P +Y+ ++
Sbjct: 323 MVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCL---PDVRTYSTLIDGFSK 379
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYN---IVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ ++ M++ G P+++ Y V+C K DQ L+D+M P+
Sbjct: 380 AGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKV---MFDQAENLIDKMSLENCPPN 436
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+N L+ L + ALN+ + M+ G P+ + L+ GL R GN +
Sbjct: 437 TLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLT 496
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM N G +V Y I+ +++A L MI +G P+ FT+N++I +C G
Sbjct: 497 EMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEG 556
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M+ M++ C N + Y +L+S L + KL +A + M+ +G
Sbjct: 557 NVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEG 607
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 36/276 (13%)
Query: 44 FKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----F 99
++ A + L +++ Q+M G A +CA R G D+ F
Sbjct: 54 LARAHEATVRRLAAAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTF 113
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+R ++G + +P YN LL L + + A + + ++M++ G +P+V + L+
Sbjct: 114 YRARHDLGCA--APTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKA 171
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF----------- 208
L + + A + DEMA KGC PD V +T +I++ L++A+ +
Sbjct: 172 LCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYN 231
Query: 209 -------------------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
D M+ +G P+ Y S++ FC A + AC ++ M +
Sbjct: 232 AVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTE 291
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC PN + LV + GK+ +A + MV +G
Sbjct: 292 GCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEG 327
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%), Gaps = 2/243 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P Y ++ L + E + +MS E P+ LT+N ++ + LG+ +
Sbjct: 399 KPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALN 458
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ M R G P+ TYN LLH L + AL +L M GF+ S++ + T + GL
Sbjct: 459 VFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLC 518
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ + M +G PD + +I +Y G + A + M N+
Sbjct: 519 QMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIV 578
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRH 280
Y S++ G C K D+A + +M G PN +N LV + + G + H +I H
Sbjct: 579 AYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMH-LIDH 637
Query: 281 MVE 283
++E
Sbjct: 638 IIE 640
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 64/143 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +GF + ++N I ++ + ++ + + + +P ++NAI+HA
Sbjct: 498 MLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGN 557
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ W+ +M +I+ Y +M KLD L +M G P+ T+N+
Sbjct: 558 VRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNV 617
Query: 121 LLHVLGKGDKPLAALNLLNHMKE 143
L+ + + ++L++H+ E
Sbjct: 618 LVRGIFTHLGTIGPMHLIDHIIE 640
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 127/257 (49%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
V+ F + ++ P + N +++ + Q +M G+ PD++T+ ++
Sbjct: 101 VISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLH 160
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+++ L D++ GF P+ TY L+H L K A+ + N M + G P
Sbjct: 161 GFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRP 220
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V+ + +L+ GL G + +M +G P+V+ +T +I +++ G++ +A++L+
Sbjct: 221 NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELY 280
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
MI P+VFTY ++I G C G+ DEA M MES G PN + Y TL+ +
Sbjct: 281 KVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKS 340
Query: 269 GKLAEAHEVIRHMVEKG 285
++ + ++ M +KG
Sbjct: 341 KRVEDGTKIFYEMSQKG 357
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 123/249 (49%), Gaps = 1/249 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F R F N Y IL L Q+ ++ +M P I+ + ++ ++ + D
Sbjct: 42 FWIRAFSN-YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDV 100
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L ++M G SP +T NI+++ + + +P A L M ++GF+P ++ FT+L+
Sbjct: 101 VISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLH 160
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G ++ FD++ G P+VV YT +I L A ++F+ M G P
Sbjct: 161 GFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRP 220
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV TYNS++ G C G++ +A ++++M RG PN + + L+ GK+ EA E+
Sbjct: 221 NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELY 280
Query: 279 RHMVEKGKY 287
+ M++ Y
Sbjct: 281 KVMIQMSVY 289
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF TF L+ C + A + ++ + FRP +Y ++H L
Sbjct: 143 MMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVG---MGFRPNVVTYTTLIHCLCK 199
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ QM D G P+++TYN ++ +G+ LL +M + G P+ T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K K + A L M ++ P V +T L++GL G LD + F M
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P+ V YT +I + + +E +F M KG + N TY +I+G+C+ G+ D
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A + +M SR P+ YN L+ L G + +A + ++M ++ I++V+
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVT 434
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 133/292 (45%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVG-------LARKVVERFIKSKLFNFRPFKNSYNAILH 53
M +NG T+N L+ E+G L R +++R I+ + F A++
Sbjct: 213 MGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF-------TALID 265
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A + + + + +Y+ M PD+ TY ++ G+LD+ ++ M +G+ P
Sbjct: 266 AFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYP 325
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY L+H K + + M + G + + +T L+ G G D + F
Sbjct: 326 NEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVF 385
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++M ++ PD+ Y V++ G +EKA +F M + N+ TY +I+G C
Sbjct: 386 NQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKV 445
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK ++A + + S+G PN + Y T++S G + EA + + M E G
Sbjct: 446 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDG 497
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 35/316 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N++I ++G + V+ F + L N P +Y+ +++ L R+
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ +M EG P+ +T+N+++ A + G L + +L+D M G P+ TYN L+H
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288
Query: 125 L---GKGDKPLAAL--------------------------------NLLNHMKEVGFDPS 149
L GK DK L+ L ++L M+E G +
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 348
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+++L+ GL + G + + EMA KGC P+VV Y I + ++A+D+
Sbjct: 349 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 408
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M++KG LPN FTY+S+++GF G +A + KEM S+ N + + L++ L +G
Sbjct: 409 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 468
Query: 270 KLAEAHEVIRHMVEKG 285
+L EA V HM+ +G
Sbjct: 469 RLREALTVWTHMLGEG 484
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 100/177 (56%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
GF P+ TYN+++ L K + A++ M +P V ++TLM+GL + +D
Sbjct: 169 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 228
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ DEM +GC+P+ V + V+I + G+L +A L D M KG +PN TYN++I G
Sbjct: 229 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 288
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
C+ GK D+A +++++M S C PN + Y T+++ L + + ++ M E+G+
Sbjct: 289 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 345
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A ++E+ + SK P + +Y I++ L+ R+ + +
Sbjct: 281 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCV---PNQVTYGTIINGLVKQRRAEDGVHIL 337
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M + G + Y+ ++ ++ GK + RL EM G P+ Y + L +
Sbjct: 338 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 397
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+KP A ++L M GF P+ +++LM G + G+ + EM ++ +VVC
Sbjct: 398 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 457
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+V++ +G L +A ++ M+ +G P+V Y+SMI+G C G D+ + EM+
Sbjct: 458 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 517
Query: 249 R--GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ P+ + YN L + L L A +++ M+++G
Sbjct: 518 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 556
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y A + L + E + Q+M +G+ P+ TY+ +M ++ G + + EM
Sbjct: 387 YGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM 446
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ ++LL+ L + + AL + HM G P V+ +++++ GL G++D
Sbjct: 447 SQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVD 506
Query: 168 ACKYFFDEM--ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F EM PDVV Y ++ + L +A DL + M+ +G P+ T N
Sbjct: 507 KGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 565
>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
Length = 704
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 123/246 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S + +L + +R+ V M G+A ++ +NI++ R + + LL EM
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM 168
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R+ PD +YN ++ +G + AL L N MK G S++ + L+D +AG +
Sbjct: 169 RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKM 228
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM G D+V YT +I + GEL++ + LFD ++ +G P TYN++
Sbjct: 229 DEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTL 288
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
IRGFC G+ EA + + M RG PN Y L+ L GK EA + + M+EK +
Sbjct: 289 IRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDE 348
Query: 287 YIHLVS 292
+ V+
Sbjct: 349 EPNAVT 354
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 113/218 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M PD+ +YN V+ +L++ L +EM SG S T+ IL+
Sbjct: 164 LLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFC 223
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A+ L MK +G + ++ +T+L+ G G LD K FDE+ +G P +
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + G+L++A ++F+ MI +G PNV+TY +I G C GK EA + M
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLM 343
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ PN + YN +++ L G +A+A E++ M ++
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 4/276 (1%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NIL+ C G++ A K++ +K + P SYNA++H L + +Y
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYT-DPDVISYNALIHGLCKENRLHQALDIY 447
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ ++ A D +T NI++ + + G +++ L ++ S + TY ++ K
Sbjct: 448 DLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A LL M+ PSV + L+ L + G+LD F+EM PDVV +
Sbjct: 508 GMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSF 567
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+MI + AG+++ A+ L GM G P++FTY+ +I F G DEA + +M
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + ++++ + G+ + E+++ +V+K
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDK 663
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 8/297 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G A T+N LI C G++ A ++ E I+ + RP +Y ++ L G
Sbjct: 273 VLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGV---RPNVYTYTGLIDGLCG 329
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + K M ++ P+ +TYNI++ + G + +++ M + PD T
Sbjct: 330 VGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNIT 389
Query: 118 YNILLHVL-GKGDKPLAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
YNILL L KGD A+ L +K+ + DP V+ + L+ GL + L +D
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ K D V +++ S + AG++ KA +L+ + + N TY +MI GFC G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ A ++ +M P+ YN L+S+L G L +A + M + +VS
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 132/293 (45%), Gaps = 12/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF NIL+ C E G A ++ ++ L P SYN ++
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM---PDVFSYNTVIRGFCE 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + +M G + ++T+ I++ A + GK+D+ L EM G D
Sbjct: 190 GKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVV 249
Query: 118 YNILLHVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
Y L+ G+ D+ A L + + E G P + + TL+ G + G L F+
Sbjct: 250 YTSLIRGFCDCGELDRGKA---LFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFE 306
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M +G P+V YT +I G+ ++A + MI K + PN TYN +I C G
Sbjct: 307 FMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+A +++ M+ R P+ + YN L+ L G L EA +++ M++ Y
Sbjct: 367 LVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSY 419
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 135/294 (45%), Gaps = 16/294 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE A T+NI+I C G V A ++VE K + RP +YN +L L
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRT---RPDNITYNILLGGLCA 399
Query: 58 IRQY-KLIEWVYQQMSDEGYA-PDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGF 111
+ + +Y + D Y PD+++YN + +C + RL + LD + L++++G
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG---- 455
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+ D T NILL+ K A+ L + + + +T ++DG + G L+ K
Sbjct: 456 AGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKG 515
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+M P V Y +++S G L++A LF+ M P+V ++N MI G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
AG A +++ M G +P+ Y+ L++ G L EA MV+ G
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%)
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ LM L R+ N + F+ +M + V + ++ Y+ + A + M+
Sbjct: 76 SNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G NV+ +N +++G C + +A ++++EM P+ YNT++ +L +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A E+ M G LV+
Sbjct: 196 ALELANEMKGSGCSWSLVT 214
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 154/316 (48%), Gaps = 35/316 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N++I ++G + V+ F + L N P +Y+ +++ L R+
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ +M EG P+ +T+N+++ A + G L + +L+D M G P+ TYN L+H
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312
Query: 125 L---GKGDKPLAAL--------------------------------NLLNHMKEVGFDPS 149
L GK DK L+ L ++L M+E G +
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKAN 372
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+++L+ GL + G + + EMA KGC P+VV Y I + ++A+D+
Sbjct: 373 EYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQ 432
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M++KG LPN FTY+S+++GF G +A + KEM S+ N + + L++ L +G
Sbjct: 433 EMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESG 492
Query: 270 KLAEAHEVIRHMVEKG 285
+L EA V HM+ +G
Sbjct: 493 RLREALTVWTHMLGEG 508
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 149/324 (45%), Gaps = 39/324 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGIR 59
M G T F ++ CG+ L + V F + + + + S+N++L+ ++
Sbjct: 115 MKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEG 174
Query: 60 QYKLIEWVYQQM---SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ Y + + +G+ P++LTYN+++ A +LG++D+ EM +PD
Sbjct: 175 DFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVF 234
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY+ L++ L K + A+ LL+ M+ G P+ + F L+D LS+ G+L D M
Sbjct: 235 TYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM 294
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT----------------------- 213
KGC+P+ V Y +I G+L+KA L + M++
Sbjct: 295 FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA 354
Query: 214 ------------KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+GQ N + Y+S+I G GK + A + KEM +GC PN +VY
Sbjct: 355 EDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAF 414
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ L K EA ++++ M+ KG
Sbjct: 415 IDGLCRDEKPDEAEDILQEMLSKG 438
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 100/177 (56%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
GF P+ TYN+++ L K + A++ M +P V ++TLM+GL + +D
Sbjct: 193 GFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEA 252
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ DEM +GC+P+ V + V+I + G+L +A L D M KG +PN TYN++I G
Sbjct: 253 VFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHG 312
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
C+ GK D+A +++++M S C PN + Y T+++ L + + ++ M E+G+
Sbjct: 313 LCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQ 369
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A ++E+ + SK P + +Y I++ L+ R+ + +
Sbjct: 305 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCV---PNQVTYGTIINGLVKQRRAEDGVHIL 361
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M + G + Y+ ++ ++ GK + RL EM G P+ Y + L +
Sbjct: 362 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 421
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+KP A ++L M GF P+ +++LM G + G+ + EM ++ +VVC
Sbjct: 422 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 481
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+V++ +G L +A ++ M+ +G P+V Y+SMI+G C G D+ + EM+
Sbjct: 482 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 541
Query: 249 R--GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ P+ + YN L + L L A +++ M+++G
Sbjct: 542 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEG 580
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 2/179 (1%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y A + L + E + Q+M +G+ P+ TY+ +M ++ G + + EM
Sbjct: 411 YGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMM 470
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ ++LL+ L + + AL + HM G P V+ +++++ GL G++D
Sbjct: 471 SQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVD 530
Query: 168 ACKYFFDEM--ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F EM PDVV Y ++ + L +A DL + M+ +G P+ T N
Sbjct: 531 KGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 589
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 135/282 (47%), Gaps = 9/282 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G TA T++ L C G + AR+VV+ P +YN ++HAL Q
Sbjct: 115 GSAATAVTYSALADGYCRVGRLDEARRVVDGM------PVLPSAYAYNPLMHALCVRGQV 168
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + M G APD++TYNI++ A + Q L+D M G +P TYN++
Sbjct: 169 RDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVI 228
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + + A LLN + G P+ +++ T++ GL AG + + EM ++ C
Sbjct: 229 MDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENC 288
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P +V+I+S G ++A L + M N+ TYN+++ G C G D A
Sbjct: 289 PPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALY 348
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ M++ GC PN YN LV L NA + +A +++ M +
Sbjct: 349 LLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQ 390
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 141/287 (49%), Gaps = 8/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E PT T+N+++ C G+V AR+++ + P +YN +L L
Sbjct: 215 VEGCTPTNV-TYNVIMDGMCREGDVDYARELLNSLPS---YGCTPNTVNYNTVLKGLRTA 270
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+++ +E + +M E P T ++V+ + + G + RLL++M + + + TY
Sbjct: 271 GRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTY 330
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N ++ L + AL LL++M+ G P++ + L+ GL A + + +M+
Sbjct: 331 NAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQ 390
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
C+PD++ + +I G +A ++F M KG PN TY+S+I G GK ++
Sbjct: 391 TDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQ 450
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ EM S+G NP + Y+ L L KL EA +++ + + G
Sbjct: 451 SLELLNEMGSKGFNPE-INYHLLAECLNEEDKLVEAIQMVHKLQDTG 496
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+ G T+NIL+ C G R+ +E ++ P +YN I+ +
Sbjct: 178 MLYRGCAPDVVTYNILLEAACKGRGY-RQAMELIDLMRVEGCTPTNVTYNVIMDGMCREG 236
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + G P+ + YN V+ G+ + L+ EM P T +
Sbjct: 237 DVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLS 296
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ L + A+ LL M + +++ + ++ GL G++D Y M
Sbjct: 297 VVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTD 356
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ Y +++ A E A+DL M LP++ T+N++I C G +A
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K+M +GC PN + Y++++ L GK+ ++ E++ M KG
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG 462
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 133/284 (46%), Gaps = 1/284 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M P + T +++I + + GL ++ + K + +YNA++ L
Sbjct: 283 MFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGH 342
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M +G P+I TYNI++ + + L+ +M ++ PD T+N
Sbjct: 343 VDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNT 402
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + + A+ + M E G P+ + ++++++GL++ G ++ +EM +KG
Sbjct: 403 IIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG 462
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++ Y ++ +L +A + + G P YN+++ G C GK D+A
Sbjct: 463 FNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ M S GC P+ Y+ L+ L + G + EA E++ + +
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR 565
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 44/223 (19%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+LD R+++ S PD N L+ L + +P A ++ + G + + +
Sbjct: 70 GELDAALRVVES---SLCPPDVALANRLVRDLCRRGRPADAARVV---EACGSAATAVTY 123
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ L DG R G LD + D M +P Y ++ + G++ A L D M+
Sbjct: 124 SALADGYCRVGRLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLY 180
Query: 214 KGQLPNVFTYNSMIR-----------------------------------GFCMAGKFDE 238
+G P+V TYN ++ G C G D
Sbjct: 181 RGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDY 240
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A ++ + S GC PN + YNT++ LR AG+ + E+I M
Sbjct: 241 ARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEM 283
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 15/286 (5%)
Query: 7 PTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
P T TFN LI V L ++V R + LF +Y +++ L
Sbjct: 167 PNTV-TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-------TYGTVVNGLCKRG 218
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
L + ++M D++ Y ++ A ++ L EM G P+ TYN
Sbjct: 219 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 278
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L + A LL+ M E +P+V+ F+ L+D + G L + +DEM +
Sbjct: 279 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 338
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD+ Y+ +I + L++A+ +F+ MI+K PNV TYN++I+GFC A + +E
Sbjct: 339 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 398
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM RG N + YNTL+ L AG A ++ + MV G
Sbjct: 399 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 43/313 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++NILI C ++ LA V+ + +K + P + +++L+ ++ +
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMK---LGYEPDIVTLSSLLNGYCHGKRISEAVALV 157
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK- 127
QM Y P+ +T+N ++ + K + L+D M G PD TY +++ L K
Sbjct: 158 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 217
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
GD LA L+LL M++ + V+ +TT++D L N++ F EM NKG P+VV
Sbjct: 218 GDIDLA-LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276
Query: 188 Y-----------------------------------TVMITSYIAAGELEKAQDLFDGMI 212
Y + +I +++ G+L +A+ L+D MI
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ P++FTY+S+I GFCM + DEA M + M S+ C PN + YNTL+ A ++
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 396
Query: 273 EAHEVIRHMVEKG 285
E E+ R M ++G
Sbjct: 397 EGMELFREMSQRG 409
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G A +++ I+ K+ P +++A++ A
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI---NPNVVTFSALIDAF-- 319
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++ KL+E +Y +M PDI TY+ ++ +LD+ + + M P+
Sbjct: 320 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 379
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + + L M + G + + + TL+ GL +AG+ D + F +
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PD++ Y++++ G+LEKA +F+ + P+++TYN MI G C AGK
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + + +G PN ++Y T++S G EA + R M E G
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 3/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ LA ++++ K K+ Y I+ AL + ++ +M ++G
Sbjct: 214 LCKRGDIDLALSLLKKMEKGKI---EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+++TYN ++ G+ RLL +M +P+ T++ L+ K K + A
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M + DP + +++L++G LD K+ F+ M +K C P+VV Y +I +
Sbjct: 331 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 390
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A +E+ +LF M +G + N TYN++I+G AG D A + K+M S G P+ +
Sbjct: 391 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 450
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y+ L+ L GKL +A V ++
Sbjct: 451 TYSILLDGLCKYGKLEKALVVFEYL 475
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + IK + P +Y+++++
Sbjct: 300 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 356
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + P+++TYN ++ + ++++ L EM + G + T
Sbjct: 357 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 416
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + A + M G P ++ ++ L+DGL + G L+ F+ +
Sbjct: 417 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 476
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ Y +MI AG++E DLF + KG PNV Y +MI GFC G +
Sbjct: 477 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 536
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + +EM+ G PN YNTL+ + LR+ K A A E+I+ M
Sbjct: 537 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA-ELIKEM 580
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 7/278 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T++ LI C + A+ + E I F P +YN ++
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCK 391
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G + +TYN ++ ++ G D ++ +M G PD T
Sbjct: 392 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 451
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K K AL + ++++ +P + + +++G+ +AG ++ F ++
Sbjct: 452 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 511
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ YT MI+ + G E+A LF M G LPN TYN++IR G
Sbjct: 512 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 571
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ ++KEM S G + ++V N+ + G+L +++
Sbjct: 572 ASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSY 608
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M P I+ +N ++ A ++ K D L + M S D ++YNIL++
Sbjct: 51 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 110
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + AL +L M ++G++P ++ ++L++G + D+M P+ V
Sbjct: 111 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I + +A L D M+ +G P++FTY +++ G C G D A +++K+M
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
E + ++Y T++ L N + +A + M KG ++V+ + RC
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT-YNSLIRC 283
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
KLD L EM +S P +N LL + K +K ++L M+ + + +
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L++ R L +M G PD+V + ++ Y + +A L D M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PN T+N++I G + K EA ++ M +RGC P+ Y T+V+ L G + A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 275 HEVIRHMVEKGK 286
+++ M EKGK
Sbjct: 224 LSLLKKM-EKGK 234
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M+ +G P T++IL+ C G++ A V E KSK+ P +YN ++
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM---EPDIYTYNIMIEGMCK 496
Query: 54 --------------ALLGIRQYKLI-----------------EWVYQQMSDEGYAPDILT 82
+L G++ +I + ++++M ++G P+ T
Sbjct: 497 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 556
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
YN ++ A+ R G L+ EM GF D T ++++++L G + L +L+
Sbjct: 557 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 613
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 27 RKVVERFIKSKLFNF-RPFKNS------------YNAILHALLGIRQYKLIEWVYQQMSD 73
+K++E +K K FN F +N ++H +L + V+ ++
Sbjct: 105 KKMLEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITK 164
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P +++YN +M RLG L++ +L M SG PD +TY++L++ L K K
Sbjct: 165 WGLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDD 224
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L M G P+ + FTTL+DG + G +D + +M ++ +PD++ Y +I
Sbjct: 225 ANELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIY 284
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G L +A DL D M KG P+ TY ++I G C G D A K M
Sbjct: 285 GLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 344
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLVSKF 294
+ + Y L+S L G+ +A +++R M+ + G Y ++++F
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEF 391
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 133/272 (48%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E G R VE + ++ F ++ +L L+ ++ + L+ Y+++
Sbjct: 69 FSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKMLEHLVKLKYFNLVWAFYEEIL 128
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ GY + +NI+M + G + + D + + G P +YN L++ +
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLN 188
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
L + M G P V ++ L++GL + +D F+EM KG +P+ V +T +I
Sbjct: 189 EGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLI 248
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G ++ A +++ M+++ LP++ TYN++I G C G ++A +M EM +G
Sbjct: 249 DGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLK 308
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL+ G L A E + M+++
Sbjct: 309 PDKITYTTLIDGCCKEGDLDTAFEHRKRMIQE 340
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ LA+ V + K + RP SYN +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L +EM G P+ T
Sbjct: 184 LGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G L+ DEM+
Sbjct: 244 FTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 304 MKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A MM+EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 364 DAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVT 418
>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 643
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 127/290 (43%), Gaps = 30/290 (10%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A+ V+ R + L P + S G + VY M +G P++ TYN+
Sbjct: 105 AQDVLPRRARPWLRAPPPSRGSTTTSSTRCCGENMVGAVVLVYDNMRKDGVHPNVFTYNL 164
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK------------PLA 133
++ A + ++ ++LDEM R G PD TY ++ VL K D+ P+A
Sbjct: 165 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVA 224
Query: 134 A------------------LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
A ++++ M G P+V+ +TT++D +AG L
Sbjct: 225 ASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILAR 284
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M GC P+VV +T ++ G + A D++ M+ +G P+ +YN +IRG C G
Sbjct: 285 MVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGD 344
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++ ME GC PN Y+TL+ AG L A + M G
Sbjct: 345 LKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSG 394
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 138/291 (47%), Gaps = 6/291 (2%)
Query: 5 GFPTTARTFN-ILICTCGEVGLAR--KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
P A ++N I++ C E + VV + L +P +Y I+ A +
Sbjct: 219 AMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGL---QPNVITYTTIVDAFCKAGEL 275
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ + +M G P+++T+ ++ + G++ + M G++P +YNIL
Sbjct: 276 RMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNIL 335
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L A ++LN M++ G P+V ++TL+DG S+AG+L +++M+ GC
Sbjct: 336 IRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGC 395
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+VV YT M+ + +A+ L D M+ + PN T+N++IR C + A
Sbjct: 396 KPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALG 455
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM GC PN YN L+ L G +A ++ M G + LV+
Sbjct: 456 VFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVT 506
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 132/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ ++ C GE+ +A ++ R + + P ++ A++ L
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMV---ITGCTPNVVTFTALVRGLFD 306
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++ M EG+AP ++YNI++ +G L +L+ M + G P+ T
Sbjct: 307 DGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRT 366
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A+++ N M G P+V+ +T ++D + + K D+M
Sbjct: 367 YSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKML 426
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C P+ V + +I S + +A +F M G +PN TYN +I G G
Sbjct: 427 LENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCG 486
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M+ EM+S G + + YNT+VS L EA + M+ +G
Sbjct: 487 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQG 534
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 131/298 (43%), Gaps = 12/298 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G+ + ++NILI C+ G++ A ++ + F P +Y+ ++
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCF---PNVRTYSTLIDGFSK 376
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYN---IVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
++ MS G P+++ Y V C K +Q L+D+M P+
Sbjct: 377 AGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKL---MFNQAKSLIDKMLLENCPPN 433
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+N L+ L + AL + + M+ G P+ + L+ GL R GN +
Sbjct: 434 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 493
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM + G +V Y +++ +A MI +G PN FT++++I +C G
Sbjct: 494 EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 553
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ A M+ M C+ N LVY L++ L N KL +A + M+ +G Y + V+
Sbjct: 554 EVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 611
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 18/290 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
M ++G RT++ LI G++G A + +S N + N + L+
Sbjct: 355 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 414
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGFS 112
+ LI+ +M E P+ +T+N + +C R+G+ L FH EM R G
Sbjct: 415 FNQAKSLID----KMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFH----EMRRHGCV 466
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ TYN L+H L + AL+++ M+ G + S++ + T++ GL + F
Sbjct: 467 PNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVF 526
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
+M +G P+ ++ +I +Y GE+ A + M N+ Y ++ C
Sbjct: 527 VGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCN 586
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHM 281
K +A T + +M G PN + +N LV + RN G + E + I+H+
Sbjct: 587 QDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCI-EPSDFIQHI 635
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T T+ + GEV R + E + + F P SY+ ++H L Q + +
Sbjct: 263 TLLNTYMDCVFKAGEVEKGRMIFEDI---RSYGFLPDVRSYSILIHGLTKAGQARETSNI 319
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M +G+A D YN V+ + GK+ + + +L+EM P TY ++ L K
Sbjct: 320 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 379
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D+ A L K G + +V+ +++L+DG + G +D +EM KG P+V
Sbjct: 380 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 439
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++ + + A E+ +A F M PN +TY+ +I G C K+++A ++M+
Sbjct: 440 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 499
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN + Y T++S L G + +A+ + G
Sbjct: 500 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 537
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 127/242 (52%), Gaps = 6/242 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF AR +N ++ C G+V A +++E +K K +P +Y AI+ L
Sbjct: 323 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE-MKEKCV--QPTVATYGAIVDGLAK 379
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +L+EM + G +P+ +T
Sbjct: 380 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 439
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL MKE+ P+ ++ L++GL R + F+ +M
Sbjct: 440 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 499
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VV YT MI+ G + A LF+ G +P+ ++N++I G A +
Sbjct: 500 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 559
Query: 238 EA 239
EA
Sbjct: 560 EA 561
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ + G+ PD+ +Y+I++ + G+ + + M + GF+ D YN ++
Sbjct: 284 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 343
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A +L MKE P+V + ++DGL++ LD F+E +KG +VV
Sbjct: 344 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + G +++A + + M+ KG PNV+T+NS++ A + +EA + M
Sbjct: 404 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 463
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ C PN Y+ L++ L K +A + M ++G ++V+
Sbjct: 464 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 509
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++++ G PD+ N M ++ G++++ + +++ GF PD +Y+IL+H L
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 308
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + N+ + MK+ GF + ++DG ++G + +EM K P V
Sbjct: 309 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 368
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ L++A LF+ +KG NV Y+S+I GF G+ DEA +++EM
Sbjct: 369 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 428
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+G PN +N+L+ L A ++ EA + M E
Sbjct: 429 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 465
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 144/288 (50%), Gaps = 13/288 (4%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF--NFRPFKNSYNAILHAL-LGIR 59
E G + +FN ++ TC +G RKV E ++ + P ++YN I+ L LG R
Sbjct: 81 ERGCIPSVVSFNSIL-TC--LGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGR 137
Query: 60 QYKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+E Y+ + + +A P++LT NI++ + KL++ +++ + + G +PD
Sbjct: 138 ----VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L+ LGK + A L M + G + + + +T+L+ G + F E+
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+GC PD+ + AGE+EK + +F+ + + G LP+V +Y+ +I G AG+
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + M+ +G + YN +V +GK+ +A+E++ M EK
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++ P ++ T+NI+I C G V A ++++ + LF P + N ++ L
Sbjct: 114 MKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASLF---PNLLTVNIMVDRLCK 169
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + +++ S G PD +TY ++ + G++D+ +RL ++M +G + +
Sbjct: 170 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 229
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + + + G P + T MD + +AG ++ + F+++
Sbjct: 230 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 289
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +PDV Y+++I AG+ + ++F M +G + YN+++ GFC +GK
Sbjct: 290 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 349
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+A +++EM+ + P Y +V L +L EA+ + KG +++V
Sbjct: 350 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 403
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
F + K +P SY +++ L + E ++ QM E P YN ++
Sbjct: 6 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 65
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
G+ + ++LL+ + G P ++N +L LGK K AL+L MK+ +P+
Sbjct: 66 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSST 124
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ ++D L G ++ DEM + P+++ +M+ A +LE+A +F+
Sbjct: 125 YNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESAS 184
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G P+ TY S+I G G+ DEA + ++M G N N +VY +L+ N G+
Sbjct: 185 QRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKE 244
Query: 273 EAHEVIRHMVEKG 285
+ H++ + ++ +G
Sbjct: 245 DGHKIFKELIRRG 257
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+ E+ G PD +Y ++ VL K + A L M+ P + T++ G
Sbjct: 4 KFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGY 63
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
AG + + + +GC+P VV + ++T ++++A LF+ M K PN
Sbjct: 64 GSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNS 122
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN +I C+ G+ +EA ++ EME PN L N +V L A KL EA+++
Sbjct: 123 STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFES 182
Query: 281 MVEKG 285
++G
Sbjct: 183 ASQRG 187
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 79/159 (49%), Gaps = 1/159 (0%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A + +K G P + +T+++ L +AG L + F +M + +P Y MI
Sbjct: 2 AWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIM 61
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y +AG E A L + + +G +P+V ++NS++ K DEA ++ + M+ + P
Sbjct: 62 GYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEP 120
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N YN ++ L G++ EA+ ++ M + +L++
Sbjct: 121 NSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLT 159
>gi|297796623|ref|XP_002866196.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
gi|297312031|gb|EFH42455.1| hypothetical protein ARALYDRAFT_495822 [Arabidopsis lyrata subsp.
lyrata]
Length = 821
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 130/242 (53%), Gaps = 2/242 (0%)
Query: 43 PFKN-SYNAILHALLGIRQYKLIEWVYQQMSDEGY-APDILTYNIVMCAKYRLGKLDQFH 100
PF N +A++ I + +L ++ D G P+++TY V+ A +LGK+D+
Sbjct: 19 PFDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVTYTAVVSALCQLGKVDEVR 78
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L+ + GF D Y+ +H KG + AL M E G + V+ ++ L+DGL
Sbjct: 79 DLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMVEKGINRDVVSYSILIDGL 138
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
SR GN++ +M +G P+++ YT +I G+LE A LFD +++ G +
Sbjct: 139 SREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDAFVLFDRILSFGIEVDE 198
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
F Y ++I G C G + A +M+ +ME RG P+ L YNT+++ L AG+++EA ++ +
Sbjct: 199 FLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCKAGRVSEADDISKG 258
Query: 281 MV 282
+V
Sbjct: 259 VV 260
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 128/299 (42%), Gaps = 48/299 (16%)
Query: 27 RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV 86
RK+VE+ I + SY+ ++ L + + +M EG P+++TY +
Sbjct: 117 RKMVEKGINRDVV-------SYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAI 169
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+ + GKL+ L D + G D Y L+ + K A ++L M++ G
Sbjct: 170 IRGLCKKGKLEDAFVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGI 229
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA-------- 198
PS+L + T+++GL +AG + D+++ KG + DV+ Y+ ++ SY+
Sbjct: 230 QPSILTYNTVINGLCKAGRVSEA----DDIS-KGVVGDVITYSTLLDSYVKVENIDAVLE 284
Query: 199 ---------------------------GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
G +A L+ M G P+ TY +MI G+C
Sbjct: 285 IRRRFVEAKIPMDLVMCNILLKAFLLVGAYGEADALYRAMPEMGLTPDTATYATMIEGYC 344
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
G+ ++A M E+ + + YN ++ L G L A EV+ + EKG Y+ +
Sbjct: 345 KTGQIEDALEMFNELRKSSVSAA-VCYNHIIDALCKKGMLETAMEVLIELWEKGLYLDI 402
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D++ Y I++ + G L + L + G + + TYN L++ L + + AL L
Sbjct: 505 DVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTITYNSLINGLCQQGCLVEALRLF 564
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ + +G PS + + L+D L + G + D M +KG +P+++ Y ++ Y
Sbjct: 565 DSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKL 624
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+ E A + + P+ FT +S+I+G+C G +EA + E + + +FL +
Sbjct: 625 GQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGF 684
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
L+ G++ EA ++R M+ + L+++
Sbjct: 685 LFLIKCFCTKGRMEEARGLLREMLVSESVVKLINR 719
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 12/271 (4%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ--QMSDE 74
+C G+V R +V R ++ + F F Y+ +H + L++ + Q +M ++
Sbjct: 68 LCQLGKVDEVRDLVRR-LEDEGFEFDCV--FYSNWIHGYF--KGGALVDALMQDRKMVEK 122
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G D+++Y+I++ R G +++ LL +M + G P+ TY ++ L K K A
Sbjct: 123 GINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLITYTAIIRGLCKKGKLEDA 182
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L + + G + + TL+DG+ + GNL+ +M +G P ++ Y +I
Sbjct: 183 FVLFDRILSFGIEVDEFLYVTLIDGICKKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 242
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
AG + +A D I+KG + +V TY++++ + D + + +
Sbjct: 243 LCKAGRVSEADD-----ISKGVVGDVITYSTLLDSYVKVENIDAVLEIRRRFVEAKIPMD 297
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ N L+ G EA + R M E G
Sbjct: 298 LVMCNILLKAFLLVGAYGEADALYRAMPEMG 328
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
L LD + +++ + S D Y I+++ L K + AL+L N K G + +
Sbjct: 484 LRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALDLCNFAKSKGVTLNTIT 543
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ +L++GL + G L FD + N G +P V Y ++I + G A+ L D M+
Sbjct: 544 YNSLINGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMV 603
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+KG +PN+ YNS++ G+C G+ ++A ++ P+ ++++ G +
Sbjct: 604 SKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDAFTVSSIIKGYCKKGDME 663
Query: 273 EAHEVIRHMVEK 284
EA V E+
Sbjct: 664 EALRVFAEFKEE 675
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
+G + +TYN ++ + G L + RL D + G P TY IL+ L K L
Sbjct: 535 KGVTLNTITYNSLINGLCQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNLCKEGLFLD 594
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMI 192
A LL+ M G P++L + +++DG + G DA + +M + PD + +I
Sbjct: 595 AEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGR-VKPDAFTVSSII 653
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y G++E+A +F + + + +I+ FC G+ +EA +++EM
Sbjct: 654 KGYCKKGDMEEALRVFAEFKEENISADFLGFLFLIKCFCTKGRMEEARGLLREM 707
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAK 90
F KSK +YN++++ L +Q L+E + + + + G P +TY I++
Sbjct: 531 FAKSKGVTLNTI--TYNSLINGL--CQQGCLVEALRLFDSLDNIGLVPSEVTYGILIDNL 586
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ G +LLD M G P+ YN ++ K + A+ +L+ P
Sbjct: 587 CKEGLFLDAEKLLDSMVSKGLVPNILIYNSIVDGYCKLGQTEDAMRVLSRKMMGRVKPDA 646
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
++++ G + G+++ F E + D + + +I + G +E+A+ L
Sbjct: 647 FTVSSIIKGYCKKGDMEEALRVFAEFKEENISADFLGFLFLIKCFCTKGRMEEARGLLRE 706
Query: 211 MITKGQLPNV-------FTYNSMIRGF----CMAGKFDEACTMMKEMES----RGCNP-- 253
M+ + + + IRGF C G+ +A ++ E+ S G NP
Sbjct: 707 MLVSESVVKLINRVDAELVESESIRGFLVELCEQGRVPQAIKILDEISSTIYLSGKNPGS 766
Query: 254 ----------------------NFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+F ++ +S+L +GKL +A+E + ++
Sbjct: 767 YQRLQFLNGVNEKEIKKEDYVHDFHSLHSTISSLCTSGKLEQANEFVMSVL 817
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 82/165 (49%), Gaps = 2/165 (1%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-PDVVC 187
D + L ++ + K+V + + ++ G + G + FF+ + G + P++V
Sbjct: 2 DNAIEVLEMMTN-KKVNYPFDNFVSSAVISGFCKIGKPELALGFFETAVDSGVLVPNLVT 60
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT ++++ G++++ +DL + +G + Y++ I G+ G +A ++M
Sbjct: 61 YTAVVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDRKMV 120
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G N + + Y+ L+ L G + +A ++ M+++G +L++
Sbjct: 121 EKGINRDVVSYSILIDGLSREGNIEKALGLLGKMIKEGIEPNLIT 165
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 111/274 (40%), Gaps = 18/274 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAI--LHAL 55
M + G + T+N +I C G V A + + + + + +SY + + A+
Sbjct: 224 MEQRGIQPSILTYNTVINGLCKAGRVSEADDI-SKGVVGDVITYSTLLDSYVKVENIDAV 282
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
L IR+ +V ++ + +IL ++ Y G+ D +R + EMG +PD
Sbjct: 283 LEIRR----RFVEAKIPMDLVMCNILLKAFLLVGAY--GEADALYRAMPEMG---LTPDT 333
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY ++ K + AL + N +++ +V + ++D L + G L+ E
Sbjct: 334 ATYATMIEGYCKTGQIEDALEMFNELRKSSVSAAVC-YNHIIDALCKKGMLETAMEVLIE 392
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ KG D+ ++ S A G + DL + + N I C G
Sbjct: 393 LWEKGLYLDIHTSRTLLHSIHANGGDKGILDLVYKVEQLNSDICLGMLNDAILLLCNRGS 452
Query: 236 FDEACTMMKEMESRGCNPNF--LVYNTLVSNLRN 267
F+ A + M + F + TLV NLR+
Sbjct: 453 FEAAIEVYMIMMRKDLTVTFPSTILKTLVDNLRS 486
>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 143/286 (50%), Gaps = 10/286 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIR 59
G + T+NI+I C G++ +AR + F + K F P +YN+++ H LG+
Sbjct: 51 GIKRSVFTYNIMIDYLCKEGDLEMARSL---FTQMKEAGFTPDIVTYNSLIDGHGKLGLL 107
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +++QM D PD++TYN ++ + ++ + L EM +G P+ TY+
Sbjct: 108 DECIC--IFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYS 165
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+ K A+ M+ V P+ +T+L+D +AGNL +E+
Sbjct: 166 TFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA 225
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G +VV YT ++ G +++A+++F M+ G PN TY +++ GF A + + A
Sbjct: 226 GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA 285
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+ + P+ L+Y T++ L N +L EA +I + E G
Sbjct: 286 KDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESG 331
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 125/275 (45%), Gaps = 6/275 (2%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F+K + F P S NA+LH L + + L ++ M G + TYNI++
Sbjct: 7 ECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYL 66
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ G L+ L +M +GF+PD TYN L+ GK + + MK+ DP V
Sbjct: 67 CKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDV 126
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ + L++ + + F EM G P+VV Y+ I ++ G L++A F
Sbjct: 127 ITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVD 186
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M PN FTY S+I C AG EA +++E+ G N + Y L+ L G+
Sbjct: 187 MRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGR 246
Query: 271 LAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ EA EV R M+ G Y LV F + K
Sbjct: 247 MKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 281
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 141/284 (49%), Gaps = 2/284 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-R 59
M E GF T+N LI G++GL + + F + K + P +YNA+++ R
Sbjct: 82 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 141
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
K E++++ M G P+++TY+ + A + G L + + +M R +P+ TY
Sbjct: 142 MPKAFEFLHE-MKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 200
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K AL L+ + + G +V+ +T L+DGL G + + F M N
Sbjct: 201 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 260
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ YT ++ +I A E+E A+D+ M K P++ Y +++ G C + +EA
Sbjct: 261 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 320
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ E++ G N N ++Y TL+ +G+ EA ++ M++
Sbjct: 321 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 364
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 138/286 (48%), Gaps = 15/286 (5%)
Query: 6 FPTTARTFNILICTCGEVG---LARKVVERF----IKSKLFNFRPFKNSYNAILHALLGI 58
FP R+ N L+ +VG L+RK + IK +F +YN ++ L
Sbjct: 18 FPK-PRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVF-------TYNIMIDYLCKE 69
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++ ++ QM + G+ PDI+TYN ++ +LG LD+ + ++M + PD TY
Sbjct: 70 GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 129
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L++ K ++ A L+ MK G P+V+ ++T +D + G L FF +M
Sbjct: 130 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 189
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
P+ YT +I + AG L +A L + ++ G NV TY +++ G C G+ E
Sbjct: 190 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 249
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A + + M + G PN Y LV A ++ A ++++ M EK
Sbjct: 250 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 12/285 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++ G T+ L+ E G ++ E F P + +Y A++H + ++
Sbjct: 222 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 281
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + ++M ++ PD+L Y ++ +L++ L+ E+ SG + + Y
Sbjct: 282 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 341
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + AL LL M + L+DGL + + K FDEM +KG
Sbjct: 342 LMDAYFKSGQATEALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKG 389
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MPD + YT +I + G L++A +L D MI G ++ Y ++I G +G+ +A
Sbjct: 390 MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKAR 449
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM +G P+ +VY L+ GK+ EA E+ M ++G
Sbjct: 450 NLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+L DEM G PD Y L+ K ALNL + M E+G + + +T L+ GL
Sbjct: 380 KLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGL 439
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
S +G + + DEM KG +PD V Y +I Y A G++++A +L + M +G + +
Sbjct: 440 SHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMITGL 499
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G TA TF +LI C A +V E K +YN+++ L
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM---KQQGIAASVVTYNSLISGLCS 311
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M D G +P+ +T+ V+ + G + + +D M PD
Sbjct: 312 EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVI 371
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ V + K A+ + M + G P+V + L+ G SR+G+ + DEM
Sbjct: 372 YNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG DVV Y V+I + GE+ KA L D M G PN TYN++I+GFC G
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A + ME N + YN + GK+ EA++++ M++K
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 9/264 (3%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +S NA+L L+G ++ L E ++ +PDI T+N V+ R+G+L +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGK--GDKPLAALN-LLNHMKEVGFDPSVLHFTTLMD 158
+ ++ G +P TYN L+ K G + ++ LL M E G P+ + F L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G + N A F+EM +G VV Y +I+ + G++E+ L + M G P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N T+ +++GFC G +A + M R P+ ++YN L+ R GK+ +A V
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVK 392
Query: 279 RHMVEKG------KYIHLVSKFKR 296
M +KG Y L++ F R
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSR 416
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 18/290 (6%)
Query: 5 GFPTTARTFNILI---CTCGEVG-------LARKVVERFIKSKLFNFRPFKNSYNAILHA 54
G + T+N LI C G G L +++VE I F N Y +
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+R V+++M +G A ++TYN ++ GK+++ +L++EM G SP+
Sbjct: 281 AAAVR-------VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+ +L K A + ++ M E +P V+ + L+D R G ++ +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
MA KG P+V Y +IT + +G+ A L D M KG +V TYN +I C G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ +A ++ EM G PN L YNT++ + G + A+E IR +EK
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE-IRTRMEK 502
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL---GIRQYKLIEWVY 68
TFN +I +G RK + K + P +YN+++ G ++ +
Sbjct: 193 TFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL 252
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M + G +P +T+ +++ + R+ +EM + G + TYN L+ L
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K + L+ M+++G P+ + F ++ G + G + + D M + PDVV Y
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I Y G++E A + + M KG PNV TYN +I GF +G + A ++ EM+
Sbjct: 373 NILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + + YN L+ L G++ +A +++ M E G
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 119 NILLHVLGKGDKPLAALN--LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
++L+ L + +PL A + LL PS L+ GL A +D + F
Sbjct: 123 DMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSA 182
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM---A 233
+ PD+ + +I+ G+L KA D+ + G P+V TYNS+I G+C A
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G ++KEM G +P + + L++ A A V M ++G +V+
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 144/283 (50%), Gaps = 6/283 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ LI C GE A ++ R + KL +P Y+ I+ +
Sbjct: 183 LVALGFQFNQISYGTLIDGLCKVGETRAALDLLRR-VDGKLV--QPNVVMYSTIIDGMCK 239
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M +G +P+++TY+ ++ + +GKL L ++M PD +T
Sbjct: 240 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYT 299
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ V K K AL L++ M + G P+++ +++++D L + +D ++
Sbjct: 300 FNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLK 359
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P++ YT++I +G+LE A+++F+ ++ KG V TY M GFC G FD
Sbjct: 360 DQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFD 419
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
EA ++ +ME GC P+ Y + +L G+ A ++ R
Sbjct: 420 EASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 141/264 (53%), Gaps = 13/264 (4%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L++K+ R IK L N N + LG+ + V+ ++ GY P+ +T+
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCF-----CQLGLIPFAF--SVFAKILKMGYNPNTITFT 161
Query: 85 IV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
+ +C K ++ + FH D++ GF + +Y L+ L K + AAL+LL +
Sbjct: 162 TLIKGLCLKGQIHQALNFH---DKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRV 218
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
P+V+ ++T++DG+ + +++ + EM +KG P+VV Y+ +I+ + G+L
Sbjct: 219 DGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKL 278
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+ A DLF+ MI++ P+V+T+N ++ FC +GK A ++ EM RG PN + Y+++
Sbjct: 279 KDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSI 338
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ L ++ +A ++ + ++G
Sbjct: 339 LDALCKTHRVDKAVALLTKLKDQG 362
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 128/253 (50%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +N IL +L+ + Y + ++ ++M G P+++ NI++ +LG +
Sbjct: 82 NPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFA 141
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+ ++ + G++P+ T+ L+ L + ALN + + +GF + + + TL+DG
Sbjct: 142 FSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDG 201
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G A + K P+VV Y+ +I + A DL+ M++KG PN
Sbjct: 202 LCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPN 261
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY+++I GF GK +A + +M S P+ +N LV +GK++ A +++
Sbjct: 262 VVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVD 321
Query: 280 HMVEKGKYIHLVS 292
M ++G+ ++V+
Sbjct: 322 EMHDRGQPPNIVT 334
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 100/201 (49%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+A++ + + K ++ +M E PD+ T+NI++ + GK+ +L+DEM
Sbjct: 264 TYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEM 323
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ TY+ +L L K + A+ LL +K+ G P++ +T L+DGL +G L
Sbjct: 324 HDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKL 383
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ + F+++ KG VV Y VM + G ++A L M G +P+ TY +
Sbjct: 384 EDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELI 443
Query: 227 IRGFCMAGKFDEACTMMKEME 247
G+ D A + +E E
Sbjct: 444 KLSLFKKGENDMAEKLHRECE 464
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+ TF LI C G++ A ++ + F+ + SY ++ L
Sbjct: 148 ILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA---LGFQFNQISYGTLIDGLCK 204
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +++ + P+++ Y+ ++ + ++ L EM G SP+ T
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A++L N M P V F L+D ++G + DEM
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH 324
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P++V Y+ ++ + ++KA L + +G PN+ TY +I G C +GK +
Sbjct: 325 DRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLE 384
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + +++ +G + + Y + G EA ++ M E G
Sbjct: 385 DARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSKMEENG 432
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 91/197 (46%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+D L + + R +P +N +L L K L L M+ G P++++
Sbjct: 68 VDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNI 127
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L++ + G + F ++ G P+ + +T +I G++ +A + D ++ G
Sbjct: 128 LINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALG 187
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
N +Y ++I G C G+ A +++ ++ + PN ++Y+T++ + + +A
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247
Query: 276 EVIRHMVEKGKYIHLVS 292
++ MV KG ++V+
Sbjct: 248 DLYSEMVSKGISPNVVT 264
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
++D F+ + + P + + ++ S + + L M +G PN+ N
Sbjct: 67 DVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCN 126
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+I FC G A ++ ++ G NPN + + TL+ L G++ +A
Sbjct: 127 ILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQA 176
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 127/245 (51%), Gaps = 17/245 (6%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLG-----KLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + +G+ PD+ V+C K G L + R+++ + G PD ++YN
Sbjct: 83 YFLESVVSKGFKPDV-----VLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNA 136
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K ++ +A + + M+ GF P V+ + ++ L G L+ DE+ G
Sbjct: 137 MISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDG 196
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P V+ YT++I + I G + +A +LFD ++++G P+++TYN++IRG C G D A
Sbjct: 197 CKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRAL 256
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
++ + +RGCNP+ + YN L+ + N + + +++ MV G + L+S F
Sbjct: 257 DFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSF 316
Query: 295 KRYKR 299
R R
Sbjct: 317 CREGR 321
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 137/264 (51%), Gaps = 3/264 (1%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
++ A +V +R ++S+ F P +YN ++ +L + +L V ++ +G P ++
Sbjct: 146 QIDSANQVFDR-MRSR--GFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVI 202
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
TY I++ A G++++ L DE+ G PD +TYN ++ + K AL+ + H+
Sbjct: 203 TYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL 262
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
G +P V+ + L+ + + +M GC P+VV ++++I+S+ G +
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRV 322
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+A ++ + M KG P+ ++Y+ +I FC G+ D A +++M S GC P+ + YNT+
Sbjct: 323 REAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTI 382
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
++ L G A +V + E G
Sbjct: 383 LATLCKFGCADLALDVFEKLDEVG 406
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 118/228 (51%), Gaps = 6/228 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD+ +YN ++ + ++D +++ D M GFSPD TYNI++ L K A +
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
++ + + G PSV+ +T L++ G ++ FDE+ ++G PD+ Y +I
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G ++A D + +G P+V +YN ++R F ++++ +MK+M GC PN +
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
++ L+S+ G++ EA V+ M EKG Y L+S F + R
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGR 356
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 139/276 (50%), Gaps = 4/276 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GI 58
++++G + T+ ILI G + +E F + RP +YNAI+ + G+
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ +++V + +S G PD+++YNI++ + + + RL+ +M SG P+ T+
Sbjct: 252 ED-RALDFV-RHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+IL+ + + A+N+L MKE G P + L+ + G LD + ++M +
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC+PD+V Y ++ + G + A D+F+ + G P V YN+M G +
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A M+ EM +G +P+ + YN+L+S L G + EA
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEA 465
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 144/287 (50%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
++ G T+N +I + G+ + ++ R + ++ N P SYN +L + L
Sbjct: 227 LVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCN--PDVVSYNILLRSFLNK 284
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+++ E + + M G P+++T++I++ + R G++ + +L+ M G +PD ++Y
Sbjct: 285 SRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSY 344
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L+ K + A+ L M G P ++++ T++ L + G D F+++
Sbjct: 345 DPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDE 404
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC P V Y M ++ + G KA ++ MI KG P+ TYNS+I C G DE
Sbjct: 405 VGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDE 464
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ +ME+ P + +N ++ + A ++ E E++ MVEKG
Sbjct: 465 AIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKG 511
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + M ++G PD +Y+ ++ A + G+LD L++M G PD YN +L L
Sbjct: 328 VLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLC 387
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AL++ + EVG P+V + T+ L GN EM KG PD +
Sbjct: 388 KFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEI 447
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I+ G +++A L M P V ++N ++ G C A + E ++ M
Sbjct: 448 TYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITM 507
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC PN Y L+ + AG AEA E+ + G
Sbjct: 508 VEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLG 546
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 1/134 (0%)
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
H L++ RAG + YF + + +KG PDVV T +I + + L+KA + + +
Sbjct: 64 HLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEIL 123
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
T G P+V++YN+MI GF A + D A + M SRG +P+ + YN ++ +L + GKL
Sbjct: 124 ETYGD-PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKL 182
Query: 272 AEAHEVIRHMVEKG 285
A EV+ +++ G
Sbjct: 183 ELAFEVMDELLKDG 196
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 100/239 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G T +ILI + G R+ V K P SY+ ++ A +
Sbjct: 297 MVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGR 356
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L ++M +G PDI+ YN ++ + G D + +++ G P YN
Sbjct: 357 LDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNT 416
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L + AL +++ M G DP + + +L+ L R G +D +M
Sbjct: 417 MFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATR 476
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P V+ + +++ A + + +L M+ KG LPN +Y +I G AG EA
Sbjct: 477 FQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 149/305 (48%), Gaps = 17/305 (5%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFI--KSKLFNFRPFKNSYNAILHALLGIRQ 60
E+G + ++ CG+ G + RF SK +R Y A++ L +RQ
Sbjct: 81 ESGVAVRSGLTERVLNRCGDAG---NLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQ 137
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR---LLDEMGRSGFSPDFHT 117
+ + + ++M E P ++ + + R + +LDEM + G PD H
Sbjct: 138 FGAVWALIEEMRREN--PQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHV 195
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ LL L K A +L M+ + F P++ HFT+L+ G R G L KY ++
Sbjct: 196 FGCLLDALCKNGSVKEAASLFEDMR-IRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIR 254
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD+V Y ++T Y AAG++ A DL M K PNV ++ ++I+ C K +
Sbjct: 255 EAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKME 314
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
EA + EM+S GC + + Y TL+S GK+++ +E++ +M+++G Y+H++
Sbjct: 315 EAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM 374
Query: 292 SKFKR 296
+ ++
Sbjct: 375 AAHEK 379
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN + F +L+ + +K +E + + P ++ + +L AL K
Sbjct: 151 ENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVK 210
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+++ M + P + + ++ R GKL + +L ++ +GF PD YN LL
Sbjct: 211 EAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLL 269
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + A +LL M+ +P+V+ FTTL+ L ++ F EM + GC
Sbjct: 270 TGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCP 329
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
D V YT +I+ + G++ K +L D MI +G +PN TY ++ + +E +
Sbjct: 330 ADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIEL 389
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
M+EM GC P+ +YN ++ R A KL E E +R
Sbjct: 390 MEEMRKIGCTPDLNIYNIVI---RLACKLGEIKEGVR 423
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 8/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE--WVYQQMSDE 74
+C G V A + E F P + ++L+ R+ KL+E +V Q+ +
Sbjct: 203 LCKNGSVKEAASLFEDM----RIRFTPTLKHFTSLLYGW--CREGKLMEAKYVLVQIREA 256
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ PDI+ YN ++ GK+ + LL EM R P+ ++ L+ L K A
Sbjct: 257 GFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEA 316
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ + M+ G + +TTL+ G + G + D M +G +P+ + Y ++ +
Sbjct: 317 MRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAA 376
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ ELE+ +L + M G P++ YN +IR C G+ E + EME+ G +P
Sbjct: 377 HEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPG 436
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ + L EA E + MV +G
Sbjct: 437 LDTFVIMIHGFLSQRCLVEACEFFKEMVGRG 467
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 121/245 (49%), Gaps = 16/245 (6%)
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y+L++ + QQ G+ P+ +TY +M A + +L++ L++EM + G +PD + YNI
Sbjct: 352 YELLDNMIQQ----GHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 407
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG-LSRAGNLDACKYFFDEMANK 179
++ + K + + + N M+ G P + F ++ G LS+ ++AC+ FF EM +
Sbjct: 408 VIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACE-FFKEMVGR 466
Query: 180 GCM--PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + P ++ S + A +LE ++D++ ++TKG NV+ + I G
Sbjct: 467 GLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVK 526
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLR---NAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
EAC+ +M G P + L+ LR N AE E +R M + + F
Sbjct: 527 EACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMT-----F 581
Query: 295 KRYKR 299
K YKR
Sbjct: 582 KMYKR 586
>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 493
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF + TF L+ C + A +V++ + + P YN I+ +L
Sbjct: 134 MMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVG---LGYEPNVVIYNTIIDSLCE 190
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
RQ V M G PD++TYN ++ + GK R+L +M R G PD T
Sbjct: 191 NRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVIT 250
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ ++ V GK + L A + M + DP+++ + +L++GL G LD K + M
Sbjct: 251 FSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMV 310
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+ V Y ++ Y + ++ A + M G + FTYN++ +G+C AG+F+
Sbjct: 311 SKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFN 370
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A ++ M S G P+ +N L+ L GK+ +A
Sbjct: 371 AAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKA 407
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 137/277 (49%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F+ LI C C + LA + + +K F P ++ ++++ + + + +
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMK---LGFEPSIVTFGSLVNGFCHVNRIQEAMSLV 166
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+ GY P+++ YN ++ + ++D +L+ M + G PD TYN L+ L
Sbjct: 167 DQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHS 226
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K + +L+ M +G P V+ F+ ++D + G L K +DEM + P++V Y
Sbjct: 227 GKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTY 286
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I G L++A+ + + M++KG PN TYN+++ G+C + + D+A ++ M
Sbjct: 287 NSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSH 346
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + YNTL AG+ A +V+ MV G
Sbjct: 347 DGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCG 383
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 24/321 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF---IKSKLFN-----------FRPFKN 46
++E G P TA + N+ C G ER + S FN RP +
Sbjct: 15 LLEKGNPVTALSLNV--CNFGAFSGGSDYRERLRSGLHSIKFNDALTLFCDMAESRPLPS 72
Query: 47 --SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
++ +L A+ +++Y+ + +++ + G + D+ +++ ++ R +L L
Sbjct: 73 IVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLG 132
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M + GF P T+ L++ ++ A++L++ + +G++P+V+ + T++D L
Sbjct: 133 KMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENR 192
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D + M G PDV+ Y +IT +G+ + + M+ G P+V T++
Sbjct: 193 QVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFS 252
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+MI F G+ EA EM R +PN + YN+L++ L G L EA +V+ MV K
Sbjct: 253 AMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK 312
Query: 285 G------KYIHLVSKFKRYKR 299
G Y LV+ + + KR
Sbjct: 313 GFFPNAVTYNTLVNGYCKSKR 333
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 110/247 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G TF+ +I G+ G + +++ + + P +YN++++ L
Sbjct: 239 MMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGL 298
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V M +G+ P+ +TYN ++ + ++D ++L M G D TYN
Sbjct: 299 LDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNT 358
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + + AA +L M G P + F L+DGL G ++ +++
Sbjct: 359 LYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSE 418
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ ++ Y ++I A ++E A LF + KG P+V TY +M+ G + EA
Sbjct: 419 TVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAH 478
Query: 241 TMMKEME 247
+ ++M+
Sbjct: 479 ELYRKMK 485
>gi|224120112|ref|XP_002331139.1| predicted protein [Populus trichocarpa]
gi|222872867|gb|EEF09998.1| predicted protein [Populus trichocarpa]
Length = 329
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G + ++I ++G ++ F + ++Y A++ + +
Sbjct: 27 MCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALIDGVCKAGE 86
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + +M G + L YN ++ + G +D+ ++ M + GF D +T N
Sbjct: 87 MEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFENDIYTLNT 146
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L K ++P A L M E G P+V+ +TTL+D + GN K F EM G
Sbjct: 147 IADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLFQEMKKAG 206
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y V+I + G +++A +L D M KG P+++TY S++ G C+ GK D+A
Sbjct: 207 GEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIFGKLDDAV 266
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ E+ +G N + Y ++S L G+ EA ++ M E G
Sbjct: 267 ELFNEVRQKGLPLNVVTYTAIISGLSKEGRSEEAFKLYDEMTEAG 311
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 12/274 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+ E G T+ LI C GE+ A +V ++++ + YN ++ G
Sbjct: 62 LTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNE-MQTRGLDVNQL--IYNTLID---G 115
Query: 58 IRQYKLIEWVYQQ---MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ LI+ ++ M +G+ DI T N + +L + ++ R L M G P+
Sbjct: 116 YCKRGLIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPN 175
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+Y L+ + K + A L MK+ G +P+ + + L+DG S+ G + D
Sbjct: 176 VVSYTTLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRD 235
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM KG PD+ YT ++ G+L+ A +LF+ + KG NV TY ++I G G
Sbjct: 236 EMRAKGIFPDIYTYTSLLHGECIFGKLDDAVELFNEVRQKGLPLNVVTYTAIISGLSKEG 295
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ +EA + EM G P+ VY +LVS+L A
Sbjct: 296 RSEEAFKLYDEMTEAGLTPDDRVYTSLVSSLHKA 329
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 35/264 (13%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+E ++++M ++G DI Y +V+ ++G + L DE+ G + HTY L+
Sbjct: 20 VERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFDELTEKGLVANVHTYGALID 79
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC-------------- 169
+ K + AA L+N M+ G D + L + TL+DG + G +D
Sbjct: 80 GVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRGLIDEAFKVQVIMEKKGFEN 139
Query: 170 ---------------------KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
K + M KG +P+VV YT +I Y G +A+ LF
Sbjct: 140 DIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYTTLIDIYCKEGNFVEAKKLF 199
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M G PN TYN +I G G+ EA + EM ++G P+ Y +L+
Sbjct: 200 QEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAKGIFPDIYTYTSLLHGECIF 259
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
GKL +A E+ + +KG +++V+
Sbjct: 260 GKLDDAVELFNEVRQKGLPLNVVT 283
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 35/241 (14%)
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+ TY +++ GK+D+ R+ +EM G D H Y ++++ K A L +
Sbjct: 1 VATYTLLIDWHGSSGKIDEVERMFEEMCEKGIKADIHVYTVVINWNCKIGNTKRAFALFD 60
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
+ E G +V + L+DG+ +AG ++A + +EM +G + + Y +I Y G
Sbjct: 61 ELTEKGLVANVHTYGALIDGVCKAGEMEAAEILVNEMQTRGLDVNQLIYNTLIDGYCKRG 120
Query: 200 ELEKA-------------QDLF------DG----------------MITKGQLPNVFTYN 224
+++A D++ DG MI KG +PNV +Y
Sbjct: 121 LIDEAFKVQVIMEKKGFENDIYTLNTIADGLRKLNQPEEAKRWLLTMIEKGVVPNVVSYT 180
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I +C G F EA + +EM+ G PN + YN L+ G++ EA+E+ M K
Sbjct: 181 TLIDIYCKEGNFVEAKKLFQEMKKAGGEPNAVTYNVLIDGHSKKGRMKEAYELRDEMRAK 240
Query: 285 G 285
G
Sbjct: 241 G 241
>gi|218200036|gb|EEC82463.1| hypothetical protein OsI_26904 [Oryza sativa Indica Group]
Length = 346
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLL 103
SYN +L AL + + + MS E + P+ ++Y ++M A + DQ LL
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAVGLL 138
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
M +G D TY L+ L + A+ L+ M E G +P+V+ +++L+ G ++
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + F EM+ KG PDVV YT +I S G+ +KA + D M+ +G PNV TY
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
N +I C G EA ++K+M +G P+ + YNTL+ L + ++ EA ++ MV
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMG---RSGFSPDFHTYNILLHVLGKGDKPLAAL 135
D ++YN V+ A R G D+ LL M P+ +Y +L+ L + A+
Sbjct: 76 DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRRADQAV 135
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL M+ G V+ + TL+ GL A +D EM G P+VV Y+ ++ Y
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+G E +F M KG P+V Y +I C GK +A +M M RG PN
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN L++ + G + EA V++ M EKG
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKG 285
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP SY ++ AL R+ + + M G D++TY ++ ++D+
Sbjct: 112 RPNAVSYTVLMRALCADRRADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ EM SG P+ Y+ LL K + + M E G +P V+ +T L+D L
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G D M +G P+VV Y V+I G +++A + M KG P+V
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEM 246
TYN++I+G + DEA +++EM
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEM 316
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++ L+ + G V + F++ P Y ++ +L + +
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V M G P+++TYN+++ + G + + +L +M G +PD TYN
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 121 LLHVLGKGDKPLAALNLLNHM 141
L+ L + A+ LL M
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEM 316
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARK---VVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G + LI + +VG A+K V++ ++ L P +YN +++ +
Sbjct: 211 MSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL---EPNVVTYNVLINCMCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
K V ++MS++G APD++TYN ++ + ++D+ LL+EM R
Sbjct: 268 EGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 15/286 (5%)
Query: 7 PTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
P T TFN LI V L ++V R + LF +Y +++ L
Sbjct: 183 PNTV-TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLF-------TYGTVVNGLCKRG 234
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
L + ++M D++ Y ++ A ++ L EM G P+ TYN
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L + A LL+ M E +P+V+ F+ L+D + G L + +DEM +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD+ Y+ +I + L++A+ +F+ MI+K PNV TYN++I+GFC A + +E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM RG N + YNTL+ L AG A ++ + MV G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 151/313 (48%), Gaps = 43/313 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++NILI C ++ LA V+ + +K + P + +++L+ ++ +
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMK---LGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK- 127
QM Y P+ +T+N ++ + K + L+D M G PD TY +++ L K
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
GD LA L+LL M++ + V+ +TT++D L N++ F EM NKG P+VV
Sbjct: 234 GDIDLA-LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 188 Y-----------------------------------TVMITSYIAAGELEKAQDLFDGMI 212
Y + +I +++ G+L +A+ L+D MI
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ P++FTY+S+I GFCM + DEA M + M S+ C PN + YNTL+ A ++
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVE 412
Query: 273 EAHEVIRHMVEKG 285
E E+ R M ++G
Sbjct: 413 EGMELFREMSQRG 425
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 140/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N LI C G A +++ I+ K+ P +++A++ A
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI---NPNVVTFSALIDAF-- 335
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++ KL+E +Y +M PDI TY+ ++ +LD+ + + M P+
Sbjct: 336 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 395
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L+ K + + L M + G + + + TL+ GL +AG+ D + F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PD++ Y++++ G+LEKA +F+ + P+++TYN MI G C AGK
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + + +G PN ++Y T++S G EA + R M E G
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 133/265 (50%), Gaps = 3/265 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ LA ++++ K K+ Y I+ AL + ++ +M ++G
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKI---EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+++TYN ++ G+ RLL +M +P+ T++ L+ K K + A
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L + M + DP + +++L++G LD K+ F+ M +K C P+VV Y +I +
Sbjct: 347 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A +E+ +LF M +G + N TYN++I+G AG D A + K+M S G P+ +
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHM 281
Y+ L+ L GKL +A V ++
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYL 491
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 8/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE TF+ LI G++ A K+ + IK + P +Y+++++
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI---DPDIFTYSSLINGFCM 372
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++ M + P+++TYN ++ + ++++ L EM + G + T
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ L + A + M G P ++ ++ L+DGL + G L+ F+ +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD+ Y +MI AG++E DLF + KG PNV Y +MI GFC G +
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV-SNLRNAGKLAEAHEVIRHM 281
EA + +EM+ G PN YNTL+ + LR+ K A A E+I+ M
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASA-ELIKEM 596
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 135/278 (48%), Gaps = 7/278 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T++ LI C + A+ + E I F P +YN ++
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF---PNVVTYNTLIKGFCK 407
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G + +TYN ++ ++ G D ++ +M G PD T
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIIT 467
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K K AL + ++++ +P + + +++G+ +AG ++ F ++
Sbjct: 468 YSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 527
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V+ YT MI+ + G E+A LF M G LPN TYN++IR G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKA 587
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ ++KEM S G + ++V N+ + G+L +++
Sbjct: 588 ASAELIKEMRSCGFVGDASTI-SMVINMLHDGRLEKSY 624
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 113/234 (48%), Gaps = 1/234 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M P I+ +N ++ A ++ K D L + M S D ++YNIL++
Sbjct: 67 LFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFC 126
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + AL +L M ++G++P ++ ++L++G + D+M P+ V
Sbjct: 127 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I + +A L D M+ +G P++FTY +++ G C G D A +++K+M
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
E + ++Y T++ L N + +A + M KG ++V+ + RC
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT-YNSLIRC 299
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
KLD L EM +S P +N LL + K +K ++L M+ + + +
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L++ R L +M G PD+V + ++ Y + +A L D M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PN T+N++I G + K EA ++ M +RGC P+ Y T+V+ L G + A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 275 HEVIRHMVEKGK 286
+++ M EKGK
Sbjct: 240 LSLLKKM-EKGK 250
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 41/177 (23%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
M+ +G P T++IL+ C G++ A V E KSK+ P +YN ++
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM---EPDIYTYNIMIEGMCK 512
Query: 54 --------------ALLGIRQYKLI-----------------EWVYQQMSDEGYAPDILT 82
+L G++ +I + ++++M ++G P+ T
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
YN ++ A+ R G L+ EM GF D T ++++++L G + L +L+
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEMLS 629
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 150/323 (46%), Gaps = 49/323 (15%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWV 67
T NI+I C ++G A + + K + P ++N +L+ L L R ++ +E V
Sbjct: 127 TLNIMINCFCRRRKLGFAFSAMGKIFK---LGYEPNTVTFNTLLNGLCLEGRVFEAVELV 183
Query: 68 YQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
M + PD++T N + +C K R+ + L+ M +G P+ TY +L+
Sbjct: 184 -DCMVLSQHVPDLITLNTIVNGLCLKDRVS---EAVDLIARMMANGCQPNQFTYGPILNR 239
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC--- 181
+ K +AL+LL M+ P V+ +T ++D L + G LD FF EM KG
Sbjct: 240 MCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKAN 299
Query: 182 --------------------------------MPDVVCYTVMITSYIAAGELEKAQDLFD 209
P+VV ++ +I S + G+L +A+DL++
Sbjct: 300 VFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYN 359
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
MIT+G PN TYNS+I G C + DEA MM M S+GC+P+ YN L++ A
Sbjct: 360 EMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAK 419
Query: 270 KLAEAHEVIRHMVEKGKYIHLVS 292
++ + + R M +G V+
Sbjct: 420 QVDDGMRLFRKMSLRGMIADTVT 442
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 7/263 (2%)
Query: 19 TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAP 78
T + L RK+ R IK P +Y I+ L + + +M +G
Sbjct: 246 TASALDLLRKMEHRKIK-------PHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKA 298
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ TYN ++ + G+ D +LL +M +P+ T++ L+ L K K A +L
Sbjct: 299 NVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLY 358
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
N M G +P+ + + +L+ GL LD D M +KGC PD+ Y ++I + A
Sbjct: 359 NEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKA 418
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
+++ LF M +G + + TY+++I+GFC + K A + +EM S+G +P + Y
Sbjct: 419 KQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTY 478
Query: 259 NTLVSNLRNAGKLAEAHEVIRHM 281
L+ L + G+L EA ++ M
Sbjct: 479 AILLDGLCDNGELEEALGILDQM 501
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN+++ + ++ + + M P+++T++ ++ + + GKL + L +EM
Sbjct: 302 TYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEM 361
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ TYN L++ L + A +++ M G DP + + L++G +A +
Sbjct: 362 ITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQV 421
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F +M+ +G + D V Y+ +I + + +L A+ +F M+++G P + TY +
Sbjct: 422 DDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAIL 481
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G C G+ +EA ++ +M + +YN ++ + NA K+ +A + + KG
Sbjct: 482 LDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKG 540
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 123/285 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI TF+ LI + + G + + + + P +YN++++ L ++
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKR 385
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M +G PDI TYNI++ + ++D RL +M G D TY+
Sbjct: 386 LDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYST 445
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + K + A + M G P ++ + L+DGL G L+ D+M
Sbjct: 446 LIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCK 505
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D+ Y ++I A +++ A LF + +KG ++ +YN M+ G C EA
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++M+ G P+ YNTL+ + + ++I M G
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCG 610
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 112/242 (46%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +N + L +QY L+ + +QM +G A D+ T NI++ R KL
Sbjct: 88 PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ ++ + G+ P+ T+N LL+ L + A+ L++ M P ++ T+++GL
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ M GC P+ Y ++ +G A DL M + P+V T
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +I C G+ D+A + EME++G N YN+L+ + + G+ + +++R M+
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327
Query: 283 EK 284
+
Sbjct: 328 TR 329
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++Q M P ++ +N + R + D L +M G + D +T NI+++
Sbjct: 77 LFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFC 136
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ K A + + + ++G++P+ + F TL++GL G + D M +PD++
Sbjct: 137 RRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLI 196
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
++ + +A DL M+ G PN FTY ++ C +G A ++++M
Sbjct: 197 TLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKM 256
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
E R P+ + Y ++ NL G+L +A M KG Y L+ F + R
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGR 315
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 7/170 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ IL+ C GE+ A ++++ K K+ YN I+H +
Sbjct: 466 MVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKM---ELDIGIYNIIIHGMCN 522
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + +G DI +YNI++ + L + L +M G+ PD T
Sbjct: 523 ANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCT 582
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
YN L+ +G+ ++ L+ MK GF +MD LS +G LD
Sbjct: 583 YNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLS-SGELD 631
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 93/242 (38%), Gaps = 42/242 (17%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+NILI C +V ++ F K L +Y+ ++
Sbjct: 396 MVSKGCDPDIWTYNILINGFCKAKQVDDGMRL---FRKMSLRGMIADTVTYSTLIQGFCQ 452
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA-------KYRLGKLDQFHR--------- 101
R+ + + V+Q+M +G P I+TY I++ + LG LDQ H+
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512
Query: 102 -------------------LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
L + G D +YNI+L L K A L MK
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G++P + TL+ R ++ +EM G D + + +++GEL+
Sbjct: 573 EDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKI-VMDMLSSGELD 631
Query: 203 KA 204
K+
Sbjct: 632 KS 633
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
SYN +L L + ++++M ++GY PD TYN ++ A R + +L++E
Sbjct: 546 QSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEE 605
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
M R GFS D T I++ +L G+ + LN+L+
Sbjct: 606 MKRCGFSSDASTVKIVMDMLSSGELDKSFLNMLS 639
>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
Length = 564
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G TF +LI + GL + + F K K+ P +YN +++ G +
Sbjct: 223 MGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGK 282
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +M + G +++TYN ++ R ++ + +L+D+M ++ SP+ TYN
Sbjct: 283 ICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNT 342
Query: 121 LLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ +G DK A +LL+ +K G PS++ + L++G S+AGN EM
Sbjct: 343 LIGGFCDVGNLDK---ASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P V TV+I +Y+ E+EKA ++ M G +P+V+ Y +I G CM G
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E+ + + M P+ ++YNT++ A ++R M KG
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKG 507
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 107/217 (49%), Gaps = 4/217 (1%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ D G +P+++ Y ++ + G +++ D+MG G + +T+ +L++ L K
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGL 247
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF--FDEMANKGCMPDVVCY 188
+L MK G P++ + LM+ G + C+ F FDEM +G +VV Y
Sbjct: 248 KKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKI--CRAFDLFDEMRERGVEANVVTY 305
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I + +A+ L D M PN+ TYN++I GFC G D+A +++ +++S
Sbjct: 306 NTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKS 365
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G +P+ + YN L+ AG ++ R M +G
Sbjct: 366 NGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRG 402
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 123/253 (48%), Gaps = 5/253 (1%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
FRP N +N++L +L+ ++ W++ E D+ ++ I++ G LD+
Sbjct: 126 FRP--NIFNSLLGSLVRSNCFEK-AWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSF 182
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+LL + G SP+ Y L+ K GD A L + M E+G + FT L++G
Sbjct: 183 QLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARL-FFDKMGEMGLVANQYTFTVLING 241
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G F++M G P++ Y ++ Y G++ +A DLFD M +G N
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEAN 301
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TYN++I G C + EA ++ +M+ +PN + YNTL+ + G L +A ++
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361
Query: 280 HMVEKGKYIHLVS 292
+ G LV+
Sbjct: 362 QLKSNGLSPSLVT 374
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 107/218 (49%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M + G + T+ +++ ++ G L ++M +G P+ +TYN L++
Sbjct: 220 FDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCG 279
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A +L + M+E G + +V+ + TL+ G+ R + + D+M P+++
Sbjct: 280 EGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLIT 339
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I + G L+KA L D + + G P++ TYN +I G+ AG + + +EME
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
RG +P+ + L+ ++ +A ++ M + G
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFG 437
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 15/191 (7%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
KL L+ ++ + S F T LLH L + P LL +
Sbjct: 52 KLPHAQSLILQILSNKISSPFFTVPSLLHHLTQNQNPSMTTALL--------------YE 97
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
++++ ++ LD FF+EM +KG + + ++ S + + EKA F+ + +
Sbjct: 98 SIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFFNELKER 157
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ +V+++ MI+G C G D++ ++ ++ G +PN ++Y TL+ G + A
Sbjct: 158 VKF-DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERA 216
Query: 275 HEVIRHMVEKG 285
M E G
Sbjct: 217 RLFFDKMGEMG 227
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E GFP + +NILI C G + A+ + K L RP S+N +++ L
Sbjct: 214 ILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGL---RPTTVSFNTLINGLCK 270
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + + M + PD+ TY++++ + G+LD +L DEM + G P+ T
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ + + +A+N + M +G P ++ + TL++GL + G+++ + DEM
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD + YT +I Y G+LE A ++ GM +G + + + ++I GFC G+
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++EM G P+ Y ++ G + ++++ M G
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQING 498
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 8/294 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ L+ + G ++ F + NF+ PF + +L ++ I Y ++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPF-HGCGYLLDKMINSNSPVTIWTFYSEI 214
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G+ P + YNI++ + G + + +E+ + G P ++N L++ L K
Sbjct: 215 LEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNL 274
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L M+E P V ++ L+ GL + G LD + FDEM +G P+ + +T +
Sbjct: 275 DEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTAL 334
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + ++ A + + M+T G P++ YN+++ G C G ++A ++ EM+ G
Sbjct: 335 IDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGM 394
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
P+ + Y TL+ G L A E+ + M E+G + L+S F R R
Sbjct: 395 KPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 136/305 (44%), Gaps = 15/305 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M EN T+++LI C G + +A ++ + + L RP ++ A++
Sbjct: 284 MEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL---RPNGITFTALIDGQYR 340
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ Y QM G PD++ YN ++ ++G +++ +L+DEM G PD T
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K +A+ + M E G + FT L+ G R G + + EM
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD YT++I Y G ++ L M G P V TYN ++ G C G+
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
A +++ M + G P+ + YN L+ GK A ++++ EKG Y LV
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577
Query: 292 SKFKR 296
S++ +
Sbjct: 578 SEYNK 582
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 131/247 (53%), Gaps = 8/247 (3%)
Query: 43 PFKNSYNAILHALLG----IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
P ++N +++ L +R KL++ M +G P+ +TYN ++ GKLD+
Sbjct: 240 PSSVTFNVLINGLCKKGDMVRVTKLVD----NMFLKGCVPNEVTYNTIINGLCLKGKLDK 295
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
LLD M S P+ TY L++ L K + + ++LL+ ++E G + ++TL+
Sbjct: 296 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 355
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL + + + +M KGC P++V Y+ +I G+L++A+++ M+ KG P
Sbjct: 356 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 415
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N FTY+S+I+GF G +A + KEM C PN + Y+ L+ L GKL EA +
Sbjct: 416 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 475
Query: 279 RHMVEKG 285
HM+ +G
Sbjct: 476 THMLGRG 482
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 137/280 (48%), Gaps = 4/280 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T R+FN ++ + GL + +E + + K N P S+N ++ A+ +
Sbjct: 134 TVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT-NISPNVLSFNLVIKAMCKLGLVDRAI 192
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V+++M+ + PD+ TY +M + ++D+ LLDEM G P T+N+L++ L
Sbjct: 193 EVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGL 252
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + L+++M G P+ + + T+++GL G LD D M C+P+
Sbjct: 253 CKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPND 312
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I + G L + +G N + Y+++I G K +EA + K+
Sbjct: 313 VTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 372
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M +GC PN +VY+ L+ L GKL EA E++ MV KG
Sbjct: 373 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 11/286 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVER-FIKSKLFNFRPFKNSYNAILHALLG 57
IE FP++ TFN+LI C G++ K+V+ F+K + P + +YN I++ L
Sbjct: 235 IEGCFPSSV-TFNVLINGLCKKGDMVRVTKLVDNMFLKGCV----PNEVTYNTIINGLCL 289
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDEMGRSGFSPDFH 116
+ + +M P+ +TY ++ + G+ +D H LL + G + +
Sbjct: 290 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVH-LLSSLEERGHHANEY 348
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y+ L+ L K +K A+ L M E G P+++ ++ L+DGL R G LD K EM
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
NKGC P+ Y+ +I + G +KA ++ M +PN Y+ +I G C GK
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
EA M M RG P+ + Y++++ L NAG + ++ M+
Sbjct: 469 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 99 FHRLLD-----EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
FHR L+ G++ SP+ ++N+++ + K A+ + M +P V +
Sbjct: 151 FHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTY 210
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
TLMDGL + +D DEM +GC P V + V+I G++ + L D M
Sbjct: 211 CTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 270
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG +PN TYN++I G C+ GK D+A +++ M + C PN + Y TL++ L G+ +
Sbjct: 271 KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVD 330
Query: 274 AHEVIRHMVEKGKY 287
++ + E+G +
Sbjct: 331 GVHLLSSLEERGHH 344
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 2/222 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++ L + + ++++M ++G P+I+ Y+ ++ R GKLD+ +L EM
Sbjct: 349 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 408
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P+ TY+ L+ K A+ + M + P+ + ++ L+ GL G L
Sbjct: 409 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 468
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK--GQLPNVFTYN 224
+ M +G PDVV Y+ MI AG +E LF+ M+ + P+V TYN
Sbjct: 469 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 528
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
++R C A ++ M RGCNP+ + N ++ LR
Sbjct: 529 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALR 570
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G A T++ LI + G ++K + + + N P + Y+ ++H L +
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 467
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFHTY 118
+ ++ M G PD++ Y+ ++ G ++ +L +EM S PD TY
Sbjct: 468 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 527
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA-CKYFFDEMA 177
NILL L K + A++LLN M + G +P ++ ++ L N + F DE
Sbjct: 528 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDE-- 585
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
++ + A + + M+ K PN T+ +I C K
Sbjct: 586 -------------LVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 630
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 128/246 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ AL + M + G PD++T+N +M + + +L D
Sbjct: 290 TYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTF 349
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +PD +YNIL+ K ++ AL+L N M P+++ +++L+DGL ++G +
Sbjct: 350 AECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRI 409
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F + + G P+V+ Y +M+ + ++KA +LF+ M +G PNV +YN +
Sbjct: 410 SYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNIL 469
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I G+C + + DEA + +EM R P+ + YN L+ L +G+++ A E+ M + G
Sbjct: 470 INGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGP 529
Query: 287 YIHLVS 292
+ +++
Sbjct: 530 PVDVIT 535
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 130/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ GF T+ LI ++GL R+ E K + RP YN I+ L
Sbjct: 174 VVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGL 233
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y + G PD+ TY ++ LG+ + RLL +M + + +TYNI
Sbjct: 234 VTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNI 293
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A ++ N M E G P ++ F TLM G ++ + FD A G
Sbjct: 294 LIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECG 353
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV Y ++I Y +++A LF+ M K PN+ TY+S+I G C +G+ A
Sbjct: 354 ITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAW 413
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + G +PN + YN ++ L + +A E+ M E+G
Sbjct: 414 ELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERG 458
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 125/259 (48%), Gaps = 2/259 (0%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRL 93
++L P + +N IL +++ ++ Y + +QM G P I+T +I++ L
Sbjct: 67 TRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHL 126
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G + +L + + G+ + T ++ L + AL + + GF + +
Sbjct: 127 GHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTY 186
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
TL++GL + G +M + P+VV Y +++ G + +A+DL+ ++
Sbjct: 187 GTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVG 246
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G P+VFTY +I GFC G++ E ++ +M R N N YN L+ L G L +
Sbjct: 247 RGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGK 306
Query: 274 AHEVIRHMVEKGKYIHLVS 292
AH++ M+E+G+ LV+
Sbjct: 307 AHDMRNLMIERGQRPDLVT 325
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKV----VERFIKSKLFNFRPFKNSYNAILH 53
M++ T+NILI C G +G A + +ER + L F + Y + +
Sbjct: 279 MVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGY-CLYN 337
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
++ R+ ++ ++ G PD+ +YNI++ + ++D+ L ++M +P
Sbjct: 338 DVVEARK------LFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAP 391
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+ L+ L K + A L + + + G P+V+ + ++D L + +D F
Sbjct: 392 NIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELF 451
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ M +G P+V Y ++I Y + +++A +LF+ M + +P+ TYN +I G C +
Sbjct: 452 NLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKS 511
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTL 261
G+ A + M G + + YN L
Sbjct: 512 GRISHAWELFNVMHDGGPPVDVITYNIL 539
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 109/233 (46%), Gaps = 6/233 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G TFN L+ C +V ARK+ + F + + P SYN ++
Sbjct: 314 MIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI---TPDVWSYNILIIGYCK 370
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M+ + AP+I+TY+ ++ + G++ L + G SP+ T
Sbjct: 371 NNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVIT 430
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L K A+ L N M E G P+V + L++G ++ +D F+EM
Sbjct: 431 YNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMH 490
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+ +PD V Y +I +G + A +LF+ M G +V TYN + F
Sbjct: 491 RRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAF 543
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDE 74
+C G + A ++ S + + P N +YN +L AL I+ ++ M +
Sbjct: 403 LCKSGRISYAWELF-----SAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFER 457
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G P++ +YNI++ + ++D+ L +EM R PD TYN L+ L K + A
Sbjct: 458 GLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHA 517
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L N M + G V+ + L D S+
Sbjct: 518 WELFNVMHDGGPPVDVITYNILFDAFSK 545
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 47/92 (51%)
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
++ A LF +IT LP+V +N ++ + A ++ K+M RG P+ + +
Sbjct: 59 IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L++ + G + A V+ ++++G ++ ++
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAIT 150
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 134/277 (48%), Gaps = 7/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FNILI C +V A KV F + P +Y IL + E V+
Sbjct: 160 SFNILIKALCKKNDVENALKV---FDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVF 216
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++SD+G+ PD TY ++M + G+L +++D M +G P+ TY +++ K
Sbjct: 217 SEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKE 276
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A NL++ M + F PS ++D L G ++ + + M K C+PD
Sbjct: 277 KKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIM 336
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I G++ +A+ LFD +G +P++ TYN++I G C G+ +EA + +M
Sbjct: 337 STLIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVE 395
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C PN YN L+ AG + E ++ M++ G
Sbjct: 396 KRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNG 432
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 116/249 (46%), Gaps = 16/249 (6%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMS---------DEGYAPDILTYNIVMCAKYRLGKL 96
++Y++I+ L R + +E + Q+S D+ + I Y + + RL L
Sbjct: 50 DTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLA--GRPRLA-L 106
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK-PLAALNLLNHMKEVGFDPSVLHFTT 155
F R+ +E P N LL+V + + L L N + G P+V F
Sbjct: 107 KTFTRIKEEFS---MQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNI 163
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+ L + +++ FDEM G +P++V YT ++ +++ G+L A+ +F + KG
Sbjct: 164 LIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKG 223
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
LP+ TY ++ G+C G+ +A +M ME G PN + Y ++ K EA
Sbjct: 224 WLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEAR 283
Query: 276 EVIRHMVEK 284
+I M++K
Sbjct: 284 NLIDDMLDK 292
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
G P+ ++NIL+ L K + AL + + M +G P+++ +TT++ G G+L
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ F E+++KG +PD YTV++ Y G L A + D M G PN TY MI
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDA 272
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+C K EA ++ +M + P+ + ++ L GK+ A + + M+EK
Sbjct: 273 YCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEK 327
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 16/221 (7%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR--SGFSPDFHTYNILLHVLGKGDKPL 132
G++ TY+ ++ R D LL ++ R S + ++ G +P
Sbjct: 44 GFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPR 103
Query: 133 AALNLLNHMKE-VGFDPSVLHFTTLMDGLSR-------AGNLDACKYFFDEMANKGCMPD 184
AL +KE PSV TL++ + L CK + G +P+
Sbjct: 104 LALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKY------GVLPN 157
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V + ++I + ++E A +FD M T G +PN+ TY +++ GF G A +
Sbjct: 158 VFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFS 217
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E+ +G P+ Y L+ G+L++A +V+ +M G
Sbjct: 218 EISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNG 258
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 19/287 (6%)
Query: 27 RKVVERFIKSKLFN--FRPFKNS-----------YNAILHALLGIRQYKLIEWVYQQMSD 73
RKV+E +K K F + +K +N ++H ++ V+ ++
Sbjct: 109 RKVLEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITK 168
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P ++++N +M RLG LD+ RL M SG PD +TY++L++ L K K
Sbjct: 169 WGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDD 228
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M + G P+ + FTTL+DG + G +D + +M ++ PD++ Y +I
Sbjct: 229 ANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIY 288
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G+L++AQDL D M KG P+ +Y ++I G C G + A K M
Sbjct: 289 GLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRL 348
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLVSKF 294
+ + Y L+S L G+ +A +++R M+ + G Y ++++F
Sbjct: 349 DDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEF 395
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 136/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A V + K + RP S+N +++ +
Sbjct: 131 ILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITK---WGLRPSVVSFNTLMNGYIR 187
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 188 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 247
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM
Sbjct: 248 FTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMR 307
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A + MI + + Y ++I G C G+
Sbjct: 308 MKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSI 367
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + ++++ M G +V+
Sbjct: 368 DAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 422
>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 140/290 (48%), Gaps = 42/290 (14%)
Query: 34 IKSKLFNFRPFKN------SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
+ SKLF+ P + +Y ILHA +Y ++++M++ G +P ++TYN+++
Sbjct: 205 VASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVML 264
Query: 88 CAKYRLGK-LDQFHRLLDEM-------------------GRSG----------------F 111
++G+ D+ LLDEM GR G +
Sbjct: 265 DVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGY 324
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
P TYN LLHV GK AL++L+ M+E P + + ++ RAG +
Sbjct: 325 KPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAV 384
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
D MA+KG MP+ V YT +I +Y G+++KA ++FD M+ G +PNV TYN+++
Sbjct: 385 VIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLG 444
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+E ++ M+ GC+PN + +NT+++ G ++V R M
Sbjct: 445 KKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREM 494
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 137/314 (43%), Gaps = 35/314 (11%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG T+N ++ CG+ G+ + V + F + K F P ++++N ++ A
Sbjct: 462 NGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNND 521
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++++M G++P I TYN ++ A R G ++ +M GF P +Y++++H
Sbjct: 522 AAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVH 581
Query: 124 VLGKGDKP---------------------LAALNLLN--------------HMKEVGFDP 148
KG L L L N +++ G+ P
Sbjct: 582 SYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKP 641
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ +++ ++ D + + G PD+V + ++ Y G+ KA+++
Sbjct: 642 DLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVL 701
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ T G P++ +YN++I+GFC G E ++ EM S G P YNT +S
Sbjct: 702 RMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQ 761
Query: 269 GKLAEAHEVIRHMV 282
G E ++VI +M+
Sbjct: 762 GMFTEINDVISYMI 775
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 107/258 (41%), Gaps = 36/258 (13%)
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q+ + ++ + + Y D+ Y ++ A R GK + + + M SG SP TYN
Sbjct: 202 QHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYN 261
Query: 120 ILLHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF----- 173
++L V GK G L LL+ M+ G D +T++ R G +D + FF
Sbjct: 262 VMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKS 321
Query: 174 ------------------------------DEMANKGCMPDVVCYTVMITSYIAAGELEK 203
EM C PD V Y ++ +Y+ AG E+
Sbjct: 322 EGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEE 381
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
+ D M +KG +PN TY ++I + G D+A M +M GC PN YN ++
Sbjct: 382 GAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLG 441
Query: 264 NLRNAGKLAEAHEVIRHM 281
L E +++ HM
Sbjct: 442 MLGKKSLSEEMMKILGHM 459
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 140/293 (47%), Gaps = 2/293 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR- 59
M+E G T+N ++ G+ L+ ++++ KL P ++N +L A+ G +
Sbjct: 424 MMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTML-AMCGKKG 482
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+K + V+++M + G+ PD T+N ++ A R G + ++ +EM ++GFSP +TYN
Sbjct: 483 MHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYN 542
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL+ L + AA +++ M+ GF PS ++ ++ ++ GN+ + + +
Sbjct: 543 ALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDG 602
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P + ++ + L + F + G P++ NSM+ F +D A
Sbjct: 603 DIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRA 662
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M++ + G P+ + +N+L+ G +A EV+R + G LVS
Sbjct: 663 HEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVS 715
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 5/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G+ T+N L+ G+ G+ + + + + N P +YN ++ A + ++
Sbjct: 323 GYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEG 382
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V M+ +G P+ +TY ++ A R+G +D+ + D+M G P+ TYN +L +
Sbjct: 383 AVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGM 442
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
LGK + +L HMK G P+ + + T++ + G F EM N G PD
Sbjct: 443 LGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPD 502
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ +I++Y G A + + MI G P + TYN+++ G + A +++
Sbjct: 503 RDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVIL 562
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+M ++G P+ Y+ +V + G + M+EK Y
Sbjct: 563 DMRNKGFRPSETSYSLMVHSYAKGGNVKGI-----EMIEKSIY 600
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 117/278 (42%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ GF T+N L+ G + + + FRP + SY+ ++H+
Sbjct: 529 MIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGN 588
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K IE + + + D P + ++ A ++ L R + + G+ PD N
Sbjct: 589 VKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNS 648
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L + K + A +L + + G P ++ +LMD +R G+ + + G
Sbjct: 649 MLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSG 708
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I + G +++ + M + G P +FTYN+ I G+ G F E
Sbjct: 709 GKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEIN 768
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
++ M C PN L Y + A + EA + +
Sbjct: 769 DVISYMIVHNCRPNELTYKIVADGYCKARRYDEAIDFV 806
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 85/208 (40%), Gaps = 36/208 (17%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D H +++ +LG+ + A L + + + V +TT++ SR G F
Sbjct: 186 DRHAIELMVRILGRESQHTVASKLFDVIPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIF 245
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGE--------------------------------- 200
+ M G P +V Y VM+ Y G
Sbjct: 246 ERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGR 305
Query: 201 ---LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+++A++ F G+ ++G P TYN+++ F AG F EA +++ EME C P+ +
Sbjct: 306 EGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVT 365
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN +V+ AG E VI M KG
Sbjct: 366 YNEVVAAYVRAGFHEEGAVVIDAMASKG 393
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 127/267 (47%), Gaps = 3/267 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T T+ + G+V R + E K + F P SY+ ++H L Q + +
Sbjct: 25 TLLNTYMDCVFKAGDVEKGRAIFEDI---KGYGFLPDVRSYSILIHGLTKAGQARETSSI 81
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M G+A D YN V+ + GK+D+ + L+EM P TY ++ L K
Sbjct: 82 FHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAK 141
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D+ A L K G + +V+ +++L+DG + G +D +EM KG P+V
Sbjct: 142 IDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYT 201
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++ + + A E+ +A F M PN +TY+ +I G C K+++A +EM+
Sbjct: 202 WNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ 261
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+G PN + Y T++S L G + +A
Sbjct: 262 KQGLVPNVVTYTTMISGLAKVGNITDA 288
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 145/292 (49%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF AR +N ++ C G+V A + +E K+ + P +Y +I+ L
Sbjct: 85 MKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM---KVKHVPPTVATYGSIIDGLAK 141
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +L+EM + G +P+ +T
Sbjct: 142 IDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYT 201
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L K ++ AL MKE+ P+ ++ L++GL R + F+ EM
Sbjct: 202 WNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQ 261
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VV YT MI+ G + A LF+ G +P+ ++N++I G A +
Sbjct: 262 KQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAI 321
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
EA + +E RGC N +L+ L A + +A V + E K H
Sbjct: 322 EAYHVFEETRLRGCRINVKACISLLDALNKAECIEQAAVVGAVLREIAKSHH 373
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 110/217 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M+ G PD+ N M ++ G +++ + +++ GF PD +Y+IL+H L
Sbjct: 11 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + ++ + MK+ GF + ++DG ++G +D +EM K P V
Sbjct: 71 KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVA 130
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I L++A LF+ +KG NV Y+S+I GF G+ DEA +++EM
Sbjct: 131 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 190
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+G PN +N+L+ L A ++ EA + M E
Sbjct: 191 MKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKE 227
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 115/226 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ + G+ PD+ +Y+I++ + G+ + + M + GF+ D YN ++
Sbjct: 46 IFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFC 105
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A L MK P+V + +++DGL++ LD F+E +KG +V+
Sbjct: 106 KSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 165
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + G +++A + + M+ KG PNV+T+NS++ A + +EA + M
Sbjct: 166 VYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSM 225
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ C+PN Y+ L++ L K +A + M ++G ++V+
Sbjct: 226 KEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVT 271
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 93/192 (48%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+ + H++ EM R G PD N + + K + +K GF P V +
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ L+ GL++AG F M +G D Y ++ + +G+++KA + + M
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
K P V TY S+I G + DEA + +E +S+G N +VY++L+ G++ E
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182
Query: 274 AHEVIRHMVEKG 285
A+ ++ M++KG
Sbjct: 183 AYLILEEMMKKG 194
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%)
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M G P + T MD + +AG+++ + F+++ G +PDV Y+++I
Sbjct: 11 IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AG+ + +F M +G + YN+++ GFC +GK D+A ++EM+ + P
Sbjct: 71 KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVA 130
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
Y +++ L +L EA+ + KG ++++
Sbjct: 131 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVI 165
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 120/219 (54%), Gaps = 1/219 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
VY +M++ +PD + YN ++ R+G++ L + MGR G S + ++NI++ L
Sbjct: 12 VYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-SQNVVSFNIMMRGLF 70
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+++ MK+ GF + + ++DG + G ++ + + KG + D
Sbjct: 71 DNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAF 130
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ MI +L+KA + +GMI G PN YN++I GF A KFD+A + +EM
Sbjct: 131 AYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREM 190
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S C+P + Y+TL++ L + +EA+++++ M+EKG
Sbjct: 191 GSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKG 229
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 131/268 (48%), Gaps = 4/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A++V +SK+ P YNA+L L + + K +++ M +G +
Sbjct: 1 CESGDIDGAKRVYMEMAESKV---SPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG-S 56
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+++++NI+M + G++D+ + + M +SGF D TY I++ K +L++
Sbjct: 57 QNVVSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHV 116
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L + G ++ +++GL + LD + M GC P+ Y +I ++
Sbjct: 117 LEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVG 176
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A + + A +F M + P + TY+++I G C +F EA ++KEM +G P +
Sbjct: 177 ASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVIT 236
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y+ L+ L K+ A ++ ++ KG
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVLSKG 264
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + +G D Y+ ++ + KLD+ +L+ M +SG P+ H YN L++
Sbjct: 116 VLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFV 175
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ + M + P+++ + TL++GL + EM KG P V+
Sbjct: 176 GASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVI 235
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++++ ++E A L++ +++KG P+V +N +I G C GK A + +M
Sbjct: 236 TYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDM 295
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + +NTL+ G + A + ++ G ++S
Sbjct: 296 NHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIIS 341
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 129/277 (46%), Gaps = 6/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++GF + T+ I+I C G + + V+E + K F +Y+A+++ L
Sbjct: 85 MKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLE-IAEGKGGVLDAF--AYSAMINGLCK 141
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ V M G P+ YN ++ K D R+ EMG SP T
Sbjct: 142 EAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVT 201
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L++ L KG++ A +L+ M E G+ P V+ ++ LM GL + ++ ++++
Sbjct: 202 YHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVL 261
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PDV + ++I + G+ + A L+ M PN+ T+N+++ GF G
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIR 321
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A + + G P+ + YN + L + +++ A
Sbjct: 322 NALVIWARILRSGLQPDIISYNITLKGLCSCNRISFA 358
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 111/240 (46%), Gaps = 3/240 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C ++ A V+ IKS +P + YN +++ +G ++ V+++M
Sbjct: 139 LCKEAKLDKAVSVLNGMIKS---GCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDC 195
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+P I+TY+ ++ + + + + L+ EM G+ P TY++L+ L +G K AL
Sbjct: 196 SPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQ 255
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
L N + GF P V L+ GL G + +M + C P++V + ++ +
Sbjct: 256 LWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFY 315
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G++ A ++ ++ G P++ +YN ++G C + A + + ++ P +
Sbjct: 316 KDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTII 375
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLAR--KVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
MI++G A +N LI G VG ++ + F + + P +Y+ +++ L
Sbjct: 155 MIKSGCKPNAHVYNTLIN--GFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKG 212
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++ + ++M ++G+ P ++TY+++M + K++ +L +++ GF PD +
Sbjct: 213 ERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMH 272
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL+H L K AL L M P+++ TLM+G + G++ + +
Sbjct: 273 NILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILR 332
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G PD++ Y + + + + A +TK P + T
Sbjct: 333 SGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376
>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
restorer; AltName: Full=Protein PPR; AltName:
Full=Restorer for CMS; Flags: Precursor
gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
Length = 791
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +M D G PD++TYN ++ A + +D+ +L+ M ++G PD TYN +LH
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+P A+ L M+ G +P V+ ++ LMD L + G + FD M +G P++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ Y G L + L D M+ G P+ + ++ +I + GK D+A + +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G NPN + Y ++ L +G++ +A M+++G
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 144/328 (43%), Gaps = 41/328 (12%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+++L +C G ARK+ + K L +P +Y +L
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL---KPEITTYGTLLQGYAT 348
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD ++I++CA + GK+DQ + +M + G +P+ T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDP------SVLH------------------- 152
Y ++ +L K + A+ M + G P S++H
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 153 ----------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
F +++D + G + + F+ M G P+V+ Y +I Y AG+++
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L GM++ G PN TY+++I G+C + ++A + KEMES G +P+ + YN ++
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
L + A A E+ + E G I L
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIEL 616
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+I+ AL + V M G PD +TYN ++ G+ +
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TY++L+ L K + + A + + M + G P + + TL+ G +
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G PD ++++I +Y G++++A +F M +G PN T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G+ ++A ++M G +P +VYN+L+ L K A E+I M+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 283 EKG 285
++G
Sbjct: 469 DRG 471
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 109/202 (53%), Gaps = 5/202 (2%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-- 144
+CA R D +L M G P+ +YNILL L ++ AL LL+ M +
Sbjct: 132 LCADKRTS--DAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRG 189
Query: 145 -GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P V+ +TT+++G + G+ D + EM ++G +PDVV Y +I + A ++K
Sbjct: 190 GGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDK 249
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A ++ + M+ G +P+ TYNS++ G+C +G+ EA +K+M S G P+ + Y+ L+
Sbjct: 250 AMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMD 309
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 310 YLCKNGRCMEARKIFDSMTKRG 331
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 131/291 (45%), Gaps = 8/291 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ GF A F L+ C A +V R + P SYN +L L
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE--LGCIPNVFSYNILLKGLCD 170
Query: 58 I-RQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
R + +E ++ D G PD+++Y V+ ++ G D+ + EM G PD
Sbjct: 171 ENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPD 230
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN ++ L K A+ +LN M + G P + + +++ G +G F
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G PDVV Y++++ G +A+ +FD M +G P + TY ++++G+ G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E ++ M G +P+ V++ L+ GK+ +A V M ++G
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 401
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 132/323 (40%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G A T+ +I C G V A E+ I L P YN+++H L
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL---SPGNIVYNSLIHGLCT 453
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D G + + +N ++ + + G++ + +L + M R G P+ T
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K A+ LL+ M VG P+ + ++TL++G + ++ F EM
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC------ 231
+ G PD++ Y +++ A++L+ + G + TYN ++ G C
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Query: 232 -----------------------------MAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G+ DEA + S G PN+ Y +
Sbjct: 634 DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
N+ G L E ++ M + G
Sbjct: 694 ENIIGQGLLEELDQLFLSMEDNG 716
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ E ++ +P +YN +++
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR---IGVKPNVITYNTLINGYCL 523
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G P+ +TY+ ++ ++ +++ L EM SG SPD T
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +PN +TY M G +
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + ME GC + + N +V L G++ A + + EK
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H +J + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A L D M KG P+ TY ++I
Sbjct: 265 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVG 382
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ JA+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K D + L DEM G P+
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVX 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 XKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 6/282 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E G R +E + + F ++ +L L+ ++ +KL+ Y+++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGD 129
+ GY + +NI+M + G + + D + + G P +YN L++ LG D
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ L + M G P V ++ L++G + D FDEM KG +P+ V +T
Sbjct: 195 E---GFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFT 251
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + G ++ A +++ M+++ P++ TYN++I G C G +A ++ EM +
Sbjct: 252 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXK 311
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G P+ + Y TL+ G L A E + M+++ + V
Sbjct: 312 GLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXV 353
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 269 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL G + EM + G PD
Sbjct: 329 KEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDAR 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 6/195 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G F LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 238 MLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 294
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +MS +G PD +TY ++ + G LD M + D
Sbjct: 295 KGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVX 354
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + A +L M VG P +T +++ + G++ EM
Sbjct: 355 YTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 178 NKGCMPDVVCYTVMI 192
G +P VV Y V++
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 6/126 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ LI C G++ A + +R I+ N R Y A++ L
Sbjct: 308 MSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQE---NXRLDXVXYTALISGLCX 364
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + ++M G PD TY +++ + G + + +LL EM R G P T
Sbjct: 365 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
Query: 118 YNILLH 123
YN+L++
Sbjct: 425 YNVLMN 430
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 148/291 (50%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF--NFRPFKNSYNAILHALL-- 56
M GF T+NILI + G+ +E K++L N +P +Y ++ A L
Sbjct: 152 MKNKGFSPDIVTYNILIGSLCSRGMLDSALE--FKNQLLKENCKPTVVTYTILIEATLLQ 209
Query: 57 -GIRQ-YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
GI + KL++ +M + PD+ TYN ++ R G +D+ +++ + G++PD
Sbjct: 210 GGIDEAMKLLD----EMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPD 265
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYNILL L K A L++ M G + +V+ ++ L+ + R G ++
Sbjct: 266 VITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLK 325
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M KG PD CY +I + G ++ A ++ D MI+ G +P++ YN+++ C
Sbjct: 326 DMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQK 385
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ DEA ++ +++ GC+PN YN++ S L + G A +I M++KG
Sbjct: 386 RADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKG 436
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 1/235 (0%)
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
++H L + V + + G+ PD++ YN ++ R ++D +++LD M G
Sbjct: 98 LIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG 156
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
FSPD TYNIL+ L +AL N + + P+V+ +T L++ G +D
Sbjct: 157 FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAM 216
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
DEM PD+ Y +I G +++A + + +KG P+V TYN ++RG
Sbjct: 217 KLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGL 276
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GK++ +M +M +RGC N + Y+ L+S++ GK+ E +++ M +KG
Sbjct: 277 LNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKG 331
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNAI+ + V +M ++G++PDI+TYNI++ + G LD +++
Sbjct: 128 AYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQL 187
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ P TY IL+ A+ LL+ M E+ P + + +++ G+ R G +
Sbjct: 188 LKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYV 247
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D +++KG PDV+ Y +++ + G+ E +L M+ +G NV TY+ +
Sbjct: 248 DRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVL 307
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C GK +E ++K+M+ +G P+ Y+ L++ L G++ A EV+ M+ G
Sbjct: 308 ISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 14/293 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E T+N +I C G V A +++ I SK + P +YN +L LL
Sbjct: 222 MLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISS-ISSK--GYAPDVITYNILLRGLLN 278
Query: 58 IRQYKLIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
++ E Y+ MSD G +++TY++++ + R GK+++ LL +M + G PD
Sbjct: 279 QGKW---EAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPD 335
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+ Y+ L+ L K + A+ +L+ M G P ++++ T++ L + D F+
Sbjct: 336 GYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFE 395
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ GC P+ Y M ++ + G +A + M+ KG P+ TYNS+I C G
Sbjct: 396 KLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDG 455
Query: 235 KFDEACTMM--KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
DEA ++ EMES C P+ + YN ++ L ++++A EV+ MV+KG
Sbjct: 456 MVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKG 508
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 140/285 (49%), Gaps = 13/285 (4%)
Query: 3 ENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
EN PT T+ ILI G + A K+++ ++ N +P +YN+I+ G+
Sbjct: 190 ENCKPTVV-TYTILIEATLLQGGIDEAMKLLDEMLE---INLQPDMFTYNSIIR---GMC 242
Query: 60 QYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++ +Q +S +GYAPD++TYNI++ GK + + L+ +M G +
Sbjct: 243 REGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVV 302
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY++L+ + + K + LL MK+ G P + L+ L + G +D D M
Sbjct: 303 TYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVM 362
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ GC+PD+V Y ++ ++A +F+ + G PN +YNSM G
Sbjct: 363 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHK 422
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A M+ EM +G +P+ + YN+L+S L G + EA E++ M
Sbjct: 423 VRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM 467
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 17/235 (7%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKY--------RLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++G+ PD+ V+C K + K Q +L+ G PD
Sbjct: 78 YFLRHLVNKGHKPDV-----VLCTKLIHGLFTSKTIDKAIQVMHILENHGH----PDLIA 128
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ + ++ +A +L+ MK GF P ++ + L+ L G LD+ F +++
Sbjct: 129 YNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL 188
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ C P VV YT++I + + G +++A L D M+ P++FTYNS+IRG C G D
Sbjct: 189 KENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVD 248
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++ + S+G P+ + YN L+ L N GK +E++ MV +G ++V+
Sbjct: 249 RAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 4/134 (2%)
Query: 154 TTLMDGLSR---AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
T L+ LSR AGN + YF + NKG PDVV T +I + ++KA +
Sbjct: 58 THLLKSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHI 117
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ G P++ YN++I GFC A + D A ++ M+++G +P+ + YN L+ +L + G
Sbjct: 118 LENHGH-PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGM 176
Query: 271 LAEAHEVIRHMVEK 284
L A E ++++
Sbjct: 177 LDSALEFKNQLLKE 190
>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 721
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 9/238 (3%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN ++H L R+ + + +G +++TY GK ++ L EMG
Sbjct: 169 YNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY---------YGKFNEAELLFKEMG 219
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G + TY+IL+ + + A+ L+ M + + +V + +L++G + GN
Sbjct: 220 EKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNAS 279
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A KY+FDEM +KG P VV YT +I+ Y GE KA +++ M KG PN +T+ ++I
Sbjct: 280 AAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAII 339
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C A EA + EM+ R P+ + YN ++ +G ++EA ++ MV KG
Sbjct: 340 SGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKG 397
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 145/324 (44%), Gaps = 43/324 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
M E G T++ILI C GE+ A +++ K+ + F P YN++++
Sbjct: 218 MGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP----YNSLINGYC 273
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++ + +M D+G P ++TY ++ G+ + ++ +EM G SP+ +
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+ ++ L + + A+ L MKE PS + + +++G R+GN+ + DEM
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
KG +PD Y +I+ + G + +A++ D + N Y++++ G+C G+F
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453
Query: 237 DEACT-----------------------------------MMKEMESRGCNPNFLVYNTL 261
+A + ++KEM + G P+ ++Y +
Sbjct: 454 KDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNM 513
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ AG L EA + MV++G
Sbjct: 514 IDRHSKAGNLKEAFGLWDIMVDEG 537
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 136/323 (42%), Gaps = 42/323 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T T+ LI C GE A KV + P ++ AI+ L
Sbjct: 288 MIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGI---SPNTYTFTAIISGLCR 344
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +M + P +TYN+++ R G + + LLDEM GF PD +T
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYT 404
Query: 118 Y-----------------------------------NILLHVLGKGDKPLAALNLLNHMK 142
Y + L+H K + A++ M
Sbjct: 405 YRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMV 464
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G ++ + L+DG +R + A EM N G PD V YT MI + AG L+
Sbjct: 465 ERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLK 524
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L+D M+ +G LPNV TY ++I G C AG D+A + KE PN + Y +
Sbjct: 525 EAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFL 584
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+L G + +A + + H + KG
Sbjct: 585 DHLTRGGNMEKAVQ-LHHAMLKG 606
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 35/262 (13%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH- 123
E ++++M ++G + +TY+I++ + R G++D LD+M ++ + YN L++
Sbjct: 212 ELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLING 271
Query: 124 ----------------VLGKGDKPLA------------------ALNLLNHMKEVGFDPS 149
++ KG P A + N M G P+
Sbjct: 272 YCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPN 331
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
FT ++ GL RA + F EM + MP V Y VMI + +G + +A L D
Sbjct: 332 TYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLD 391
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M+ KG +P+ +TY +I G C G+ EA + ++ N + Y+ LV G
Sbjct: 392 EMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEG 451
Query: 270 KLAEAHEVIRHMVEKGKYIHLV 291
+ +A R MVE+G + LV
Sbjct: 452 RFKDAVSACRVMVERGVAMDLV 473
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 133/324 (41%), Gaps = 44/324 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKS--KLFNFRPFKNSYNAILHAL 55
M+ GF T+ LI C+ G V A++ V+ K KL N Y+A++H
Sbjct: 393 MVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNM-----CYSALVHGY 447
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++K + M + G A D++ Y I++ R LL EM G PD
Sbjct: 448 CKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDA 507
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY---- 171
Y ++ K A L + M + G P+V+ +T L++GL +AG +D +
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKE 567
Query: 172 ---------------FFDEMAN---------------KGCMPDVVCYTVMITSYIAAGEL 201
F D + KG + V Y ++I + G++
Sbjct: 568 TLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKI 627
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E+A L GM LP+ TY+++I C EA + M +G P+ L Y+ L
Sbjct: 628 EEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFL 687
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
V AG+L +A E+ M+ +G
Sbjct: 688 VHGCCIAGELEKAFELRDEMIRRG 711
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M DEG P+++TY ++ + G +D+ L E S +P+ TY L L
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+G A+ L +H GF + + + L+ G R G ++ M + +PD +
Sbjct: 589 RGGNMEKAVQL-HHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYI 647
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I L++A L+ M+ KG P+ Y+ ++ G C+AG+ ++A + EM
Sbjct: 648 TYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEM 707
Query: 247 ESRGCNPN 254
RG N
Sbjct: 708 IRRGMRSN 715
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 129 DKPLAALNLLNH--MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK L L+L + MK+ P V + L++GL R + FD++ + PD+
Sbjct: 73 DKVLMMLSLNDSRLMKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIY 132
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ ++ S + KA+++ M ++ YN +I G C + + EA + +
Sbjct: 133 IYSAVVRSLCELKDFNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCL 192
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G N + Y GK EA + + M EKG
Sbjct: 193 MQKGLEANVVTY---------YGKFNEAELLFKEMGEKG 222
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 63/122 (51%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + MP+V + ++ + LFD +++ P+++ Y++++R C
Sbjct: 87 MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
F++A M+ ME C + +VYN L+ L + ++ EA E+ +++KG ++V+ +
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206
Query: 296 RY 297
++
Sbjct: 207 KF 208
>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Glycine max]
Length = 836
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 121/242 (50%), Gaps = 6/242 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVY---QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
SYN ++ G ++ IE + ++M + + PD TYN +M +GK+D HRLL
Sbjct: 538 SYNTLI---FGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLL 594
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
E GF P+ +TY +LL K D+ A+ ++ + S + + L+ R
Sbjct: 595 HEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRI 654
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
GN+ D M ++G +P Y+ +I G +++A+++F+ M +G LPNVF Y
Sbjct: 655 GNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCY 714
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++I G C G+ D +++ EM S G PN + Y ++ G + EA E++ M+
Sbjct: 715 TALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIR 774
Query: 284 KG 285
G
Sbjct: 775 NG 776
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 115/224 (51%), Gaps = 1/224 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ S G P + T N+++ + + +L + + + D + G +PD T+ ++
Sbjct: 208 IFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFD-LACQGVAPDVFTFTTAINAFC 266
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
KG + A++L M+ +G P+V+ + ++DGL ++G + F D M P VV
Sbjct: 267 KGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVV 326
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+I+ + E+A ++ M + G PN +N++I G+C G EA + EM
Sbjct: 327 TYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEM 386
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+G PNF+ +NTL+ + ++ +A +V+ +++ G +++
Sbjct: 387 AMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNM 430
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 137/308 (44%), Gaps = 51/308 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G ++N LI C G++ A K+ E ++ + F+P +YN ++ L
Sbjct: 527 MLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQE---FQPDTYTYNFLMKGLAD 583
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTY---------------------------------- 83
+ + + + + + G+ P++ TY
Sbjct: 584 MGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVV 643
Query: 84 -NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLN 139
NI++ A R+G + + +L D M G P TY+ L+H +G+ D+ A +
Sbjct: 644 YNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDE---AKEIFE 700
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M+ G P+V +T L+ G + G +D EM++ G P+ + YT+MI Y G
Sbjct: 701 EMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLG 760
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP--NFLV 257
+++A++L + MI G P+ TYN++ +G+C + T+ + +S P +
Sbjct: 761 NMKEARELLNEMIRNGIAPDTVTYNALQKGYCKEREL--TVTLQSDHKSNIGLPLEEEIT 818
Query: 258 YNTLVSNL 265
YNTL+ L
Sbjct: 819 YNTLIHKL 826
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 136/318 (42%), Gaps = 41/318 (12%)
Query: 6 FPTTARTFNIL--ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
FP N++ + G A + +R ++SK+ P +Y ++ L+ + ++
Sbjct: 287 FPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKV---NPSVVTYGVLISGLMKLEMFEE 343
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V +M G+AP+ + +N ++ R G + + R+ DEM G P+F T+N LL
Sbjct: 344 ANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQ 403
Query: 124 VLGKGDKPLAALNLLNH--------------------MKEVGFDPSVLHFTTLMDGLSRA 163
+ ++ A +L + M+ GF ++ T L+ G R
Sbjct: 404 GFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRV 463
Query: 164 ----------------GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
G+ +A + +F A KG + V ++ G +E+ ++
Sbjct: 464 SDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEV 523
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
M+ KG L + +YN++I G C GK +EA + +EM + P+ YN L+ L +
Sbjct: 524 LKQMLEKGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLAD 583
Query: 268 AGKLAEAHEVIRHMVEKG 285
GK+ + H ++ E G
Sbjct: 584 MGKIDDVHRLLHEAKEYG 601
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 2/223 (0%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
IE ++ + +G A + +T N ++ G +++ +L +M G D +YN L+
Sbjct: 485 IELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIF 544
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K K A L M + F P + LM GL+ G +D E G +P
Sbjct: 545 GCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVP 604
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGM-ITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
+V Y +++ Y A +E A F + K +L +V YN +I +C G EA +
Sbjct: 605 NVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSV-VYNILIAAYCRIGNVTEAFKL 663
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+SRG P Y++L+ + G++ EA E+ M +G
Sbjct: 664 RDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEG 706
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 116/262 (44%), Gaps = 36/262 (13%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M G P+++TYN V+ ++ G+ ++ R D M RS +P TY +L+ L
Sbjct: 277 LFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLM 336
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A +L M +GF P+ + F L+DG R G++ DEMA KG P+ V
Sbjct: 337 KLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFV 396
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPN--VFTY--------------------- 223
+ ++ + + ++E+A+ + +++ G N V +Y
Sbjct: 397 TFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKL 456
Query: 224 ------------NSMIRGFCMAGKFDEACTMMKEMES-RGCNPNFLVYNTLVSNLRNAGK 270
++ G C EA + ++ + +G N + N L+ L G
Sbjct: 457 LSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGN 516
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
+ E EV++ M+EKG + +S
Sbjct: 517 MEEVFEVLKQMLEKGLLLDRIS 538
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 100/209 (47%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
+G APD+ T+ + A + G++ L +M G P+ TYN ++ L K +
Sbjct: 249 QGVAPDVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEE 308
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
AL + M +PSV+ + L+ GL + + EM + G P+ V + +I
Sbjct: 309 ALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALID 368
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y G++ +A + D M KG PN T+N++++GFC + + ++A ++ + S G +
Sbjct: 369 GYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSV 428
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
N V + ++ L A +++ ++
Sbjct: 429 NMDVCSYVIHRLMERSGFVSALKIVTKLL 457
>gi|359481811|ref|XP_002278330.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Vitis vinifera]
Length = 848
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 150/288 (52%), Gaps = 8/288 (2%)
Query: 10 ARTFNILICTCGEVGLAR---KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A T+N LI G G R +++ +++ + P +++YN +++A +K
Sbjct: 197 AETYNALINAHGRAGQWRWAMNIMDDMLRAAI---PPSRSTYNNLINACGSSGNWKEALN 253
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++M++ G PD++T+NIV+ A R + + + M + PD T NI+++ L
Sbjct: 254 VCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 127 KGDKPLAALNLLNHMKEVGFD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K + A+++ N MKE + P V+ FTT++ S G ++ C+ F+ M +G P+
Sbjct: 314 KLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPN 373
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V Y +I +Y + G ++A +F+ + G P+V +Y S++ + +GK ++A + +
Sbjct: 374 IVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFE 433
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M C PN + YN L+ + G L EA E++ M G ++VS
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVS 481
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P T T NI+I ++G K ++ F +K K P ++ I+H Q +
Sbjct: 300 PDTT-TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENC 358
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ + M EG P+I++YN ++ A G + + +E+ ++GF PD +Y LL+
Sbjct: 359 QTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNA 418
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK KP A+ + M+ P+++ + L+D G L EM G P+
Sbjct: 419 YGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPN 478
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V ++ + G+ K + + +G N YNS I + G++D+A ++ +
Sbjct: 479 IVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
M ++ P+ + YN L+S K EA + M++
Sbjct: 539 AMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMD 577
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD TYN ++ A R G+ ++D+M R+ P TYN L++ G ALN+
Sbjct: 195 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 254
Query: 138 LNHMKEVGFDPS-------------------VLHFTTLMDG----------------LSR 162
M E G P VL + LM G L +
Sbjct: 255 CKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVK 314
Query: 163 AGNLDACKYFFDEMANK--GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G F+ M K C PDVV +T +I Y G++E Q F+ M+ +G PN+
Sbjct: 315 LGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+YN++I + G EA ++ E++ G +P+ + Y +L++ +GK +A +V
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 281 M 281
M
Sbjct: 435 M 435
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 129/319 (40%), Gaps = 35/319 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G ++N LI G+ ++ F + K F P SY ++L+A +
Sbjct: 365 MLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGK 424
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V++ M P++++YN ++ A G L + +L EM R+G P+ +
Sbjct: 425 PEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT 484
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G+ + + ++L+ + G + + + + G D + M K
Sbjct: 485 LLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
PD V Y V+I+ +Y G++ +A+
Sbjct: 545 VKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAE 604
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+F M G P+V TY +MI + +A +++A + EME+ P+ + ++L+
Sbjct: 605 SMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAF 664
Query: 266 RNAGKLAEAHEVIRHMVEK 284
G+ A+ + M EK
Sbjct: 665 NKGGQPAKVLVLAEFMREK 683
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 122/320 (38%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG + L+ CG G K+ ++L + +YN+ + + L + +
Sbjct: 470 MERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGE 529
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y +Y+ M + PD +TYN+++ ++ K + LDEM Y+
Sbjct: 530 YDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSS 589
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + A ++ MK VG P V+ +T ++ A N + F EM
Sbjct: 590 VICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDD 649
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + + ++ ++ G+ K L + M K N ++ M+ + ++ E
Sbjct: 650 VQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREII 709
Query: 241 TMMKEME-----------------------------------SRGCNPNFLVYNTLVSNL 265
++K ME + G NF Y+ L+ NL
Sbjct: 710 GLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNL 769
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
AG + EV++ M E G
Sbjct: 770 LAAGNWRKYIEVLQWMEEAG 789
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 20/236 (8%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ P + ++ +IC + G + F K K+ RP +Y A++HA
Sbjct: 575 MMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAEN 634
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ ++ +M + PD + + +M A + G+ + +L E R P F+ +
Sbjct: 635 WEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV-LVLAEFMREKKIP-FNNSSF 692
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVG-----FDPSVLHFT-----TLMDGLSRAGNLDACK 170
V +A +LL +E+ +PS+ + L+ L ++G ++
Sbjct: 693 FEMV--------SACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMM 744
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F ++ G + Y++++ + +AAG K ++ M G P+V Y S+
Sbjct: 745 KLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRSI 800
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 132/247 (53%), Gaps = 8/247 (3%)
Query: 43 PFKNSYNAILHALLG----IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
P ++N +++ L +R KL++ ++ + G P+ +TYN ++ GKLD+
Sbjct: 256 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLK----GCVPNEVTYNTIINGLCLKGKLDK 311
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
LLD M S P+ TY L++ L K + + ++LL+ ++E G + ++TL+
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 371
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL + + + +M KGC P++V Y+ +I G+L++A+++ M+ KG P
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTP 431
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N FTY+S+I+GF G +A + KEM C PN + Y+ L+ L GKL EA +
Sbjct: 432 NAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMW 491
Query: 279 RHMVEKG 285
HM+ +G
Sbjct: 492 THMLGRG 498
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 137/280 (48%), Gaps = 4/280 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T R+FN ++ + GL + +E + + K N P S+N ++ A+ +
Sbjct: 150 TVRSFNSVLNVIIQEGLFHRALEFYECGVGGKT-NISPNVLSFNLVIKAMCKLGLVDRAI 208
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V+++M+ + PD+ TY +M + ++D+ LLDEM G P T+N+L++ L
Sbjct: 209 EVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGL 268
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + L+++M G P+ + + T+++GL G LD D M C+P+
Sbjct: 269 CKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPND 328
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I + G L + +G N + Y+++I G K +EA + K+
Sbjct: 329 VTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKK 388
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M +GC PN +VY+ L+ L GKL EA E++ MV KG
Sbjct: 389 MVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 140/286 (48%), Gaps = 11/286 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVER-FIKSKLFNFRPFKNSYNAILHALLG 57
IE FP++ TFN+LI C G++ K+V+ F+K + P + +YN I++ L
Sbjct: 251 IEGCFPSSV-TFNVLINGLCKKGDMVRVTKLVDNMFLKGCV----PNEVTYNTIINGLCL 305
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDEMGRSGFSPDFH 116
+ + +M P+ +TY ++ + G+ +D H LL + G + +
Sbjct: 306 KGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVH-LLSSLEERGHHANEY 364
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y+ L+ L K +K A+ L M E G P+++ ++ L+DGL R G LD K EM
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
NKGC P+ Y+ +I + G +KA ++ M +PN Y+ +I G C GK
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
EA M M RG P+ + Y++++ L NAG + ++ M+
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 99 FHRLLD-----EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
FHR L+ G++ SP+ ++N+++ + K A+ + M +P V +
Sbjct: 167 FHRALEFYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTY 226
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
TLMDGL + +D DEM +GC P V + V+I G++ + L D M
Sbjct: 227 CTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFL 286
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG +PN TYN++I G C+ GK D+A +++ M + C PN + Y TL++ L G+ +
Sbjct: 287 KGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVD 346
Query: 274 AHEVIRHMVEKGKY 287
++ + E+G +
Sbjct: 347 GVHLLSSLEERGHH 360
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 108/222 (48%), Gaps = 2/222 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ ++ L + + ++++M ++G P+I+ Y+ ++ R GKLD+ +L EM
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G +P+ TY+ L+ K A+ + M + P+ + ++ L+ GL G L
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK--GQLPNVFTYN 224
+ M +G PDVV Y+ MI AG +E LF+ M+ + P+V TYN
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 544
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
++R C A ++ M RGCNP+ + N ++ LR
Sbjct: 545 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALR 586
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G A T++ LI + G ++K + + + N P + Y+ ++H L +
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 483
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFHTY 118
+ ++ M G PD++ Y+ ++ G ++ +L +EM S PD TY
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA-CKYFFDEMA 177
NILL L K + A++LLN M + G +P ++ ++ L N + F DE
Sbjct: 544 NILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDE-- 601
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
++ + A + + M+ K PN T+ +I C K
Sbjct: 602 -------------LVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKK 646
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 17/305 (5%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFI--KSKLFNFRPFKNSYNAILHALLGIRQ 60
E+G + ++ CG+ G + RF SK +R Y A++ L +RQ
Sbjct: 114 ESGVAVRSGLTERVLNRCGDAG---NLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQ 170
Query: 61 YKLIEWVYQQMSDEG---YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M E +P + + A R+ K + +LDEM + G PD H
Sbjct: 171 FGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVK--KAIEVLDEMPKYGCEPDEHV 228
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ LL L K A +L M+ + F P++ HFT+L+ G R G L KY ++
Sbjct: 229 FGCLLDALCKNGSVKEAASLFEDMR-IRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIR 287
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD+V Y ++T Y AAG++ A DL M K PNV ++ ++I+ C K +
Sbjct: 288 EAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKME 347
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
EA + EM+S GC + + Y TL+S GK+++ +E++ +M+++G Y+H++
Sbjct: 348 EAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIM 407
Query: 292 SKFKR 296
+ ++
Sbjct: 408 AAHEK 412
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN + F +L+ + +K +E + + P ++ + +L AL K
Sbjct: 184 ENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVK 243
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+++ M + P + + ++ R GKL + +L ++ +GF PD YN LL
Sbjct: 244 EAASLFEDMRIR-FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLL 302
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + A +LL M+ +P+V+ FTTL+ L ++ F EM + GC
Sbjct: 303 TGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCP 362
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
D V YT +I+ + G++ K +L D MI +G +PN TY ++ + +E +
Sbjct: 363 ADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIEL 422
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
M+EM GC P+ +YN ++ R A KL E E +R
Sbjct: 423 MEEMRKIGCTPDLNIYNIVI---RLACKLGEIKEGVR 456
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 4/249 (1%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
F P + ++L+ R+ KL+E +V Q+ + G+ PDI+ YN ++ GK+
Sbjct: 254 IRFTPTLKHFTSLLYGW--CREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKM 311
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+ LL EM R P+ ++ L+ L K A+ + M+ G + +TTL
Sbjct: 312 VDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTL 371
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ G + G + D M +G +P+ + Y ++ ++ ELE+ +L + M G
Sbjct: 372 ISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGC 431
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ YN +IR C G+ E + EME+ G +P + ++ + L EA E
Sbjct: 432 TPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACE 491
Query: 277 VIRHMVEKG 285
+ MV +G
Sbjct: 492 FFKEMVGRG 500
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 12/235 (5%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M +G+ P+ +TY +M A + +L++ L++EM + G +PD + YNI++ + K +
Sbjct: 391 MIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGE 450
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDG-LSRAGNLDACKYFFDEMANKGCM--PDVVC 187
+ + N M+ G P + F ++ G LS+ ++AC+ FF EM +G + P
Sbjct: 451 IKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACE-FFKEMVGRGLLSAPQYGT 509
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
++ S + A +LE ++D++ ++TKG NV+ + I G EAC+ +M
Sbjct: 510 LKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMM 569
Query: 248 SRGCNPNFLVYNTLVSNLR---NAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
G P + L+ LR N AE E +R M + + FK YKR
Sbjct: 570 DAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRKMAAEREMT-----FKMYKR 619
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 129/262 (49%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
G R+ E F + P + +Y A+++ I Q + E + M G + + +
Sbjct: 267 GNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVF 326
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
N ++ R G +++ + M + G D +TYN L L + ++ A LL+ M E
Sbjct: 327 NTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAE 386
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P+ + +TTL+ ++ G++ + F +M KG P VV Y VMI YI G + +
Sbjct: 387 KGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIRE 446
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+ M KG +P+++TY ++ G C+ GK D A + +EM+ RG PN + Y LVS
Sbjct: 447 AERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVS 506
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M+ G
Sbjct: 507 GLAKEGRSEEAFQLYDDMLAAG 528
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 111/204 (54%), Gaps = 1/204 (0%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L+ ++V+ + G +D H LLDE+ R G + YN LL + A LL
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G +P+V +T L+DGLSRAG++ + +DEM K DV Y+ +I +Y G
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A ++FD + G PN TY ++I GFC G+ + A ++ +M+ RG N +V+NT
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEK 284
++ G + +A E I+ ++EK
Sbjct: 329 MIDGYCRHGMVEKALE-IKAVMEK 351
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 14/271 (5%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVE----RFIKSKLFNFRPFKNSYNAILHA 54
+ +G RT+ LI C G++ A ++ R + F + Y H
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY--CRHG 337
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + + I+ V ++M G DI TYN + C R+ +++ +LL M G +P+
Sbjct: 338 M--VEKALEIKAVMEKM---GIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPN 392
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+ +Y L+ + K + A L M+ G PSV+ + ++DG + G++ + F
Sbjct: 393 YVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKK 452
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM KG +PD+ Y ++ + G+++ A LF+ M +G PNV Y +++ G G
Sbjct: 453 EMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEG 512
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ +EA + +M + G P+ +Y+ LV +L
Sbjct: 513 RSEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 117/245 (47%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN++L + R + + ++M + G P + TY I++ R G + + + DEM
Sbjct: 186 YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMK 245
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
R + D + Y+ +++ +G A + + G +P+ + L++G + G ++
Sbjct: 246 RKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIE 305
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + +M +G + + + MI Y G +EKA ++ M G +++TYN++
Sbjct: 306 AAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLA 365
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
G C + ++A ++ M +G PN++ Y TL+S G + EA + R M KG
Sbjct: 366 CGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSR 425
Query: 288 IHLVS 292
+V+
Sbjct: 426 PSVVT 430
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 104/243 (42%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y ++ L +E VY +M + A D+ Y+ V+ A R G + + +
Sbjct: 216 PTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEV 275
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
DE G P+ TY L++ K + AA LL M+ G + + F T++DG R
Sbjct: 276 FDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCR 335
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G ++ M G D+ Y + +E A+ L M KG PN +
Sbjct: 336 HGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVS 395
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I G EA + ++ME +G P+ + YN ++ G + EA + M
Sbjct: 396 YTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455
Query: 283 EKG 285
+KG
Sbjct: 456 KKG 458
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
N +P SY+ I+ L + ++++M G PD+++Y ++ R GK
Sbjct: 477 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 536
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L +EM G PD T+++L+ +L K K + A LL M + G P+ + +TTL+
Sbjct: 537 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 596
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT-KGQL 217
GL + F +M GC+PDVV Y ++ G ++ A +L M++ GQ
Sbjct: 597 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 656
Query: 218 -----PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
P+V +Y+ +I G C G+ DEA + KEM++ G PN + Y +L+ +GKL
Sbjct: 657 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 716
Query: 273 EAHEVIRHMVEKGKYIHLVS 292
+A + MV++G ++ V+
Sbjct: 717 DAKHLFNEMVDQGVQLNAVT 736
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 12/274 (4%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A +++I+I C CG AR E F + K P SY +++H ++K ++
Sbjct: 483 AISYSIIIDGLCKCGREDEAR---ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M D G PD+ T+++++ + GK+ + + LL+ M + G P+ TY L+ L
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC----KYFFDEMANKGC- 181
D+ A L M+++G P V+ + TLM GL + GN+ K + G
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659
Query: 182 -MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y+++I G ++A++LF M G +PNV +Y S+I GFC +GK ++A
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ EM +G N + Y+ ++ G++ +A
Sbjct: 720 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 147/297 (49%), Gaps = 13/297 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T ++LI C G+V A K++E I+ P + ++ L
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI---PDVVTCTTLVKGLCM 419
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHR-LLDEMGRSGFS- 112
+ ++ +M G P+++T +M + G + + H+ +L + G +
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479
Query: 113 -PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
P+ +Y+I++ L K + A L MK +G P V+ +T+L+ G R+G KY
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F+EM + G PDV ++V+I G++ +A +L + MI +G +PN TY ++++G C
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV-EKGKY 287
M + EA + +M+ GC P+ + Y TL+ L G + A E+ + M+ + G+Y
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 656
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 144/292 (49%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALL 56
M++ G + T ++LI C G+V A +++E I+ + + +Y+ ++ L
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV----TYSTLIKGLC 237
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHR-LLDEMGRSGFS 112
+ ++ M G PD + Y +M + G ++ Q H+ +L++ GR G
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIK 297
Query: 113 --PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
P +Y+I++ L K + A L MK G P V+ +TTL+ G +G + K
Sbjct: 298 CKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAK 357
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F+EM + G PDV +V+I G++ +A L + +I +G +P+V T ++++G
Sbjct: 358 CLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
CM + +A + +M+ GC PN + TL+ L +G + A E+ ++M+
Sbjct: 418 CMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 469
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 6/224 (2%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G PD+ T +++ + GK+ + + LL+ M + G D TY+ L+ L + A
Sbjct: 5 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------CMPDVVCY 188
L MK++G P + + TLM GL + G ++ + EM N C P +V Y
Sbjct: 65 TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I ++A++LF M +G +P+V +Y S+I GFC +GK+++A + EM
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G + + L+ L GK+ EA+E++ M+++G + +V+
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVT 228
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 124/248 (50%), Gaps = 7/248 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHR-L 102
+Y+ ++ L + ++ M G PD + Y +M + GK++ H+ +
Sbjct: 47 TYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEM 106
Query: 103 LDEMGRSGFS--PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L++ + G P +Y+I++ L K + A L MK G P V+ +T+L+ G
Sbjct: 107 LNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGF 166
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R+G + K F+EM + G DV +++I G++ +A +L + MI +G + ++
Sbjct: 167 CRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDI 226
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY+++I+G CM + EA + M+ GC P+ + Y TL+ L G + A ++ +
Sbjct: 227 VTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286
Query: 281 MV-EKGKY 287
M+ + G+Y
Sbjct: 287 MLNDTGRY 294
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 133/307 (43%), Gaps = 18/307 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T++ LI C + A ++ F+ + RP +Y ++ L
Sbjct: 217 MIQRGCILDIVTYSTLIKGLCMKHRISEATRL---FMSMQKLGCRPDAIAYGTLMKGLCQ 273
Query: 58 IRQYKLIEWVYQQM-SDEGY-----APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
++Q+M +D G P +++Y+I++ + + D+ L EM G
Sbjct: 274 TGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGI 333
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD +Y L+H K A L N M +VG P V + L+D L + G +
Sbjct: 334 MPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANK 393
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+ + +GC+PDVV T ++ + KA LF M G +PNV T ++++G C
Sbjct: 394 LLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLC 453
Query: 232 MAGKFDEACTMMKEMESR------GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G A + K M S C PN + Y+ ++ L G+ EA E+ + M G
Sbjct: 454 QSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALG 513
Query: 286 KYIHLVS 292
++S
Sbjct: 514 VIPDVIS 520
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 138/313 (44%), Gaps = 44/313 (14%)
Query: 17 ICTCGEVGLARKVVERFIKSKL---FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
+C G++ +A + + + +P SY+ I+ L R+ ++++M
Sbjct: 90 LCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEMKA 149
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
+G PD+++Y ++ R GK ++ L +EM G D T ++L+ +L K K +
Sbjct: 150 QGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIE 209
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A LL M + G ++ ++TL+ GL + F M GC PD + Y ++
Sbjct: 210 ANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMK 269
Query: 194 SYIAAGEL-----------------------------------------EKAQDLFDGMI 212
G + ++A++LF M
Sbjct: 270 GLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMK 329
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G +P+V +Y ++I GFC++GK+++A + EM G P+ + L+ L GK+
Sbjct: 330 AQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVI 389
Query: 273 EAHEVIRHMVEKG 285
EA++++ ++++G
Sbjct: 390 EANKLLEVVIQRG 402
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 122/238 (51%), Gaps = 14/238 (5%)
Query: 59 RQYKLIEW--VYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSP 113
++ K+IE + + M G DI+TY+ + +C K+R+ + Q L M + G P
Sbjct: 22 KEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQ---LFMSMKKLGCRP 78
Query: 114 DFHTYNILLHVLGKGDKPLAALNL----LNHMKEVGF--DPSVLHFTTLMDGLSRAGNLD 167
D Y L+ L + K AL+L LN + G P+++ ++ ++DGL + D
Sbjct: 79 DAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRRED 138
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ F EM +G MPDV+ YT +I + +G+ EKA+ LF+ M+ G +V T + +I
Sbjct: 139 EARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLI 198
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C GK EA +++ M RGC + + Y+TL+ L +++EA + M + G
Sbjct: 199 DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLG 256
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 6/158 (3%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M VG P V L+D + G + + M +GC+ D+V Y+ +I
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG------CNPN 254
+ +A LF M G P+ Y ++++G C GK + A + +EM + C P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ Y+ ++ L + EA E+ + M +G ++S
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVIS 158
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ L+ C GE A K + R I+ YN I+ L
Sbjct: 148 VVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFL-RMIEDSSTGLNVV--MYNTIIDGLCK 204
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Y +M+ G P+++TY ++ G+L LL+EM +P+ +T
Sbjct: 205 DKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYT 264
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ L K K A NLL M G V+ +T+L+DG + NLD F +M
Sbjct: 265 YAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMK 324
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+ YT +I G L+ AQ LF ++ KG +V TYN MI G C G D
Sbjct: 325 EWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLD 384
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +ME GC PN + + ++ +L + +A +++ M+ KG
Sbjct: 385 EALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKG 432
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 124/276 (44%), Gaps = 3/276 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GEV +K V K F+ + SY +L+ L I + + + + D
Sbjct: 132 LCLKGEV---QKSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSST 188
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+++ YN ++ + +++ + EM G P+ TY L+ + A +
Sbjct: 189 GLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFS 248
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LLN M +P+V + L+D L + G + K EM +G DVV YT ++ +
Sbjct: 249 LLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFC 308
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
L+KA LF M G PN +TY ++I G C G+ +A + +++ +GC +
Sbjct: 309 KNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVC 368
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
YN ++ L G L EA + M + G ++V+
Sbjct: 369 TYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVT 404
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
+ +F L + P + IL L ++ Y + +QM +G P+++T NI++
Sbjct: 37 ISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINC 96
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
LG++ +L ++ + G+ P+ T L+ L + +++ + + GF +
Sbjct: 97 FCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMN 156
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + TL++GL + G F + + +VV Y +I + +A D +
Sbjct: 157 QVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYS 216
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M +G PNV TY ++I GFC+AG+ A +++ EM + NPN Y L+ L G
Sbjct: 217 EMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEG 276
Query: 270 KLAEAHEVIRHMVEKGKYIHLVS 292
K+ EA ++ M +G+ +V+
Sbjct: 277 KVKEAKNLLAEMHYRGQPADVVT 299
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 104/214 (48%), Gaps = 6/214 (2%)
Query: 75 GYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
GY P+ +T +M C K + K FH D++ GF + +Y LL+ L K +
Sbjct: 117 GYQPNTITLTTLMKGLCLKGEVQKSVHFH---DKVVAQGFQMNQVSYGTLLNGLCKIGET 173
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ L +++ +V+ + T++DGL + ++ F+ EM +G P+V+ YT +
Sbjct: 174 RCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTL 233
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + AG+L A L + MI K PNV+TY +I C GK EA ++ EM RG
Sbjct: 234 IGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQ 293
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + Y +L+ L +A + M E G
Sbjct: 294 PADVVTYTSLLDGFCKNQNLDKATALFMKMKEWG 327
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 7/215 (3%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP T+ LI C G++ A ++ I L N P +Y ++ AL + K
Sbjct: 224 FPNVI-TYTTLIGGFCLAGQLTGAFSLLNEMI---LKNINPNVYTYAILIDALCKEGKVK 279
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + +M G D++TY ++ + LD+ L +M G P+ +TY L+
Sbjct: 280 EAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALI 339
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L KG + A L + G V + ++ GL + G LD +M + GC+
Sbjct: 340 DGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCI 399
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
P+VV + ++I S E +KA+ L MI KG L
Sbjct: 400 PNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/158 (18%), Positives = 75/158 (47%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++ N M + P ++ F ++ L++ + +M KG P++V ++I
Sbjct: 36 AISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILIN 95
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+ G++ + + ++ G PN T ++++G C+ G+ ++ ++ ++G
Sbjct: 96 CFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQM 155
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
N + Y TL++ L G+ A + +R + + +++V
Sbjct: 156 NQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVV 193
>gi|299471515|emb|CBN80001.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 687
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 141/301 (46%), Gaps = 2/301 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIR 59
+IE GFP + RT+N +I C + G + ++ + L N P SY++++ A R
Sbjct: 243 VIEQGFPPSTRTYNPVIDACAKGGRWLEAMD-LLGQMLTNDIPADVISYSSVIAACGRGR 301
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++K + +QM +G +P++++YN + A + + + LL EM G P +YN
Sbjct: 302 RWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYN 361
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+ + AL LL M G P+ + + + +D ++ G + M+
Sbjct: 362 SATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTV 421
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD++ + I + + E A +L M T G PNV TYNS I + ++ EA
Sbjct: 422 GSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEA 481
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
+ +EM +RG +PN + YN+++ + A +++ M +G ++S +
Sbjct: 482 MGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEA 541
Query: 300 C 300
C
Sbjct: 542 C 542
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 133/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ N P +++ +I CG ++ ++ + + P SYN+ + A +
Sbjct: 278 MLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDR 337
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + ++M+ G P +++YN A G+ + LL EM G +P+ +YN
Sbjct: 338 WKEALDLLREMTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNS 397
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L KG + A+ LL M VG DP ++ F + +D R + EM G
Sbjct: 398 ALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAG 457
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V+ Y I + + ++A LF M T+G PNV TYNSMI +++ A
Sbjct: 458 LTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAV 517
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ M +RG P+ + YN+ + + A ++++ M +G ++S
Sbjct: 518 QLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIIS 569
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 136/293 (46%), Gaps = 2/293 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA-LLGIR 59
M G ++N I C + ++ ++ + P SYN+ A + R
Sbjct: 313 MRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGR 372
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +E + ++M +G AP+ ++YN + A + G+ ++ +LL M G PD ++N
Sbjct: 373 WVEALE-LLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFN 431
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+ G+G + A+ LL M G P+V+ + + ++ R+ F EM +
Sbjct: 432 SAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTR 491
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+VV Y MI + + E A L GM +G P+V +YNS I +++ A
Sbjct: 492 GLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELA 551
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++K M +RG P+ + YN+ V+ +G+ EA +++ M G + VS
Sbjct: 552 LQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVS 604
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 6/302 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G ++N + C + G K V+ P S+N+ + A +Q
Sbjct: 383 MPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQ 442
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + ++M G P+++TYN + A R + + L EM G SP+ TYN
Sbjct: 443 WETAVELLREMPTAGLTPNVITYNSAIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNS 502
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ KG++ A+ LL M G P V+ + + ++ + + M +G
Sbjct: 503 MIDACAKGEQWELAVQLLTGMPARGVAPDVISYNSAIEACGKGEQWELALQLLKGMPTRG 562
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD++ Y +T+ +G +A L M T G PN +Y + I ++D A
Sbjct: 563 PKPDIISYNSAVTACAKSGRWREALGLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAV 622
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
++KEM++ G PN + Y+ + G+ EA +++ + +G Y+ ++S F
Sbjct: 623 RILKEMQTHGATPNLITYSAAIDACAKQGRWKEAVDLLTDLRRQGLTPDAQTYLTVISAF 682
Query: 295 KR 296
+R
Sbjct: 683 QR 684
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 138/296 (46%), Gaps = 6/296 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK--SKLFNFRPFKNSYNAILHALLGI 58
M G T+N I C + G ++ ++ + + P +YN+ + A
Sbjct: 136 MPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNG 195
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYN--IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
++K + +QM +G P+++TYN I CAK R + ++ LL+E+ GF P
Sbjct: 196 GRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGR--RWEEAMDLLEEVIEQGFPPSTR 253
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN ++ KG + L A++LL M V+ +++++ R ++M
Sbjct: 254 TYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRWKEAMDLLEQM 313
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G P+V+ Y I + ++A DL M T G +P V +YNS + G++
Sbjct: 314 RTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSATAACAVNGRW 373
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EA ++KEM ++G PN + YN+ + G+ +A +++R M G ++S
Sbjct: 374 VEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGSDPDIIS 429
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 128/292 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T ++N C G + +E + P SYN+ L A Q
Sbjct: 348 MTTVGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQ 407
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + MS G PDI+++N + A R + + LL EM +G +P+ TYN
Sbjct: 408 WEKAVKLLRGMSTVGSDPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNS 467
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ G+ + A+ L M G P+V+ + +++D ++ + M +G
Sbjct: 468 AIEACGRSARWQEAMGLFREMPTRGLSPNVVTYNSMIDACAKGEQWELAVQLLTGMPARG 527
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y I + + E A L GM T+G P++ +YNS + +G++ EA
Sbjct: 528 VAPDVISYNSAIEACGKGEQWELALQLLKGMPTRGPKPDIISYNSAVTACAKSGRWREAL 587
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++K+M + G PN + Y + + A +++ M G +L++
Sbjct: 588 GLLKDMATVGLTPNTVSYGAAIHACGKGEQWDVAVRILKEMQTHGATPNLIT 639
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 120/284 (42%), Gaps = 37/284 (13%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN--IVMCAK------------- 90
SYN + A RQ+ + ++M EG PD++TYN I C+K
Sbjct: 111 TSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSKGGRWKEAMDLLTQ 170
Query: 91 ----------------------YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
G+ + LL++M G P+ TYN + KG
Sbjct: 171 MVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKG 230
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A++LL + E GF PS + ++D ++ G +M DV+ Y
Sbjct: 231 RRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISY 290
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I + ++A DL + M T+G PNV +YNS I ++ EA +++EM +
Sbjct: 291 SSVIAACGRGRRWKEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTT 350
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G P + YN+ + G+ EA E+++ M +G + +S
Sbjct: 351 VGLVPTVISYNSATAACAVNGRWVEALELLKEMPAQGIAPNTIS 394
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 132/289 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N I C G ++ ++ + P +YN+ + A R+++ + +++
Sbjct: 184 TYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNLITYNSAIGACAKGRRWEEAMDLLEEV 243
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++G+ P TYN V+ A + G+ + LL +M + D +Y+ ++ G+G +
Sbjct: 244 IEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLGQMLTNDIPADVISYSSVIAACGRGRRW 303
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A++LL M+ G P+V+ + + +D ++ EM G +P V+ Y
Sbjct: 304 KEAMDLLEQMRTQGVSPNVISYNSAIDACAKGDRWKEALDLLREMTTVGLVPTVISYNSA 363
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ G +A +L M +G PN +YNS + G++++A +++ M + G
Sbjct: 364 TAACAVNGRWVEALELLKEMPAQGIAPNTISYNSALDACAKGGQWEKAVKLLRGMSTVGS 423
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+P+ + +N+ + + A E++R M G ++++ + C
Sbjct: 424 DPDIISFNSAIDACGRGQQWETAVELLREMPTAGLTPNVITYNSAIEAC 472
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LDE SG S D +YNI + G + A+ LL M G P V+ + + + S+
Sbjct: 98 LDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSK 157
Query: 163 AGNLDACKYFFDEMA--NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G +M +G PDVV Y I + G ++A DL + M+ +G PN+
Sbjct: 158 GGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNL 217
Query: 221 FTYNSMIRGFCMAG-KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYNS I G C G +++EA +++E+ +G P+ YN ++ G+ EA +++
Sbjct: 218 ITYNSAI-GACAKGRRWEEAMDLLEEVIEQGFPPSTRTYNPVIDACAKGGRWLEAMDLLG 276
Query: 280 HMV 282
M+
Sbjct: 277 QML 279
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
DE G D Y + I + + A L M T+G P+V TYNS I
Sbjct: 98 LDEFKISGGSLDTTSYNIAIAACSNGRQWATAVRLLREMPTEGVTPDVVTYNSAIAACSK 157
Query: 233 AGKFDEACTMMKEM--ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
G++ EA ++ +M + G P+ + YN+ ++ N G+ EA +++ MV +G +L
Sbjct: 158 GGRWKEAMDLLTQMVAPTEGITPDVVTYNSAIAACSNGGRWKEAMDLLEQMVAQGVPPNL 217
Query: 291 VS 292
++
Sbjct: 218 IT 219
>gi|297739653|emb|CBI29835.3| unnamed protein product [Vitis vinifera]
Length = 852
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 150/288 (52%), Gaps = 8/288 (2%)
Query: 10 ARTFNILICTCGEVGLAR---KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A T+N LI G G R +++ +++ + P +++YN +++A +K
Sbjct: 197 AETYNALINAHGRAGQWRWAMNIMDDMLRAAI---PPSRSTYNNLINACGSSGNWKEALN 253
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V ++M++ G PD++T+NIV+ A R + + + M + PD T NI+++ L
Sbjct: 254 VCKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLV 313
Query: 127 KGDKPLAALNLLNHMKEVGFD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K + A+++ N MKE + P V+ FTT++ S G ++ C+ F+ M +G P+
Sbjct: 314 KLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPN 373
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V Y +I +Y + G ++A +F+ + G P+V +Y S++ + +GK ++A + +
Sbjct: 374 IVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFE 433
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M C PN + YN L+ + G L EA E++ M G ++VS
Sbjct: 434 LMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVS 481
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 126/279 (45%), Gaps = 3/279 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P T T NI+I ++G K ++ F +K K P ++ I+H Q +
Sbjct: 300 PDTT-TLNIVIYCLVKLGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENC 358
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ + M EG P+I++YN ++ A G + + +E+ ++GF PD +Y LL+
Sbjct: 359 QTAFNTMLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNA 418
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK KP A+ + M+ P+++ + L+D G L EM G P+
Sbjct: 419 YGKSGKPEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPN 478
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V ++ + G+ K + + +G N YNS I + G++D+A ++ +
Sbjct: 479 IVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYR 538
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
M ++ P+ + YN L+S K EA + M++
Sbjct: 539 AMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMD 577
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 37/241 (15%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD TYN ++ A R G+ ++D+M R+ P TYN L++ G ALN+
Sbjct: 195 PDAETYNALINAHGRAGQWRWAMNIMDDMLRAAIPPSRSTYNNLINACGSSGNWKEALNV 254
Query: 138 LNHMKEVGFDPS-------------------VLHFTTLMDG----------------LSR 162
M E G P VL + LM G L +
Sbjct: 255 CKKMTENGVGPDLVTHNIVLSAYKRGNQYSKVLSYFELMKGTNIRPDTTTLNIVIYCLVK 314
Query: 163 AGNLDACKYFFDEMANK--GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G F+ M K C PDVV +T +I Y G++E Q F+ M+ +G PN+
Sbjct: 315 LGQNGKAIDIFNSMKEKRSECYPDVVTFTTIIHLYSVCGQIENCQTAFNTMLAEGLKPNI 374
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+YN++I + G EA ++ E++ G +P+ + Y +L++ +GK +A +V
Sbjct: 375 VSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGKPEKAMKVFEL 434
Query: 281 M 281
M
Sbjct: 435 M 435
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 129/319 (40%), Gaps = 35/319 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G ++N LI G+ ++ F + K F P SY ++L+A +
Sbjct: 365 MLAEGLKPNIVSYNALIGAYASHGMDKEAFSVFNEIKKNGFHPDVVSYTSLLNAYGKSGK 424
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V++ M P++++YN ++ A G L + +L EM R+G P+ +
Sbjct: 425 PEKAMKVFELMRRNHCKPNLVSYNALIDAYGSKGLLTEAVEILHEMERNGVQPNIVSICT 484
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G+ + + ++L+ + G + + + + G D + M K
Sbjct: 485 LLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGEYDKALSLYRAMRTKK 544
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
PD V Y V+I+ +Y G++ +A+
Sbjct: 545 VKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSSVICAYSKQGQVTEAE 604
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+F M G P+V TY +MI + +A +++A + EME+ P+ + ++L+
Sbjct: 605 SMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDDVQPDSIACSSLMRAF 664
Query: 266 RNAGKLAEAHEVIRHMVEK 284
G+ A+ + M EK
Sbjct: 665 NKGGQPAKVLVLAEFMREK 683
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 122/320 (38%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M NG + L+ CG G K+ ++L + +YN+ + + L + +
Sbjct: 470 MERNGVQPNIVSICTLLAACGRCGQKVKIKSVLSAAELRGIKLNTTAYNSAIGSYLSVGE 529
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y +Y+ M + PD +TYN+++ ++ K + LDEM Y+
Sbjct: 530 YDKALSLYRAMRTKKVKPDPVTYNVLISGCCKMSKYGEALGFLDEMMDLKIPLSKEVYSS 589
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + A ++ MK VG P V+ +T ++ A N + F EM
Sbjct: 590 VICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAENWEKASALFLEMETDD 649
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + + ++ ++ G+ K L + M K N ++ M+ + ++ E
Sbjct: 650 VQPDSIACSSLMRAFNKGGQPAKVLVLAEFMREKKIPFNNSSFFEMVSACSLLREWREII 709
Query: 241 TMMKEME-----------------------------------SRGCNPNFLVYNTLVSNL 265
++K ME + G NF Y+ L+ NL
Sbjct: 710 GLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMMKLFYKIVASGAEINFYTYSILLKNL 769
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
AG + EV++ M E G
Sbjct: 770 LAAGNWRKYIEVLQWMEEAG 789
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 115/278 (41%), Gaps = 27/278 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ P + ++ +IC + G + F K K+ RP +Y A++HA
Sbjct: 575 MMDLKIPLSKEVYSSVICAYSKQGQVTEAESMFTKMKMVGCRPDVITYTAMIHAYDVAEN 634
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ ++ +M + PD + + +M A + G+ + +L E R P F+ +
Sbjct: 635 WEKASALFLEMETDDVQPDSIACSSLMRAFNKGGQPAKV-LVLAEFMREKKIP-FNNSSF 692
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVG-----FDPSVLHFT-----TLMDGLSRAGNLDACK 170
V +A +LL +E+ +PS+ + L+ L ++G ++
Sbjct: 693 FEMV--------SACSLLREWREIIGLIKLMEPSISVVSIGLLNQLLHFLGKSGKIETMM 744
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F ++ G + Y++++ + +AAG K ++ M G P+V Y S I F
Sbjct: 745 KLFYKIVASGAEINFYTYSILLKNLLAAGNWRKYIEVLQWMEEAGLQPSVGMYRS-ISSF 803
Query: 231 CMAGKFDEACTMMKE------MESRGCNPNFLVYNTLV 262
E +++E SR NP + ++L+
Sbjct: 804 AQNRSGAEYAAVIQERIESLKRNSRNQNPTKKLNDSLL 841
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 119/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 141 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 200
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 201 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 260
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ M ++ +PD++ Y +I G+L++A L D M KG P+ TY ++I
Sbjct: 261 LAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLI 320
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 321 DGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 378
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 129 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 185
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 186 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 245
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 246 FTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 305
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 306 MKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSV 365
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G PN Y +++ G + + ++++ M G +V+
Sbjct: 366 DAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 420
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 6/275 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E R +E + ++ F ++ +L L+ ++ +KL+ Y+ +
Sbjct: 71 FSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKXIL 130
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGD 129
+ GY + +NI+M + G + + D + + G P +YN L++ LG D
Sbjct: 131 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 190
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ L + M G P V ++ L++GL + +D FDEM KG +P+ V +T
Sbjct: 191 E---GFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFT 247
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + G ++ A +++ M+++ LP++ TYN++I G C G +A ++ EM +
Sbjct: 248 TLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 307
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + Y TL+ G L A E + M+++
Sbjct: 308 GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQE 342
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 75/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M + PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 265 IYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCC 324
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G P+
Sbjct: 325 KEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXR 384
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 385 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +GF T++IL G ++ ++ F K + + +L+ L +
Sbjct: 164 MVPDGF-----TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 218
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E V Q + + G P + YN ++ + G+L+ +M PD TYN
Sbjct: 219 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 278
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K ++ A +LL M++ G +P+V F TL+D R G L+ C EM G
Sbjct: 279 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 338
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ ++ G++ +A + D M K LPN YN++I + G D+A
Sbjct: 339 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 398
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++++M+S G +P+ + YN L+ L N +++EA E+I +
Sbjct: 399 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 439
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P A ++N++I G VE F + P +YN ++ + +
Sbjct: 60 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 119
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ QM G P+ +TYN+++ R G++ + LLDEM PD TY+IL L
Sbjct: 120 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A L+L + G + L++GL + G + + + N G +P V
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y GELE A F M ++ P+ TYN++I G C A + A ++ EM
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G NP +NTL+ G+L + V+ M E G ++VS
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 345
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 140/287 (48%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++NG T +IL+ C G+V +A +V++ + + L P + YN +++
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV---PTRVIYNTLINGYCQT 251
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + QM PD +TYN ++ + ++ LL EM +G +P T+
Sbjct: 252 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G+ + +L+ M+E G P+V+ + ++++ + G + D+M +
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 371
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +P+ Y +I +Y+ G ++A L + M + G P++ TYN +I+G C + E
Sbjct: 372 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 431
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ + + P+ + YNTL+S G + +A ++ + M + G
Sbjct: 432 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G T +N LI + G F + K + +P +YNA+++ L +
Sbjct: 229 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 288
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D G P + T+N ++ A R G+L++ +L EM +G P+ +Y
Sbjct: 289 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 348
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K K A+ +L+ M P+ + ++D G D ++M + G
Sbjct: 349 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 408
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P +V Y ++I ++ +A+++ + + +P+ +YN++I C G D+A
Sbjct: 409 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 468
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ + M G Y+ L+S L AG+L E + + M++
Sbjct: 469 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQ 511
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 110/233 (47%), Gaps = 1/233 (0%)
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-S 112
ALL + ++ + + ++ G PD +N + A G L + +L MGR G
Sbjct: 1 ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ +YN+++ + + + A+ + + M E P+ + + T++DG + G+L+A
Sbjct: 61 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
D+M G P+ + Y V+++ AG + + L D M ++ +P+ FTY+ + G
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G ++ + G + L++ L GK++ A EV++ +V G
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 233
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 74/205 (36%), Gaps = 35/205 (17%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A+ +N +I E G + K K P +YN ++ L Q E +
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 437
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+S+ PD ++YN ++ A G +D+ L M + G TY+
Sbjct: 438 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH---------- 487
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
L+ GL AG L+ +Y + +M +P +
Sbjct: 488 -------------------------QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHN 522
Query: 190 VMITSYIAAGELEKAQDLFDGMITK 214
+M+ +Y G KA+DL M+ K
Sbjct: 523 IMVEAYSKYGNEIKAEDLRKEMLQK 547
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 6/275 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L+ C+ V AR++ R +K L P +YN ++ + ++
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGL---EPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+++ ++ P I +YN ++ G++ +LLDEM S PD TYNIL+ L K
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ L AL +L M + G P+++ + +MDG N++ K F+ M G PD++ Y
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+I Y +++A LF M K +P++ +YNS+I G C G+ ++ EM
Sbjct: 479 NVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
G +P+ + YN L+ +A + R +VE
Sbjct: 539 SGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 137/325 (42%), Gaps = 35/325 (10%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G A T+N LI C VG ++V + K N P ++N ++ AL +
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V MS G PDI+TYN +M + + L + M + G PD YN+L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K A+ L + P++ + +L+DGL +G + K DEM
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK------- 235
PDVV Y ++I + G + +A + M+ KG PN+ TYN+M+ G+C+
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 236 ----------------------------FDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
DEA + KEM + P+ YN+L+ L N
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ E++ M + G+ +++
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVIT 547
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+ + G D +TYN ++ +G+ + +LL +M R PD +T+NIL+ L K
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ L A +L M + G P ++ + LM+G N+ + F+ M +G PDV+ Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+I Y +++A LF + K +P + +YNS+I G C +G+ ++ EM
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + YN L+ L G++ EA V+ M++KG ++V+
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 34/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +N+LI + + + + F + N P SYN+++ L +
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M PD++TYNI++ A + G++ + +L M + G P+ TYN
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + A ++ N M + G +P +L++ L++G + +D F EM +K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD+ Y +I G + Q+L D M GQ P+V TYN ++ FC FD+A
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565
Query: 241 TM----------------------------------MKEMESRGCNPNFLVYNTLVSNLR 266
++ +K + GC+PN Y L++ L
Sbjct: 566 SLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 267 NAGKLAEAHEVIRHMVEKGK 286
G EA ++ M + +
Sbjct: 626 KDGSFGEAMLLLSKMEDNDR 645
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 119/250 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + ++ +L A++ + Y ++ Q+ +G +P I T+ I++ + L
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L + +SG+ P+ T+N +++ AL+ ++ G+ + TL++GLS+
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + A + EM P++V Y+ +I G + A L + +G L + T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I G C G++ E ++ +M +P+ +N L+ L G++ EA V+ M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 283 EKGKYIHLVS 292
++G+ +V+
Sbjct: 293 KRGEKPDIVT 302
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 45/322 (13%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+N PT A ++N LI C G + +K+++ S P +YN ++ AL +
Sbjct: 364 KNLVPTIA-SYNSLIDGLCNSGRISHVKKLLDEMHGSAQ---PPDVVTYNILIDAL--CK 417
Query: 60 QYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++E V M +G P+I+TYN +M ++ + + M +SG PD
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L++ K + A+ L M+ P + + +L+DGL G + + DEM
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 178 NKGCMPDVVCYTVMITSY---------------------------------IAAGE-LEK 203
+ G PDV+ Y +++ ++ + GE L+
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKM 597
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+D ++ G PNV TY +I C G F EA ++ +ME P+ + + ++
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L + +A ++ M+ +G
Sbjct: 658 VLLQRNETDKAEKLREEMIARG 679
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 74 EGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
GY P+++T+N ++ C + K LD LL + G+ D TY L++ L K
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ----GYLFDQFTYGTLINGLSKNG 174
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AAL+LL M++ P+++ ++ L+DGL + G + ++ +G + D V Y
Sbjct: 175 QIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN 234
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + G ++ L M+ + P+ +T+N +I C G+ EA ++ M R
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + YN L+ + + EA E+ MV++G
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 10/285 (3%)
Query: 5 GFPTTARTFNILICTC----GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
G + TF ILI C A ++ +KS ++P ++N I++ +
Sbjct: 85 GISPSIATFTILI-NCYFHQSHTAFAFSLLATILKS---GYQPNLVTFNTIINGFCINGM 140
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+K +++ Q + +GY D TY ++ + G++ LL EM +S P+ Y+
Sbjct: 141 IFKALDFC-QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K AL L + + E G + + +L+DG G +M +
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD + ++I + G + +AQ + M +G+ P++ TYN+++ G+C EA
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M RG P+ L YN L+ + EA + + + K
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 1/215 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G +N+LI + + + + F + + N P SYN+++ L + +
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M D G +PD++TYNI++ A + D+ L ++ G PDF+T +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHA 584
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L KG+K A + L H+ G P+V +T L++ L + G+ +M +
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
PD + + ++I + E +KA+ L + MI +G
Sbjct: 645 RPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ N M V P F L+ + R G+ F ++ +KG P + +T++I
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y A L ++ G PN+ T+N++I GFC+ G +A + + ++G
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ Y TL++ L G++ A +++ M + +LV
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196
Score = 37.0 bits (84), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 55/124 (44%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R N+D F+ M P + ++ + + G A LF + +KG P++
Sbjct: 32 RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+ +I + A +++ + G PN + +NT+++ G + +A + +++
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 282 VEKG 285
+ +G
Sbjct: 152 LAQG 155
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 128/265 (48%), Gaps = 4/265 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
M+++G T+N LI + G V+ F + + P + +Y ++ HA G
Sbjct: 406 MVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGF 465
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ L +YQ+M G +PD TY++++ + G L H+L EM G P+ TY
Sbjct: 466 LDFALE--MYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTY 523
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI++ + K +AL L M+ GF P + ++ +M+ L G LD + F EM
Sbjct: 524 NIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKR 583
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +PD Y +++ + AG +EKA + M+ G PNV T NS++ F K +
Sbjct: 584 KNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLAD 643
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVS 263
A +++ M G NP+ Y L+S
Sbjct: 644 AYNLLQSMLELGLNPSLQTYTLLLS 668
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 111/219 (50%), Gaps = 3/219 (1%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
W+ +Q G+ D TY ++ R + ++LLD+M + G P+ TYN L+H
Sbjct: 369 WLKRQ---PGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSY 425
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
G+ + A+++ N M+ VG +P + + TL+D ++AG LD + M G PD
Sbjct: 426 GRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDT 485
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y+V+I AG L A LF M+ +G +PN+ TYN MI A + A + ++
Sbjct: 486 FTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRD 545
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M+S G P+ + Y+ ++ L + G L EA V M K
Sbjct: 546 MQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRK 584
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 116/240 (48%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y ++ L +Q+ I + QM +G P+++TYN ++ + R L+ + +E
Sbjct: 381 HTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNE 440
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M R G PD TY L+ + K AL + M+ G P ++ +++ L +AG+
Sbjct: 441 MQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGH 500
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
L A F EM +GC+P++V Y +MI A + A L+ M + G P+ TY+
Sbjct: 501 LAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSI 560
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ G DEA + EM+ + P+ VY LV AG + +A + + M+ G
Sbjct: 561 VMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTG 620
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 136/286 (47%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+ GF T+ ++ G + G K++++ +K +P +YN ++H+
Sbjct: 373 QPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKD---GCQPNVVTYNRLIHSYGRAN 429
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
V+ +M G PD +TY ++ + G LD + M +G SPD TY+
Sbjct: 430 YLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYS 489
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++++ LGK AA L M E G P+++ + ++ ++A N + + +M +
Sbjct: 490 VIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSA 549
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD V Y++++ G L++A+ +F M K +P+ Y ++ + AG ++A
Sbjct: 550 GFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKA 609
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M + G PN N+L+S KLA+A+ +++ M+E G
Sbjct: 610 WQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELG 655
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 84/160 (52%), Gaps = 1/160 (0%)
Query: 134 ALNLLNHMK-EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
ALN +K + GF+ +TT++ L RA A D+M GC P+VV Y +I
Sbjct: 363 ALNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLI 422
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
SY A L A D+F+ M G P+ TY ++I AG D A M + M++ G +
Sbjct: 423 HSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLS 482
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ Y+ +++ L AG LA AH++ MVE+G +LV+
Sbjct: 483 PDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVT 522
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+NI+I + + ++ + + F+P K +Y+ ++ L
Sbjct: 511 MVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGY 570
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E V+ +M + + PD Y +++ + G +++ + M +G P+ T N
Sbjct: 571 LDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNS 630
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
LL + K A NLL M E+G +PS+ +T L+ + A
Sbjct: 631 LLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYTLLLSCCTEA 673
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-- 58
M GF T++I++ G G + F + K N+ P + Y +L L G
Sbjct: 546 MQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVY-GLLVDLWGKAG 604
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
K +W YQ M + G P++ T N ++ A R+ KL + LL M G +P TY
Sbjct: 605 NVEKAWQW-YQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTY 663
Query: 119 NILLHVLGKGDKP 131
+LL + P
Sbjct: 664 TLLLSCCTEARSP 676
>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
Length = 1107
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI-CTC--GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T T+NI+I C C G+V AR + E K P +YN+++
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM---KFRGLVPDTVTYNSMIDGFGK 177
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++M D PD++TYN ++ + GKL EM +G P+ +
Sbjct: 178 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K A+ M+ VG P+ +T+L+D + GNL +EM
Sbjct: 238 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 297
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +VV YT +I A +++A++LF M T G +PN+ +YN++I GF A D
Sbjct: 298 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 357
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ E++ RG P+ L+Y T + L + K+ A V+ M E G
Sbjct: 358 RALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 405
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 134/288 (46%), Gaps = 4/288 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF F++LI ++G+ + ++ F K K F P S N +LH + + +
Sbjct: 59 GFGVFDALFSVLI----DLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++ M G P + TYNI++ + G ++ L +EM G PD TYN ++
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK + + MK++ +P V+ + L++ + G L F+ EM G P+
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y+ ++ ++ G +++A + M G +PN +TY S+I C G +A +
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM G N + Y L+ L +A ++ EA E+ M G +L S
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS 342
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 133/277 (48%), Gaps = 1/277 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P T T+N +I G+VG V F + K P +YNA+++ + +
Sbjct: 163 PDTV-TYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 221
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y++M G P++++Y+ ++ A + G + Q + +M R G P+ +TY L+
Sbjct: 222 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 281
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A L N M +VG + +V+ +T L+DGL A + + F +M G +P++
Sbjct: 282 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 341
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I ++ A +++A +L + + +G P++ Y + I G C K + A +M EM
Sbjct: 342 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM 401
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ G N L+Y TL+ +G E ++ M E
Sbjct: 402 KECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 438
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+ LI + ++ E F K P SYNA++H + +
Sbjct: 296 MLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKN 355
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ G PD+L Y + L K++ +++EM G + Y
Sbjct: 356 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 415
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK- 179
L+ K P L+LL+ MKE+ + +V+ F L+DGL + + +F+ ++N
Sbjct: 416 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 475
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G + +T MI ++E A LF+ M+ KG +P+ Y S++ G G EA
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 535
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M G + L Y +LV L + +L +A + M+ +G
Sbjct: 536 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 581
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 113/247 (45%), Gaps = 1/247 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y A++ L + K E ++ +M G P++ +YN ++ + +D+ LL+E+
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD Y + L +K AA ++N MKE G + L +TTLMD ++GN
Sbjct: 367 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK-GQLPNVFTYNS 225
+ DEM VV + V+I + KA D F+ + G N + +
Sbjct: 427 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 486
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
MI G C + + A T+ ++M +G P+ Y +L+ G + EA + M E G
Sbjct: 487 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 546
Query: 286 KYIHLVS 292
+ L++
Sbjct: 547 MKLDLLA 553
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 90/237 (37%), Gaps = 50/237 (21%)
Query: 106 MGRSGFSPDFHTYNILLH------------------VLGKGDKPL--------------- 132
M R+GF +Y I+ H VL K D +
Sbjct: 1 MTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGF 60
Query: 133 -----------------AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
A+ + MK P L+ ++ G D K FF +
Sbjct: 61 GVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKD 120
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G P V Y +MI G++E A+ LF+ M +G +P+ TYNSMI GF G+
Sbjct: 121 MIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGR 180
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D+ +EM+ C P+ + YN L++ GKL E R M G ++VS
Sbjct: 181 LDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 237
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 109/257 (42%), Gaps = 6/257 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ + +E + + K +P SY+ ++ A + Y
Sbjct: 202 TYNALINCFCKFGKLPIG---LEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 258
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M G P+ TY ++ A ++G L RL +EM + G + TY L+ L
Sbjct: 259 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 318
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
++ A L M G P++ + L+ G +A N+D +E+ +G PD++ Y
Sbjct: 319 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 378
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I + ++E A+ + + M G N Y +++ + +G E ++ EM+
Sbjct: 379 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 438
Query: 249 RGCNPNFLVYNTLVSNL 265
+ + L+ L
Sbjct: 439 LDIEVTVVTFCVLIDGL 455
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G T+NI I E G + V R + P +YN ++ L
Sbjct: 215 VIQRGMSINLFTYNIWIRGLCEAGRLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSM 273
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M ++G PD TYN ++ ++ + + LL + GF PD TY
Sbjct: 274 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 333
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L AL L N + G P ++ + +L+ GL G + +EMA +G
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+ Y ++I G + A + + I KG LP+VFT+N++I G+C K D A
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 453
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M G P+ + YN++++ L AGK+ E +E + M+ KG
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 143/283 (50%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYK 62
GF T+ LI G + +E F +++ +P YN+++ L G+ +
Sbjct: 323 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 382
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L V +M++EG PDI TYNIV+ ++G + ++++ G+ PD T+N L+
Sbjct: 383 L--QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 440
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K +AL L+ M E G P + + ++++GL +AG ++ F EM KGC
Sbjct: 441 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 500
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ + Y ++I ++ + ++E+A + M +G P+ ++N++I GFC G + A +
Sbjct: 501 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 560
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++E +G + +NTL+ + A ++ M+ KG
Sbjct: 561 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 603
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN I+ I + + + +G+ PD +TY ++ G +++ L
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+E G PD YN L+ L L AL ++N M E G P + + +++GL +
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN+ ++ KG +PDV + +I Y +L+ A L + M G P+ T
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS++ G C AGK +E +EM +GC+PN + YN L+ N + K+ EA +VI M
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530
Query: 283 EKGKYIHLVS 292
++G + VS
Sbjct: 531 QEGLHPDAVS 540
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 130/330 (39%), Gaps = 65/330 (19%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G R V+ F + LF P +YNAI+ AL+ + VY +M G +PD+
Sbjct: 64 ARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDL 123
Query: 81 LTYNI-------------------------------VMCAKYRLGKLDQFHRLLDEMGRS 109
T+ I V+C Y G +L D+M +
Sbjct: 124 HTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHT 183
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD---------------------- 147
P+ +N +LH L K L A LL + + G
Sbjct: 184 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA 243
Query: 148 ------------PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
P V+ + TL+ GL + ++ M N+GC+PD Y +I Y
Sbjct: 244 VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGY 303
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+++A +L + KG +P+ TY S+I G C G + A + E +++G P+
Sbjct: 304 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 363
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+VYN+LV L G + A +V+ M E+G
Sbjct: 364 VVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +T+NI+I C G + A V+ I + + P ++N ++
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI---MKGYLPDVFTFNTLIDGYCK 445
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M + G APD +TYN V+ + GK+++ + EM G P+ T
Sbjct: 446 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 505
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ + +K A ++ M + G P + F TL+ G R G+L+ F ++
Sbjct: 506 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 565
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG + +I ++ + A+ +FD M++KG + +TY +I G C D
Sbjct: 566 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 625
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM +G P+ + ++++L ++ +A +I MV+ G
Sbjct: 626 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 673
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 14/289 (4%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I G+ TFN LI C ++ A ++VER + + P +YN++L+ L
Sbjct: 425 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE---YGIAPDTITYNSVLNGLCKA 481
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + +Q+M +G P+ +TYNI++ R K+++ +++ +M + G PD ++
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L++ + A L ++E G+ + F TL+ S N+ + FDEM +
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG D Y V+I +++A MI KG +P++ T+ +I + + +
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 661
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK--LAEAHEVIRHMVEKG 285
A ++ M G P +V + NA K +A ++ +++KG
Sbjct: 662 AVGIIHIMVKIGVVPE------VVDTILNADKKEIAAPKILVEDLMKKG 704
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Query: 146 FDPSVLH--FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P+ +H + + +RAG L F+ M C P Y ++ + + A ++
Sbjct: 47 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A ++ M+ G P++ T+ +R FC+ + A +++ + RG + Y T+V
Sbjct: 107 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVC 162
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L G +A ++ M+ + +L +
Sbjct: 163 GLYAHGHTHDARQLFDQMLHTHVFPNLAA 191
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H +J + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 128 FNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 187
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 188 ASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVD 247
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A L D M KG P+ TY ++I
Sbjct: 248 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLI 307
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 308 DGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVG 365
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ JA+ V + K + RP SYN +++ +
Sbjct: 116 ILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 172
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K D + L DEM G P+
Sbjct: 173 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVX 232
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 292
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 293 XKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSV 352
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 353 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 407
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 252 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCC 311
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +A M + + +T L+ GL G + EM + G PD
Sbjct: 312 KEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDAR 371
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 372 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 6/195 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G F LI C G V LA ++ ++ + L P +YN +++ L
Sbjct: 221 MLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSL---SPDLITYNTLIYGLCK 277
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +MS +G PD +TY ++ + G LD M + D
Sbjct: 278 KGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVX 337
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + A +L M VG P +T +++ + G++ EM
Sbjct: 338 YTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 397
Query: 178 NKGCMPDVVCYTVMI 192
G +P VV Y V++
Sbjct: 398 RDGHVPSVVTYNVLM 412
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 6/126 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ LI C G++ A + +R I+ N R + Y A++ L
Sbjct: 291 MSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQE---NXRLDEVXYTALISGLCX 347
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + ++M G PD TY +++ + G + + +LL EM R G P T
Sbjct: 348 EGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 407
Query: 118 YNILLH 123
YN+L++
Sbjct: 408 YNVLMN 413
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 6/275 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L+ C+ V AR++ R +K L P +YN ++ + ++
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGL---EPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+++ ++ P I +YN ++ G++ +LLDEM S PD TYNIL+ L K
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ L AL +L M + G P+++ + +MDG N++ K F+ M G PD++ Y
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+I Y +++A LF M K +P++ +YNS+I G C G+ ++ EM
Sbjct: 479 NVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
G +P+ + YN L+ +A + R +VE
Sbjct: 539 SGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 137/325 (42%), Gaps = 35/325 (10%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G A T+N LI C VG ++V + K N P ++N ++ AL +
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ V MS G PDI+TYN +M + + L + M + G PD YN+L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K A+ L + P++ + +L+DGL +G + K DEM
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK------- 235
PDVV Y ++I + G + +A + M+ KG PN+ TYN+M+ G+C+
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462
Query: 236 ----------------------------FDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
DEA + KEM + P+ YN+L+ L N
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ E++ M + G+ +++
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVIT 547
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 115/224 (51%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+ + G D +TYN ++ +G+ + +LL +M R PD +T+NIL+ L K
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ L A +L M + G P ++ + LM+G N+ + F+ M +G PDV+ Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+I Y +++A LF + K +P + +YNS+I G C +G+ ++ EM
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + YN L+ L G++ EA V+ M++KG ++V+
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVT 442
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 137/320 (42%), Gaps = 34/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +N+LI + + + + F + N P SYN+++ L +
Sbjct: 326 MVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M PD++TYNI++ A + G++ + +L M + G P+ TYN
Sbjct: 386 ISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNA 445
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + A ++ N M + G +P +L++ L++G + +D F EM +K
Sbjct: 446 MMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKN 505
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD+ Y +I G + Q+L D M GQ P+V TYN ++ FC FD+A
Sbjct: 506 LIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAI 565
Query: 241 TM----------------------------------MKEMESRGCNPNFLVYNTLVSNLR 266
++ +K + GC+PN Y L++ L
Sbjct: 566 SLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 267 NAGKLAEAHEVIRHMVEKGK 286
G EA ++ M + +
Sbjct: 626 KDGSFGEAMLLLSKMEDNDR 645
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 119/250 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + ++ +L A++ + Y ++ Q+ +G +P I T+ I++ + L
Sbjct: 53 PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L + +SG+ P+ T+N +++ AL+ ++ G+ + TL++GLS+
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + A + EM P++V Y+ +I G + A L + +G L + T
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS+I G C G++ E ++ +M +P+ +N L+ L G++ EA V+ M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 283 EKGKYIHLVS 292
++G+ +V+
Sbjct: 293 KRGEKPDIVT 302
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 45/322 (13%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+N PT A ++N LI C G + +K+++ S P +YN ++ AL +
Sbjct: 364 KNLVPTIA-SYNSLIDGLCNSGRISHVKKLLDEMHGSAQ---PPDVVTYNILIDAL--CK 417
Query: 60 QYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++E V M +G P+I+TYN +M ++ + + M +SG PD
Sbjct: 418 EGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILN 477
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L++ K + A+ L M+ P + + +L+DGL G + + DEM
Sbjct: 478 YNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMC 537
Query: 178 NKGCMPDVVCYTVMITSY---------------------------------IAAGE-LEK 203
+ G PDV+ Y +++ ++ + GE L+
Sbjct: 538 DSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKM 597
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+D ++ G PNV TY +I C G F EA ++ +ME P+ + + ++
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L + +A ++ M+ +G
Sbjct: 658 VLLQRNETDKAEKLREEMIARG 679
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 107/216 (49%), Gaps = 8/216 (3%)
Query: 74 EGYAPDILTYNIVM---CAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
GY P+++T+N ++ C + K LD LL + G+ D TY L++ L K
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQ----GYLFDQFTYGTLINGLSKNG 174
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AAL+LL M++ P+++ ++ L+DGL + G + ++ +G + D V Y
Sbjct: 175 QIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYN 234
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + G ++ L M+ + P+ +T+N +I C G+ EA ++ M R
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + YN L+ + + EA E+ MV++G
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 124/285 (43%), Gaps = 10/285 (3%)
Query: 5 GFPTTARTFNILICTC----GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIR 59
G + TF ILI C A ++ +KS ++P ++N I++ +
Sbjct: 85 GISPSIATFTILI-NCYFHQSHTAFAFSLLATILKS---GYQPNLVTFNTIINGFCINGM 140
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+K +++ Q + +GY D TY ++ + G++ LL EM +S P+ Y+
Sbjct: 141 IFKALDFC-QNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYS 199
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K AL L + + E G + + +L+DG G +M +
Sbjct: 200 ALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRE 259
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PD + ++I + G + +AQ + M +G+ P++ TYN+++ G+C EA
Sbjct: 260 NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEA 319
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M RG P+ L YN L+ + EA + + + K
Sbjct: 320 RELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNK 364
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 107/215 (49%), Gaps = 1/215 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G +N+LI + + + + F + + N P SYN+++ L + +
Sbjct: 466 MVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGR 525
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + +M D G +PD++TYNI++ A + D+ L ++ G PDF+T +
Sbjct: 526 IPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEGIWPDFYTNHA 584
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L KG+K A + L H+ G P+V +T L++ L + G+ +M +
Sbjct: 585 IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDND 644
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
PD + + ++I + E +KA+ L + MI +G
Sbjct: 645 RPPDAITFEIIIGVLLQRNETDKAEKLREEMIARG 679
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 72/158 (45%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ N M V P F L+ + R G+ F ++ +KG P + +T++I
Sbjct: 39 AVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILIN 98
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y A L ++ G PN+ T+N++I GFC+ G +A + + ++G
Sbjct: 99 CYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ Y TL++ L G++ A +++ M + +LV
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLV 196
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 24/124 (19%), Positives = 55/124 (44%)
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R N+D F+ M P + ++ + + G A LF + +KG P++
Sbjct: 32 RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+ +I + A +++ + G PN + +NT+++ G + +A + +++
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 282 VEKG 285
+ +G
Sbjct: 152 LAQG 155
>gi|302763707|ref|XP_002965275.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
gi|300167508|gb|EFJ34113.1| hypothetical protein SELMODRAFT_83272 [Selaginella moellendorffii]
Length = 445
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 136/281 (48%), Gaps = 12/281 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++N LI C+ G + AR+ ++ K P + +YNA+ G+ + L++ +
Sbjct: 85 SYNTLIDALCSSGRIQEAREELQAMAKR---GVAPNRVTYNAMA---TGLGKAGLLDEAF 138
Query: 69 Q---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ M G+A +T+N V+ + GK D+ ++++ M P+ T N++LH
Sbjct: 139 ELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNILTLNLILHAF 198
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K +P AL + + M E+GF P+++ F L++ +D+ + MA C P+
Sbjct: 199 CKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNF 258
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y++M+ + G + +A+ + ++ G PN+ N+ + G C G+ D A +
Sbjct: 259 VTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTV 318
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
M GC N YN+LV G++ EA V+ M+ +G
Sbjct: 319 MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGS 359
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 135/286 (47%), Gaps = 8/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF TA TFN ++ C G+ A KV+E + L N P + N ILHA
Sbjct: 144 MESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETML---LRNIEPNILTLNLILHAFCK 200
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M + G+ P I+T+N ++ ++D LL+ M RS P+F T
Sbjct: 201 AARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETMARSKCKPNFVT 260
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+I++ + + + A L + G+ P++L + GL + G +D F MA
Sbjct: 261 YSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMA 320
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC + Y ++ + G +++A+ + + MI +G LP+ TY+ +I+G C AG+
Sbjct: 321 EEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIV 380
Query: 238 EACTMMKEMES--RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A +M ++ P+ + L+ L G++ A V+ M
Sbjct: 381 HAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 11/279 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEW 66
T+ L+ C GE A+++V F + + +LH L+ G + +L++
Sbjct: 16 TYGTLVHGHCLAGEFDEAKRLVAEFKDTGM------SPGSLVVLHNLMLKGFSEARLVDE 69
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ P+ ++YN ++ A G++ + L M + G +P+ TYN + LG
Sbjct: 70 AKSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLG 129
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A L+ M+ GF + + F +++ L ++G D + M + P+++
Sbjct: 130 KAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGKPDEACKVMETMLLRNIEPNIL 189
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+++ ++ A E+A + D M+ G P + T+N+++ FC + D A +++ M
Sbjct: 190 TLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAELLETM 249
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PNF+ Y+ +V G++ EA + +V G
Sbjct: 250 ARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVCG 288
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 34/99 (34%)
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRG------------------------------ 250
FTY +++ G C+AG+FDEA ++ E + G
Sbjct: 15 FTYGTLVHGHCLAGEFDEAKRLVAEFKDTGMSPGSLVVLHNLMLKGFSEARLVDEAKSHL 74
Query: 251 ----CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PN + YNTL+ L ++G++ EA E ++ M ++G
Sbjct: 75 HRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRG 113
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 138/286 (48%), Gaps = 7/286 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFI--KSKLFNFRPFKNSYNAILHALLGIRQ 60
E+G A ++ CG+ G + RF SK +R +Y A++ +RQ
Sbjct: 99 ESGVTMRAGLTERVLNRCGDAG---NLGYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQ 155
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL-DQFHRLLDEMGRSGFSPDFHTYN 119
+ + + ++M + IV+ ++ +L ++ +LDEM + G PD + +
Sbjct: 156 FGAVWALLEEMRKDNSVLITSELFIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFG 215
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL L K A +L M+ V F PS+ HFT+L+ G R G L K+ +M
Sbjct: 216 CLLDALCKNGSVKQAASLFEDMR-VRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREA 274
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+V + ++++Y AG++ A DL M+ KG PN +Y MI+ FC K DEA
Sbjct: 275 GFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEA 334
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EME GC + + Y L+S GK+ ++++ M +KG
Sbjct: 335 MRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKG 380
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 127/271 (46%), Gaps = 8/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G V A + E F P + ++L+ R+ KLIE V QM +
Sbjct: 221 LCKNGSVKQAASLFEDM----RVRFSPSLRHFTSLLYGW--CREGKLIEAKHVLVQMREA 274
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ PDI+ +N ++ A GK+ LL EM R G P+ ++Y I++ +K A
Sbjct: 275 GFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEA 334
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ + M+ G + V+ +T L+ G + G ++ D M KG MP+ + Y ++ +
Sbjct: 335 MRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLA 394
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ ELE+ +L + M G +P++ YN +IR C G+ + + EME+ +P
Sbjct: 395 HEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPE 454
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ G L EA E + M+ +G
Sbjct: 455 LDTFVIMIHGFLGQGCLVEACEYFKEMIGRG 485
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 117/285 (41%), Gaps = 2/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E GF FN L+ G + + P NSY ++ A +
Sbjct: 271 MREAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEK 330
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V+ +M G D++TY ++ + GK+++ +++LD M + G P+ TY
Sbjct: 331 MDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLR 390
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L K ++ L L+ M+ VG P + + ++ + G + ++EM
Sbjct: 391 ILLAHEKKEELEECLELIESMRMVGCVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASD 450
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL--PNVFTYNSMIRGFCMAGKFDE 238
P++ + +MI ++ G L +A + F MI +G L P ++ K
Sbjct: 451 FSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGM 510
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
A + + ++GC N + + +L + G + EA M+E
Sbjct: 511 AKDVWSCIVTKGCELNADAWTIWIHSLFSNGHVKEACSYCLDMME 555
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 134/268 (50%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V A +V + + + + P +++Y A+++ I Q + E + M G
Sbjct: 183 CRAGNVRRASEVFDECVGNGI---EPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVG 239
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ + +N ++ R +D+ + M + G D +TYN L L + ++ A NL
Sbjct: 240 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 299
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M E G P+ + +TTL+ G++ + F EMA G P +V Y VM+ YI
Sbjct: 300 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 359
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A+ + M KG +P++++Y +++ G C+ GK D A + +EM+ RG PN +
Sbjct: 360 KGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 419
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y L+S L G+ EA ++ +M+ G
Sbjct: 420 YTALISGLAKEGRSEEAFQLYDNMLGDG 447
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L+ ++V+ + G++ +LLDEM R G + YN LL + +L
Sbjct: 68 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 127
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G +P+V +T L+DGLS A ++ + F+EM +K DV Y+ +I +Y AG
Sbjct: 128 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 187
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV--- 257
+ +A ++FD + G PN TY ++I GFC G+ + A ++ +M+ RG N +V
Sbjct: 188 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 247
Query: 258 --------------------------------YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL LR A ++ EA ++R M+EKG
Sbjct: 248 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 307
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 3/207 (1%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I+ + ++M G D+ TYN + C R ++D+ LL M G P+ +Y L+
Sbjct: 264 IKMIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 320
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + A L M G +PS++ + +MDG + G++ + F +EM KG +P
Sbjct: 321 IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVP 380
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D+ Y ++ + G+++ A LF+ M +G PN+ Y ++I G G+ +EA +
Sbjct: 381 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 440
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G P+ +Y+ LV +L K
Sbjct: 441 DNMLGDGLTPDDALYSALVGSLHTDKK 467
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 3/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P +A C G V AR++++ + + YN++L A + +
Sbjct: 67 PLSASVVVDGYCKSGRVAHARQLLDEMPR---HGVKVNALCYNSLLDAYTREKDDDRVAE 123
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M +EG P + TY I++ + + + +EM S D + Y+ +++
Sbjct: 124 MLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYC 183
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A + + G +P+ + L++G + G ++A + +M +G + +
Sbjct: 184 RAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQI 243
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ MI Y ++KA ++ M G +V+TYN++ G A + DEA +++ M
Sbjct: 244 VFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIM 303
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G PN + Y TL+S N G + EA + R M G LV+
Sbjct: 304 IEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 349
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 5 GFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N L C + A+ ++ I+ + RP SY ++ + +
Sbjct: 272 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV---RPNHVSYTTLIS--IHCNEG 326
Query: 62 KLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++E ++++M+ G P ++TYN++M + G + + R +EM + G PD ++Y
Sbjct: 327 DMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYA 386
Query: 120 ILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
L+H V GK D AL L MK+ G P+++ +T L+ GL++ G + +D M
Sbjct: 387 ALVHGHCVNGKVD---VALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNM 443
Query: 177 ANKGCMPDVVCYTVMITS 194
G PD Y+ ++ S
Sbjct: 444 LGDGLTPDDALYSALVGS 461
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G ++ LI C G++ AR++ + P +YN ++ +
Sbjct: 303 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN---GAEPSLVTYNVMMDGYIK 359
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E +M +G PDI +Y ++ GK+D RL +EM + G P+
Sbjct: 360 KGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 419
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
Y L+ L K + A L ++M G P ++ L+ L
Sbjct: 420 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 462
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 139/281 (49%), Gaps = 5/281 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +GF T++IL G ++ ++ F K + + +L+ L +
Sbjct: 301 MVPDGF-----TYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 355
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E V Q + + G P + YN ++ + G+L+ +M PD TYN
Sbjct: 356 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 415
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K ++ A +LL M++ G +P+V F TL+D R G L+ C EM G
Sbjct: 416 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 475
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y ++ ++ G++ +A + D M K LPN YN++I + G D+A
Sbjct: 476 LKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAF 535
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++++M+S G +P+ + YN L+ L N +++EA E+I +
Sbjct: 536 ILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 576
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P A ++N++I G VE F + P +YN ++ + +
Sbjct: 197 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 256
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ QM G P+ +TYN+++ R G++ + LLDEM PD TY+IL L
Sbjct: 257 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 316
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A L+L + G + L++GL + G + + + N G +P V
Sbjct: 317 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 376
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y GELE A F M ++ P+ TYN++I G C A + A ++ EM
Sbjct: 377 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 436
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G NP +NTL+ G+L + V+ M E G ++VS
Sbjct: 437 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 482
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 140/287 (48%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++NG T +IL+ C G+V +A +V++ + + L P + YN +++
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV---PTRVIYNTLINGYCQT 388
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + QM PD +TYN ++ + ++ LL EM +G +P T+
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G+ + +L+ M+E G P+V+ + ++++ + G + D+M +
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +P+ Y +I +Y+ G ++A L + M + G P++ TYN +I+G C + E
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 568
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ + + P+ + YNTL+S G + +A ++ + M + G
Sbjct: 569 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 136/303 (44%), Gaps = 6/303 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G T +N LI + G F + K + +P +YNA+++ L +
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D G P + T+N ++ A R G+L++ +L EM +G P+ +Y
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K K A+ +L+ M P+ + ++D G D ++M + G
Sbjct: 486 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P +V Y ++I ++ +A+++ + + +P+ +YN++I C G D+A
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK----GKYIH--LVSKF 294
+ + M G Y+ L+S L AG+L E + + M++ IH +V +
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665
Query: 295 KRY 297
+Y
Sbjct: 666 SKY 668
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF-SPDFHTYNILLHVLGKGD 129
++ G PD +N + A G L + +L MGR G P+ +YN+++ + +
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 214
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ + + M E P+ + + T++DG + G+L+A D+M G P+ + Y
Sbjct: 215 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 274
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
V+++ AG + + L D M ++ +P+ FTY+ + G G ++ +
Sbjct: 275 VLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKN 334
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + L++ L GK++ A EV++ +V G
Sbjct: 335 GVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAG 370
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 74/205 (36%), Gaps = 35/205 (17%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A+ +N +I E G + K K P +YN ++ L Q E +
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 574
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+S+ PD ++YN ++ A G +D+ L M + G TY+
Sbjct: 575 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH---------- 624
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
L+ GL AG L+ +Y + +M +P +
Sbjct: 625 -------------------------QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHN 659
Query: 190 VMITSYIAAGELEKAQDLFDGMITK 214
+M+ +Y G KA+DL M+ K
Sbjct: 660 IMVEAYSKYGNEIKAEDLRKEMLQK 684
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G+ TF+ LI C G V A ++V+R ++ +P + NA+++ L
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE---MGHKPTLITLNALVNGLCL 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M + G+ P+ +TY V+ + G+ LL +M D
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+I++ L K A NL N M+ GF ++ +TTL+ G AG D +M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PDVV ++ +I ++ G+L +A++L MI +G P+ TY S+I GFC + D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M+ M S+GC PN +N L++ A + + E+ R M +G
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 15/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E GF T+ ++ C G+ LA RK+ ER IK Y+ I+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK-------YSIIID 255
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L ++ +M +G+ DI+ Y ++ G+ D +LL +M + +P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D ++ L+ K K A L M + G P + +T+L+DG + LD +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC P++ + ++I Y A ++ +LF M +G + + TYN++I+GFC
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
GK + A + +EM SR P+ + Y L+ L + G+ +A E+ +EK K
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK-IEKSK 487
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF + LI C G K++ IK K+ P +++A++ + +
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCFVKEGKL 333
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ E ++++M G +PD +TY ++ + +LD+ + +LD M G P+ T+NIL
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K + L L M G + + TL+ G G L+ K F EM ++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y +++ GE EKA ++F+ + ++ YN +I G C A K D+A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +G P+ YN ++ L G L+EA + R M E G
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 116/243 (47%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP ++ + + +QY L+ + +QM +G A ++ T +I++ R KL
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ ++ + G+ PD T++ L++ L + AL L++ M E+G P+++ L++GL
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G + D M G P+ V Y ++ +G+ A +L M + +
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y+ +I G C G D A + EME +G + ++Y TL+ AG+ + +++R M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 282 VEK 284
+++
Sbjct: 309 IKR 311
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 45 KNSYNAILHA-LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
K SY L + ++ I++ ++ ++Q+M+ P ++ ++ + R + D L
Sbjct: 37 KVSYRERLRSGIVDIKEDDAVD-LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M G + + +T +I+++ + K A + + + ++G++P + F+TL++GL
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + D M G P ++ ++ G++ A L D M+ G PN TY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++ C +G+ A ++++ME R + + Y+ ++ L G L A + M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 284 KG 285
KG
Sbjct: 276 KG 277
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 9/204 (4%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N LI C G++ +A+++ + + ++ RP SY +L L +
Sbjct: 417 GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV---RPDIVSYKILLDGLCDNGEP 473
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +++++ DI YNI++ K+D L + G PD TYNI+
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A L M+E G P+ + L+ G+ +E+ K C
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI--KRC 591
Query: 182 MPDVVCYTV-MITSYIAAGELEKA 204
V TV M+ ++ G L+K+
Sbjct: 592 GFSVDASTVKMVVDMLSDGRLKKS 615
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+NI+I C +V A + F L +P +YN ++ L + +++
Sbjct: 495 YNIIIHGMCNASKVDDAWDL---FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFR 551
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M ++G++P+ TYNI++ A G + +L++E+ R GFS D T +++ +L G
Sbjct: 552 KMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGR 611
Query: 130 KPLAALNLLN 139
+ L++L+
Sbjct: 612 LKKSFLDMLS 621
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
N +P SY+ I+ L + ++++M G PD+++Y ++ R GK
Sbjct: 633 INCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKD 692
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L +EM G PD T+++L+ +L K K + A LL M + G P+ + +TTL+
Sbjct: 693 AKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 752
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT-KGQL 217
GL + F +M GC+PDVV Y ++ G ++ A +L M++ GQ
Sbjct: 753 GLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 812
Query: 218 -----PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
P+V +Y+ +I G C G+ DEA + KEM++ G PN + Y +L+ +GKL
Sbjct: 813 GTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLE 872
Query: 273 EAHEVIRHMVEKGKYIHLVS 292
+A + MV++G ++ V+
Sbjct: 873 DAKHLFNEMVDQGVQLNAVT 892
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 140/274 (51%), Gaps = 12/274 (4%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A +++I+I C CG AR E F + K P SY +++H ++K ++
Sbjct: 639 AISYSIIIDGLCKCGREDEAR---ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M D G PD+ T+++++ + GK+ + + LL+ M + G P+ TY L+ L
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC----KYFFDEMANKGC- 181
D+ A L M+++G P V+ + TLM GL + GN+ K + G
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815
Query: 182 -MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y+++I G ++A++LF M G +PNV +Y S+I GFC +GK ++A
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ EM +G N + Y+ ++ G++ +A
Sbjct: 876 HLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 141/282 (50%), Gaps = 11/282 (3%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALLGIRQYKLIEW 66
TT+ ++C G+V A +++E I+ + + +Y+ ++ L + W
Sbjct: 55 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV----TYSTLIKGLCMEHRISEATW 110
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHR-LLDEMGRSGFS--PDFHTYNI 120
++ M G PD +TY +M + G ++ Q H+ +L++ GR G P +Y+I
Sbjct: 111 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 170
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + A L MK G P V+ +T+L+ G +G + K F+EM + G
Sbjct: 171 IIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG 230
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV V+I + G++ +A +L + M+ +G + ++ TY+++I+G CM + EA
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEAT 290
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ M+ GC P+ + Y TL+ L GK+ A + + M+
Sbjct: 291 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEML 332
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 121/228 (53%), Gaps = 7/228 (3%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHR-LLDEMGRSGFS--PDFHTYNI 120
++ +M G P+++T +M + G + + H+ +L + G + P+ +Y+I
Sbjct: 585 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 644
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + A L MK +G P V+ +T+L+ G R+G KY F+EM + G
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIG 704
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV ++V+I G++ +A +L + MI +G +PN TY ++++G CM + EA
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 764
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV-EKGKY 287
+ +M+ GC P+ + Y TL+ L G + A E+ + M+ + G+Y
Sbjct: 765 QLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQY 812
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 135/261 (51%), Gaps = 6/261 (2%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F + K P SY ++H +++ + ++ +M D G PD+ T ++++
Sbjct: 479 ELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDML 538
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ GK+ + ++LL+ + + G D T L+ L + A L M+++G P+V
Sbjct: 539 CKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNV 598
Query: 151 LHFTTLMDGLSRAGN----LDACKYFFDEMANKG--CMPDVVCYTVMITSYIAAGELEKA 204
+ TLM GL ++GN L+ K + + G C P+ + Y+++I G ++A
Sbjct: 599 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 658
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++LF M G +P+V +Y S+I GFC +GK+ +A + EM G P+ ++ L+
Sbjct: 659 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 718
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L GK+ EA+E++ M+++G
Sbjct: 719 LCKEGKVIEANELLEVMIQRG 739
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 140/282 (49%), Gaps = 11/282 (3%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALLGIRQYKLIEW 66
TT+ ++C G+V A +++E I+ + + +Y+ ++ L + W
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIV----TYSTLIKGLCMEHRISEATW 403
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLD---QFHR-LLDEMGRSGFS--PDFHTYNI 120
++ M G PD +TY +M + G ++ Q H+ +L++ GR G P +Y+I
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K + A L MK G P V+ +TTL+ G +G + K F+EM + G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV +V+I G++ +A L + +I +G + +V T ++++G CM + +A
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ +M+ GC PN + TL+ L +G + A E+ ++M+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNML 625
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 21/274 (7%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI----------- 85
+L P ++N +++ L +++ + GY PDI+TY+I
Sbjct: 2 RLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLI 61
Query: 86 -VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++C + GK+ + + LL+ M + G D TY+ L+ L + A L M+++
Sbjct: 62 DILCKE---GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------CMPDVVCYTVMITSYIAA 198
G P + + TLM GL + GN++ EM N C P ++ Y+++I
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 178
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
++A++LF M +G +P+V +Y S+I GFC +GK+++A + EM G P+
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L+ GK+ EA+E++ MV +G + +V+
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVT 272
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 131/265 (49%), Gaps = 8/265 (3%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F + K P SY +++H +++ + ++ +M D G PD+ T +++
Sbjct: 186 ELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMF 245
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ GK+ + + LL+ M G D TY+ L+ L + A L MK++G P
Sbjct: 246 CKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDA 305
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMAN-------KGCMPDVVCYTVMITSYIAAGELEK 203
+ + TLM GL + G ++ + EM N K PDV +++I G++ +
Sbjct: 306 IAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIE 365
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A +L + MI +G + ++ TY+++I+G CM + EA + M+ GC P+ + Y TL+
Sbjct: 366 ANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMK 425
Query: 264 NLRNAGKLAEAHEVIRHMV-EKGKY 287
L G + A ++ + M+ + G+Y
Sbjct: 426 GLCQTGNINIALQLHQEMLNDTGRY 450
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 140/278 (50%), Gaps = 13/278 (4%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-------PDI 80
+ + F+ K RP +Y ++ L + + ++Q+M ++ PD+
Sbjct: 288 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDV 347
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
T ++++ + GK+ + + LL+ M + G D TY+ L+ L + A L
Sbjct: 348 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMS 407
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG------CMPDVVCYTVMITS 194
M+++G P + + TLM GL + GN++ EM N C P ++ Y+++I
Sbjct: 408 MQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 467
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
++A++LF+ M +G +P+V +Y ++I GFC++GK+++A + EM G P+
Sbjct: 468 LCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 527
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ L+ L GK+ EA++++ ++++G + +V+
Sbjct: 528 VTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVT 565
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 148/300 (49%), Gaps = 26/300 (8%)
Query: 6 FPTTARTFNILI-CTC-------GEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
FP + TFNILI C C G +A + +I + ++ RP + + ++ L
Sbjct: 7 FPDSF-TFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILC 65
Query: 57 GIRQYKLIEW--VYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGF 111
++ K+IE + + M G DI+TY+ + +C ++R+ + L M + G
Sbjct: 66 --KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRI---SEATWLFMSMQKLGC 120
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNL----LNHMKEVGFD--PSVLHFTTLMDGLSRAGN 165
PD TY L+ L + AL L LN G P+++ ++ ++DGL +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
D + F EM +G MPDV+ YT +I + +G+ EKA+ LF+ M+ G P+V T
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I FC GK EA +++ M RGC + + Y+TL+ L +++EA ++ M + G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 120/272 (44%), Gaps = 12/272 (4%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM-SDEGY-----APDILTYNIV 86
F+ + RP +Y ++ L + ++Q+M +D G P +++Y+I+
Sbjct: 405 FMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSII 464
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+ + + D+ L +EM G PD +Y L+H K A L N M +VG
Sbjct: 465 IDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGI 524
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
P V + L+D L + G + + + +GC+ DVV T ++ + KA
Sbjct: 525 QPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQ 584
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR------GCNPNFLVYNT 260
LF M G +PNV T ++++G C +G A + K M S C PN + Y+
Sbjct: 585 LFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 644
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ L G+ EA E+ + M G ++S
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGVIPDVIS 676
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 15/202 (7%)
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT---------L 156
M +G PD T+NIL++ L + L + + G+ P ++ ++ L
Sbjct: 1 MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+D L + G + + M +GC+ D+V Y+ +I + +A LF M G
Sbjct: 61 IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG------CNPNFLVYNTLVSNLRNAGK 270
P+ TY ++++G C G + A + +EM + C P + Y+ ++ L +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
EA E+ + M +G ++S
Sbjct: 181 EDEARELFKEMKAQGMMPDVIS 202
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 141/286 (49%), Gaps = 15/286 (5%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN L+ C G + A +V+E + N P +Y +++ L + Q ++ ++
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRE---NILPDVITYTILVNGLCRVGQVQVAFYLL 295
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS---------GFSPDFHTYN 119
+++ +GY PD++ Y ++ + G++++ H+L+ EM P TYN
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYN 355
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I+L L K A++L++ + G+ P V+ + TL+DGL +A + DEMA+
Sbjct: 356 IVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASL 415
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P+ V ++ G ++ A L M K PNV Y S+I G C + + D+A
Sbjct: 416 GCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 475
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C ++ M +G + Y L+ ++ + G++AEA + MV +G
Sbjct: 476 CVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARG 521
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ +G TF ILI + G A + +E F+ P +N ++H L
Sbjct: 53 LLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGN 112
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG--FSPDFHTY 118
+++ M PDI TYN V+ + G L++ LL+EM R G +PD TY
Sbjct: 113 PDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTY 172
Query: 119 NILLHV-LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L++ + K AL +L+ MK G P V+ + +++ L AG + M+
Sbjct: 173 NTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS 232
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C PD+V + ++ + AG L +A ++ + M + LP+V TY ++ G C G+
Sbjct: 233 ---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ 289
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A +++E+ +G P+ + Y +LV L +G++ EAH++++ M + +VS
Sbjct: 290 VAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 143/292 (48%), Gaps = 15/292 (5%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
FN LI + G + V+ F + P +YN ++ L + + ++M
Sbjct: 100 FNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMI 159
Query: 73 DEG--YAPDILTYNIVMCAKY-RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
G APDI+TYN ++ A + G +++ +LD M +G +PD TYN ++H L
Sbjct: 160 RRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAG 219
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ + A +L M P ++ F TL+DG +AG L +EM + +PDV+ YT
Sbjct: 220 RVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYT 276
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+++ G+++ A L + ++ +G +P+V Y S++ G C +G+ +EA ++KEM +R
Sbjct: 277 ILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAR 336
Query: 250 ---------GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P YN ++ L G +++A +I +V +G +V+
Sbjct: 337 EILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVT 388
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 6/223 (2%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +W +Q +GY D+ +YN ++ + G + ++ ++ SG SP+ T+ IL
Sbjct: 12 QFFDWAGEQ---DGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKIL 68
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K + AL L + E P V F L+ GL + GN D F+ M +
Sbjct: 69 IRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRV 128
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG--QLPNVFTYNSMIR-GFCMAGKFDE 238
PD+ Y +I+ +G LEKA++L + MI +G P++ TYN++I G C G +E
Sbjct: 129 NPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEE 188
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A ++ M+ G P+ + YN+++ L AG++ EA E+++ M
Sbjct: 189 ALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM 231
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 124/271 (45%), Gaps = 16/271 (5%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
EN P T+ IL+ C G+V +A ++E ++ + P +Y +++ L
Sbjct: 266 ENILPDVI-TYTILVNGLCRVGQVQVAFYLLEEIVRQ---GYIPDVIAYTSLVDGLCKSG 321
Query: 60 Q----YKLIEW-----VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+ +KL++ + +M P + TYNIV+ + G + + L+ ++ G
Sbjct: 322 EIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 381
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
+ PD TYN L+ L K ++ A +L + M +G P+ + +++ GL R G +D
Sbjct: 382 YVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAW 441
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
EM+ K P+VV YT +I + ++ A + D M +G + F Y +I
Sbjct: 442 SLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSM 501
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
G+ EA M EM +RG P+ TL
Sbjct: 502 IHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 127 KGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ +P A+ + E G+ V + L+D L ++G+ + ++ + GC P++
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNL 62
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V + ++I AG+ +A + + P+V+ +N +I G G D+A + +
Sbjct: 63 VTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
MES NP+ YNT++S L +G L +A E++ M+ +G
Sbjct: 123 MESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRG 162
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 112/211 (53%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ PDI T+ ++ ++++ ++++M G PD Y ++ L K A
Sbjct: 136 GFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNA 195
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L+L N M+ G P V+ +T+L++GL +G M + PDV+ + +I +
Sbjct: 196 LSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDA 255
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
++ G+L A++L++ MI PN+FTY S+I G CM G+ DEA M ME++GC P+
Sbjct: 256 FVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPD 315
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y +L++ K+ +A ++ M +KG
Sbjct: 316 VVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 129/283 (45%), Gaps = 6/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF TF LI C + A +V + ++ +P Y I+ +L
Sbjct: 136 GFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE---MGIKPDVVIYTTIIDSLCKNGHV 192
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ QM + G PD++ Y ++ G+ LL M + PD T+N L
Sbjct: 193 DNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNAL 252
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K K L A L N M ++ P++ +T+L++GL G LD + F M KGC
Sbjct: 253 IDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGC 312
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDVV YT +I + ++E A +F M KG N TY ++I+GF + GK + A
Sbjct: 313 FPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQE 372
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M SRG PN YN L+ L GK+ +A + M ++
Sbjct: 373 VFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKR 415
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 8/285 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQ 60
G T N+L+ C + LA + + +K F P ++ ++++ LG R
Sbjct: 101 GVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMK---LGFEPDIFTFTSLINGFCLGNRI 157
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + V QM + G PD++ Y ++ + + G +D L ++M G PD Y
Sbjct: 158 EEAMSMV-NQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + A LL M + P V+ F L+D + G L K ++EM
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++ YT +I G L++A+ +F M TKG P+V Y S+I GFC K ++A
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM 336
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM +G N + Y TL+ GK A EV HMV +G
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRG 381
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 118/245 (48%), Gaps = 1/245 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F R F N Y IL L Q+ ++ M + P I+ + ++ ++ K D
Sbjct: 31 FWVRAFCN-YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDV 89
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L + G S D +T N+L++ + +P A + L + ++GF+P + FT+L++
Sbjct: 90 VINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLIN 149
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G ++ ++M G PDVV YT +I S G ++ A LF+ M G P
Sbjct: 150 GFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP 209
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V Y S++ G C +G++ +A +++ M R P+ + +N L+ GKL +A E+
Sbjct: 210 DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELY 269
Query: 279 RHMVE 283
M++
Sbjct: 270 NEMIQ 274
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 139/287 (48%), Gaps = 3/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G + +I + + G + F + + + RP Y ++++ L +
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + + M PD++T+N ++ A + GKL L +EM + +P+ TY
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + A + M+ G P V+ +T+L++G + ++ F EM+ KG
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + YT +I + G+ AQ++F M+++G PN+ TYN ++ C GK ++A
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKAL 406
Query: 241 TMMKEMESR---GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ ++M+ R G PN YN L+ L GKL +A V M ++
Sbjct: 407 MIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKR 453
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 135/309 (43%), Gaps = 45/309 (14%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G A ++ +K K+ +P ++NA++ A +++ KL++ +Y +M
Sbjct: 221 LCNSGRWRDADLLLRGMMKRKI---KPDVITFNALIDAF--VKEGKLLDAKELYNEMIQM 275
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
AP+I TY ++ G+LD+ ++ M G PD Y L++ K K A
Sbjct: 276 SIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDA 335
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ + M + G + + +TTL+ G G + + F M ++G P++ Y V++
Sbjct: 336 MKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHC 395
Query: 195 YIAAGELEKAQDLFDGMITK---GQLPNVFTYNSMI------------------------ 227
G++ KA +F+ M + G PN+ TYN ++
Sbjct: 396 LCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDM 455
Query: 228 -----------RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
+G C AGK +A + + S+G PN + Y T++S L G + EAH
Sbjct: 456 DIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHV 515
Query: 277 VIRHMVEKG 285
+ R M E G
Sbjct: 516 LFRKMKEDG 524
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 9/195 (4%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA---ALNLLNHMKEVGFDPSV 150
GK F RLL G S + F Y +L G L AL+L +HM E PS+
Sbjct: 18 GKALSFSRLL---GLSFWVRAFCNYR---EILRNGLHSLQFNEALDLFSHMVESRPLPSI 71
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ FT L++ +++ D + G D+ +++ + + + A
Sbjct: 72 IDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGK 131
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
++ G P++FT+ S+I GFC+ + +EA +M+ +M G P+ ++Y T++ +L G
Sbjct: 132 LMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGH 191
Query: 271 LAEAHEVIRHMVEKG 285
+ A + M G
Sbjct: 192 VDNALSLFNQMENYG 206
>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 732
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G P T++ I C +V ++ V K +P Y+A + A Q
Sbjct: 212 MAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQ 271
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + ++M G APD++TY+ V+ A + G+ + RLL EM G + TY+I
Sbjct: 272 WETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSI 331
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + A+ LL M+E G P V+ +++ + ++ G + EM +G
Sbjct: 332 VIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEG 391
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + Y ++I++ G +A DL M G P+V Y++ I A ++++A
Sbjct: 392 VTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQAL 451
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM + G PN + YN+ + G+ A E++R M G
Sbjct: 452 WLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHG 496
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 127/259 (49%)
Query: 27 RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV 86
RK ++ + + +P +Y++ + A RQ++ + M+ G PD+LTY+
Sbjct: 168 RKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSA 227
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+ A ++ + + LL M G P+ Y+ + KG + A++LL M VG
Sbjct: 228 IAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGL 287
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
P V+ ++T++D ++ G + EM KG + +++ Y+++I + G+ E+A
Sbjct: 288 APDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVA 347
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
L M G P+V TY+S I G+++EA +++EM G PN + Y ++S
Sbjct: 348 LLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACA 407
Query: 267 NAGKLAEAHEVIRHMVEKG 285
G+ EA ++++ M G
Sbjct: 408 KRGRWREAIDLLQEMQAHG 426
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 125/274 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++I+I C + G + V + + P +Y++ + A Q++ + ++M
Sbjct: 328 TYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREM 387
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
EG P+ ++Y IV+ A + G+ + LL EM G PD Y+ + + +
Sbjct: 388 PMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRW 447
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL LL M G P+V+ + + +D ++ G EM G PDV+ Y+ +
Sbjct: 448 EQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAV 507
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I S + E+A DLF M +G P+V + N+ I G ++EA ++ EM + G
Sbjct: 508 IASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGL 567
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y T + + E +++R M G
Sbjct: 568 VPDAISYRTAIDACAKGDRWKEIIDLLREMSTVG 601
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 137/285 (48%), Gaps = 8/285 (2%)
Query: 12 TFNILICTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T++ +I C + G R ++E K + N +Y+ ++ A Q++ +
Sbjct: 293 TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANI----ITYSIVIGACAKWGQWEEAVAL 348
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++M + G APD++TY+ + A + G+ ++ LL EM G +P+ +Y I++ K
Sbjct: 349 LREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAK 408
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A++LL M+ G P V++++ +D ++A + + EM G P+V+
Sbjct: 409 RGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVIS 468
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y I + G + A +L M G P+V TY+++I M +++EA + +EM+
Sbjct: 469 YNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQ 528
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G P+ + NT ++ G EA +V+ M G +S
Sbjct: 529 RQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAIS 573
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 131/292 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G ++ ++ I CG + VE P +Y++ + A + +
Sbjct: 177 MQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSR 236
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + + M +G P+++ Y+ + A + G+ + LL EM G +PD TY+
Sbjct: 237 WKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYST 296
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + A LL M G +++ ++ ++ ++ G + EM G
Sbjct: 297 VIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENG 356
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV+ Y+ I++ G+ E+A L M +G PN +Y +I G++ EA
Sbjct: 357 VAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAI 416
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++EM++ G P+ + Y+ + A + +A ++R M G +++S
Sbjct: 417 DLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVIS 468
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 128/281 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G A ++ I+I C + G R+ ++ + + P +Y+A + A +
Sbjct: 387 MPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASR 446
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ W+ ++M G P++++YN + A + G+ LL EM G +PD TY+
Sbjct: 447 WEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSA 506
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ G + AL+L M+ G P V+ T ++ ++ G + EM G
Sbjct: 507 VIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMG 566
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD + Y I + ++ DL M T G P+ +Y + + G + EA
Sbjct: 567 LVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEAL 626
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++++M + G +P+ + YN+ ++ G+ EA ++R M
Sbjct: 627 VLLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQM 667
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 126/280 (45%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
++ I C + G V+ + P +Y+ ++ A Q++ + +M
Sbjct: 259 YSAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMP 318
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+G +I+TY+IV+ A + G+ ++ LL EM +G +PD TY+ + K +
Sbjct: 319 TKGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWE 378
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A+ LL M G P+ + + ++ ++ G EM G PDV+ Y+ I
Sbjct: 379 EAVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAI 438
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ A E+A L M G PNV +YNS I G+ A +++EM + G
Sbjct: 439 DACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLA 498
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P+ + Y+ ++++ + EA ++ R M +G +VS
Sbjct: 499 PDVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVS 538
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 130/307 (42%), Gaps = 9/307 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG T++ I C + G + V + + P SY ++ A +
Sbjct: 352 MQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGR 411
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + Q+M G PD++ Y+ + A + + +Q LL EM +G +P+ +YN
Sbjct: 412 WREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNS 471
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ K + A+ LL M G P V+ ++ ++ + + F EM +G
Sbjct: 472 AIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQG 531
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV I + G E+A D+ M T G +P+ +Y + I ++ E
Sbjct: 532 ITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEII 591
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG---------KYIHLV 291
+++EM + G P+ + Y +S G EA ++R M+ G I+
Sbjct: 592 DLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINAC 651
Query: 292 SKFKRYK 298
+K R+K
Sbjct: 652 AKGGRWK 658
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 134/307 (43%), Gaps = 11/307 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G P ++ I C + + + + P SYN+ + A +
Sbjct: 422 MQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGR 481
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD---EMGRSGFSPDFHT 117
K+ + ++M G APD++TY+ V+ A +G+ Q+ LD EM R G +PD +
Sbjct: 482 SKIAVELLREMPAHGLAPDVITYSAVI-ASCAMGR--QWEEALDLFREMQRQGITPDVVS 538
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N ++ +G AL++L M +G P + + T +D ++ EM+
Sbjct: 539 CNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIIDLLREMS 598
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD + Y +++ G ++A L M+ G P+V TYNS I G++
Sbjct: 599 TVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACAKGGRWK 658
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM----VEKGKYIHLVSK 293
EA ++++M + G P+ +N + N + A EV+ M V + +L +
Sbjct: 659 EATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAM 718
Query: 294 FKRYKRC 300
+ KRC
Sbjct: 719 YA-CKRC 724
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 116/270 (42%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G ++N I C + G ++ VE + P +Y+A++ + RQ
Sbjct: 457 MPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQ 516
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ ++++M +G PD+++ N + A + G ++ +L EM G PD +Y
Sbjct: 517 WEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRT 576
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ KGD+ ++LL M VG P + + M S G +M G
Sbjct: 577 AIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVG 636
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y I + G ++A L M T G P+V ++N+ I ++ A
Sbjct: 637 LSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAV 696
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
++ EM + G +PN Y T + + G+
Sbjct: 697 EVLFEMRALGVSPNEATYLTAMYACKRCGE 726
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 1/189 (0%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D+ GR P H L GD AL++L+ M+E G P ++++ + A
Sbjct: 141 DKGGRQAGMPMSHLKATLREAKQYGDW-RKALDVLDRMQEQGVKPDSQNYSSAIAACGNA 199
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
+ MA +G PDV+ Y+ I + ++A L M +G PNV Y
Sbjct: 200 RQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVY 259
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ I G+++ A ++KEM + G P+ + Y+T++ G+ A ++ M
Sbjct: 260 SAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPT 319
Query: 284 KGKYIHLVS 292
KG ++++
Sbjct: 320 KGVVANIIT 328
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--LLGIRQYK 62
G A ++ I C + +++++ + P SY + A + G+ +
Sbjct: 566 GLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEA 625
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L+ + + M G +PD++TYN + A + G+ + LL +M G +PD +++N +
Sbjct: 626 LV--LLRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAI 683
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G GD+ A+ +L M+ +G P+ + T M R G D
Sbjct: 684 DACGNGDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKRCGEKD 728
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T T+ + GEV R + E + + F P SY+ ++H L Q + +
Sbjct: 395 TLLNTYMDCVFKAGEVEKGRMIFEDI---RSYGFLPDVRSYSILIHGLTKAGQARETSNI 451
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M +G+A D YN V+ + GK+ + + +L+EM P TY ++ L K
Sbjct: 452 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 511
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D+ A L K G + +V+ +++L+DG + G +D +EM KG P+V
Sbjct: 512 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 571
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++ + + A E+ +A F M PN +TY+ +I G C K+++A ++M+
Sbjct: 572 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 631
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN + Y T++S L G + +A+ + G
Sbjct: 632 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 669
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 138/261 (52%), Gaps = 7/261 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF AR +N ++ C G+V A +++E +K K +P +Y AI+ L
Sbjct: 455 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE-MKEKCV--QPTVATYGAIVDGLAK 511
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +L+EM + G +P+ +T
Sbjct: 512 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 571
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL MKE+ P+ ++ L++GL R + F+ +M
Sbjct: 572 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 631
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VV YT MI+ G + A LF+ G +P+ ++N++I G A +
Sbjct: 632 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 691
Query: 238 EA-CTMMKEMESRGCNPNFLV 257
EA T + ++ S C+ NFLV
Sbjct: 692 EAYQTTVYQLSSSSCSWNFLV 712
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 111/229 (48%), Gaps = 37/229 (16%)
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
A R +LD + M R F P F Y +L+ L + +P AL LL M+EVG++
Sbjct: 19 ALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEV 78
Query: 149 SVLHFTTLMDGLSR-----------------------------------AGNLD-ACKYF 172
V FTTL+ L+R AGN+D ACK F
Sbjct: 79 GVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACK-F 137
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F E+ +G PD V YT MI AG L +A++LF M + +P + YN+MI G+
Sbjct: 138 FHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGS 197
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
AG+F++A +++ + RGC P+ + +N++++ L K+ EA + M
Sbjct: 198 AGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 109/217 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V++++ G PD+ N M ++ G++++ + +++ GF PD +Y+IL+H L
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 440
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + N+ + MK+ GF + ++DG ++G + +EM K P V
Sbjct: 441 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 500
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ L++A LF+ +KG NV Y+S+I GF G+ DEA +++EM
Sbjct: 501 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 560
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+G PN +N+L+ L A ++ EA + M E
Sbjct: 561 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 597
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ + G+ PD+ +Y+I++ + G+ + + M + GF+ D YN ++
Sbjct: 416 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 475
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A +L MKE P+V + ++DGL++ LD F+E +KG +VV
Sbjct: 476 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + G +++A + + M+ KG PNV+T+NS++ A + +EA + M
Sbjct: 536 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 595
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ C PN Y+ L++ L K +A + M ++G ++V+
Sbjct: 596 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 641
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N+ I G+ G + F + K +P SY +++ L + E ++ QM
Sbjct: 118 YNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 177
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
E P YN ++ G+ + ++LL+ + G P ++N +L LGK K
Sbjct: 178 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 237
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL+L MK+ +P+ + ++D L G ++ DEM + P+++ +M+
Sbjct: 238 EALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 296
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A +LE+A +F+ +G P+ TY S+I G G+ DEA + ++M G N
Sbjct: 297 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 356
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N +VY +L+ N G+ + H+V + ++ +G
Sbjct: 357 ANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRG 389
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
FRP ++Y ++ AL R+ + + +QM + GY + + ++ A R G++
Sbjct: 39 LKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVAD 98
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L+DE+ S PD YN+ + GK A + +K G P + +T+++
Sbjct: 99 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIW 158
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L +AG L + F +M + +P Y MI Y +AG E A L + + +G +P
Sbjct: 159 VLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 218
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V ++NS++ K DEA ++ + M+ + PN YN ++ L G++ EA+ ++
Sbjct: 219 SVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRIL 277
Query: 279 RHMVEKGKYIHLVS 292
M + +L++
Sbjct: 278 DEMEHASLFPNLLT 291
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 144/288 (50%), Gaps = 13/288 (4%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF--NFRPFKNSYNAILHAL-LGIR 59
E G + +FN ++ TC +G RKV E ++ + P ++YN I+ L LG R
Sbjct: 213 ERGCIPSVVSFNSIL-TC--LGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGR 269
Query: 60 QYKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+E Y+ + + +A P++LT NI++ + KL++ +++ + + G +PD
Sbjct: 270 ----VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 325
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L+ LGK + A L M + G + + + +T+L+ G + F E+
Sbjct: 326 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKEL 385
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+GC PD+ + AGE+EK + +F+ + + G LP+V +Y+ +I G AG+
Sbjct: 386 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 445
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + M+ +G + YN +V +GK+ +A+E++ M EK
Sbjct: 446 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++ P ++ T+NI+I C G V A ++++ + LF P + N ++ L
Sbjct: 246 MKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASLF---PNLLTVNIMVDRLCK 301
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + +++ S G PD +TY ++ + G++D+ +RL ++M +G + +
Sbjct: 302 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 361
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + + + G P + T MD + +AG ++ + F+++
Sbjct: 362 YTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 421
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +PDV Y+++I AG+ + ++F M +G + YN+++ GFC +GK
Sbjct: 422 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+A +++EM+ + P Y +V L +L EA+ + KG +++V
Sbjct: 482 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 535
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 146/284 (51%), Gaps = 9/284 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N++I C V AR+++ R + F+P SY +L L ++++ +E ++
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSS---YGFQPDTVSYTTVLKGLCAAKRWEDVEVLF 265
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M + P+ +T+++++ R G +++ +LD M G + + NI+++ + K
Sbjct: 266 CEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQ 325
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LN+M G P + +TT++ GL RAG + K +EM K C P+ V +
Sbjct: 326 GRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTF 385
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
I G +++A L + M G + TYN+++ GFC+ G+ D A ++ S
Sbjct: 386 NTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSA---LELFNS 442
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + Y TL++ L +A +L A E++ M++ +++V+
Sbjct: 443 LPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVT 486
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 133/284 (46%), Gaps = 9/284 (3%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+G P +N L+ C G + AR+++ P +Y ++ L +
Sbjct: 99 SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM------PVPPDAYTYTPLIRGLCDRGR 152
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M P ++TY +++ A + Q ++LDEM G +P+ TYN+
Sbjct: 153 VGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNV 212
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ + + D+ A +LN + GF P + +TT++ GL A + + F EM
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN 272
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P+ V + +++ + G +E+A ++ D M G N N +I C G+ D+A
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF 332
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M S GC+P+ + Y T++ L AG+ +A E++ MV K
Sbjct: 333 EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK 376
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 104/219 (47%), Gaps = 3/219 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + G D+ YN ++ R G+LD RL+ M PD +TY L+ L
Sbjct: 92 VLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLC 148
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ AL+LL+ M PSV+ +T L++ + ++ DEM KGC P++V
Sbjct: 149 DRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIV 208
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V+I ++ A+ + + + + G P+ +Y ++++G C A ++++ + EM
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PN + ++ LV G + A EV+ M E G
Sbjct: 269 VENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHG 307
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 115/239 (48%), Gaps = 3/239 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ G +Y ++ + ++ PD TY ++ G++ LLD+M
Sbjct: 107 AYNTLVA---GYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDM 163
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R P TY +LL + K A+ +L+ M+ G P+++ + +++G+ R +
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D + + +++ G PD V YT ++ AA E + LF M+ +PN T++ +
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+R FC G + A ++ M GC N + N +++++ G++ +A E + +M G
Sbjct: 284 VRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG 342
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 137/288 (47%), Gaps = 9/288 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G NI+I + + G E + P SY +L L +
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + +M + P+ +T+N +C + G +DQ L+++M G S TYN
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNA 422
Query: 121 LLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L++ V G+ D +AL L N + +P+ + +TTL+ GL A LDA EM
Sbjct: 423 LVNGFCVQGRVD---SALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMM 476
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C +VV + V+++ + G +E+A +L M+ G PN+ T+N+++ G +
Sbjct: 477 QNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSE 536
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ + S+G + + + Y+++V L ++ EA ++ + + G
Sbjct: 537 EALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMG 584
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 117/285 (41%), Gaps = 3/285 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN IC + GL + + + + +YNA+++ G
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVN---GFCV 429
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + P+ +TY ++ +LD LL EM ++ + T+N+
Sbjct: 430 QGRVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + A+ L+ M E G P+++ F TL+DG++ N + + +KG
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D + Y+ ++ +E+A +F + G P YN ++ C + D A
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAI 609
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S C PN Y L+ L G L EA V+ + +G
Sbjct: 610 DFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRG 654
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 83/183 (45%), Gaps = 2/183 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIR 59
M++N P TFN+L+ + G + +E + P ++N +L +
Sbjct: 475 MMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCN 534
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +E ++ +S +G + D +TY+ ++ R ++++ ++ + G P YN
Sbjct: 535 SEEALELLHGLVS-KGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYN 593
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L L K + A++ HM P+ + L++GL+R G L +Y E+ ++
Sbjct: 594 KILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSR 653
Query: 180 GCM 182
G +
Sbjct: 654 GVL 656
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%)
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
IA +L +A L + ++G+ P+V+ +IR C G+ +A +++ E G +
Sbjct: 46 IARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDV 105
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHM 281
YNTLV+ G+L A +I M
Sbjct: 106 FAYNTLVAGYCRYGRLDAARRLIASM 131
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 9/127 (7%)
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
D L+ A L + ++G PDV T +I + G A + G
Sbjct: 49 DDLAEAARL------VERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAP 102
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+VF YN+++ G+C G+ D A ++ M P+ Y L+ L + G++ +A +
Sbjct: 103 VDVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGLCDRGRVGDALSL 159
Query: 278 IRHMVEK 284
+ M+ +
Sbjct: 160 LDDMLRR 166
>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 608
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 41/337 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALLGIR 59
M + G T TFN LI G G + ++ + S + +P +YN ++ A +
Sbjct: 154 MKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKK 213
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ V +M G PD++TYNI+ A + G+ + L+ EM +P+ T
Sbjct: 214 NIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNERTCG 273
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGF--------------------------------- 146
I+++ K + AL + MKE+G
Sbjct: 274 IIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEY 333
Query: 147 --DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
P V+ F+T+M+ S AG +D C+ F++MA G PD+ ++++ Y+ AGE E A
Sbjct: 334 GVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVRAGETENA 393
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ + M G PNV ++I G+C AGK + A + ++M G +PN + TL+
Sbjct: 394 ESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKTFETLIWG 453
Query: 265 LRNAGKLAEAHEVIRHMVEKGKY-----IHLVSKFKR 296
A + +A E+++ M EKG + I LV+ R
Sbjct: 454 YAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWR 490
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 1/245 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +Y ++ AL ++ ++ I + ++ + G PD + YN ++ A G + + +
Sbjct: 90 RPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKEAMK 149
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGL 160
+ +M +G P T+N L+ G KP L +L+ M G P+ + L+
Sbjct: 150 IFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILVRAW 209
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
N++ +M G PDVV Y ++ +Y GE +A+DL M + PN
Sbjct: 210 CSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVAPNE 269
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T ++ G+C G EA + M+ G +PN +++N+L+ + E +
Sbjct: 270 RTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTL 329
Query: 281 MVEKG 285
M E G
Sbjct: 330 MEEYG 334
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 114/247 (46%), Gaps = 1/247 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+S +++ L+G + ++ + ++G+ P ++TY ++ A +L + L+ +
Sbjct: 59 HSRTKLMNILIGKGKPHEANLIFDNLVEDGHRPTLITYTTLVAALTKLKHFESIFLLISK 118
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ +G PD YN +++ + A+ + MK+ G P+ F TL+ G AG
Sbjct: 119 VEENGMKPDSILYNAMINAFSESGNVKEAMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGK 178
Query: 166 LDACKYFFDEMANKGCM-PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ M+ G + P+ Y +++ ++ + +E+A ++ M+ G P+V TYN
Sbjct: 179 PEEGLKMLHLMSLDGSVKPNDRTYNILVRAWCSKKNIEEAWNVLHKMVASGIQPDVVTYN 238
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ R + G+ A ++ EM+ PN +V+ G + EA + M E
Sbjct: 239 ILARAYAQKGETLRAEDLILEMQYEKVAPNERTCGIIVNGYCKEGNMIEALRFVYRMKEL 298
Query: 285 GKYIHLV 291
G + +LV
Sbjct: 299 GVHPNLV 305
>gi|242046162|ref|XP_002460952.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
gi|241924329|gb|EER97473.1| hypothetical protein SORBIDRAFT_02g038080 [Sorghum bicolor]
Length = 796
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 35/306 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G T+N LI C GL R+ + F + K F P K ++N++L R+
Sbjct: 247 MKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKARR 306
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKY----------------------------- 91
++ V ++M + G P ++TYN ++ A
Sbjct: 307 HEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTT 366
Query: 92 ------RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
R+GK+D EM R+G SP+ TYN L+ + G K + + + ++ G
Sbjct: 367 LISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAG 426
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ P V+ + TL+ + G F EM G +P+ Y +I+SY G ++A
Sbjct: 427 YVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAM 486
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+++ MI G P++ TYN+++ G++ +A + EME R C P+ L Y++L+
Sbjct: 487 EIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAY 546
Query: 266 RNAGKL 271
NA KL
Sbjct: 547 ANAKKL 552
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHR 101
P ++Y A++ +++ V+++M D G P ++TYN+V+ ++ +
Sbjct: 183 PDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVV 242
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+D M G D +TYN L+ + A + + MK GF+P + F +L+D
Sbjct: 243 LVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYG 302
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A + +M N GC P VV Y +I++Y+ G LE+A +L M +G P+V
Sbjct: 303 KARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 362
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
TY ++I G GK D A EM GC+PN YN L+ GK E
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTE 414
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 135/314 (42%), Gaps = 36/314 (11%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR-QYKLIEWVY 68
A + L+ G R V F + +P +YN +LH + +K + +
Sbjct: 185 ASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVVVLV 244
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M ++G D TYN ++ R G + ++ DEM +GF PD T+N LL V GK
Sbjct: 245 DSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVYGKA 304
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHF----------------------------------- 153
+ A+ +L M+ G PSV+ +
Sbjct: 305 RRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTY 364
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
TTL+ GL R G +DA + EM GC P++ Y +I + G+ + +FD + +
Sbjct: 365 TTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRS 424
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G +P+V T+N+++ F G E + KEM+ G P Y +L+S+ G +
Sbjct: 425 AGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQ 484
Query: 274 AHEVIRHMVEKGKY 287
A E+ + M+E G Y
Sbjct: 485 AMEIYKRMIEAGIY 498
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 130/281 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T+N ++ G + + F + + + +P + SY+++LHA ++
Sbjct: 492 MIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKK 551
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + + + P ++ ++ L + + E+ R S D + N
Sbjct: 552 LDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLDINVLNA 611
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + GK +L MKE + S + +LM SR G+ + C+ E+ + G
Sbjct: 612 MVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILTEIKSSG 671
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD Y +I +Y G++++A LF M G P++ TYN I+ + F+EA
Sbjct: 672 MRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANLMFEEAI 731
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+++ + ++GC PN YN+++ G++ EA + ++
Sbjct: 732 DLVRYLVAQGCKPNERTYNSILEGYCRHGRMVEAKSFLSNL 772
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 94/210 (44%), Gaps = 1/210 (0%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL-AAL 135
APD Y ++ R G+ + M G P TYN++LHV K P +
Sbjct: 182 APDASAYTALVSEFSRAGRFRDAVAVFRRMVDGGVQPALVTYNVVLHVYSKMSVPWKEVV 241
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L++ MKE G + + TL+ R G FDEM G PD V + ++ Y
Sbjct: 242 VLVDSMKEDGIELDRYTYNTLISCCRRRGLYREAAQMFDEMKAAGFEPDKVTFNSLLDVY 301
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A E+A + M G P+V TYNS+I + G +EA + +EME RG P+
Sbjct: 302 GKARRHEEAIGVLKKMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDV 361
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y TL+S L GK+ A MV G
Sbjct: 362 VTYTTLISGLDRIGKIDAALATYSEMVRNG 391
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 120/270 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI + GL + +E + + +P +Y ++ L I + Y +M
Sbjct: 328 TYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRIGKIDAALATYSEM 387
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +P++ TYN ++ GK + + D++ +G+ PD T+N LL V G+
Sbjct: 388 VRNGCSPNLCTYNALIKMHGVRGKFTEMMIVFDDLRSAGYVPDVVTWNTLLAVFGQNGLD 447
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ MK+ G+ P + +L+ SR G D + M G PD+ Y +
Sbjct: 448 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAV 507
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+++ G +A+ LF M + P+ +Y+S++ + A K D+ + +++ ++
Sbjct: 508 LSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHAYANAKKLDKMKALSEDIYAQRI 567
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ + TLV L+E + + +
Sbjct: 568 EPHNWLVKTLVLVNNKVNSLSETEKAFQEL 597
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 131/316 (41%), Gaps = 35/316 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G+ T+N L+ G+ GL +V F + K + P +++Y +++ + +
Sbjct: 426 GYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQA 485
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y++M + G PDI TYN V+ A R G+ Q +L EM PD +Y+ LLH
Sbjct: 486 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSSLLHA 545
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K L + +P TL+ ++ +L + F E+ + C D
Sbjct: 546 YANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRRCSLD 605
Query: 185 VVCYTVMITSY-----------------------IAA------------GELEKAQDLFD 209
+ M++ Y AA G+ EK + +
Sbjct: 606 INVLNAMVSIYGKNKMVKKVEEVLTLMKENSINHSAATYNSLMHMYSRLGDCEKCEAILT 665
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ + G P+ ++YN++I + G+ EA + EM+ G P+ + YN + +
Sbjct: 666 EIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANL 725
Query: 270 KLAEAHEVIRHMVEKG 285
EA +++R++V +G
Sbjct: 726 MFEEAIDLVRYLVAQG 741
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 121/273 (44%), Gaps = 2/273 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR-QYKLIEWVYQQ 70
T+ LI +G + + + P +YNA++ + G+R ++ + V+
Sbjct: 363 TYTTLISGLDRIGKIDAALATYSEMVRNGCSPNLCTYNALIK-MHGVRGKFTEMMIVFDD 421
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
+ GY PD++T+N ++ + G + + EM ++G+ P+ TY L+ +
Sbjct: 422 LRSAGYVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 481
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+ + M E G P + + ++ L+R G + F EM ++ C PD + Y+
Sbjct: 482 FDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWVQAEKLFAEMEDRDCKPDELSYSS 541
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ +Y A +L+K + L + + + P+ + +++ E +E+ R
Sbjct: 542 LLHAYANAKKLDKMKALSEDIYAQRIEPHNWLVKTLVLVNNKVNSLSETEKAFQELRRRR 601
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
C+ + V N +VS + + EV+ M E
Sbjct: 602 CSLDINVLNAMVSIYGKNKMVKKVEEVLTLMKE 634
>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
Length = 791
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +M D G PD++TYN ++ A + +D+ +L+ M ++G PD TYN +LH
Sbjct: 218 TYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 277
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+P A+ L M+ G +P V+ ++ LMD L + G + FD M +G P++
Sbjct: 278 SSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEIT 337
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ Y G L + L D M+ G P+ + ++ +I + GK D+A + +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G NPN + Y ++ L +G++ +A M+++G
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 115/224 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ +M +G P+ +TY V+ + G+++ ++M G SP YN L+H L
Sbjct: 393 VFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLC 452
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+K A L+ M + G + + F +++D + G + + F+ M G P+V+
Sbjct: 453 TCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVI 512
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y AG++++A L GM++ G PN TY+++I G+C + ++A + KEM
Sbjct: 513 TYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 572
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
ES G +P+ + YN ++ L + A A E+ + E G I L
Sbjct: 573 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIEL 616
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+++L +C G ARK+ + K L +P +Y +L
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGL---KPEITTYGTLLQGYAT 348
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD ++I++CA GK+DQ + +M + G +P+ T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ +L K + A+ M + G P + + +L+ GL + + EM
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G + + + +I S+ G + +++ LF+ M+ G PNV TYN++I G+C+AGK D
Sbjct: 469 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMD 528
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ M S G PN + Y+TL++ ++ +A + + M G
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 117/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+I+ AL + V M G PD +TYN ++ G+ +
Sbjct: 229 PDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGF 288
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TY++L+ L K + + A + + M + G P + + TL+ G +
Sbjct: 289 LKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYAT 348
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G PD ++++I +Y G++++A +F M +G PN T
Sbjct: 349 KGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVT 408
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G+ ++A ++M G +P +VYN+L+ L K A E+I M+
Sbjct: 409 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 468
Query: 283 EKG 285
++G
Sbjct: 469 DRG 471
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 42/260 (16%)
Query: 68 YQQMSDEG---YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS------------ 112
Y +M+ G PD+ TY I++ R G+LD L + + GF
Sbjct: 72 YNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKG 131
Query: 113 ------------------------PDFHTYNILLHVLGKGDKPLAALNLLNHMKEV---G 145
P+ +YNILL L ++ AL LL+ M + G
Sbjct: 132 LCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGG 191
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P V+ +TT+++G + G+ D + EM ++G +PDVV Y +I + A ++KA
Sbjct: 192 SPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAM 251
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ + M+ G +P+ TYNS++ G+C +G+ EA +K+M S G P+ + Y+ L+ L
Sbjct: 252 EVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYL 311
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+ EA ++ M ++G
Sbjct: 312 CKNGRCMEARKIFDSMTKRG 331
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 132/291 (45%), Gaps = 8/291 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ GF A F L+ C A +V R + P SYN +L L
Sbjct: 113 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE--LGCIPNVFSYNILLKGLCD 170
Query: 58 I-RQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
R + +E ++ D G PD+++Y V+ ++ G D+ + EM G PD
Sbjct: 171 ENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPD 230
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN ++ L K A+ +LN M + G P + + +++ G +G F
Sbjct: 231 VVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLK 290
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M + G PDVV Y++++ G +A+ +FD M +G P + TY ++++G+ G
Sbjct: 291 KMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKG 350
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E ++ M G +P+ V++ L+ N GK+ +A V M ++G
Sbjct: 351 ALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG 401
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 132/323 (40%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G A T+ +I C G V A E+ I L P YN+++H L
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL---SPGNIVYNSLIHGLCT 453
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D G + + +N ++ + + G++ + +L + M R G P+ T
Sbjct: 454 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVIT 513
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ K A+ LL+ M VG P+ + ++TL++G + ++ F EM
Sbjct: 514 YNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEME 573
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC------ 231
+ G PD++ Y +++ A++L+ + G + TYN ++ G C
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Query: 232 -----------------------------MAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
G+ DEA + S G PN+ Y +
Sbjct: 634 DALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 693
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
N+ G L E ++ M + G
Sbjct: 694 ENIIGQGLLEELDQLFLSMEDNG 716
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ E ++ +P +YN +++
Sbjct: 467 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR---IGVKPNVITYNTLINGYCL 523
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G P+ +TY+ ++ ++ +++ L EM SG SPD T
Sbjct: 524 AGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 584 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLC 643
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +PN +TY M G +
Sbjct: 644 LMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 703
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + ME GC + + N +V L G++ A + + EK
Sbjct: 704 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 750
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 8/191 (4%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD---PSVLHFTTLMD 158
+ DE+ R G + N L + + D P AA++ N M G D P + + L+
Sbjct: 37 VFDELLRRGRGASIYGLNRALADVAR-DSPAAAVSRYNRMARAGADEVTPDLCTYGILIG 95
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK-GQL 217
RAG LD + KG D + +T ++ A A D+ +T+ G +
Sbjct: 96 CCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTELGCI 155
Query: 218 PNVFTYNSMIRGFCMAGKFDEACT---MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PNVF+YN +++G C + EA MM + G P+ + Y T+++ G +A
Sbjct: 156 PNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKA 215
Query: 275 HEVIRHMVEKG 285
+ M+++G
Sbjct: 216 YSTYHEMLDRG 226
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 120/231 (51%)
Query: 51 ILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
+L+ L + + E V Q + + G P + YN ++ + G+L+ +M
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 220
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD TYN L++ L K ++ A +LL M++ G +P+V F TL+D R G L+ C
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
EM G P+VV Y ++ ++ G++ +A + D M K LPN YN++I +
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G D+A ++++M+S G +P+ + YN L+ L N +++EA E+I +
Sbjct: 341 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSL 391
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P A ++N++I G VE F + P +YN ++ + +
Sbjct: 12 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ QM G P+ +TYN+++ R G++ + LLDEM PD TY+IL L
Sbjct: 72 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A L+L + G + L++GL + G + + + N G +P V
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y GELE A F M ++ P+ TYN++I G C A + A ++ EM
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G NP +NTL+ G+L + V+ M E G ++VS
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVS 297
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 140/287 (48%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++NG T +IL+ C G+V +A +V++ + + L P + YN +++
Sbjct: 147 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV---PTRVIYNTLINGYCQT 203
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + QM PD +TYN ++ + ++ LL EM +G +P T+
Sbjct: 204 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 263
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G+ + +L+ M+E G P+V+ + ++++ + G + D+M +
Sbjct: 264 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 323
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +P+ Y +I +Y+ G ++A L + M + G P++ TYN +I+G C + E
Sbjct: 324 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 383
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ + + P+ + YNTL+S G + +A ++ + M + G
Sbjct: 384 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 430
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G T +N LI + G F + K + +P +YNA+++ L +
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D G P + T+N ++ A R G+L++ +L EM +G P+ +Y
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K K A+ +L+ M P+ + ++D G D ++M + G
Sbjct: 301 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P +V Y ++I ++ +A+++ + + +P+ +YN++I C G D+A
Sbjct: 361 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 420
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ + M G Y+ L+S L AG+L E + + M++
Sbjct: 421 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQ 463
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 74/205 (36%), Gaps = 35/205 (17%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A+ +N +I E G + K K P +YN ++ L Q E +
Sbjct: 330 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 389
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+S+ PD ++YN ++ A G +D+ L M + G TY+
Sbjct: 390 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYH---------- 439
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
L+ GL AG L+ +Y + +M +P +
Sbjct: 440 -------------------------QLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHN 474
Query: 190 VMITSYIAAGELEKAQDLFDGMITK 214
+M+ +Y G KA+DL M+ K
Sbjct: 475 IMVEAYSKYGNEIKAEDLRKEMLQK 499
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 146/279 (52%), Gaps = 6/279 (2%)
Query: 11 RTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALL--GIRQYKLIEWV 67
+ F ++ G+ L K V F + + F + S+N++L+ ++ G+ Y+ +E+
Sbjct: 96 KCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLF-YRALEFY 154
Query: 68 YQQMSDEGY--APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ +G +P++LT+N+V+ ++G +D ++ +M S PD +TY L+ L
Sbjct: 155 NHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGL 214
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K D+ A++LL+ M+ G PS + F L++GL + G+L D M KGC P+
Sbjct: 215 CKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNE 274
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I G+LEKA L D M++ +PNV TY ++I G G+ + ++
Sbjct: 275 VTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLAL 334
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
ME RG + N VY+ L+S L GK EA ++ + M K
Sbjct: 335 MEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVK 373
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 132/284 (46%), Gaps = 7/284 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I+ FP+ TFN+LI C G++ K+V+ L P + +YN ++H L
Sbjct: 232 IDGCFPSPV-TFNVLINGLCKKGDLARVAKLVDNMF---LKGCAPNEVTYNTLIHGLCLK 287
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + + +M P+++TY ++ + G+ R+L M G+ + + Y
Sbjct: 288 GKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVY 347
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L+ L K K A+ L M + + + ++ ++DGL R G D EM N
Sbjct: 348 SALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTN 407
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
C P+ Y+ ++ + AG KA +++ M N Y+ +I G C GK E
Sbjct: 408 NRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKE 467
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
A + +M +GC P+ + Y ++++ L NAG + +A ++ M+
Sbjct: 468 AMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEML 511
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 3/276 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T ++FN ++ + GL + +E + I +K N P ++N ++ + +
Sbjct: 130 TVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAV 189
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+++ M PD+ TY +M + ++D+ LLDEM G P T+N+L++ L
Sbjct: 190 QMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGL 249
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K L+++M G P+ + + TL+ GL G L+ D M + C+P+V
Sbjct: 250 CKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNV 309
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I + G + M +G N + Y+++I G GK EA + KE
Sbjct: 310 VTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKE 369
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
M + C N +VY+ ++ L GK EA EV+ M
Sbjct: 370 MTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEM 405
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN++I T +VGL V+ F + +P +Y ++ L + + +M
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G P +T+N+++ + G L + +L+D M G +P+ TYN L+H L K
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYF------------------ 172
A++LL+ M P+V+ + T+++GL + G LD +
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSAL 350
Query: 173 ----------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
F EM K C + + Y+ +I G+ ++A ++ M
Sbjct: 351 ISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
PN +TY+S+++GF AG +A M K+M N + Y+ L+ L GK+ EA
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 470
Query: 277 VIRHMVEKG 285
V M+ KG
Sbjct: 471 VWAQMLGKG 479
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 104/221 (47%), Gaps = 2/221 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y+A++ L + + ++++M+ + + + Y+ V+ R GK D+ +L EM
Sbjct: 347 YSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMT 406
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ P+ +TY+ L+ + A+ + M + F + + ++ L+ GL + G +
Sbjct: 407 NNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 466
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK--GQLPNVFTYNS 225
+ +M KGC PDVV Y MI AG +E A L++ M+ + P+V TYN
Sbjct: 467 EAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNI 526
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
++ C A ++ M RGC+P+ + + LR
Sbjct: 527 LLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLR 567
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M N A T++ L+ E G K +E + NF + Y+ ++H L +
Sbjct: 405 MTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGK 464
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFHTY 118
K V+ QM +G PD++ Y ++ G ++ +L +EM PD TY
Sbjct: 465 VKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTY 524
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
NILL+ L K A++LLN M + G DP ++
Sbjct: 525 NILLNALCKQSSISRAIDLLNSMLDRGCDPDLV 557
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 134/258 (51%), Gaps = 3/258 (1%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F + + + F+ NS N +L AL+ + +++VY++M P++ T+NI +
Sbjct: 151 EVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGL 210
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFD 147
+ GKL++ +++++ GFSP+ TYN L+ G K A +L M
Sbjct: 211 CKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKIC 270
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P+ + F TL+DG + N+ A K F+EM +G P++V Y +I G+L++A L
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+D M+ G PN+ T+N++I GFC EA + ++ + PN + +NT++
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCK 390
Query: 268 AGKLAEAHEVIRHMVEKG 285
AG + E + M+++G
Sbjct: 391 AGMMEEGFALHNSMLDEG 408
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 138/283 (48%), Gaps = 9/283 (3%)
Query: 5 GFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF + + N L+ E G + V + IK ++ +P ++N ++ L +
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRI---QPNLTTFNIFINGLCKAGKL 216
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
E V + + G++P+I+TYN ++ C K GK+ + +L EM + P+ T+
Sbjct: 217 NKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITF 276
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ K + LAA N M+ G P+++ + +L++GLS G LD +D+M
Sbjct: 277 NTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVG 336
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G P++V + +I + +++A+ LFD + + +PN T+N+MI FC AG +E
Sbjct: 337 LGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEE 396
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ M G PN YN L++ L + A +++ M
Sbjct: 397 GFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ N TFN LI C V A+ E + L +P +YN++++ L
Sbjct: 264 MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGL---KPNIVTYNSLINGLSN 320
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +M G P+I+T+N ++ + + + +L D++ P+ T
Sbjct: 321 NGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAIT 380
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ K L N M + G P+V + L+ GL R N+ A K +EM
Sbjct: 381 FNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEME 440
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N DVV Y ++I + GE KA+ L M+ G PN TYN+++ G+CM G
Sbjct: 441 NYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLK 500
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + +ME G N + YN L+ GKL +A+ ++ M+EKG
Sbjct: 501 AALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKG 548
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 120/261 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N LI G + + + K +P ++NA+++ +
Sbjct: 299 MQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKM 358
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K ++ ++++ P+ +T+N ++ A + G +++ L + M G P+ TYN
Sbjct: 359 IKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNC 418
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + AA LLN M+ V+ + L+ G + G + EM N G
Sbjct: 419 LIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVG 478
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V Y ++ Y G L+ A + M +G+ NV TYN +I+GFC GK ++A
Sbjct: 479 VKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDAN 538
Query: 241 TMMKEMESRGCNPNFLVYNTL 261
++ EM +G NPN Y+ +
Sbjct: 539 RLLNEMLEKGLNPNRTTYDVV 559
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 38/198 (19%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
+A + +++ GF S+ L+ L + +Y + EM + P++ + + I
Sbjct: 148 SACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFI 207
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC---MAGKFDEACTMMK----- 244
AG+L KA+D+ + + G PN+ TYN++I G C AGK A ++K
Sbjct: 208 NGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLAN 267
Query: 245 ------------------------------EMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
EM+ +G PN + YN+L++ L N GKL EA
Sbjct: 268 KICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEA 327
Query: 275 HEVIRHMVEKGKYIHLVS 292
+ MV G ++V+
Sbjct: 328 IALWDKMVGLGLKPNIVT 345
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 6/200 (3%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E A TFN +I C G + + + +F P ++YN ++ L +
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIF---PNVSTYNCLIAGLCRNQ 427
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + +M + D++TYNI++ + G+ + +LL EM G P+ TYN
Sbjct: 428 NVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYN 487
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ AAL + M++ G +V+ + L+ G + G L+ +EM K
Sbjct: 488 TLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK 547
Query: 180 GCMPDVVCYTVMITSYIAAG 199
G P+ Y V+ + G
Sbjct: 548 GLNPNRTTYDVVRLEMLEKG 567
>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 740
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 41/308 (13%)
Query: 21 GEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
G GL + + + +++ P SYN +L LL K++ V+ +M +G +P
Sbjct: 175 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 234
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK------------ 127
+ T+ +VM A + ++D LL +M R G P+ Y L+H L K
Sbjct: 235 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLE 294
Query: 128 -----GDKPLA------------------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
G P A L++ M GF P+ + LM GL R G
Sbjct: 295 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 354
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-DGMITKGQLPNVFTY 223
+D + +++ N P+VV + +I Y++ G L++A+ + + M++ G P++FTY
Sbjct: 355 KVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 410
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I G C G A +M EM+ +GC PN + Y L+ G+L EA V+ M
Sbjct: 411 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 470
Query: 284 KGKYIHLV 291
KG ++ V
Sbjct: 471 KGLALNAV 478
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 153/324 (47%), Gaps = 32/324 (9%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSY--------- 48
M+ GF + T+ +L +C G+V AR ++ + + F N Y
Sbjct: 331 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEA 390
Query: 49 NAILHA-----------------LLGI-RQYKLIEW--VYQQMSDEGYAPDILTYNIVMC 88
A++H +LG+ ++ L+ + +M +G P+++TY I++
Sbjct: 391 KAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 450
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+ G+L++ +LDEM G + + YN L+ L K +K ALN+ M G P
Sbjct: 451 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 510
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ F +L+ GL + + + +M +G + + + Y +I +++ G +++A L
Sbjct: 511 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 570
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M+ +G + TYN +I+ C AG ++ + ++M S+G NPN + N L++ L
Sbjct: 571 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 630
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
G + A E +R M+ +G +V+
Sbjct: 631 GNIQHALEFLRDMIHRGLTPDIVT 654
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ ILI C G + AR V++ + K YN ++ AL + + ++
Sbjct: 444 TYTILIDRFCKEGRLEEARNVLDE-MSGKGLALNAV--GYNCLISALCKDEKVQDALNMF 500
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS +G PDI T+N ++ ++ K ++ L +M G + TYN L+H +
Sbjct: 501 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 560
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL L+N M G + + L+ L RAGN++ F++M +KG P+ +
Sbjct: 561 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 620
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I G ++ A + MI +G P++ TYNS+I G C G+ EA + +++
Sbjct: 621 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 680
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + YNTL+S G +AH ++ V+ G
Sbjct: 681 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 717
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P ++N+++ L + +++ +YQ M EG + +TYN ++ A R G + + +
Sbjct: 509 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 568
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+++M G D TYN L+ L + L L M G +P+ + L++GL
Sbjct: 569 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 628
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R GN+ F +M ++G PD+V Y +I G ++A +LFD + +G P+
Sbjct: 629 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAI 688
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
TYN++I C G FD+A ++ G PN + + LVSN G
Sbjct: 689 TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 736
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 1/234 (0%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+ Y ++ L ++K + + QM EG + ++M R G Q RLL +
Sbjct: 130 DVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLD 189
Query: 106 M-GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
M G P F +YN++L VL G+ P N+ M G P+V F +M L
Sbjct: 190 MRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVN 249
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D+ +M GC+P+ + Y +I + G + + L + M+ G +P+V T+N
Sbjct: 250 EVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFN 309
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
I G C + EA ++ M RG PN Y L+ L GK+ EA ++
Sbjct: 310 DAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIR 59
M+ G T+N LI G ++ + + + LF P + +YN ++ AL
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEAL-KLVNDMLFRGCPLDDITYNGLIKALCRAG 596
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +++ M +G P+ ++ NI++ R G + L +M G +PD TYN
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 656
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L++ L K + ALNL + ++ G P + + TL+ + G D +
Sbjct: 657 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 716
Query: 180 GCMPDVVCYTVMITSYIAAGELE 202
G +P+ V + ++++++I G+ E
Sbjct: 717 GFIPNEVTWYILVSNFIKEGDQE 739
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 139/321 (43%), Gaps = 37/321 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ N ++N LI +G K F + + P +YN +L L +
Sbjct: 365 MLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGE 424
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + +M +EG APDI+TY I++ ++G L DEM G D + Y
Sbjct: 425 LEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYAT 484
Query: 121 -LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC---------- 169
++ L GD A +L M GF P ++ + ++DGL + GNL+
Sbjct: 485 RIVGELKLGDTS-RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD 543
Query: 170 -------------------------KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
+ F EM +KG P VV YTV+I + G LE+A
Sbjct: 544 GVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERA 603
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
F M KG LPNV TYNS+I G C + D+A EM +G PN Y L++
Sbjct: 604 FIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINE 663
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
N G EA + + M+++G
Sbjct: 664 NCNMGNWQEALSLYKQMLDRG 684
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 139/277 (50%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N+LI GE A+ ++ +K+ L + +YN +++ +
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGL---KVSAYTYNPLIYGYFNKGMLAEALSLQ 327
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M +G +P + TYN + +LG++ + L +M + PD +YN L++ +
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L + ++ + P+++ + TL+DGL R G L+ + EM N+G PD+V Y
Sbjct: 388 GNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTY 447
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T+++ G L AQ+ FD M+ +G + + Y + I G G A ++ +EM +
Sbjct: 448 TILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA 507
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ ++YN +V L G L EA E+++ MV G
Sbjct: 508 KGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDG 544
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 10/280 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T+ IL+ C G + +A++ + + L + + + LG
Sbjct: 435 MINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL-ELDSYAYATRIVGELKLG 493
Query: 58 --IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R + L E +M +G+ PD++ YN+V+ +LG L++ LL +M G PD+
Sbjct: 494 DTSRAFSLQE----EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDY 549
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY ++H + + + M G PSV+ +T L+ G + G L+ +F E
Sbjct: 550 VTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M KG +P+V+ Y +I +++A + F M+ KG PN ++Y +I C G
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGN 669
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ EA ++ K+M RG P+ ++ L+ L KL H
Sbjct: 670 WQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVH 709
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G +A T+N LI G+ + + + L P +YN+ ++ L + +
Sbjct: 295 MLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGR 354
Query: 61 YKLIEWVYQQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ QQ+SD PD+++YN ++ RLG L + L DE+ P T
Sbjct: 355 ---MSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVT 411
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL L + + A L M G P ++ +T L++G + G+L + FFDEM
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G D Y I + G+ +A L + M+ KG P++ YN ++ G C G +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++++M S G P+++ Y +++ G+L + E+ M+ KG
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKG 579
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 118/257 (45%), Gaps = 3/257 (1%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMC 88
V ++ IKS+L P + N IL L VY+ M + G P I+TYN ++
Sbjct: 186 VFDKMIKSRL---SPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLD 242
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+ + GK+ Q LL EM R G +P+ TYN+L++ L K + A L+ M + G
Sbjct: 243 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 302
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
S + L+ G G L +EM KG P V Y I G + A
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQL 362
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ LP+V +YN++I G+C G +A + E+ S P + YNTL+ L
Sbjct: 363 SDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQ 422
Query: 269 GKLAEAHEVIRHMVEKG 285
G+L A ++ M+ +G
Sbjct: 423 GELEVAQQLKVEMINEG 439
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 97/197 (49%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
++Q + D+M +S SPD N +L +L D A+ + M E G P+++ + T
Sbjct: 180 VEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNT 239
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+D + G + EM +GC P+ V Y V+I GE E+A+ L M+ G
Sbjct: 240 LLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTG 299
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ +TYN +I G+ G EA ++ +EM +G +P YN+ + L G++++A
Sbjct: 300 LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAM 359
Query: 276 EVIRHMVEKGKYIHLVS 292
+ + M+ +VS
Sbjct: 360 QQLSDMLANNLLPDVVS 376
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 5/212 (2%)
Query: 79 DILTYNIVMCAKYRLGKL---DQFHRLLDEMGRSGFSPDFHT--YNILLHVLGKGDKPLA 133
+IL N +M + Y + + HR++D + S + ++L+ V K
Sbjct: 123 EILAQNNLMRSAYWVMERVINANMHRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQ 182
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
L++ + M + P V + ++ L + + M G P +V Y ++
Sbjct: 183 CLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLD 242
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
SY G++++ DL M +G PN TYN +I G G+F++A ++ EM G
Sbjct: 243 SYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKV 302
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YN L+ N G LAEA + MV KG
Sbjct: 303 SAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 2/284 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
I + + ++ + L+ + + ++ F ++ F+P ++ +L++L R
Sbjct: 119 IHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 178
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ VY++M G P+I +N+++ A + G +++ +LL+EM PD TYN L
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + K AL + + M+ G P ++ + +L+ G R G + F E+ G
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGA 296
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ V YT +I Y +LE+A L + M +G P V TYNS++R C GK +A
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM R P+ + NTL++ G + A +V + M+E G
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 30/271 (11%)
Query: 32 RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-------------- 77
++++S L + ++S+ I H L +Q+K + + ++++ Y
Sbjct: 63 KWVESNLNHKHSLQSSWTMI-HTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHD 121
Query: 78 -PD----ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
PD IL++ ++ A R+ + D ++ + M GF P H +LL+ L K
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQ-DAI-QVFEHMRVHGFKPHLHACTVLLNSLAKARLTN 179
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
+ M VG P++ F L+ ++G+++ + +EM ++ PD+ Y +I
Sbjct: 180 MVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 239
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ Y G +A + D M G P++ TYNS+I GFC G+ EA + +E+ G
Sbjct: 240 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GAT 297
Query: 253 PNFLVYNTL------VSNLRNAGKLAEAHEV 277
PN + Y TL V++L A +L E EV
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEV 328
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 2/282 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+GF +L+ + + L V + + K P + +N ++HA +
Sbjct: 156 HGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEK 215
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
E + +M PD+ TYN ++ + G + + D M R G SPD TYN L++
Sbjct: 216 AEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIY 275
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + AL L + G P+ + +TTL+DG R +L+ + M +G P
Sbjct: 276 GFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHP 333
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
VV Y ++ G+++ A L + M + P+ T N++I +C G A +
Sbjct: 334 GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVK 393
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K+M G P+ + L+ ++ A E + M++ G
Sbjct: 394 KKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M EG P ++TYN ++ GK+ +RLL+EM PD T N L++ K
Sbjct: 326 MEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGD 385
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+A+ + M E G P F L+ G + +D+ K F EM + G P Y+
Sbjct: 386 MGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSW 445
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ SY E L D + KG ++ Y ++IR C K + A + M+ +G
Sbjct: 446 LVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKG 505
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ +VY +L AGK A +++ M ++ I L
Sbjct: 506 MKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITL 545
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +YN+IL L + K + +MS+ PD +T N ++ A ++G +
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAM 390
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++ +M +G PD T+ L+H K + +A L M + GF PS ++ L+D
Sbjct: 391 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 450
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
N +A DE++ KG D+ Y +I ++E A+ +F M KG +
Sbjct: 451 YDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDS 510
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK---LAEAHEV 277
Y S+ + AGK A M+ EM+ R +Y ++ G L H +
Sbjct: 511 VVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVI 570
Query: 278 IRHMVEKG--KYIH 289
R ++ K KYI
Sbjct: 571 ERRLISKNILKYIQ 584
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 6/193 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T N LI C G++G A KV ++ +++ L +P + ++ A++H + + +
Sbjct: 372 TCNTLINAYCKIGDMGSAMKVKKKMLEAGL---KPDQFTFKALIHGFCKLHEVDSAKEFL 428
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M D G++P TY+ ++ + Y + RL DE+ R G D Y L+ L K
Sbjct: 429 FEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKI 488
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK +A + M+ G + +T+L +AG A DEM + M + Y
Sbjct: 489 DKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
Query: 189 TVMITSYIAAGEL 201
SY G +
Sbjct: 549 RCFSASYAGDGSI 561
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G+ TF+ LI C G V A ++V+R ++ +P + NA+++ L
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE---MGHKPTLITLNALVNGLCL 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M + G+ P+ +TY V+ + G+ LL +M D
Sbjct: 190 NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+I++ L K A NL N M+ GF ++ +TTL+ G AG D +M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PDVV ++ +I ++ G+L +A++L MI +G P+ TY S+I GFC + D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M+ M S+GC PN +N L++ A + + E+ R M +G
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 15/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E GF T+ ++ C G+ LA RK+ ER IK Y+ I+
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK-------YSIIID 255
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L ++ +M +G+ DI+ Y ++ G+ D +LL +M + +P
Sbjct: 256 GLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D ++ L+ K K A L M + G P + +T+L+DG + LD +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC P++ + ++I Y A ++ +LF M +G + + TYN++I+GFC
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
GK + A + +EM SR P+ + Y L+ L + G+ +A E+ +EK K
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEK-IEKSK 487
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF + LI C G K++ IK K+ P +++A++ + +
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI---TPDVVAFSALIDCFVKEGKL 333
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ E ++++M G +PD +TY ++ + +LD+ + +LD M G P+ T+NIL
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K + L L M G + + TL+ G G L+ K F EM ++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y +++ GE EKA ++F+ + ++ YN +I G C A K D+A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +G P+ YN ++ L G L+EA + R M E G
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 145/318 (45%), Gaps = 26/318 (8%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G RTFNILI + L +E F K L +YN ++ + +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + ++Q+M PDI++Y I++ G+ ++ + +++ +S D YNI
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H + K A +L + G P V + ++ GL + G+L F +M G
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG 557
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDG----------------------MITKGQLP 218
P+ Y ++I +++ G+ K+ L + M+ G P
Sbjct: 558 HSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEP 617
Query: 219 NVFTYNSMIRGFCM---AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+VFT+ +++R FC+ A +D A T+ K M++ G PN + YNT++ L N +++
Sbjct: 618 DVFTFTTLLRPFCLEENASVYD-APTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVP 676
Query: 276 EVIRHMVEKGKYIHLVSK 293
V+ M E+G + V+K
Sbjct: 677 GVLDQMFERGCQPNAVTK 694
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 116/243 (47%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP ++ + + +QY L+ + +QM +G A ++ T +I++ R KL
Sbjct: 69 RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFS 128
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ ++ + G+ PD T++ L++ L + AL L++ M E+G P+++ L++GL
Sbjct: 129 AMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLC 188
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G + D M G P+ V Y ++ +G+ A +L M + +
Sbjct: 189 LNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAV 248
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
Y+ +I G C G D A + EME +G + ++Y TL+ AG+ + +++R M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 282 VEK 284
+++
Sbjct: 309 IKR 311
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 120/270 (44%), Gaps = 24/270 (8%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C GE A ++ E+ KSK+ YN I+H + + ++ + +G
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKM---ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGV 523
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV-LGKGDKPLAAL 135
PD+ TYNI++ + G L + L +M G SP+ TYNIL+ LG+GD +A
Sbjct: 524 KPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA- 582
Query: 136 NLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
L+ +K GF D S L F + L+R M G PDV +T ++
Sbjct: 583 KLIEEIKRCGFSVDASTLRFA--LSTLAR-------------MLKAGHEPDVFTFTTLLR 627
Query: 194 SYIAA--GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + A LF M G PNV TYN++I+G + ++ +M RGC
Sbjct: 628 PFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGC 687
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
PN + +T +S L A ++R M
Sbjct: 688 QPNAVTKSTFISGLCKQDLHGSAILLLRKM 717
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 45 KNSYNAILHA-LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
K SY L + ++ I++ ++ ++Q+M+ P ++ ++ + R + D L
Sbjct: 37 KVSYRERLRSGIVDIKEDDAVD-LFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLC 95
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+M G + + +T +I+++ + K A + + + ++G++P + F+TL++GL
Sbjct: 96 KQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLE 155
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + D M G P ++ ++ G++ A L D M+ G PN TY
Sbjct: 156 GRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTY 215
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++ C +G+ A ++++ME R + + Y+ ++ L G L A + M
Sbjct: 216 GPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEI 275
Query: 284 KG 285
KG
Sbjct: 276 KG 277
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 120/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++ L D M KG P+ TY ++I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K+M + + Y L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVG 382
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVI 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM + G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 75/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 269 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM N G PD
Sbjct: 329 KEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDAR 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 146/306 (47%), Gaps = 25/306 (8%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNS-----------YNAILHA 54
T F + TC RKV+E +K K F + ++ S +N ++H
Sbjct: 92 TKEHKFRVPFDTC------RKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHN 145
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ +L + V+ ++ G P ++++N +M ++G LD+ RL M SG PD
Sbjct: 146 FCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPD 205
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
+T+++L++ L K K A L + M + G P+ + FTTL+DG + G +D +
Sbjct: 206 VYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYR 265
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
+M ++ +PD++ Y +I G+L++ DL D M KG P+ TY ++I G C G
Sbjct: 266 QMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEG 325
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYI 288
+ A K M + Y L+S L G+ +A +++R M+ E G Y
Sbjct: 326 DLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYT 385
Query: 289 HLVSKF 294
++++F
Sbjct: 386 MIINEF 391
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 133/273 (48%), Gaps = 2/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ LI E G R +E + +K FR PF I H L+ ++ +KL+ Y++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEH-LMKLKYFKLVWGFYEES 127
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ GY + +NI+M + G++ + D + + G P ++N L++ K
Sbjct: 128 LECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDL 187
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L + M+ G P V + L++GL + +D FDEM B G +P+ V +T +
Sbjct: 188 DEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTL 247
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + G ++ A +++ M+++ LP++ TYN++I G C G + ++ EM +G
Sbjct: 248 IDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGL 307
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL+ G L A E + M+++
Sbjct: 308 KPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 133/287 (46%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ + I
Sbjct: 128 LECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITK---WGLRPSVVSFNTLMNGYIKI 184
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ M G PD+ T+++++ + K+D + L DEM +G P+ T+
Sbjct: 185 GDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGVTF 244
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 245 TTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSM 304
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I G+LE A + MI + + Y ++I G C G+ +
Sbjct: 305 KGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVD 364
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM S G P Y +++ G + ++++ M G
Sbjct: 365 AEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXG 411
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q L+DEM G PD TY L+
Sbjct: 263 IYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + +T L+ GL + G + EM + G P++
Sbjct: 323 KEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ L M G PN T
Sbjct: 383 TYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 78/189 (41%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++NG TF LI C G V LA ++ + + L P +YN +++ L
Sbjct: 232 MLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLL---PDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + +MS +G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + + A +L M VG P + +T +++ + G++ EM
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQ 408
Query: 178 NKGCMPDVV 186
G P+ V
Sbjct: 409 RXGYXPNXV 417
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V R+ E F + P +++Y A+++ I Q + E + M G
Sbjct: 259 CRAGNV---RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVG 315
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ + +N ++ R +D+ + M + G D +TYN L L + ++ A NL
Sbjct: 316 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M E G P+ + +TTL+ G++ + F EMA G P +V Y VM+ YI
Sbjct: 376 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 435
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A+ + M KG +P++++Y +++ G C+ GK D A + +EM+ RG PN +
Sbjct: 436 KGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y L+S L G+ EA ++ +M+ G
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDG 523
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L+ ++V+ + G++ +LLDEM R G + YN LL + +L
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G +P+V +T L+DGLS A ++ + F+EM +K DV Y+ +I +Y AG
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV--- 257
+ +A ++FD + G PN TY ++I GFC G+ + A ++ +M+ RG N +V
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 258 --------------------------------YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL LR A ++ EA ++R M+EKG
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 3/207 (1%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I+ + ++M G D+ TYN + C R ++D+ LL M G P+ +Y L+
Sbjct: 340 IKMIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 396
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + A L M G +PS++ + +MDG + G++ + F +EM KG +P
Sbjct: 397 IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVP 456
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D+ Y ++ + G+++ A LF+ M +G PN+ Y ++I G G+ +EA +
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 516
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G P+ +Y+ LV +L K
Sbjct: 517 DNMLGDGLTPDDALYSALVGSLHTDKK 543
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 3/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P +A C G V AR++++ + + YN++L A + +
Sbjct: 143 PLSASVVVDGYCKSGRVAHARQLLDEMPR---HGVKVNALCYNSLLDAYTREKDDDRVAE 199
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M +EG P + TY I++ + + + +EM S D + Y+ +++
Sbjct: 200 MLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYC 259
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A + + G +P+ + L++G + G ++A + +M +G + +
Sbjct: 260 RAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQI 319
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ MI Y ++KA ++ M G +V+TYN++ G A + DEA +++ M
Sbjct: 320 VFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIM 379
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G PN + Y TL+S N G + EA + R M G LV+
Sbjct: 380 IEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 425
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 16/198 (8%)
Query: 5 GFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N L C + A+ ++ I+ + RP SY ++ + +
Sbjct: 348 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV---RPNHVSYTTLIS--IHCNEG 402
Query: 62 KLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++E ++++M+ G P ++TYN++M + G + + R +EM + G PD ++Y
Sbjct: 403 DMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYA 462
Query: 120 ILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
L+H V GK D AL L MK+ G P+++ +T L+ GL++ G + +D M
Sbjct: 463 ALVHGHCVNGKVD---VALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNM 519
Query: 177 ANKGCMPDVVCYTVMITS 194
G PD Y+ ++ S
Sbjct: 520 LGDGLTPDDALYSALVGS 537
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G ++ LI C G++ AR++ + P +YN ++ +
Sbjct: 379 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN---GAEPSLVTYNVMMDGYIK 435
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E +M +G PDI +Y ++ GK+D RL +EM + G P+
Sbjct: 436 KGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
Y L+ L K + A L ++M G P ++ L+ L
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDE 105
+Y +LHAL +Y+ ++ ++ +G P I+TYN+V+ R+G+ + LL+E
Sbjct: 182 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M +G PD T + ++ G+ A+ +K G P V+ + L+ +AGN
Sbjct: 242 MRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGN 301
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM + GC PD V Y + +Y AG E+A D M +KG LPN FTYN+
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + G+ DEA + M+ G PN YN + L + E++ M G
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQYKLIEWVY 68
R + ++ G + ++ F + + P +YN +L + +G R + I +
Sbjct: 181 RAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMG-RSWPRIVALL 239
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD T + V+ A R G LDQ +++ G P TYN LL V GK
Sbjct: 240 EEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKA 299
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL +L M++ G P + + L +RAG + D M +KG +P+ Y
Sbjct: 300 GNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTY 359
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++T+Y G +++A LFD M G +PNV TYN + +F M++EM
Sbjct: 360 NTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR 419
Query: 249 RGCNPNFLVYNTLVS 263
GC PN + +NT+++
Sbjct: 420 SGCTPNRVTWNTMLA 434
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGI 58
M +G T+N ++ CG+ G+ V K +++YN ++ A G
Sbjct: 417 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGS 476
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R Y +Y +M G+ P + TYN ++ R G ++ +M ++GF P+ +Y
Sbjct: 477 RTYAFK--MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++LL KG ++ + PS + TL+ + L+ + F E+
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 594
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G PD+V + M+ Y G KA ++FD + G P++ TYNS++ + + + E
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++K+++S P+ + YNT+++ G + EA ++ M+ G
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T + +I CG GL + V F K P +YNA+L Y V ++M
Sbjct: 253 TASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM 312
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G PD +TYN + R G ++ + LD M G P+ TYN ++ +
Sbjct: 313 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 372
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L + MK+ G+ P+V + + L + A +EM+ GC P+ V + M
Sbjct: 373 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ G + + +GM + G + TYN++I + G A M EM S G
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P YN L++ L G + A ++ M++ G
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNG 526
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK-GDKPLAALNL 137
D+ Y V+ A R G+ ++ +L E+ R G P TYN++L V G+ G + L
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M+ G +P +T++ R G LD FF+++ +G +P VV Y ++ +
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
AG +A + M G P+ TYN + + AG F+EA + M S+G PN
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+++ N G++ EA + M + G
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
MI +GF T+N L+ G+ A+ +V + +K+ F+P SY+ +L
Sbjct: 487 MISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN---GFKPNDQSYSLLLQCYAK 543
Query: 54 -------------------------------ALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
A R+ + +E +Q++ +GY PD++
Sbjct: 544 GGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVI 603
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+N ++ + G + + D + +SG SPD TYN L+ + K ++ A +L +K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
P V+ + T+++G + G + + EM G P VV Y ++ Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFN 723
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+++ + MI P TY ++ +C A ++DEA + E+ N + + + L
Sbjct: 724 EAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHMLE 783
Query: 263 SNLRNA 268
+ +++A
Sbjct: 784 ARIKDA 789
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G A T+N L T G A K ++ L P +YN ++ A
Sbjct: 312 MEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL---PNTFTYNTVMTAYAN 368
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M GY P++ TYN++ + + +L+EM RSG +P+ T
Sbjct: 369 VGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVT 428
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N +L V GK +LN MK G + S + TL+ R G+ +DEM
Sbjct: 429 WNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI 488
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P + Y ++ G+ AQ + M+ G PN +Y+ +++ + G
Sbjct: 489 SSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAA 548
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
++ KE+ P++++ TLV
Sbjct: 549 GIESIEKEVYVGTIFPSWVILRTLV 573
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 134 ALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEMA-NKGCMPDVVCYTVM 191
AL LL + G D + L ++ L R G D DEM G DV YT +
Sbjct: 129 ALALLRWASDEGAADAAALEM--VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTV 186
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK-FDEACTMMKEMESRG 250
+ + AG E+A LF + +G +P + TYN ++ + G+ + +++EM + G
Sbjct: 187 LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 246
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +T+++ G L +A + +G
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARG 281
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 141/284 (49%), Gaps = 6/284 (2%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
N TFNILI C GEV A V+ IK + P +Y +++ +++
Sbjct: 258 NNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV---EPNVVTYTSLMDGYFLVKE 314
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ +S G P++ +Y++++ + +D+ +L EM +P+ TY+
Sbjct: 315 VNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSS 374
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + +L++ + G +++ + +L++GL + +D +M ++G
Sbjct: 375 LIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ YT ++ G L+ AQ ++ ++ KG N+ Y MI G C G FDEA
Sbjct: 435 IQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEAL 494
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+++ +ME GC P+ + Y TL+S L K +A +++R M+ +
Sbjct: 495 SLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 5/256 (1%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N P +N IL +L+ + +K+ QQM +G P++ T+NI++ L +L+
Sbjct: 48 NHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFA 107
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
++ ++ + G+ PD T N LL L K ALN +H+ F + + TL++G
Sbjct: 108 FSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLING 167
Query: 160 LSRAGNLDACKYFFDEMANKGCM---PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
L ++G A ++ +G + PDV+ YT +I S+ + A DL+ MI K
Sbjct: 168 LCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKI 225
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
PNV T+NS+I GFC+ G+ EA ++ EM NPN +N L+ L G++ +A
Sbjct: 226 YPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATS 285
Query: 277 VIRHMVEKGKYIHLVS 292
V+ M+++G ++V+
Sbjct: 286 VLSVMIKQGVEPNVVT 301
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 144/273 (52%), Gaps = 10/273 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL----LGIRQYKLIEWVYQQMS 72
+C GE A +++ + L RP Y AI+ + L I Y L Y +M
Sbjct: 168 LCKSGETRAALQLLRKI--EGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDL----YSEMI 221
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ P+++T+N ++ +G+L + LL+EM + +P+ +T+NIL+ L K +
Sbjct: 222 VKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVK 281
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A ++L+ M + G +P+V+ +T+LMDG ++ K+ F+ ++ +G P+V Y+VMI
Sbjct: 282 KATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMI 341
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+++A LF M K PN TY+S+I G C +G+ + ++ E+ +RG
Sbjct: 342 NGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQP 401
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + YN+L++ L ++ +A ++ M ++G
Sbjct: 402 ANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG 434
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 109/215 (50%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD++ Y ++ + + + + L EM P+ T+N L++ + A+ L
Sbjct: 192 PDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGL 251
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
LN M +P+V F L+DGL + G + M +G P+VV YT ++ Y
Sbjct: 252 LNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFL 311
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
E+ KA+ +F+ + +G PNV +Y+ MI G C DEA + KEM + PN +
Sbjct: 312 VKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVT 371
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y++L+ L +G++++ ++I + +G+ ++++
Sbjct: 372 YSSLIDGLCKSGRISDVWDLIDEINNRGQPANIIT 406
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D +++ N + HM P + F ++ L + + F +M KG P++ +
Sbjct: 34 DDAVSSFNHILHMN--NHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTF 91
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I + +L A + ++ G P+ T N+++RG C+ GK EA +
Sbjct: 92 NILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIR 151
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + + + Y TL++ L +G+ A +++R +
Sbjct: 152 KRFHLDQVSYGTLINGLCKSGETRAALQLLRKI 184
>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
Length = 796
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 125/289 (43%), Gaps = 41/289 (14%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ NA++H L K V + M + G D +TYNI++ + K+D+ +L D+M
Sbjct: 459 TSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ GF PD T+NI LH K L+LL+ MK G P ++ + T++DG +A ++
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ E+ G P+ V Y +I Y G + A + D M G P TYNS+
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638
Query: 227 -----------------------------------IRGFCMAGKFDEACTMMKEMESRGC 251
I+GFC GK DEA KEM SRG
Sbjct: 639 MYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGI 698
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
PN + Y TL+ +G EA ++ MV G Y L+S F
Sbjct: 699 PPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGF 747
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 2/263 (0%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD-EGYAPDILT 82
G + + F++ P + + ++ AL Q + V+ +M D + APD+ T
Sbjct: 154 GSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHT 213
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
Y ++ A R G++D +L E+ RSG P TYN+L+ L K + A L M
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E PS++ F L+ GL+R EM G P+ V Y MI + G
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A LFD M++KG V TYN + + C G+ + A ++ EM G + ++N++V
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393
Query: 263 S-NLRNAGKLAEAHEVIRHMVEK 284
+ +LR G+L +IR M+ +
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLAR 416
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 132/266 (49%), Gaps = 6/266 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T+NI+I C ++ A ++ + IK F+P ++N LH
Sbjct: 483 MVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKR---GFKPDLFTFNIFLHTYCN 539
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + I + QM EG PDI+TY ++ + + + + L E+ ++G P+
Sbjct: 540 LGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVI 599
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ G+ A+ +L+ MK G P+ + + +LM + AG ++ K F +
Sbjct: 600 YNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCI 659
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K V+ YT++I + G++++A F M ++G PN TY +++ + +G +
Sbjct: 660 VKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKE 719
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVS 263
EA + EM S G P+ + YNTL+S
Sbjct: 720 EASKLFDEMVSLGIVPDSVSYNTLIS 745
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG--FSPDFHTYNILLHVL 125
+ ++S G +P I T +I++ A G+LD ++ EM R G +PD HTY ++ L
Sbjct: 163 FLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKAL 221
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + AA +L ++ G P+V+ + LMD L ++G ++ M P +
Sbjct: 222 CRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSI 281
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V + ++I+ + + + M G PN YN MI C G EA + E
Sbjct: 282 VTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDE 341
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
M S+G + YN + L G++ A +++ M+ G +H
Sbjct: 342 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVH 385
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 117/257 (45%), Gaps = 1/257 (0%)
Query: 29 VVERFIKSKLFNF-RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
+V R I+ L F +P A + L +++ ++ Q+ +G ++ T N ++
Sbjct: 405 LVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALI 464
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
+ + + ++L M SG D TYNI++ K K A+ L + M + GF
Sbjct: 465 HGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFK 524
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P + F + G ++ + D+M ++G PD+V Y +I Y A ++ KA +
Sbjct: 525 PDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEY 584
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
++ G PN YN++I G+ G +A ++ M+ G P + YN+L+ + +
Sbjct: 585 LTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCH 644
Query: 268 AGKLAEAHEVIRHMVEK 284
AG + E V + K
Sbjct: 645 AGLVEEVKAVFAQCIVK 661
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 129/284 (45%), Gaps = 5/284 (1%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T T+N++ +C GE+ A K+++ + + + NS + L G
Sbjct: 342 MVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNS--VVAWHLRG 399
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L+ + ++M P+ + + GK ++ + ++ G + T
Sbjct: 400 TGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVAT 459
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L+H L +G+ A +L M G + + + ++ G +A +D D+M
Sbjct: 460 SNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMI 519
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD+ + + + +Y G++E+ L D M ++G P++ TY ++I G+C A
Sbjct: 520 KRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMH 579
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+A + E+ G PN ++YN L+ G +++A ++ M
Sbjct: 580 KANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTM 623
>gi|8777358|dbj|BAA96948.1| salt-inducible protein-like [Arabidopsis thaliana]
Length = 1012
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 144/264 (54%), Gaps = 4/264 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSY-NAILHALLGIRQYKLIEWVYQQMSDEGY-AP 78
GE+ A +V+E + +K N+ PF N +A++ I + +L ++ D G P
Sbjct: 189 GEMDNAIEVLE-MMTNKNVNY-PFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVP 246
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
+++TY ++ A +LGK+D+ L+ + GF D Y+ +H KG + AL
Sbjct: 247 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 306
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M E G + V+ ++ L+DGLS+ GN++ +M +G P+++ YT +I
Sbjct: 307 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 366
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+LE+A LF+ +++ G + F Y ++I G C G + A +M+ +ME RG P+ L Y
Sbjct: 367 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 426
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMV 282
NT+++ L AG+++EA EV + +V
Sbjct: 427 NTVINGLCMAGRVSEADEVSKGVV 450
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 105/215 (48%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D++ Y I++ + G L + L G + + TYN L++ L + + AL L
Sbjct: 695 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 754
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ ++ +G PS + + L+D L + G + D M +KG +P+++ Y ++ Y
Sbjct: 755 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 814
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+ E A + + P+ FT +SMI+G+C G +EA ++ E + + + +F +
Sbjct: 815 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 874
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
L+ G++ EA ++R M+ + L+++
Sbjct: 875 LFLIKGFCTKGRMEEARGLLREMLVSESVVKLINR 909
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 41/256 (16%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M EG P+++TY ++ ++GKL++ L + + G D Y L+ + +
Sbjct: 343 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 402
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A ++L M++ G PS+L + T+++GL AG + DE++ KG + DV+ Y+
Sbjct: 403 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVS-KGVVGDVITYS 457
Query: 190 VMITSYIAAGELE-----------------------------------KAQDLFDGMITK 214
++ SYI ++ +A L+ M
Sbjct: 458 TLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEM 517
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
P+ TY +MI+G+C G+ +EA M E+ + + YN ++ L G L A
Sbjct: 518 DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTA 576
Query: 275 HEVIRHMVEKGKYIHL 290
EV+ + EKG Y+ +
Sbjct: 577 TEVLIELWEKGLYLDI 592
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 8/259 (3%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P NS + L L ++++ I Y Q+ + + Y+IV A L + +
Sbjct: 63 FSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAE 122
Query: 101 RLLD-EMGRSGFSPDFHTYNILLH--VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+ ++ + ++ P H + L+H + + D L L + ++ G PS L F +L+
Sbjct: 123 KFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLI 182
Query: 158 DGLSRAGNLDACKYFFDEMANKGC---MPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
G +D + M NK + VC V I+ + G+ E A F+ +
Sbjct: 183 YRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAV-ISGFCKIGKPELALGFFESAVDS 241
Query: 215 GQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G L PN+ TY +++ C GK DE +++ +E G + + Y+ + G L +
Sbjct: 242 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVD 301
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A R MVEKG +VS
Sbjct: 302 ALMQDREMVEKGMNRDVVS 320
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G + +TYN ++ + G L + RL D + G P TY IL+ L K L A
Sbjct: 726 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 785
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMIT 193
LL+ M G P+++ + +++DG + G DA + +M + PD + MI
Sbjct: 786 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIK 844
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y G++E+A +F K + F + +I+GFC G+ +EA +++EM
Sbjct: 845 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM------- 897
Query: 254 NFLVYNTLVSNL-RNAGKLAEAHEVIRHMVE 283
LV ++V + R +LAE+ + +VE
Sbjct: 898 --LVSESVVKLINRVDAELAESESIRGFLVE 926
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 97/241 (40%), Gaps = 42/241 (17%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL--GKGDKPL-------- 132
YN ++ A + G LD +L E+ G D HT LLH + GDK +
Sbjct: 560 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 619
Query: 133 -------------------------AALNLLNHMKEVGFD---PSVLHFTTLMDGLSRAG 164
AA+ + M+ G PS + TL+D L
Sbjct: 620 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLR--- 675
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+LDA + DV+ YT++I G L KA +L ++G N TYN
Sbjct: 676 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 735
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I G C G EA + +E+ G P+ + Y L+ NL G +A +++ MV K
Sbjct: 736 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 795
Query: 285 G 285
G
Sbjct: 796 G 796
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 110/298 (36%), Gaps = 58/298 (19%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N LI + G + + F + P + +Y ++ L +
Sbjct: 726 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 785
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE--MGRSGFSPDFHTYNILL 122
E + M +G P+I+ YN ++ +LG+ + R++ MGR +PD T
Sbjct: 786 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR--VTPDAFT----- 838
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
++++ G + G+++ F E +K
Sbjct: 839 ------------------------------VSSMIKGYCKKGDMEEALSVFTEFKDKNIS 868
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV-------FTYNSMIRGF----C 231
D + +I + G +E+A+ L M+ + + + IRGF C
Sbjct: 869 ADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELC 928
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
G+ +A ++ E+ S +Y + NL + +L ++V ++K Y+H
Sbjct: 929 EQGRVPQAIKILDEISST-------IYPS-GKNLGSYQRLQFLNDVNEEEIKKKDYVH 978
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/285 (30%), Positives = 135/285 (47%), Gaps = 6/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI++G T+NILI C+CGEV A +++E+ IK L P K SY ++H
Sbjct: 303 MIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLL---PNKVSYTPLIHNYCK 359
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+Y + +MS+ G+ PD++TY ++ G++D + ++M G PD +
Sbjct: 360 QGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANI 419
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L+ L K + AA LL M + P TL+DG R G+ + K F+
Sbjct: 420 YNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTI 479
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P VV Y MI Y G ++ A F MI P+ FTY+++I G+
Sbjct: 480 EKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLH 539
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
A M M C PN + Y L++ +G + A + + M+
Sbjct: 540 GALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML 584
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++++ +G+ P + TY ++ + GK + +LL EM G H YN ++
Sbjct: 229 LFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQF 288
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A + + M + G DP + + L+ G G + + ++ +G +P+ V
Sbjct: 289 KHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKV 348
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT +I +Y GE +A DL M +G P++ TY ++I G +AG+ D A T+ +M
Sbjct: 349 SYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKM 408
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+G P+ +YN L+S L G+L A ++ M+++
Sbjct: 409 VEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQ 446
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 127/273 (46%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N LI + G + F + K+ F P +Y AI++ ++++++ + +MS
Sbjct: 210 YNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMS 269
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ G I YN ++ A+++ G + + M +SG PD TYNIL+ +
Sbjct: 270 ERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVH 329
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A LL + G P+ + +T L+ + G +M+ +G PD+V Y +I
Sbjct: 330 KAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALI 389
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
I AGE++ A + + M+ KG LP+ YN ++ G C G+ A ++ EM +
Sbjct: 390 HGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVA 449
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + TLV G EA ++ +EKG
Sbjct: 450 PDAFITATLVDGFIRHGDFEEAKKLFELTIEKG 482
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 108/225 (48%), Gaps = 4/225 (1%)
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+KLIE + + G P+I+ YN ++ + G ++ + L E+ GF P TY
Sbjct: 192 WKLIEKRWGR----GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGA 247
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K K LL M E G D S+ + ++D + G M G
Sbjct: 248 IINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSG 307
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+ Y ++IT + GE+ KA+ L + I +G LPN +Y +I +C G++ A
Sbjct: 308 CDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRAL 367
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M RG P+ + Y L+ L AG++ A V MVEKG
Sbjct: 368 DLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG 412
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 8/283 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGIRQ 60
GF T +T+ +I C G+ + K++ + L + + N +A I
Sbjct: 237 GFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEA 296
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ W M G PD+ TYNI++ G++ + +LL++ + G P+ +Y
Sbjct: 297 ADTVGW----MIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTP 352
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H K + L AL+LL M E G P ++ + L+ GL AG +D ++M KG
Sbjct: 353 LIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG 412
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD Y V+++ G L A+ L M+ + P+ F +++ GF G F+EA
Sbjct: 413 VLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAK 472
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ + +G +P + YN ++ G + +A + M++
Sbjct: 473 KLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQ 515
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 135/287 (47%), Gaps = 5/287 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKS--KLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
T F+++I + GL + +E F ++ K+ + P S N++L+ L+ + ++
Sbjct: 100 TREAFSLVISVFADCGLVDRALE-FYRTFIKIHHCVPDVFSCNSLLNVLVKHGKVEIACK 158
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VL 125
VY +M D D T I++ + GK++ +L+++ G P+ YN L+
Sbjct: 159 VYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYC 218
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
KGD A + L +K GF P+V + +++G + G + EM+ +G +
Sbjct: 219 KKGDTERANV-LFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSI 277
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y +I + G +A D MI G P++ TYN +I G C G+ +A ++++
Sbjct: 278 HIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQ 337
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG PN + Y L+ N G+ A +++ M E+G LV+
Sbjct: 338 AIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVT 384
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 126/328 (38%), Gaps = 53/328 (16%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G A +N+L +C G + A+ ++ + N P ++ +
Sbjct: 408 MVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQ---NVAPDAFITATLVDGFIR 464
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + +++ ++G P ++ YN ++ + G + M + SPD T
Sbjct: 465 HGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFT 524
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ ++ K + AL + M + P+V+ +T L++G +G+++ + F +M
Sbjct: 525 YSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQML 584
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN------------- 224
+ P+VV YT++I + L KA F+ M+ + LPN TYN
Sbjct: 585 SLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFV 644
Query: 225 ----------------------------------SMIRGFCMAGKFDEACTMMKEMESRG 250
S++ C A + +M S+G
Sbjct: 645 ISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKG 704
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
P+ + L+ L G+ + + VI
Sbjct: 705 FLPDPVSLVALLHGLCLEGRSQDWNNVI 732
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDE 105
+Y +LHAL +Y+ ++ ++ +G P I+TYN+V+ R+G+ + LL+E
Sbjct: 182 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 241
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M +G PD T + ++ G+ A+ +K G P V+ + L+ +AGN
Sbjct: 242 MRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGN 301
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM + GC PD V Y + +Y AG E+A D M +KG LPN FTYN+
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + G+ DEA + M+ G PN YN + L + E++ M G
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQYKLIEWVY 68
R + ++ G + ++ F + + P +YN +L + +G R + I +
Sbjct: 181 RAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMG-RSWPRIVALL 239
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD T + V+ A R G LDQ +++ G P TYN LL V GK
Sbjct: 240 EEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKA 299
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL +L M++ G P + + L +RAG + D M +KG +P+ Y
Sbjct: 300 GNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTY 359
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++T+Y G +++A LFD M G +PNV TYN + +F M++EM
Sbjct: 360 NTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR 419
Query: 249 RGCNPNFLVYNTLVS 263
GC PN + +NT+++
Sbjct: 420 SGCTPNRVTWNTMLA 434
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGI 58
M +G T+N ++ CG+ G+ V K +++YN ++ A G
Sbjct: 417 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGS 476
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R Y +Y +M G+ P + TYN ++ R G ++ +M ++GF P+ +Y
Sbjct: 477 RTYAFK--MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 534
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++LL KG ++ + PS + TL+ + L+ + F E+
Sbjct: 535 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 594
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G PD+V + M+ Y G KA ++FD + G P++ TYNS++ + + + E
Sbjct: 595 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 654
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++K+++S P+ + YNT+++ G + EA ++ M+ G
Sbjct: 655 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 701
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T + +I CG GL + V F K P +YNA+L Y V ++M
Sbjct: 253 TASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM 312
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G PD +TYN + R G ++ + LD M G P+ TYN ++ +
Sbjct: 313 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 372
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L + MK+ G+ P+V + + L + A +EM+ GC P+ V + M
Sbjct: 373 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 432
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ G + + +GM + G + TYN++I + G A M EM S G
Sbjct: 433 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 492
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P YN L++ L G + A ++ M++ G
Sbjct: 493 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNG 526
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK-GDKPLAALNL 137
D+ Y V+ A R G+ ++ +L E+ R G P TYN++L V G+ G + L
Sbjct: 179 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 238
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M+ G +P +T++ R G LD FF+++ +G +P VV Y ++ +
Sbjct: 239 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 298
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
AG +A + M G P+ TYN + + AG F+EA + M S+G PN
Sbjct: 299 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 358
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+++ N G++ EA + M + G
Sbjct: 359 YNTVMTAYANVGRVDEALALFDRMKKNG 386
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
MI +GF T+N L+ G+ A+ +V + +K+ F+P SY+ +L
Sbjct: 487 MISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN---GFKPNDQSYSLLLQCYAK 543
Query: 54 -------------------------------ALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
A R+ + +E +Q++ +GY PD++
Sbjct: 544 GGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVI 603
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+N ++ + G + + D + +SG SPD TYN L+ + K ++ A +L +K
Sbjct: 604 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 663
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
P V+ + T+++G + G + + EM G P VV Y ++ Y +
Sbjct: 664 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFN 723
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+++ + MI P TY ++ +C A ++DEA + E+ N + + + L
Sbjct: 724 EAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHMLE 783
Query: 263 SNLRNA 268
+ +++A
Sbjct: 784 ARIKDA 789
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G A T+N L T G A K ++ L P +YN ++ A
Sbjct: 312 MEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL---PNTFTYNTVMTAYAN 368
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M GY P++ TYN++ + + +L+EM RSG +P+ T
Sbjct: 369 VGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVT 428
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N +L V GK +LN MK G + S + TL+ R G+ +DEM
Sbjct: 429 WNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI 488
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P + Y ++ G+ AQ + M+ G PN +Y+ +++ + G
Sbjct: 489 SSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAA 548
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
++ KE+ P++++ TLV
Sbjct: 549 GIESIEKEVYVGTIFPSWVILRTLV 573
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 134 ALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEMA-NKGCMPDVVCYTVM 191
AL LL + G D + L ++ L R G D DEM G DV YT +
Sbjct: 129 ALALLRWASDEGAADAAALEM--VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTV 186
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK-FDEACTMMKEMESRG 250
+ + AG E+A LF + +G +P + TYN ++ + G+ + +++EM + G
Sbjct: 187 LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 246
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +T+++ G L +A + +G
Sbjct: 247 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARG 281
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 120/241 (49%), Gaps = 4/241 (1%)
Query: 47 SYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+YN ++ L R+ KL E V QM +G P+++TYN ++ +GKL + L
Sbjct: 305 TYNTLIGGL--CREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
++ G SP TYNIL+ + A ++ M+E G PS + +T L+D +R+
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N++ M G +PDV Y+V+I + G++ +A LF M+ K PN YN
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYN 482
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+MI G+C G A ++KEME + PN Y ++ L K EA ++ M++
Sbjct: 483 TMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDS 542
Query: 285 G 285
G
Sbjct: 543 G 543
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 144/321 (44%), Gaps = 39/321 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GI 58
+ E GF + LI C + G K + F + + +Y +++ L G+
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGV 248
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLG--------------------- 94
++ +Y++M ++G P++ TYN VM C R
Sbjct: 249 KKQGF--EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTY 306
Query: 95 -----------KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
KL++ ++++D+M G +P+ TYN L+ K AL+L +K
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G PS++ + L+ G R G+ EM +G P V YT++I ++ + +EK
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A L M G +P+V TY+ +I GFC+ G+ +EA + K M + C PN ++YNT++
Sbjct: 427 AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMIL 486
Query: 264 NLRNAGKLAEAHEVIRHMVEK 284
G A ++++ M EK
Sbjct: 487 GYCKEGSSYRALKLLKEMEEK 507
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 131/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+F ILI C E G K + I+ F F P Y ++ + + + ++ +M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G + TY +++ ++ G Q + ++M G P+ +TYN +++ L K +
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + + M+E G +++ + TL+ GL R L+ D+M + G P+++ Y +
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + G+L KA L + ++G P++ TYN ++ GFC G A M+KEME RG
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y L+ + + +A ++ M E G
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELG 438
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 121/245 (49%), Gaps = 1/245 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y I+++ + + L + +M D G+ P +N ++ +Q+ +E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-N 155
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+S D +++ IL+ + + + +LL + E GF P+V+ +TTL+DG + G ++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
K F EM G + + YTV+I G ++ ++++ M G PN++TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
C G+ +A + EM RG + N + YNTL+ L KL EA++V+ M G
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 288 IHLVS 292
+L++
Sbjct: 336 PNLIT 340
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 7/270 (2%)
Query: 1 MIENGFPTTARTFNILIC-TCGEVGL--ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N LI C E+ L A KVV++ +KS N P +YN ++ G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQ-MKSDGIN--PNLITYNTLIDGFCG 350
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + + G +P ++TYNI++ R G +++ EM G P T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ + D A+ L M+E+G P V ++ L+ G G ++ F M
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K C P+ V Y MI Y G +A L M K PNV +Y MI C K
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
EA ++++M G +P+ + +L+S +N
Sbjct: 531 EAERLVEKMIDSGIDPSTSIL-SLISRAKN 559
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 120/252 (47%), Gaps = 1/252 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P N +N +L ++G + W + + D+ ++ I++ G++++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQW-WSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSF 183
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL E+ GFSP+ Y L+ K + A +L M ++G + +T L++GL
Sbjct: 184 DLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL 243
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G +++M G P++ Y ++ G + A +FD M +G N+
Sbjct: 244 FKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN++I G C K +EA ++ +M+S G NPN + YNTL+ GKL +A + R
Sbjct: 304 VTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRD 363
Query: 281 MVEKGKYIHLVS 292
+ +G LV+
Sbjct: 364 LKSRGLSPSLVT 375
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 140/284 (49%), Gaps = 2/284 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
I + + ++ + L+ + + ++ F ++ F+P ++ +L++L R
Sbjct: 119 IHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLT 178
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ VY++M G P+I +N+++ A + G +++ +LL+EM PD TYN L
Sbjct: 179 NMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL 238
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ + K AL + + M+ G P ++ + +L+ G R G + F E+ G
Sbjct: 239 ISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGA 296
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ V YT +I Y +LE+A L + M +G P V TYNS++R C GK +A
Sbjct: 297 TPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM R P+ + NTL++ G + A +V + M+E G
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAG 400
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 126/271 (46%), Gaps = 30/271 (11%)
Query: 32 RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA-------------- 77
++++S L + ++S+ I H L +Q+K + + ++++ Y
Sbjct: 63 KWVESNLNHXHSLQSSWTMI-HTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHD 121
Query: 78 -PD----ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
PD IL++ ++ A R+ + D ++ + M GF P H +LL+ L K
Sbjct: 122 DPDSNSQILSWLVIFYANSRMTQ-DAI-QVFEHMRVHGFKPHLHACTVLLNSLAKARLTN 179
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
+ M VG P++ F L+ ++G+++ + +EM ++ PD+ Y +I
Sbjct: 180 MVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLI 239
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ Y G +A + D M G P++ TYNS+I GFC G+ EA + +E+ G
Sbjct: 240 SLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN--GAT 297
Query: 253 PNFLVYNTL------VSNLRNAGKLAEAHEV 277
PN + Y TL V++L A +L E EV
Sbjct: 298 PNHVTYTTLIDGYCRVNDLEEALRLREVMEV 328
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 2/282 (0%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+GF +L+ + + L V + + K P + +N ++HA +
Sbjct: 156 HGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEK 215
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
E + +M PD+ TYN ++ + G + + D M R G SPD TYN L++
Sbjct: 216 AEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIY 275
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + AL L + G P+ + +TTL+DG R +L+ + M +G P
Sbjct: 276 GFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHP 333
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
VV Y ++ G+++ A L + M + P+ T N++I +C G A +
Sbjct: 334 GVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVK 393
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K+M G P+ + L+ ++ A E + M++ G
Sbjct: 394 KKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 98/220 (44%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M EG P ++TYN ++ GK+ +RLL+EM PD T N L++ K
Sbjct: 326 MEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGD 385
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+A+ + M E G P F L+ G + +D+ K F EM + G P Y+
Sbjct: 386 MGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSW 445
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ SY E L D + KG ++ Y ++IR C K + A + M+ +G
Sbjct: 446 LVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKG 505
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ +VY +L AGK A +++ M ++ I L
Sbjct: 506 MKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITL 545
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 5/254 (1%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +YN+IL L + K + +MS+ PD +T N ++ A ++G +
Sbjct: 331 LHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAM 390
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++ +M +G PD T+ L+H K + +A L M + GF PS ++ L+D
Sbjct: 391 KVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSY 450
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
N +A DE++ KG D+ Y +I ++E A+ +F M KG +
Sbjct: 451 YDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDS 510
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK---LAEAHEV 277
Y S+ + AGK A M+ EM+ R +Y ++ G L H +
Sbjct: 511 VVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGSILGLFWDHVI 570
Query: 278 IRHMVEKG--KYIH 289
R ++ K KYI
Sbjct: 571 ERRLISKNILKYIQ 584
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 6/193 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T N LI C G++G A KV ++ +++ L +P + ++ A++H + + +
Sbjct: 372 TCNTLINAYCKIGDMGSAMKVKKKMLEAGL---KPDQFTFKALIHGFCKLHEVDSAKEFL 428
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M D G++P TY+ ++ + Y + RL DE+ R G D Y L+ L K
Sbjct: 429 FEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKI 488
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
DK +A + M+ G + +T+L +AG A DEM + M + Y
Sbjct: 489 DKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
Query: 189 TVMITSYIAAGEL 201
SY G +
Sbjct: 549 RCFSASYAGDGSI 561
>gi|145334827|ref|NP_001078759.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635742|sp|Q9LVD3.2|PP434_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g57250, mitochondrial; Flags: Precursor
gi|332009488|gb|AED96871.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 971
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 144/264 (54%), Gaps = 4/264 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSY-NAILHALLGIRQYKLIEWVYQQMSDEGY-AP 78
GE+ A +V+E + +K N+ PF N +A++ I + +L ++ D G P
Sbjct: 148 GEMDNAIEVLE-MMTNKNVNY-PFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVP 205
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
+++TY ++ A +LGK+D+ L+ + GF D Y+ +H KG + AL
Sbjct: 206 NLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQD 265
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M E G + V+ ++ L+DGLS+ GN++ +M +G P+++ YT +I
Sbjct: 266 REMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKM 325
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+LE+A LF+ +++ G + F Y ++I G C G + A +M+ +ME RG P+ L Y
Sbjct: 326 GKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTY 385
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMV 282
NT+++ L AG+++EA EV + +V
Sbjct: 386 NTVINGLCMAGRVSEADEVSKGVV 409
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 105/215 (48%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D++ Y I++ + G L + L G + + TYN L++ L + + AL L
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
+ ++ +G PS + + L+D L + G + D M +KG +P+++ Y ++ Y
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+ E A + + P+ FT +SMI+G+C G +EA ++ E + + + +F +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
L+ G++ EA ++R M+ + L+++
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREMLVSESVVKLINR 868
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 114/256 (44%), Gaps = 41/256 (16%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M EG P+++TY ++ ++GKL++ L + + G D Y L+ + +
Sbjct: 302 KMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A ++L M++ G PS+L + T+++GL AG + DE++ KG + DV+ Y+
Sbjct: 362 NLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA----DEVS-KGVVGDVITYS 416
Query: 190 VMITSYIAAGELE-----------------------------------KAQDLFDGMITK 214
++ SYI ++ +A L+ M
Sbjct: 417 TLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEM 476
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
P+ TY +MI+G+C G+ +EA M E+ + + YN ++ L G L A
Sbjct: 477 DLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLDTA 535
Query: 275 HEVIRHMVEKGKYIHL 290
EV+ + EKG Y+ +
Sbjct: 536 TEVLIELWEKGLYLDI 551
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 113/259 (43%), Gaps = 8/259 (3%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P NS + L L ++++ I Y Q+ + + Y+IV A L + +
Sbjct: 22 FSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHRIYSIVSWAFLNLNRYEDAE 81
Query: 101 RLLD-EMGRSGFSPDFHTYNILLH--VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
+ ++ + ++ P H + L+H + + D L L + ++ G PS L F +L+
Sbjct: 82 KFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLI 141
Query: 158 DGLSRAGNLDACKYFFDEMANKGC---MPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
G +D + M NK + VC V I+ + G+ E A F+ +
Sbjct: 142 YRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAV-ISGFCKIGKPELALGFFESAVDS 200
Query: 215 GQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G L PN+ TY +++ C GK DE +++ +E G + + Y+ + G L +
Sbjct: 201 GVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVD 260
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A R MVEKG +VS
Sbjct: 261 ALMQDREMVEKGMNRDVVS 279
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 100/211 (47%), Gaps = 12/211 (5%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G + +TYN ++ + G L + RL D + G P TY IL+ L K L A
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMIT 193
LL+ M G P+++ + +++DG + G DA + +M + PD + MI
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR-VTPDAFTVSSMIK 803
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y G++E+A +F K + F + +I+GFC G+ +EA +++EM
Sbjct: 804 GYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM------- 856
Query: 254 NFLVYNTLVSNL-RNAGKLAEAHEVIRHMVE 283
LV ++V + R +LAE+ + +VE
Sbjct: 857 --LVSESVVKLINRVDAELAESESIRGFLVE 885
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 97/241 (40%), Gaps = 42/241 (17%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL--GKGDKPL-------- 132
YN ++ A + G LD +L E+ G D HT LLH + GDK +
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 133 -------------------------AALNLLNHMKEVGFD---PSVLHFTTLMDGLSRAG 164
AA+ + M+ G PS + TL+D L
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTI-LKTLVDNLR--- 634
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+LDA + DV+ YT++I G L KA +L ++G N TYN
Sbjct: 635 SLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYN 694
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I G C G EA + +E+ G P+ + Y L+ NL G +A +++ MV K
Sbjct: 695 SLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK 754
Query: 285 G 285
G
Sbjct: 755 G 755
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 55/298 (18%), Positives = 110/298 (36%), Gaps = 58/298 (19%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N LI + G + + F + P + +Y ++ L +
Sbjct: 685 GVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDA 744
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE--MGRSGFSPDFHTYNILL 122
E + M +G P+I+ YN ++ +LG+ + R++ MGR +PD T
Sbjct: 745 EKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGR--VTPDAFT----- 797
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
++++ G + G+++ F E +K
Sbjct: 798 ------------------------------VSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV-------FTYNSMIRGF----C 231
D + +I + G +E+A+ L M+ + + + IRGF C
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELC 887
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
G+ +A ++ E+ S +Y + NL + +L ++V ++K Y+H
Sbjct: 888 EQGRVPQAIKILDEISST-------IYPS-GKNLGSYQRLQFLNDVNEEEIKKKDYVH 937
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G T+NI I E G + V R + P +YN ++ L
Sbjct: 213 VIQRGMSINLFTYNIWIRGLCEAGRLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSM 271
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M ++G PD TYN ++ ++ + + LL + GF PD TY
Sbjct: 272 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 331
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L AL L N + G P ++ + +L+ GL G + +EMA +G
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+ Y ++I G + A + + I KG LP+VFT+N++I G+C K D A
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 451
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M G P+ + YN++++ L AGK+ E +E + M+ KG
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 496
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 143/283 (50%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYK 62
GF T+ LI G + +E F +++ +P YN+++ L G+ +
Sbjct: 321 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 380
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L V +M++EG PDI TYNIV+ ++G + ++++ G+ PD T+N L+
Sbjct: 381 L--QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 438
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K +AL L+ M E G P + + ++++GL +AG ++ F EM KGC
Sbjct: 439 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 498
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ + Y ++I ++ + ++E+A + M +G P+ ++N++I GFC G + A +
Sbjct: 499 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 558
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++E +G + +NTL+ + A ++ M+ KG
Sbjct: 559 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 601
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN I+ I + + + +G+ PD +TY ++ G +++ L
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+E G PD YN L+ L L AL ++N M E G P + + +++GL +
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN+ ++ KG +PDV + +I Y +L+ A L + M G P+ T
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS++ G C AGK +E +EM +GC+PN + YN L+ N + K+ EA +VI M
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528
Query: 283 EKGKYIHLVS 292
++G + VS
Sbjct: 529 QEGLHPDAVS 538
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 130/330 (39%), Gaps = 65/330 (19%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G R V+ F + LF P +YNAI+ AL+ + VY +M G +PD+
Sbjct: 62 ARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDL 121
Query: 81 LTYNI-------------------------------VMCAKYRLGKLDQFHRLLDEMGRS 109
T+ I V+C Y G +L D+M +
Sbjct: 122 HTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHT 181
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD---------------------- 147
P+ +N +LH L K L A LL + + G
Sbjct: 182 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA 241
Query: 148 ------------PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
P V+ + TL+ GL + ++ M N+GC+PD Y +I Y
Sbjct: 242 VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGY 301
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+++A +L + KG +P+ TY S+I G C G + A + E +++G P+
Sbjct: 302 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 361
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+VYN+LV L G + A +V+ M E+G
Sbjct: 362 VVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +T+NI+I C G + A V+ I + + P ++N ++
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI---MKGYLPDVFTFNTLIDGYCK 443
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M + G APD +TYN V+ + GK+++ + EM G P+ T
Sbjct: 444 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 503
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ + +K A ++ M + G P + F TL+ G R G+L+ F ++
Sbjct: 504 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 563
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG + +I ++ + A+ +FD M++KG + +TY +I G C D
Sbjct: 564 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 623
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM +G P+ + ++++L ++ +A +I MV+ G
Sbjct: 624 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 671
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 14/289 (4%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I G+ TFN LI C ++ A ++VER + + P +YN++L+ L
Sbjct: 423 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE---YGIAPDTITYNSVLNGLCKA 479
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + +Q+M +G P+ +TYNI++ R K+++ +++ +M + G PD ++
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L++ + A L ++E G+ + F TL+ S N+ + FDEM +
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 599
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG D Y V+I +++A MI KG +P++ T+ +I + + +
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 659
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK--LAEAHEVIRHMVEKG 285
A ++ M G P +V + NA K +A ++ +++KG
Sbjct: 660 AVGIIHIMVKIGVVPE------VVDTILNADKKEIAAPKILVEDLMKKG 702
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Query: 146 FDPSVLH--FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P+ +H + + +RAG L F+ M C P Y ++ + + A ++
Sbjct: 45 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A ++ M+ G P++ T+ +R FC+ + A +++ + RG + Y T+V
Sbjct: 105 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVC 160
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L G +A ++ M+ + +L +
Sbjct: 161 GLYAHGHTHDARQLFDQMLHTHVFPNLAA 189
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 144/298 (48%), Gaps = 19/298 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ LI C GE A +++R + KL YN +++ +
Sbjct: 33 LVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQR-VDGKLVQLNAV--MYNTVIYGMCK 89
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M +G +P+++TY+ ++ + +GKL L +++ PD +T
Sbjct: 90 DKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYT 149
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ K K + M + G P V+ + +L+DG ++ K F+ MA
Sbjct: 150 FNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMA 209
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD+ Y ++I + +++KA +LF+ M K +PNV TYNS+I G +G+
Sbjct: 210 QGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRIS 269
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFK 295
A ++ +M RG PN L YN+++ L + H+V K I L++KFK
Sbjct: 270 YALQLVDQMHDRGVPPNILTYNSIID------ALFKTHQV-------DKAIALITKFK 314
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 126/247 (51%), Gaps = 2/247 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G T++ LI VG + ++ F K L N +P ++N ++ R+
Sbjct: 103 MVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 162
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTYN 119
K + V+ M +G PD++TYN + YRL K ++ + + M + G +PD +YN
Sbjct: 163 MKEGKTVFAMMMKQGIIPDVVTYN-SLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYN 221
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
IL++ K K A+NL N M P+V+ + +L+DGLS++G + D+M ++
Sbjct: 222 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDR 281
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+++ Y +I + +++KA L +G P+++TY +I G C G+ +A
Sbjct: 282 GVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341
Query: 240 CTMMKEM 246
+ +++
Sbjct: 342 RNIFEDL 348
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 130/284 (45%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G+ T N LI C G++ A ++ + F + SY ++H L + +
Sbjct: 2 GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVA---LGFHLDQVSYGTLIHGLCKVGET 58
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + Q++ + + + YN V+ + ++ L EM G SP+ TY+ L
Sbjct: 59 RAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL 118
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K A++L N + P F L+DG + + K F M +G
Sbjct: 119 ISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 178
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+PDVV Y ++ Y E+ A+ +F+ M G P++ +YN +I GFC K D+A
Sbjct: 179 IPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMN 238
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM + PN + YN+L+ L +G+++ A +++ M ++G
Sbjct: 239 LFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRG 282
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%)
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
+G+ P+ + TL+ GL G + F D++ G D V Y +I GE
Sbjct: 1 MGYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRA 60
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A DL + K N YN++I G C ++A + EM S+G +PN + Y+ L+S
Sbjct: 61 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 120
Query: 264 NLRNAGKLAEAHEVIRHMV 282
GKL +A ++ ++
Sbjct: 121 GFFVVGKLKDAIDLFNKII 139
>gi|302767038|ref|XP_002966939.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
gi|300164930|gb|EFJ31538.1| hypothetical protein SELMODRAFT_30641 [Selaginella moellendorffii]
Length = 506
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 123/243 (50%), Gaps = 1/243 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN+++ L R+ K V+ +M+ G +PDI TYNI+ R G ++LL M
Sbjct: 253 TYNSLVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRM 312
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G PD T+N L++ L + ++ A+ L+ M G DP+ + +T L+ L+R
Sbjct: 313 NQDGVLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARA 372
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG-QLPNVFTYNS 225
D C F + ++ P+V Y ++++ AG L++A LF M+ PN TY +
Sbjct: 373 DECVELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDCTPPNAITYRA 432
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G C+ + + A ++ M R C P+ Y T+V+ G++ EA E++ M G
Sbjct: 433 LIHGLCLKMELERAVLLLDAMAKRDCAPDVACYGTIVAAFCKQGRIDEAFELLERMPFAG 492
Query: 286 KYI 288
+
Sbjct: 493 DKV 495
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 131/285 (45%), Gaps = 2/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALLGIR 59
M ENG + + N + + G +E F ++K F+ R ++Y+ ++ AL +
Sbjct: 102 MAENGSTLSIQDLNGCLRGLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAK 161
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + + ++M G D TY++++ + + G +D+ L++ M PD Y+
Sbjct: 162 RNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYD 221
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L K + A+ + + SV+ + +L+ G +A L F MA
Sbjct: 222 PVIEELSKTGRVDEAVEIAKE-ADAKHCTSVVTYNSLVLGFLKARRLKRGIKVFTRMART 280
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+ Y ++ G A L M G LP+ T+NS+I G ++ A
Sbjct: 281 GPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFNSLINGLVEDNRYHRA 340
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
T+++EM SRGC+PN + Y L+ L + E E+ + ++++
Sbjct: 341 VTLIQEMVSRGCDPNAITYTILLKWLARNARADECVELFQRLLDR 385
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 114/277 (41%), Gaps = 3/277 (1%)
Query: 3 ENGFPTTAR--TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+N F A T++IL+ V E + + K++Y+ I+H+L
Sbjct: 138 KNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGM 197
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M PD Y+ V+ + G++D+ + E + TYN
Sbjct: 198 VDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKE-ADAKHCTSVVTYNS 256
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + + + M G P + + L +GLSR G M G
Sbjct: 257 LVLGFLKARRLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDG 316
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD V + +I + +A L M+++G PN TY +++ + DE
Sbjct: 317 VLPDAVTFNSLINGLVEDNRYHRAVTLIQEMVSRGCDPNAITYTILLKWLARNARADECV 376
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ + + R PN YNT++S L AG+L +AH +
Sbjct: 377 ELFQRLLDRKLAPNVYTYNTVMSALCKAGRLDQAHRL 413
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 113/267 (42%), Gaps = 45/267 (16%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS-PDFHTYNILLHVL---------- 125
AP++ TYN VM A + G+LDQ HRL M S + P+ TY L+H L
Sbjct: 1 APNVYTYNTVMSALCKAGRLDQAHRLFGVMLASDSTPPNAITYRALIHGLCLKMELERAV 60
Query: 126 ---------------------------GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+G+ A + LL M E G S+ +
Sbjct: 61 LLLDAVYFKLSWLVPATYLIIRFKACHERGNLR-ATIELLKDMAENGSTLSIQDLNGCLR 119
Query: 159 GLSRAGNLDACKYFFDEMANKGCM-PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
GL +AGN+D FF E N + V Y++++ + AA ++ M + G
Sbjct: 120 GLCKAGNVDGALEFFREAKNSFSLRASVSTYSILVAALTAAKRNNDVYEILREMESVGLE 179
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ TY+ +I C +G D+A +++ M SR C P+ +Y+ ++ L G++ EA E+
Sbjct: 180 ADKDTYSLIIHSLCKSGMVDKAKVLVERMISRNCVPDARIYDPVIEELSKTGRVDEAVEI 239
Query: 278 -----IRHMVEKGKYIHLVSKFKRYKR 299
+H Y LV F + +R
Sbjct: 240 AKEADAKHCTSVVTYNSLVLGFLKARR 266
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 1/206 (0%)
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+ TY+I++ A + + + +L EM G D TY++++H L K A L+
Sbjct: 147 VSTYSILVAALTAAKRNNDVYEILREMESVGLEADKDTYSLIIHSLCKSGMVDKAKVLVE 206
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M P + +++ LS+ G +D E K C VV Y ++ ++ A
Sbjct: 207 RMISRNCVPDARIYDPVIEELSKTGRVDEAVEIAKEADAKHCT-SVVTYNSLVLGFLKAR 265
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
L++ +F M G P+++TYN + G G + A ++ M G P+ + +N
Sbjct: 266 RLKRGIKVFTRMARTGPSPDIYTYNILFEGLSRHGLWRFAYKLLPRMNQDGVLPDAVTFN 325
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
+L++ L + A +I+ MV +G
Sbjct: 326 SLINGLVEDNRYHRAVTLIQEMVSRG 351
>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
Length = 624
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 129/248 (52%), Gaps = 10/248 (4%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYA---PDILTYNIVM---CAKYRLGKLDQFH 100
SYN +L AL + + + MS E + P+ ++Y ++M CA RL DQ
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCAD-RLA--DQAV 135
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL M +G D TY L+ L + A+ L+ M E G +P+V+ +++L+ G
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
++G + F EM+ KG PDVV YT +I S G+ +KA + D M+ +G PNV
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN +I C G EA ++K+M +G P+ + YNTL+ L + ++ EA ++
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315
Query: 281 MVEKGKYI 288
MV +GK I
Sbjct: 316 MV-RGKNI 322
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 152/297 (51%), Gaps = 7/297 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N LI +V A ++E ++ K +P ++N+++ L
Sbjct: 281 MSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI-VKPNVVTFNSVIQGLCD 339
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + V M + G +++TYN+++ R+ K+ + L+DEM G PD T
Sbjct: 340 IGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFT 399
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL+ K + A +LL+ M++ G +P + H+ L+ + G ++ + F+EM
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N + DVV Y+ MI AG+L+ A++L ++ +G P+ TY+ +I F +G +
Sbjct: 460 NNFPL-DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDME 518
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
A ++K+M + G P+ V+++L+ G++ + E+IR M+ K I L SK
Sbjct: 519 AANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN--IALDSKI 573
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP SY ++ AL R + + M G D++TY ++ ++D+
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ EM SG P+ Y+ LL K + + M E G +P V+ +T L+D L
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G D M +G P+VV Y V+I G +++A + M KG P+V
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCN---PNFLVYNTLVSNLRNAGKLAEAHEVI 278
TYN++I+G + DEA +++EM RG N PN + +N+++ L + G++ +A +V
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350
Query: 279 RHMVEKGKYIHLVS 292
M E G ++LV+
Sbjct: 351 AMMEETGCMVNLVT 364
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 8/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ LI C EV A +++ +S P Y+++L
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES---GIEPNVVVYSSLLQGYCK 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + V+ +MS++G PD++ Y ++ + ++GK + H ++D M R G P+ T
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L++ + K A+ +L M E G P V+ + TL+ GLS +D + +EM
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 178 NKGCM--PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ P+VV + +I G + +A + M G + N+ TYN +I G K
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +M EM S G P+ Y+ L+ ++ A +++ M ++G
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427
Score = 103 bits (257), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 4/284 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++ L+ + G V + F++ P Y ++ +L + +
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V M G P+++TYN+++ + G + + +L +M G +PD TYN
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 121 LLHVLGKGDKPLAALNLLNHM---KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ L + A+ LL M K + P+V+ F +++ GL G + M
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMVRGKNI-VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GCM ++V Y ++I + ++ KA +L D M + G P+ FTY+ +I+GFC + D
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A ++ M RG P Y L+ + G + A + M
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL---GKGDKPLAALNLLNHMKEVGFDP 148
RL L + LLD + D +YN +L L G D+ A L ++ P
Sbjct: 57 RLLPLGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRP 113
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ + +T LM L D M + G DVV Y +I A E++KA +L
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M G PNV Y+S+++G+C +G++++ + EM +G P+ ++Y L+ +L
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
GK +AH V+ MV +G ++V+
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVT 257
>gi|125562258|gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G P + TF+ +I + G+ L + VE F + F YNA+L AL +
Sbjct: 148 GLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGA 207
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++M+ +G APD T++ ++ A GKL + LD+M GF P ++L+
Sbjct: 208 YKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDG 267
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + + A M + G P V F +L + L +G+++ + +++G PD
Sbjct: 268 LVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPD 327
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ Y VMI + AG +++A LF + G P Y ++I+ C AG+F +A
Sbjct: 328 ISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFG 387
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M+S+G PN VY LV G+ EA + M E G
Sbjct: 388 DMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAG 428
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%)
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+L M+ +G S F+ ++ ++ D F+ + GC Y ++ +
Sbjct: 139 SLAADMRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDAL 198
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A G A L M KG P+ T+++++ +C AGK EA + +M RG +P
Sbjct: 199 CANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPV 258
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ LV L AG+L EA M ++G
Sbjct: 259 RGRDLLVDGLVRAGRLEEAKAFALRMTKEG 288
>gi|125604075|gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 132/281 (46%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G P + TF+ +I + G+ L + VE F + F YNA+L AL +
Sbjct: 144 GLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDALCANGSFAGA 203
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++M+ +G APD T++ ++ A GKL + LD+M GF P ++L+
Sbjct: 204 YKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPVRGRDLLVDG 263
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + + A M + G P V F +L + L +G+++ + +++G PD
Sbjct: 264 LVRAGRLEEAKAFALRMTKEGVLPDVATFNSLAEALCSSGDVEFAVALLADASSRGLCPD 323
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ Y VMI + AG +++A LF + G P Y ++I+ C AG+F +A
Sbjct: 324 ISTYKVMIPAVAKAGRIDEAFRLFYAALEDGHRPFPSLYAAIIKALCKAGRFADAFAFFG 383
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M+S+G PN VY LV G+ EA + M E G
Sbjct: 384 DMKSKGHPPNRPVYVMLVKMCVRGGRFVEAANYLVEMSEAG 424
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 66/150 (44%)
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+L M+ +G S F+ ++ ++ D F+ + GC Y ++ +
Sbjct: 135 SLAADMRALGLPLSPSTFSAVISSYGQSRLTDQAVEVFNRLPRFGCPQTTQVYNALLDAL 194
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A G A L M KG P+ T+++++ +C AGK EA + +M RG +P
Sbjct: 195 CANGSFAGAYKLLRRMARKGVAPDRATFSTLVDAWCAAGKLREAQAFLDDMAERGFHPPV 254
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ LV L AG+L EA M ++G
Sbjct: 255 RGRDLLVDGLVRAGRLEEAKAFALRMTKEG 284
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 1/240 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK-LDQFHRLLDE 105
+Y +LHAL +Y+ ++ ++ +G P I+TYN+V+ R+G+ + LL+E
Sbjct: 91 AYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEE 150
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M +G PD T + ++ G+ A+ +K G P V+ + L+ +AGN
Sbjct: 151 MRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGN 210
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM + GC PD V Y + +Y AG E+A D M +KG LPN FTYN+
Sbjct: 211 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 270
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + G+ DEA + M+ G PN YN + L + E++ M G
Sbjct: 271 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 330
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 120/255 (47%), Gaps = 3/255 (1%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQYKLIEWVY 68
R + ++ G + ++ F + + P +YN +L + +G R + I +
Sbjct: 90 RAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMG-RSWPRIVALL 148
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G PD T + V+ A R G LDQ +++ G P TYN LL V GK
Sbjct: 149 EEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKA 208
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL +L M++ G P + + L +RAG + D M +KG +P+ Y
Sbjct: 209 GNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTY 268
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++T+Y G +++A LFD M G +PNV TYN + +F M++EM
Sbjct: 269 NTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR 328
Query: 249 RGCNPNFLVYNTLVS 263
GC PN + +NT+++
Sbjct: 329 SGCTPNRVTWNTMLA 343
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 4/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGI 58
M +G T+N ++ CG+ G+ V K +++YN ++ A G
Sbjct: 326 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGS 385
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R Y +Y +M G+ P + TYN ++ R G ++ +M ++GF P+ +Y
Sbjct: 386 RTYAFK--MYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSY 443
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
++LL KG ++ + PS + TL+ + L+ + F E+
Sbjct: 444 SLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKA 503
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G PD+V + M+ Y G KA ++FD + G P++ TYNS++ + + + E
Sbjct: 504 QGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWE 563
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++K+++S P+ + YNT+++ G + EA ++ M+ G
Sbjct: 564 AEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADG 610
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 118/274 (43%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T + +I CG GL + V F K P +YNA+L Y V ++M
Sbjct: 162 TASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEM 221
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G PD +TYN + R G ++ + LD M G P+ TYN ++ +
Sbjct: 222 EDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRV 281
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L + MK+ G+ P+V + + L + A +EM+ GC P+ V + M
Sbjct: 282 DEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTM 341
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ G + + +GM + G + TYN++I + G A M EM S G
Sbjct: 342 LAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGF 401
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P YN L++ L G + A ++ M++ G
Sbjct: 402 TPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNG 435
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 1/208 (0%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK-GDKPLAALNL 137
D+ Y V+ A R G+ ++ +L E+ R G P TYN++L V G+ G + L
Sbjct: 88 DVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVAL 147
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M+ G +P +T++ R G LD FF+++ +G +P VV Y ++ +
Sbjct: 148 LEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGK 207
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
AG +A + M G P+ TYN + + AG F+EA + M S+G PN
Sbjct: 208 AGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFT 267
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNT+++ N G++ EA + M + G
Sbjct: 268 YNTVMTAYANVGRVDEALALFDRMKKNG 295
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 133/306 (43%), Gaps = 41/306 (13%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILH---- 53
MI +GF T+N L+ G+ A+ +V + +K+ F+P SY+ +L
Sbjct: 396 MISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN---GFKPNDQSYSLLLQCYAK 452
Query: 54 -------------------------------ALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
A R+ + +E +Q++ +GY PD++
Sbjct: 453 GGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVI 512
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+N ++ + G + + D + +SG SPD TYN L+ + K ++ A +L +K
Sbjct: 513 FNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLK 572
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
P V+ + T+++G + G + + EM G P VV Y ++ Y +
Sbjct: 573 SSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFN 632
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+++ + MI P TY ++ +C A ++DEA + E+ N + + + L
Sbjct: 633 EAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLSEISDTDQNFDQKLQHMLE 692
Query: 263 SNLRNA 268
+ +++A
Sbjct: 693 ARIKDA 698
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 117/265 (44%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G A T+N L T G A K ++ L P +YN ++ A
Sbjct: 221 MEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLL---PNTFTYNTVMTAYAN 277
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ +M GY P++ TYN++ + + +L+EM RSG +P+ T
Sbjct: 278 VGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVT 337
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N +L V GK +LN MK G + S + TL+ R G+ +DEM
Sbjct: 338 WNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMI 397
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P + Y ++ G+ AQ + M+ G PN +Y+ +++ + G
Sbjct: 398 SSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAA 457
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
++ KE+ P++++ TLV
Sbjct: 458 GIESIEKEVYVGTIFPSWVILRTLV 482
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 134 ALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEMA-NKGCMPDVVCYTVM 191
AL LL + G D + L ++ L R G D DEM G DV YT +
Sbjct: 38 ALALLRWASDEGAADAAALEM--VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTV 95
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK-FDEACTMMKEMESRG 250
+ + AG E+A LF + +G +P + TYN ++ + G+ + +++EM + G
Sbjct: 96 LHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAG 155
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +T+++ G L +A + +G
Sbjct: 156 VEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARG 190
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 6/291 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G FN L +C G V A +V+R +++ +P + +Y I++ +
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVEN---GHQPNEVTYGTIVNGMCK 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M + D++ Y ++ + G + L EM G P+ T
Sbjct: 58 MGDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLT 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ K A LL M E DP V+ F L++ + G + + + EM
Sbjct: 118 YNCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREML 177
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ PD + Y +I + L+ A+ +FD M++KG PNV T N++I G C A + D
Sbjct: 178 GRNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVD 237
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
+ ++ EM RG P+ + YNTL+ AG L A ++ + M+ + ++I
Sbjct: 238 DGIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRWI 288
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%)
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M KGC DVV + ++ G + +A+ L D M+ G PN TY +++ G C G
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D A ++++M+ + ++Y ++ L G ++A + M +KG + ++++
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLT 117
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 13/292 (4%)
Query: 7 PTTARTFNILICTCGEVGLAR--KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P A ++ CGE + VV ++ L +P +Y I+ A R+ ++
Sbjct: 167 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGL---QPNVVTYTTIVDAFCKARELRMA 223
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M G P++LT+ ++ + GK L +H ++DE G++P +YN+
Sbjct: 224 CAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE----GWAPSTISYNV 279
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L AL+ N MK P+ ++TL+DG S AG+LD ++EM + G
Sbjct: 280 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 339
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+VV YT MI ++A+ L D M+ PN T+N++I C G+ A
Sbjct: 340 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 399
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M GC+PN YN L+ L G +A ++ M+ G + LV+
Sbjct: 400 NVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVT 451
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 10/270 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG-IRQYKLIEWVYQQMSDEG 75
+C G V AR + + P + SYNA++HAL G R +++ V +M G
Sbjct: 149 MCKLGRVEEARGFLAETV--------PVQASYNAVVHALCGEFRMWEVFS-VVNEMVQRG 199
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
P+++TY ++ A + +L +L M G +P+ T+ L+ + K AL
Sbjct: 200 LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDAL 259
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++ + M + G+ PS + + L+ GL G+L FF+ M +P+ Y+ ++ +
Sbjct: 260 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGF 319
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
AG+L+ A +++ M + G PNV Y +MI C FD+A +++ +M C PN
Sbjct: 320 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT 379
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +NTL+ L + G++ A V M G
Sbjct: 380 VTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 31/296 (10%)
Query: 21 GEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
G A + ++ F ++ R P YN +L ALL + VY M G P+
Sbjct: 44 ARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPN 103
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD------------------------- 114
+ TYN+++ A + ++D ++LDEM R G PD
Sbjct: 104 VYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA 163
Query: 115 -----FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
+YN ++H L + +++N M + G P+V+ +TT++D +A L
Sbjct: 164 ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMA 223
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
M + GC P+V+ +T ++ + G++ A ++ M+ +G P+ +YN +IRG
Sbjct: 224 CAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRG 283
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C G A M+ PN Y+TLV NAG L A + M G
Sbjct: 284 LCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 339
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G+ + ++N+LI +G + ++ F K P +Y+ ++
Sbjct: 265 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 324
Query: 61 YKLIEWVYQQMSDEGYAPDILTYN---IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +M G P+++ Y V+C K DQ L+D+M P+ T
Sbjct: 325 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM---MFDQAESLIDKMLMDNCPPNTVT 381
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L + ALN+ + M+ G P+ + L+ GL R GN EM
Sbjct: 382 FNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEML 441
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G +V Y +I + A L M+ +G P+ FT+N++I +C GK
Sbjct: 442 NNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVS 501
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ +M + C N + Y L+S L N GKL+ A + M+ +G
Sbjct: 502 IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 549
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ ++ C E+ +A ++ R + P ++ A++
Sbjct: 195 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVS---MGCTPNVLTFTALVKGFFE 251
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M DEG+AP ++YN+++ +G L + M R+ P+ T
Sbjct: 252 DGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATT 311
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ A+ + N MK G P+V+ +T ++D L + D + D+M
Sbjct: 312 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 371
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C P+ V + +I G + +A ++F GM G PN TYN ++ G G
Sbjct: 372 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 431
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
+A M+ EM + G + + YNT+++ L
Sbjct: 432 DAFAMVIEMLNNGFELSLVTYNTVINCL 459
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 112/256 (43%), Gaps = 37/256 (14%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ----FHRLLDEMGRSGFSPDFHTYN 119
+++ Q+M G A + A R G D+ F+R D R P YN
Sbjct: 17 VQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD---PGVRVYN 73
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL L + + A + + ++M++ G DP+V + L+ L + +DA + DEM+ K
Sbjct: 74 HLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRK 133
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQ------------------------------DLFD 209
GC PD V + +++ G +E+A+ + +
Sbjct: 134 GCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVN 193
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M+ +G PNV TY +++ FC A + AC ++ M S GC PN L + LV G
Sbjct: 194 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 253
Query: 270 KLAEAHEVIRHMVEKG 285
K+ +A + MV++G
Sbjct: 254 KVHDALSMWHWMVDEG 269
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M N A T++ L+ G + + + K +P Y ++ L
Sbjct: 300 MKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMM 359
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGFSPDFH 116
+ E + +M + P+ +T+N + +C R+G+ L+ FH M R+G P+
Sbjct: 360 FDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFH----GMRRNGCHPNDR 415
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN LLH L + A ++ M GF+ S++ + T+++ L + M
Sbjct: 416 TYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM 475
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD + +I +Y G++ A L M NV Y +I C GK
Sbjct: 476 MVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKL 535
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVE 283
A + +M G PN +N LV + N G + H + +++VE
Sbjct: 536 SNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIH-LFKYIVE 582
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 134/279 (48%), Gaps = 2/279 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F LI G+ L K +E F + FN FR + S+N +L+ L+ Q+ ++QQ
Sbjct: 119 FVALIQHYGKAHLVEKGIELFHQMPSFNCFRTLQ-SFNVLLNTLVDCDQFSKASEIFQQA 177
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ + P+ ++YNI++ + G +Q L DEM G P TYN L VL + +
Sbjct: 178 YEMDFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEM 237
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L +M E G P+ + + LM+G G K +M GC V Y V+
Sbjct: 238 DTALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFHGCKLRPVNYGVL 297
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+T G +++ + L + M + P+V TYN ++ C GK +A ++ +M+ GC
Sbjct: 298 MTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGC 357
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+PN Y ++ NAG A +++ M+ G Y HL
Sbjct: 358 DPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHL 396
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 90/191 (47%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L + GF + +Y+ L++ L + + A +L H++ + F L+
Sbjct: 68 LFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYG 127
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A ++ F +M + C + + V++ + + + KA ++F PN
Sbjct: 128 KAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSV 187
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+YN MI+G+ G +++AC + EM +G P+ + YN+ + L G++ A + ++M
Sbjct: 188 SYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNM 247
Query: 282 VEKGKYIHLVS 292
EKG + + V+
Sbjct: 248 TEKGHHPNAVT 258
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 91/215 (42%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ ++G+ +Y+ ++ R + + +L + + + L+ G
Sbjct: 68 LFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALIQHYG 127
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L + M ++ F L++ L F + P+ V
Sbjct: 128 KAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMDFRPNSV 187
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +MI +I G E+A +LFD M+ KG P+V TYNS + C G+ D A + K M
Sbjct: 188 SYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNM 247
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+G +PN + Y L+ GK EA +++ M
Sbjct: 248 TEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDM 282
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 102/253 (40%), Gaps = 42/253 (16%)
Query: 1 MIENGFPTTARTFNI---LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G + T+N ++C GE+ A + + + P +Y ++
Sbjct: 212 MLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEK---GHHPNAVTYALLMEGWCF 268
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I +YK + + M G + Y ++M + G +D+ LL+EM + PD T
Sbjct: 269 IGKYKEAKKLMFDMEFHGCKLRPVNYGVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVT 328
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL++ L K K A +L M+ G DP+ + ++DG AG+ D
Sbjct: 329 YNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAGDFDG--------- 379
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
A + + M+ G P++ T+ S++ G D
Sbjct: 380 --------------------------AMKILNAMLMSGHYPHLKTFASLVVGLLKGENND 413
Query: 238 E-ACTMMKEMESR 249
+ C +++EME R
Sbjct: 414 DYVCFVLEEMEKR 426
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 66/155 (42%)
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P AL L + E GF +++L+ L+R+ +A + + N+ + +
Sbjct: 62 PCEALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVA 121
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I Y A +EK +LF M + + ++N ++ +F +A + ++
Sbjct: 122 LIQHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYEMD 181
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + YN ++ G +A + M+EKG
Sbjct: 182 FRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKG 216
>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
Length = 761
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 44/332 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M++NG RT+ ++ C+ G+ +G +KV ++ P +Y +L
Sbjct: 257 MVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPD--GLEPDIATYCTLLQ 314
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
+ + M G PD YNI++CA + GK+D+ + +M + G +P
Sbjct: 315 GYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNP 374
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP------SVLH--------------- 152
D TY ++ +L K + A+ M + G P S++H
Sbjct: 375 DAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 434
Query: 153 --------------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
F +++D + G + + FD M G PD++ Y+ +I Y A
Sbjct: 435 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 494
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G++++A L GM++ G PN TY ++I G+C + +A + KEMES G +P+ + Y
Sbjct: 495 GKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITY 554
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
N ++ L + A A E+ + E G I L
Sbjct: 555 NIILQGLFQTRRTAAAKELYVRITESGTQIEL 586
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 111/224 (49%), Gaps = 5/224 (2%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +M D +PD++TY+ ++ A + +D+ +L M ++G P+ TY ++H
Sbjct: 218 TYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYC 277
Query: 127 KGDKPLAALNLLNHMKE-----VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+P A+ L ++ G +P + + TL+ G + G L D M G
Sbjct: 278 SSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGI 337
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD Y ++I +Y G++++A +F M +G P+ TY ++I C +G+ ++A
Sbjct: 338 HPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAML 397
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++M G +P +VYN+L+ L K A E+I M+++G
Sbjct: 398 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G A T+ +I C G V A E+ I L P YN+++H L
Sbjct: 367 MRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL---SPGNIVYNSLIHGLCT 423
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E + +M D G + + +N ++ + + G++ + +L D M R G PD T
Sbjct: 424 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 483
Query: 118 YNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
Y+ L+ + GK D+ A+ LL+ M VG P+ + + TL++G + + F
Sbjct: 484 YSTLIDGYCLAGKMDE---AMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFK 540
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM + G PD++ Y +++ A++L+ + G + TYN ++ G C
Sbjct: 541 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 600
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
D+A M + + +N ++ L G+ EA ++
Sbjct: 601 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDL 643
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 10/207 (4%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV-- 144
+CA R D +L M PD + ILL L ++ AL L + M +
Sbjct: 132 LCADKRTS--DAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRG 189
Query: 145 -GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P V+ +TT+++G + G+ + EM ++ PDVV Y+ +I + ++K
Sbjct: 190 GGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDK 249
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL-----VY 258
A ++ M+ G +PN TY S++ G+C +G+ EA +K++ S G P+ L Y
Sbjct: 250 AMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATY 309
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
TL+ G L H ++ MV G
Sbjct: 310 CTLLQGYATKGALVGMHALLDLMVRNG 336
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/313 (22%), Positives = 127/313 (40%), Gaps = 17/313 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 437 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCL 493
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G P+ +TY ++ ++ ++ L EM SG SPD T
Sbjct: 494 AGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIIT 553
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 554 YNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLC 613
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G +A+DLF + G +PN +TY M G +
Sbjct: 614 LMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLE 673
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK---------GKYI 288
E + ME GC + + N +V L G++ A + + EK +I
Sbjct: 674 ELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFI 733
Query: 289 HLVS--KFKRYKR 299
L+S K++ Y R
Sbjct: 734 DLLSGGKYQEYHR 746
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 120/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG L++ RL M
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAML 202
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 203 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRVD 262
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG + TY ++I
Sbjct: 263 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLI 322
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 323 DGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 380
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 126/272 (46%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI T E G R +E + ++ R ++ +L L+ ++ +KL+ +
Sbjct: 73 FSGLITTYLESGFLRDAIECYRLTREHKLRVPFDTCKKVLEHLMKLKYFKLVWGFXXXIX 132
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
G +NI+M + G + + D + + G P +YN L++ +
Sbjct: 133 XXGXXXXXXFFNILMHRFCKDGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLN 192
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
L + M G P V ++ L++GL + +D FDEM KG P+ V +T +I
Sbjct: 193 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLI 252
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G ++ A +++ M+++ LP++ TYN++I G C G +A ++ EM +G
Sbjct: 253 DGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLK 312
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ + Y TL+ G L A E + M+++
Sbjct: 313 XDKITYTTLIDGCCKEGDLDAAFEHRKRMIQE 344
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 6/283 (2%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
FNIL+ C G++ +A+ V + K + RP SYN +++ + + +
Sbjct: 143 FNILMHRFCKDGDIRIAQSVFDAIAK---WGLRPSVVSYNTLMNGYIRLGDLNEGFRLKS 199
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M G PD+ TY++++ + K+D + L DEM G P+ T+ L+ K
Sbjct: 200 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNG 259
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ + M P ++ + TL+ GL + G+L DEM+ KG D + YT
Sbjct: 260 RVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYT 319
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G+L+ A + MI + + Y ++I G C G+ +A M++EM S
Sbjct: 320 TLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSV 379
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G P+ Y +++ G + + ++++ M G +V+
Sbjct: 380 GLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVT 422
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 74/163 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q H L+DEM G D TY L+
Sbjct: 267 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTLIDGCC 326
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AA M + + +T L+ GL + G + EM + G PD
Sbjct: 327 KEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTX 386
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G P+V TYN ++ G
Sbjct: 387 TYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 136/285 (47%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+I+ G T+NI I E G + V R + P +YN ++ L
Sbjct: 212 VIQRGMSINLFTYNIWIRGLCEAGRLPEAV-RLVDGMRAYAVPDVVTYNTLIRGLCKKSM 270
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M ++G PD TYN ++ ++ + + LL + GF PD TY
Sbjct: 271 PQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCS 330
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L AL L N + G P ++ + +L+ GL G + +EMA +G
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+ Y ++I G + A + + I KG LP+VFT+N++I G+C K D A
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 450
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M G P+ + YN++++ L AGK+ E +E + M+ KG
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 495
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 143/283 (50%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYK 62
GF T+ LI G + +E F +++ +P YN+++ L G+ +
Sbjct: 320 GFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHA 379
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L V +M++EG PDI TYNIV+ ++G + ++++ G+ PD T+N L+
Sbjct: 380 L--QVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLI 437
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K +AL L+ M E G P + + ++++GL +AG ++ F EM KGC
Sbjct: 438 DGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCH 497
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ + Y ++I ++ + ++E+A + M +G P+ ++N++I GFC G + A +
Sbjct: 498 PNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLL 557
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++E +G + +NTL+ + A ++ M+ KG
Sbjct: 558 FQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKG 600
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 121/250 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN I+ I + + + +G+ PD +TY ++ G +++ L
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+E G PD YN L+ L L AL ++N M E G P + + +++GL +
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GN+ ++ KG +PDV + +I Y +L+ A L + M G P+ T
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YNS++ G C AGK +E +EM +GC+PN + YN L+ N + K+ EA +VI M
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527
Query: 283 EKGKYIHLVS 292
++G + VS
Sbjct: 528 QEGLHPDAVS 537
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 130/330 (39%), Gaps = 65/330 (19%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G R V+ F + LF P +YNAI+ AL+ + VY +M G +PD+
Sbjct: 61 ARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGVSPDL 120
Query: 81 LTYNI-------------------------------VMCAKYRLGKLDQFHRLLDEMGRS 109
T+ I V+C Y G +L D+M +
Sbjct: 121 HTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHT 180
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD---------------------- 147
P+ +N +LH L K L A LL + + G
Sbjct: 181 HVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEA 240
Query: 148 ------------PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
P V+ + TL+ GL + ++ M N+GC+PD Y +I Y
Sbjct: 241 VRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGY 300
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+++A +L + KG +P+ TY S+I G C G + A + E +++G P+
Sbjct: 301 CKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDI 360
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+VYN+LV L G + A +V+ M E+G
Sbjct: 361 VVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +T+NI+I C G + A V+ I + + P ++N ++
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI---MKGYLPDVFTFNTLIDGYCK 442
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M + G APD +TYN V+ + GK+++ + EM G P+ T
Sbjct: 443 RLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPIT 502
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ + +K A ++ M + G P + F TL+ G R G+L+ F ++
Sbjct: 503 YNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLE 562
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG + +I ++ + A+ +FD M++KG + +TY +I G C D
Sbjct: 563 EKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVD 622
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM +G P+ + ++++L ++ +A +I MV+ G
Sbjct: 623 RAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIG 670
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 14/289 (4%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I G+ TFN LI C ++ A ++VER + + P +YN++L+ L
Sbjct: 422 IMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWE---YGIAPDTITYNSVLNGLCKA 478
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + +Q+M +G P+ +TYNI++ R K+++ +++ +M + G PD ++
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L++ + A L ++E G+ + F TL+ S N+ + FDEM +
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 598
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG D Y V+I +++A MI KG +P++ T+ +I + + +
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 658
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK--LAEAHEVIRHMVEKG 285
A ++ M G P +V + NA K +A ++ +++KG
Sbjct: 659 AVGIIHIMVKIGVVPE------VVDTILNADKKEIAAPKILVEDLMKKG 701
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 6/149 (4%)
Query: 146 FDPSVLH--FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
P+ +H + + +RAG L F+ M C P Y ++ + + A ++
Sbjct: 44 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 103
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A ++ M+ G P++ T+ +R FC+ + A +++ + RG + Y T+V
Sbjct: 104 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGA----VAYCTVVC 159
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L G +A ++ M+ + +L +
Sbjct: 160 GLYAHGHTHDARQLFDQMLHTHVFPNLAA 188
>gi|302809819|ref|XP_002986602.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
gi|300145785|gb|EFJ12459.1| hypothetical protein SELMODRAFT_124189 [Selaginella moellendorffii]
Length = 445
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 138/281 (49%), Gaps = 12/281 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++N LI C+ G + AR+ ++ K + P + +YNA+ G+ + L++ +
Sbjct: 85 SYNTLIDALCSSGRIQEAREELQAMAKRGV---APNRVTYNAMA---TGLGKAGLLDEAF 138
Query: 69 Q---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ M G+A +T+N V+ + G+ D+ ++++ M P+ T N++LH
Sbjct: 139 ELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILHAF 198
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K +P AL + + M E+GF P+++ F L++ +D+ + MA+ C P+
Sbjct: 199 CKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNF 258
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y++M+ + G + +A+ + ++ G PN+ N+ + G C G+ D A +
Sbjct: 259 VTYSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTV 318
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
M GC N YN+LV G++ EA V+ M+ +G
Sbjct: 319 MAEEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGS 359
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 135/286 (47%), Gaps = 8/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF TA TFN ++ C G A KV+E + L N P + N ILHA
Sbjct: 144 MESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETML---LRNIEPNILTLNLILHAFCK 200
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M + G+ P I+T+N ++ ++D +LL+ M S P+F T
Sbjct: 201 AARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETMAHSKCKPNFVT 260
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+I++ + + + A L + G+ P++L + GL + G +D F MA
Sbjct: 261 YSIMVQKFAEMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMA 320
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC + Y ++ + G +++A+ + + MI +G LP+ TY+ +I+G C AG+ +
Sbjct: 321 EEGCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYSVLIQGLCSAGQIE 380
Query: 238 EACTMMKEMES--RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A +M ++ P+ + L+ L G++ A V+ M
Sbjct: 381 HAFMVMLQVTRAVESARPDPATFVKLIEKLCELGEMDRAALVLERM 426
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 11/276 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL--GIRQYKLIEW 66
T+ L+ C GE A+++VE F + + +LH L+ G + ++
Sbjct: 16 TYGTLVHGHCLAGEFDEAKRLVEEFKDTGM------SPGSLVVLHNLMLKGFSEAGFVDE 69
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ P+ ++YN ++ A G++ + L M + G +P+ TYN + LG
Sbjct: 70 AKSHLHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLG 129
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A L+ M+ GF + + F +++ L ++G D + M + P+++
Sbjct: 130 KAGLLDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNIL 189
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+++ ++ A E+A + D M+ G P + T+N+++ FC + D A +++ M
Sbjct: 190 TLNLILHAFCKAARPEEALGMTDIMVEMGFCPTIVTFNALLELFCNTDQMDSAAKLLETM 249
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
C PNF+ Y+ +V G++ EA + +V
Sbjct: 250 AHSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLV 285
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 3/205 (1%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN-LLNH 140
TY ++ G+ D+ RL++E +G SP + +L +++ KG ++ +H
Sbjct: 16 TYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPG--SLVVLHNLMLKGFSEAGFVDEAKSH 73
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+ + P+ + + TL+D L +G + + MA +G P+ V Y M T AG
Sbjct: 74 LHRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRGVAPNRVTYNAMATGLGKAGL 133
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A +L M + G T+N ++ C +G+ DEAC +M+ M R PN L N
Sbjct: 134 LDEAFELMGVMESAGFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNL 193
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ A + EA + MVE G
Sbjct: 194 ILHAFCKAARPEEALGMTDIMVEMG 218
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 34/99 (34%)
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRG------------------------------ 250
FTY +++ G C+AG+FDEA +++E + G
Sbjct: 15 FTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHNLMLKGFSEAGFVDEAKSHL 74
Query: 251 ----CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PN + YNTL+ L ++G++ EA E ++ M ++G
Sbjct: 75 HRMDCKPNSVSYNTLIDALCSSGRIQEAREELQAMAKRG 113
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 136/274 (49%), Gaps = 6/274 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N+LI C G+V A ++ +P +Y +L +L G ++K +E +
Sbjct: 323 TYNVLINAMCNEGDVDEALNILSNLPS---HGCKPDAVTYTPVLKSLCGSERWKEVEELL 379
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M+ APD +T+N ++ + + G +D+ ++D M G D TY+ +L L
Sbjct: 380 AEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDV 439
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A+ LL+ +K G P + +TT++ GL + + EM C PD V +
Sbjct: 440 GRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTF 499
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ S G +++A + + M G P++ TYN +I G C D+A ++ +++S
Sbjct: 500 NTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQS 559
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
GC P+ + +NTL+ L + +A +++ +M+
Sbjct: 560 CGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM 593
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 137/281 (48%), Gaps = 9/281 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N ++ C G + AR+++ F P ++N ++ AL +
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGM------PFPPDTFTFNPLIRALCVRGRI 267
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V+ M G +P ++TY+I++ A + Q LLDEM G PD TYN+L
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVL 327
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + ALN+L+++ G P + +T ++ L + + EM + C
Sbjct: 328 INAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNC 387
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD V + ++TS G +++A ++ D M G + ++ TY+S++ G C G+ D+A
Sbjct: 388 APDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVE 447
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++ ++S GC P+ + Y T++ L + + A E++ M+
Sbjct: 448 LLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEML 488
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 113/218 (51%), Gaps = 3/218 (1%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G + ++TYN ++ R G+++ RL++ M F PD T+N L+ L + A
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDA 270
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L + + M G PSV+ ++ L+D + DEM KGC PD+V Y V+I +
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G++++A ++ + + G P+ TY +++ C + ++ E ++ EM S C P+
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +NT+V++L G + A EV+ HM E G +V+
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVT 428
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 139/293 (47%), Gaps = 2/293 (0%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M+ G + T++IL+ TC E G R+ + + + P +YN +++A+
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGY-RQAMALLDEMRAKGCEPDIVTYNVLINAMCNEG 335
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + G PD +TY V+ + + + LL EM + +PD T+N
Sbjct: 336 DVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFN 395
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ L + A+ +++HM E G ++ +++++DGL G +D + +
Sbjct: 396 TIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC PD + YT ++ + + E+A++L M+ P+ T+N+++ C G D A
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++M GC+P+ + YN ++ L N + +A E++ + G +V+
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVT 568
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 132/290 (45%), Gaps = 6/290 (2%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
FP TFN LI C G + A V + + P +Y+ +L A Y+
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHR---GCSPSVVTYSILLDATCKESGYR 303
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ +M +G PDI+TYN+++ A G +D+ +L + G PD TY +L
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVL 363
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L ++ LL M P + F T++ L + G +D D M+ GC+
Sbjct: 364 KSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCV 423
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
D+V Y+ ++ G ++ A +L + + G P+ Y ++++G C +++ A +
Sbjct: 424 ADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M EM C P+ + +NT+V++L G + A V+ M E G +V+
Sbjct: 484 MAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVT 533
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 127/318 (39%), Gaps = 33/318 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M N TFN ++ + + GL + +E +Y++IL L + +
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ G PD + Y V+ + ++ L+ EM S PD T+N
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + A+ ++ M E G P ++ + ++DGL +D ++ + G
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+V + ++ E A+ L M+ P+ T+N++I C G +A
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAI 621
Query: 241 TMMKEMESRGCNPN---------------------------------FLVYNTLVSNLRN 267
+K M GC PN + YNT++SNL
Sbjct: 622 ETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTK 681
Query: 268 AGKLAEAHEVIRHMVEKG 285
AGK+ EA +++R MV G
Sbjct: 682 AGKMEEALDLLRVMVSNG 699
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 130/288 (45%), Gaps = 8/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ + P TFN ++ + + GL + + + P +YN I+ G+
Sbjct: 487 MLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIID---GLCN 543
Query: 61 YKLIEWVYQQMSDE---GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I+ + +SD G PDI+T+N ++ + + + +L+ M RS PD T
Sbjct: 544 ESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELT 603
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ L + A+ L M E G P+ ++ ++D L +AG A M
Sbjct: 604 FNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT 663
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N PD++ Y +I++ AG++E+A DL M++ G P+ TY S+ G C D
Sbjct: 664 NG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTD 721
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++ ++ G +P+ YN ++ + A + HMV G
Sbjct: 722 RAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSG 769
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 120/285 (42%), Gaps = 2/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG T+N +I +E + +P ++N +L L G+ +
Sbjct: 522 MSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDR 581
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + M PD LT+N V+ + + G L Q L M +G P+ TY+I
Sbjct: 582 WEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSI 641
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K AAL LL+ M P ++ + T++ L++AG ++ M + G
Sbjct: 642 VVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNG 699
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD Y + ++A + + G P+ YN ++ GFC + D A
Sbjct: 700 LCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAI 759
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC P+ Y L+ L G L EA ++ + G
Sbjct: 760 DCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLG 804
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 100/217 (46%), Gaps = 2/217 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ + P TFN +I + + GL + +E P ++Y+ ++ ALL +
Sbjct: 592 MMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGK 651
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + M++ PD++TYN V+ + GK+++ LL M +G PD TY
Sbjct: 652 AQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRS 709
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + + + D A+ +L +++ G P + ++ G R D F M + G
Sbjct: 710 LAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSG 769
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
CMPD Y +++ + G L++A+ L + + G L
Sbjct: 770 CMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVL 806
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 192 ITSYIAAGELEKAQDLFDGMITKG--QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+ S + GE+++A LFD M + G P V N +I+ C G+ +A + +
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDA---ERVFAAL 213
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G + + YNT+V+ AG++ +A +I M
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGM 245
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P ++YN +M RLG LD+ RL M
Sbjct: 120 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAML 179
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 180 ASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 239
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL D M KG P+ TY ++I
Sbjct: 240 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLI 299
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G A K + + +VY L+S L G+ +A +++R M+
Sbjct: 300 DGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLN 359
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 360 PDTGTYTMIINEF 372
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+E+ G+ + +NIL+H K A ++ + + + G PS + + TLM+G R
Sbjct: 106 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRL 165
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G LD M G PDV Y+V+I +++ A +LFD M+ KG +PN T+
Sbjct: 166 GVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTF 225
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++I G C G+ D A + K+M S+ P+ + YNTL+ L G L +AH++I M
Sbjct: 226 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSR 285
Query: 284 KG 285
KG
Sbjct: 286 KG 287
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 128/301 (42%), Gaps = 41/301 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 108 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSAVSYNTLMNGYIR 164
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM----------- 106
+ + M G PD+ TY++++ + K+D L DEM
Sbjct: 165 LGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVT 224
Query: 107 -----------GRSGFS-------------PDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GR + PD TYN L++ L K A +L++ M
Sbjct: 225 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMS 284
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + +TTL+DG + G L + + + D V YT +I+ G
Sbjct: 285 RKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSV 344
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A+ + M++ G P+ TY +I FC G + ++KEM+ G P+ + YN L+
Sbjct: 345 DAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLM 404
Query: 263 S 263
+
Sbjct: 405 N 405
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 78/163 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q H L+D+M R G PD TY L+
Sbjct: 244 IYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCC 303
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K ++A + + + +T L+ GL + G + EM + G PD
Sbjct: 304 KEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTG 363
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 364 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G+ S+ F LM + G++ + FD + G P V Y ++ YI G L+
Sbjct: 110 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLD 169
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M+ G P+V+TY+ +I G C K D+A + EM +G PN + + TL+
Sbjct: 170 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLI 229
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ A E+ + M+ + L++
Sbjct: 230 DGHCKNGRVDLAMEIYKQMLSQSLLPDLIT 259
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 57/114 (50%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F++E+ G + + +++ + G++ AQ +FD + G P+ +YN+++ G+
Sbjct: 104 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYI 163
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L K+ +A E+ M+ KG
Sbjct: 164 RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKG 217
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 118/238 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 139 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A L D M KG P+ TY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L S L G+ +A +++R M+ G
Sbjct: 319 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVG 376
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 127 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 184 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++ G C G+
Sbjct: 304 VKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSV 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 364 DAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 418
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 137/292 (46%), Gaps = 13/292 (4%)
Query: 7 PTTARTFNILICTCGEVGLAR--KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P A ++ CGE + VV ++ L +P +Y I+ A R+ ++
Sbjct: 220 PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGL---QPNVVTYTTIVDAFCKARELRMA 276
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M G P++LT+ ++ + GK L +H ++DE G++P +YN+
Sbjct: 277 CAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDE----GWAPSTISYNV 332
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L AL+ N MK P+ ++TL+DG S AG+LD ++EM + G
Sbjct: 333 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 392
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+VV YT MI ++A+ L D M+ PN T+N++I C G+ A
Sbjct: 393 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 452
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M GC+PN YN L+ L G +A ++ M+ G + LV+
Sbjct: 453 NVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVT 504
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 132/270 (48%), Gaps = 10/270 (3%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG-IRQYKLIEWVYQQMSDEG 75
+C G V AR + + P + SYNA++HAL G R +++ V +M G
Sbjct: 202 MCKLGRVEEARGFLAETV--------PVQASYNAVVHALCGEFRMWEVFS-VVNEMVQRG 252
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
P+++TY ++ A + +L +L M G +P+ T+ L+ + K AL
Sbjct: 253 LQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDAL 312
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++ + M + G+ PS + + L+ GL G+L FF+ M +P+ Y+ ++ +
Sbjct: 313 SMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGF 372
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
AG+L+ A +++ M + G PNV Y +MI C FD+A +++ +M C PN
Sbjct: 373 SNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNT 432
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +NTL+ L + G++ A V M G
Sbjct: 433 VTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 126/296 (42%), Gaps = 31/296 (10%)
Query: 21 GEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
G A + ++ F ++ R P YN +L ALL + VY M G P+
Sbjct: 97 ARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPN 156
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD------------------------- 114
+ TYN+++ A + ++D ++LDEM R G PD
Sbjct: 157 VYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLA 216
Query: 115 -----FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
+YN ++H L + +++N M + G P+V+ +TT++D +A L
Sbjct: 217 ETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMA 276
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
M + GC P+V+ +T ++ + G++ A ++ M+ +G P+ +YN +IRG
Sbjct: 277 CAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRG 336
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C G A M+ PN Y+TLV NAG L A + M G
Sbjct: 337 LCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 392
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 127/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G+ + ++N+LI +G + ++ F K P +Y+ ++
Sbjct: 318 MVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGD 377
Query: 61 YKLIEWVYQQMSDEGYAPDILTYN---IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +M G P+++ Y V+C K DQ L+D+M P+ T
Sbjct: 378 LDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM---MFDQAESLIDKMLMDNCPPNTVT 434
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L + ALN+ + M+ G P+ + L+ GL R GN EM
Sbjct: 435 FNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEML 494
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G +V Y +I + A L M+ +G P+ FT+N++I +C GK
Sbjct: 495 NNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVS 554
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ +M + C N + Y L+S L N GKL+ A + M+ +G
Sbjct: 555 IAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 602
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 43/291 (14%)
Query: 42 RPFKNSYNAILHALLGIRQYKL------IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK 95
RP S ++ H +R+ +++ Q+M G A + A R G
Sbjct: 42 RPDPGSGDSARHHEATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGS 101
Query: 96 LDQ----FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
D+ F+R D R P YN LL L + + A + + ++M++ G DP+V
Sbjct: 102 ADRALKTFYRASDLGCRD---PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVY 158
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ------ 205
+ L+ L + +DA + DEM+ KGC PD V + +++ G +E+A+
Sbjct: 159 TYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET 218
Query: 206 ------------------------DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+ + M+ +G PNV TY +++ FC A + AC
Sbjct: 219 VPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACA 278
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ M S GC PN L + LV GK+ +A + MV++G +S
Sbjct: 279 ILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTIS 329
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ ++ C E+ +A ++ R + P ++ A++
Sbjct: 248 MVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVS---MGCTPNVLTFTALVKGFFE 304
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M DEG+AP ++YN+++ +G L + M R+ P+ T
Sbjct: 305 DGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATT 364
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ A+ + N MK G P+V+ +T ++D L + D + D+M
Sbjct: 365 YSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 424
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C P+ V + +I G + +A ++F GM G PN TYN ++ G G
Sbjct: 425 MDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHK 484
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
+A M+ EM + G + + YNT+++ L
Sbjct: 485 DAFAMVIEMLNNGFELSLVTYNTVINCL 512
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 119/288 (41%), Gaps = 10/288 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M N A T++ L+ G + + + K +P Y ++ L
Sbjct: 353 MKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMM 412
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGFSPDFH 116
+ E + +M + P+ +T+N + +C R+G+ L+ FH M R+G P+
Sbjct: 413 FDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFH----GMRRNGCHPNDR 468
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN LLH L + A ++ M GF+ S++ + T+++ L + M
Sbjct: 469 TYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRM 528
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+G PD + +I +Y G++ A L M NV Y +I C GK
Sbjct: 529 MVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKL 588
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVE 283
A + +M G PN +N LV + N G + H + +++VE
Sbjct: 589 SNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIH-LFKYIVE 635
>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
Length = 1091
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 125/239 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN+++ L+ + E ++ +M G PD TYN+++ A + ++++ ++ EM
Sbjct: 768 SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEM 827
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G+ + TYN ++ L K + A++L ++ GF P+ + L+DGL ++G +
Sbjct: 828 HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKM 887
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F+EM GC P+ Y +++ + AG E LF+ M+ +G P++ +Y +
Sbjct: 888 VDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTIL 947
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C AG+ ++ +++ G P+ +VYN L+ L + ++ EA + M +KG
Sbjct: 948 IDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKG 1006
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ L+ CG+ G ++ VVE + + SY A++ AL + + V+ +M
Sbjct: 313 TYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEM 372
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++G +P+ +YN ++ + D+ L + M G SP+ +T+ + ++ GK +
Sbjct: 373 KEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQS 432
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L A+ HMK G P V ++ L+ +G L K F E+ G PD + YT+M
Sbjct: 433 LKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMM 492
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I A + ++A + F M+ G +P+V NS+I GK +EA + +++
Sbjct: 493 IKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKI 552
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
P YNTL+S L GK+ E +++ M
Sbjct: 553 EPTNGTYNTLLSGLGREGKVKEVMQLLEEMT 583
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 110/215 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
VY+ M ++G +P + TY+++M A + +D LL+EM G P+ ++Y I + VLG
Sbjct: 193 VYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLG 252
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A ++L M++ G P V+ T ++ L AG L K F +M PD V
Sbjct: 253 QAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRV 312
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ +G+ + ++++ M+ G N+ +Y +++ C G+ DEA + EM
Sbjct: 313 TYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEM 372
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ +G +P YN+L+S A A E+ HM
Sbjct: 373 KEKGMSPEQYSYNSLISGFLKADMFDRALELFNHM 407
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 128/265 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + ++ + F P +Y +L LL +
Sbjct: 827 MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGK 886
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ +M + G P+ YNI++ G + +L ++M G +PD +Y I
Sbjct: 887 MVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTI 946
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + L + E+G +P ++ + L+DGL ++ ++ F+EM KG
Sbjct: 947 LIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKG 1006
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P++ Y +I AG+ +A +++ ++ KG P+VFTYN++IRG+ ++G D A
Sbjct: 1007 IIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAY 1066
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
+M GC PN Y L + L
Sbjct: 1067 AAYGQMIVGGCQPNSSTYMQLPNQL 1091
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 137/281 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++N LI + L + F + K P + +YN IL A+ + + +
Sbjct: 761 GVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEM 820
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V ++M +GY +TYN ++ + +L+Q L + GFSP TY LL
Sbjct: 821 LKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDG 880
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K K + A NL N M E G +P+ + L++G AGN + F++M +G PD
Sbjct: 881 LLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPD 940
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ YT++I + AG L F + G P++ YN +I G + + +EA ++
Sbjct: 941 IKSYTILIDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFN 1000
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ +G PN YN+L+ +L AGK AEA ++ ++ KG
Sbjct: 1001 EMKKKGIIPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKG 1041
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 129/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G A T+N LI + G + +E + P +Y+ ++ A R
Sbjct: 162 MREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRD 221
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ W+ +M G P++ +Y I + + + D+ + +L +M SG PD T+ +
Sbjct: 222 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTV 281
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ VL + A + MK P + + TL+D +G+ + ++ M G
Sbjct: 282 IIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADG 341
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
++V YT ++ + G +++A +FD M KG P ++YNS+I GF A FD A
Sbjct: 342 YNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRAL 401
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M + G +PN + ++ +G+ +A + HM KG
Sbjct: 402 ELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 446
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 133/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G + RT+++L+ G+ V+ + + +P SY + L +
Sbjct: 197 MVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAAR 256
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D G PD++T+ +++ G+L + +M S PD TY
Sbjct: 257 FDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYIT 316
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G + + + N M G++ +++ +T ++D L + G +D FDEM KG
Sbjct: 317 LLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKG 376
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ Y +I+ ++ A ++A +LF+ M G PN +T+ I + +G+ +A
Sbjct: 377 MSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 436
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+G P+ N ++ +L +G+L A V + G
Sbjct: 437 QRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMG 481
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 129/266 (48%), Gaps = 2/266 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ G + K ++R+ K P + NA+L++L G + + + V+ ++ G +PD
Sbjct: 427 GKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDT 486
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TY +++ + K D+ +M SG PD N L+ L KG K A L +
Sbjct: 487 ITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHK 546
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+KE+ +P+ + TL+ GL R G + +EM P+++ Y ++ GE
Sbjct: 547 LKEMKIEPTNGTYNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGE 606
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A D+ M KG P++ +YN+++ G + +EA M +M+ + P++ T
Sbjct: 607 VNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMK-KILAPDYATLCT 665
Query: 261 LVSNLRNAGKLAEA-HEVIRHMVEKG 285
++ + G + EA H V ++++ G
Sbjct: 666 ILPSFVKNGLMKEALHTVKEYILKAG 691
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 140/340 (41%), Gaps = 41/340 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G N LI T + G + + F K K P +YN +L L +
Sbjct: 512 MVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREGK 571
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + ++M+ Y P+++TYN V+ + G+++ +L M G +PD +YN
Sbjct: 572 VKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNT 631
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV------------------GFDPSVLH---------- 152
+++ L K ++ A + MK++ G LH
Sbjct: 632 VMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAG 691
Query: 153 -------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F +LM+G+ + ++ F + +A++G + + +I + +A
Sbjct: 692 CNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAH 751
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF+ G +YNS+IRG D A + EM+ GC P+ YN ++ +
Sbjct: 752 QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 811
Query: 266 RNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ ++ E +V + M KG Y ++S + KR
Sbjct: 812 GKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKR 851
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G L L M +G S + +TYN L++ L K A+ + M E G PSV +
Sbjct: 150 GGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTY 209
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+ LM + ++D + +EM +G P+V YT+ I A ++A + M
Sbjct: 210 SVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMED 269
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+V T+ +I+ C AG+ +A + +M++ P+ + Y TL+ ++G
Sbjct: 270 SGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQS 329
Query: 274 AHEVIRHMVEKGKYIHLVS 292
EV MV G ++VS
Sbjct: 330 VVEVWNAMVADGYNDNIVS 348
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 36/207 (17%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
DF ++ H L K K L A L N K +G + +L+ GL +D + F
Sbjct: 731 DFFLCPLIRH-LCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLF 789
Query: 174 DEMANKGCMPD-----------------------------------VVCYTVMITSYIAA 198
EM GC PD V Y +I+ + +
Sbjct: 790 TEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKS 849
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
LE+A DL+ ++++G P TY ++ G +GK +A + EM GC PN +Y
Sbjct: 850 KRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIY 909
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N L++ R AG ++ MVE+G
Sbjct: 910 NILLNGHRIAGNTENVCQLFEKMVEQG 936
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 58/133 (43%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F T+ G+ G L + M G + Y +I + +G +A +++ M+
Sbjct: 139 FATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMV 198
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+V TY+ ++ F D ++ EME+RG PN Y + L A +
Sbjct: 199 EDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFD 258
Query: 273 EAHEVIRHMVEKG 285
EA+ ++ M + G
Sbjct: 259 EAYHILGKMEDSG 271
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 61/165 (36%), Gaps = 34/165 (20%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H+L P AL L P+ +H T ++C Y + M G
Sbjct: 71 VVHMLRSAPDPAEALELFTAAAR---QPTKVHTT------------ESCNYMLELMRAHG 115
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
G++ + DL + K NV T+ ++ G + G A
Sbjct: 116 ----------------RVGDMAQVFDLMQKQVVK---TNVGTFATIFGGVGVEGGLRSAP 156
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M G + N YN L+ L +G AEA EV + MVE G
Sbjct: 157 VALPVMREAGMSLNAYTYNGLIYFLVKSGFDAEAMEVYKAMVEDG 201
>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
Length = 734
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 148/287 (51%), Gaps = 5/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N LI +V A ++E ++ K +P ++N+++ L
Sbjct: 281 MSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI-VKPNVVTFNSVIQGLCD 339
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + + V M + G +++TYN+++ R+ K+ + L+DEM G PD T
Sbjct: 340 IGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFT 399
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL+ K + A +LL+ M++ G +P + H+ L+ + G ++ + F+EM
Sbjct: 400 YSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD 459
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N + DVV Y+ MI AG+L+ A++L ++ +G P+ TY+ +I F +G +
Sbjct: 460 NNFPL-DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDME 518
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A ++K+M + G P+ V+++L+ G++ + E+IR M+ K
Sbjct: 519 AANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITK 565
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 126/245 (51%), Gaps = 4/245 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLL 103
SYN +L AL + + + MS E + P+ ++Y ++M A DQ LL
Sbjct: 79 SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
M +G D TY L+ L + A+ L+ M E G +P+V+ +++L+ G ++
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + F EM+ KG PDVV YT +I S G+ +KA + D M+ +G PNV TY
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N +I C G EA ++K+M +G P+ + YNTL+ L + ++ EA ++ MV
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV- 317
Query: 284 KGKYI 288
+GK I
Sbjct: 318 RGKNI 322
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 123/254 (48%), Gaps = 4/254 (1%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP SY ++ AL R + + M G D++TY ++ ++D+
Sbjct: 112 RPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVE 171
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+ EM SG P+ Y+ LL K + + M E G +P V+ +T L+D L
Sbjct: 172 LMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLC 231
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G D M +G P+VV Y V+I G +++A + M KG P+V
Sbjct: 232 KVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVV 291
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCN---PNFLVYNTLVSNLRNAGKLAEAHEVI 278
TYN++I+G + DEA +++EM RG N PN + +N+++ L + G++ +A +V
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVR 350
Query: 279 RHMVEKGKYIHLVS 292
M E G ++LV+
Sbjct: 351 AMMEETGCMVNLVT 364
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 136/290 (46%), Gaps = 8/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ LI C EV A +++ +S P Y+++L
Sbjct: 141 MRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCES---GIEPNVVVYSSLLQGYCK 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + V+ +MS++G PD++ Y ++ + ++GK + H ++D M R G P+ T
Sbjct: 198 SGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVT 257
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L++ + K A+ +L M E G P V+ + TL+ GLS +D + +EM
Sbjct: 258 YNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV 317
Query: 178 NKGCM--PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ P+VV + +I G + +A + M G + N+ TYN +I G K
Sbjct: 318 RGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHK 377
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +M EM S G P+ Y+ L+ ++ A +++ M ++G
Sbjct: 378 VRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRG 427
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 4/284 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E+G ++ L+ + G V + F++ P Y ++ +L + +
Sbjct: 176 MCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGK 235
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K V M G P+++TYN+++ + G + + +L +M G +PD TYN
Sbjct: 236 AKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNT 295
Query: 121 LLHVLGKGDKPLAALNLLNHM---KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ L + A+ LL M K + P+V+ F +++ GL G + M
Sbjct: 296 LIKGLSDVLEMDEAMWLLEEMVRGKNI-VKPNVVTFNSVIQGLCDIGRMRQAFQVRAMME 354
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GCM ++V Y ++I + ++ KA +L D M + G P+ FTY+ +I+GFC + D
Sbjct: 355 ETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVD 414
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A ++ M RG P Y L+ + G + A + M
Sbjct: 415 RAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEM 458
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 6/204 (2%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL---GKGDKPLAALNLLNHMKEVGFDP 148
RL L + LLD + D +YN +L L G D+ A L ++ P
Sbjct: 57 RLLPLGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRP 113
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ + +T LM L D M + G DVV Y +I A E++KA +L
Sbjct: 114 NAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELM 173
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M G PNV Y+S+++G+C +G++++ + EM +G P+ ++Y L+ +L
Sbjct: 174 GEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKV 233
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
GK +AH V+ MV +G ++V+
Sbjct: 234 GKAKKAHGVMDMMVRRGLEPNVVT 257
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 128 FNILMHRFCKEGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMH 187
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P + FTTL+DG + G +D
Sbjct: 188 ASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVD 247
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A L M KG P+ TY ++I
Sbjct: 248 LAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLI 307
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 308 DGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 365
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 134/295 (45%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G + +A+ V + K + RP SYN ++ +
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITK---WGLRPSVVSYNTLMSGYIR 172
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D+ + L DEM G P T
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVT 232
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + GBL EM+
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMS 292
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 293 LKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 352
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + ++++ M G +V+
Sbjct: 353 DAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 407
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + PD++TYN ++ + G L Q H L+ EM G PD TY L+
Sbjct: 252 IYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCC 311
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G PD
Sbjct: 312 KEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTR 371
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ L M G +P+V TYN ++ G
Sbjct: 372 TYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T T+ + GEV R + E + + F P SY+ ++H L Q + +
Sbjct: 529 TLLNTYMDCVFKAGEVEKGRMIFEDI---RSYGFLPDVRSYSILIHGLTKAGQARETSNI 585
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M +G+A D YN V+ + GK+ + + +L+EM P TY ++ L K
Sbjct: 586 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 645
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
D+ A L K G + +V+ +++L+DG + G +D +EM KG P+V
Sbjct: 646 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 705
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ ++ + + A E+ +A F M PN +TY+ +I G C K+++A ++M+
Sbjct: 706 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 765
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN + Y T++S L G + +A+ + G
Sbjct: 766 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG 803
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 147/292 (50%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + GF AR +N ++ C G+V A +++E +K K +P +Y AI+ L
Sbjct: 589 MKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE-MKEKCV--QPTVATYGAIVDGLAK 645
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +L+EM + G +P+ +T
Sbjct: 646 IDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYT 705
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL MKE+ P+ ++ L++GL R + F+ +M
Sbjct: 706 WNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQ 765
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VV YT MI+ G + A LF+ G +P+ ++N++I G A +
Sbjct: 766 KQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAM 825
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
EA + +E RGC N +L+ L + L +A V + E K H
Sbjct: 826 EAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLREIAKSQH 877
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 37/259 (14%)
Query: 53 HALLGIRQYKL--IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
HA+L + L +E V ++M+ GY + A R +LD + M R
Sbjct: 115 HAVLPFLHHDLAALEKVLEEMAVLGYGLPNQACAHLAAALVRARRLDDAVLAVAVMRRLK 174
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR-------- 162
F P F Y +L+ L + +P AL LL M+EVG++ V FTTL+ L+R
Sbjct: 175 FRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADAL 234
Query: 163 ---------------------------AGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
AGN+D FF E+ +G PD V YT MI
Sbjct: 235 ALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVL 294
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
AG L +A++LF M + +P + YN+MI G+ AG+F++A +++ + RGC P+
Sbjct: 295 CKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSV 354
Query: 256 LVYNTLVSNLRNAGKLAEA 274
+ +N++++ L K+ EA
Sbjct: 355 VSFNSILTCLGKKRKVDEA 373
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 115/226 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ + G+ PD+ +Y+I++ + G+ + + M + GF+ D YN ++
Sbjct: 550 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFC 609
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A +L MKE P+V + ++DGL++ LD F+E +KG +VV
Sbjct: 610 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + G +++A + + M+ KG PNV+T+NS++ A + +EA + M
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ C PN Y+ L++ L K +A + M ++G ++V+
Sbjct: 730 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVT 775
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 109/217 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++++ G PD+ N M ++ G++++ + +++ GF PD +Y+IL+H L
Sbjct: 515 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLT 574
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + N+ + MK+ GF + ++DG ++G + +EM K P V
Sbjct: 575 KAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVA 634
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ L++A LF+ +KG NV Y+S+I GF G+ DEA +++EM
Sbjct: 635 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 694
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+G PN +N+L+ L A ++ EA + M E
Sbjct: 695 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 731
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 1/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+N+ I G+ G + F + K +P SY +++ L + E ++ QM
Sbjct: 252 YNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQME 311
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
E P YN ++ G+ + ++LL+ + G P ++N +L LGK K
Sbjct: 312 AERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVD 371
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL+L MK+ +P+ + ++D L G ++ DEM + P+++ +M+
Sbjct: 372 EALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMV 430
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A +LE+A +F+ +G P+ TY S+I G G+ DEA + ++M G N
Sbjct: 431 DRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN 490
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N +VY +L+ N G+ + H++ + ++ +G
Sbjct: 491 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 523
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
FRP ++Y ++ AL R+ + + +QM + GY + + ++ A R G++
Sbjct: 173 LKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVAD 232
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L+DE+ S PD YN+ + GK A + +K G P + +T+++
Sbjct: 233 ALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIW 292
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
L +AG L + F +M + +P Y MI Y +AG E A L + + +G +P
Sbjct: 293 VLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIP 352
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V ++NS++ K DEA ++ + M+ + PN YN ++ L G++ EA+ ++
Sbjct: 353 SVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRIL 411
Query: 279 RHMVEKGKYIHLVS 292
M + +L++
Sbjct: 412 DEMEHASLFPNLLT 425
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 144/288 (50%), Gaps = 13/288 (4%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF--NFRPFKNSYNAILHAL-LGIR 59
E G + +FN ++ TC +G RKV E ++ + P ++YN I+ L LG R
Sbjct: 347 ERGCIPSVVSFNSIL-TC--LGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGR 403
Query: 60 QYKLIEWVYQQMSDEGYA---PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+E Y+ + + +A P++LT NI++ + KL++ +++ + + G +PD
Sbjct: 404 ----VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 459
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L+ LGK + A L M + G + + + +T+L+ G + F E+
Sbjct: 460 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 519
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+GC PD+ + AGE+EK + +F+ + + G LP+V +Y+ +I G AG+
Sbjct: 520 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 579
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + M+ +G + YN +V +GK+ +A+E++ M EK
Sbjct: 580 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 142/294 (48%), Gaps = 7/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++ P ++ T+NI+I C G V A ++++ + LF P + N ++ L
Sbjct: 380 MKKDAEPNSS-TYNIIIDMLCLGGRVEEAYRILDEMEHASLF---PNLLTVNIMVDRLCK 435
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + +++ S G PD +TY ++ + G++D+ +RL ++M +G + +
Sbjct: 436 ARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVV 495
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + + + G P + T MD + +AG ++ + F+++
Sbjct: 496 YTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 555
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +PDV Y+++I AG+ + ++F M +G + YN+++ GFC +GK
Sbjct: 556 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 615
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+A +++EM+ + P Y +V L +L EA+ + KG +++V
Sbjct: 616 KAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 133/274 (48%), Gaps = 4/274 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ L+ + GL V + + P + N IL L RQ L+ +++ +
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
AP++ T+NIV+ + G+L + L M G SPD TYN L+ GK +
Sbjct: 195 P----APNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L++ M++ G V+ + L++ S+ G ++ +F EM G M +VV +
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ ++ G + +A LF M +G +PN FTY S++ G C AG+ D+A ++ EM +G
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN + Y +V L GK+A A +V+ M G
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAG 404
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 41/319 (12%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNI+I C GE+ AR + F++ K P +YN+++ + + +E +
Sbjct: 201 TFNIVIDFLCKQGELVEARAL---FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLV 257
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M G A D++TYN ++ + G +++ + EM R G + T + + K
Sbjct: 258 SEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKE 317
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A+ L M+ G P+ +T+L+DG +AG LD DEM ++G +P+VV Y
Sbjct: 318 GLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 377
Query: 189 TVMITSYIAAGEL-----------------------------------EKAQDLFDGMIT 213
TVM+ G++ E+A DL + M
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN 437
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG +V Y ++I G C K DEA +++ +M+ G PN ++Y T++ AGK +E
Sbjct: 438 KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A ++ + + G ++V+
Sbjct: 498 AVALLHKIPDSGLQPNVVT 516
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 115/234 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++ L +++ + + +M D G P+ + Y +M A ++ GK + LL ++
Sbjct: 447 YGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIP 506
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG P+ TY L+ L K A++ + M+E+G DP+V +TTL+DG + G+L
Sbjct: 507 DSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLS 566
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +EM +KG D V YT +I ++ G+L+ A L MI G +++ Y I
Sbjct: 567 KAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFI 626
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GFC EA ++ EM G P+ YN L+ + G + EA + M
Sbjct: 627 SGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEM 680
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 131/320 (40%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G T+N LI + G K F + K + + + A
Sbjct: 260 MRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGL 319
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ QM G P+ TY ++ + G+LD LLDEM G P+ TY +
Sbjct: 320 VREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTV 379
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K A ++L+ M+ G + L +TTL+ G N + +EM NKG
Sbjct: 380 MVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKG 439
Query: 181 -----------------------------------CMPDVVCYTVMITSYIAAGELEKAQ 205
P+ V YT ++ ++ AG+ +A
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L + G PNV TY ++I G C AG EA + +M G +PN VY TL+
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G L++A ++ MV+KG
Sbjct: 560 CKIGSLSKAVHLMNEMVDKG 579
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 12/305 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +++ C G+V +A V+ ++ + + Y ++H
Sbjct: 365 MVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERA---GVKANELLYTTLIHGHFM 421
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M ++G D+ Y ++ ++ KLD+ LL +M G P+
Sbjct: 422 NKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVI 481
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ K K A+ LL+ + + G P+V+ + L+DGL +AG++ FD+M
Sbjct: 482 YTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR 541
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V YT +I + G L KA L + M+ KG + Y S+I G G
Sbjct: 542 ELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQ 601
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV------EKGKYIHLV 291
A + +M G + Y +S N + EA V+ M+ +K Y L+
Sbjct: 602 GAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661
Query: 292 SKFKR 296
K+++
Sbjct: 662 RKYQK 666
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 136/290 (46%), Gaps = 18/290 (6%)
Query: 5 GFPTTARTFNILI---CTCGEVG-------LARKVVERFIKSKLFNFRPFKNSYNAILHA 54
G + T+N LI C G G L +++VE I F N Y +
Sbjct: 221 GLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNT 280
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+R V+++M +G A ++TYN ++ GK+++ +L++EM G SP+
Sbjct: 281 AAAVR-------VFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
T+ +L K A + ++ M E +P V+ +T L+DG R G ++ +
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
MA KG P+V Y +IT + +G+ A L D M KG +V TYN +I C G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ +A ++ EM G PN L YNT++ + G + A+E IR +EK
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYE-IRTRMEK 502
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G TA TF +LI C A +V E K +YN+++ L
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEM---KQQGIAASVVTYNSLISGLCS 311
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++M D G +P+ +T+ V+ + G + + +D M PD
Sbjct: 312 EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVI 371
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ + K A+ + M + G P+V + L+ G SR+G+ + DEM
Sbjct: 372 YTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMK 431
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG DVV Y V+I + GE+ KA L D M G PN TYN++I+GFC G
Sbjct: 432 EKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIK 491
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A + ME N + YN + GK+ EA++++ M++K
Sbjct: 492 SAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDK 538
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 126/264 (47%), Gaps = 9/264 (3%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP +S NA+L L+G ++ L E ++ +PDI T+N V+ R+G+L +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGK--GDKPLAALN-LLNHMKEVGFDPSVLHFTTLMD 158
+ ++ G +P TYN L+ K G + ++ LL M E G P+ + F L++
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G + N A F+EM +G VV Y +I+ + G++E+ L + M G P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N T+ +++GFC G +A + M R P+ ++Y L+ R GK+ +A V
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392
Query: 279 RHMVEKG------KYIHLVSKFKR 296
M +KG Y L++ F R
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSR 416
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 3/277 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL---GIRQYKLIEWVY 68
TFN +I +G RK + K + P +YN+++ G ++ +
Sbjct: 193 TFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLL 252
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M + G +P +T+ +++ + R+ +EM + G + TYN L+ L
Sbjct: 253 KEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSE 312
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K + L+ M+++G P+ + F ++ G + G + + D M + PDVV Y
Sbjct: 313 GKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIY 372
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T++I Y G++E A + + M KG PNV TYN +I GF +G + A ++ EM+
Sbjct: 373 TILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKE 432
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + + YN L+ L G++ +A +++ M E G
Sbjct: 433 KGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVG 469
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 119 NILLHVLGKGDKPLAALN--LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
++L+ L + +PL A + LL PS L+ GL A +D + F
Sbjct: 123 DMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSA 182
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM---A 233
+ PD+ + +I+ G+L KA D+ + G P+V TYNS+I G+C A
Sbjct: 183 LRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGA 242
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G ++KEM G +P + + L++ A A V M ++G +V+
Sbjct: 243 GNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 113/236 (47%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F F P YN +++ L R V+ M +G D +TYN ++ G+
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
RLL +M + P+ + L+ K L A NL M P+V + +L++
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G G L KY FD M +KGC PDVV Y +IT + + +E LF M +G +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ FTYN++I G+C AGK + A + M G +P+ + YN L+ L N GK+ +A
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F ILI C C + LA ++ + +K FRP + ++L+ +++ +
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMK---LGFRPSIVTLGSLLNGFCQGNRFQEAVSLV 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M G+ P+++ YN V+ + L+ + M + G D TYN L+ L
Sbjct: 173 DSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LL M + DP+V+ FT L+D + GNL + + EM + +P+V Y
Sbjct: 233 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTY 292
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I + G L A+ +FD M++KG P+V TYN++I GFC + + ++ + EM
Sbjct: 293 NSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTY 352
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G + YNTL+ AGKL A +V MV+ G +V+
Sbjct: 353 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 129/294 (43%), Gaps = 18/294 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVG-------LARKVVERFIKSKLFNFRPFKNSYNAILH 53
M + G A T+N LI G L R +V+R I + F +++
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF----- 264
Query: 54 ALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+++ L+E +Y++M P++ TYN ++ G L + D M G
Sbjct: 265 ----VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD TYN L+ K + + L M G + TL+ G +AG L+ +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F+ M + G PD+V Y +++ G++EKA + + + ++ TYN +I+G C
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
K EA + + + +G P+ + Y T++S L G EA ++ R M E G
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 494
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 130/271 (47%), Gaps = 8/271 (2%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
++ RP + + +L + + ++ ++ ++Y +M + G + D+ ++ I++ R
Sbjct: 69 EMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCS 128
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
+L LL +M + GF P T LL+ +G++ A++L++ M GF P+V+ +
Sbjct: 129 RLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYN 188
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
T+++GL + +L+ F M KG D V Y +I+ +G A L M+ +
Sbjct: 189 TVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKR 248
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PNV + ++I F G EA + KEM R PN YN+L++ G L +A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 275 HEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ MV KG Y L++ F + KR
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 339
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 7/235 (2%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L ++++ R + +F + N + +H LG +Y ++ M +G PD++TYN
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGF--CIHGCLGDAKY-----MFDLMVSKGCFPDVVTYN 328
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ + +++ +L EM G D TYN L+H + K A + N M +
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P ++ + L+D L G ++ +++ D++ Y ++I +L++A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
LF + KG P+ Y +MI G C G EA + + M+ G P+ +Y+
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 6/231 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI T+N LI C G +G A+ + + + F P +YN ++
Sbjct: 280 MIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF---PDVVTYNTLITGFCK 336
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ +M+ +G D TYN ++ + GKL+ ++ + M G SPD T
Sbjct: 337 SKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVT 396
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNILL L K AL ++ +++ D ++ + ++ GL R L F +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
KG PD + Y MI+ G +A L M G +P+ Y+ +R
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLR 507
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%)
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
K D L EM +S P + +L V+ K +K + L + M+ +G + FT
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L+ R L +M G P +V ++ + ++A L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G +PNV YN++I G C + A + ME +G + + YNTL+S L N+G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 275 HEVIRHMVEK 284
++R MV++
Sbjct: 239 ARLLRDMVKR 248
>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 613
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G F +I ++G ++ F + ++Y A++H Q
Sbjct: 311 MLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQ 370
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E + +M +G +++ +N ++ + G +D+ R+ D M + GF D TYN
Sbjct: 371 LDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNT 430
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L K ++ A L M E G DP+ + FT ++D + GNL + F +M KG
Sbjct: 431 IAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKG 490
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y +I Y G+L++A L D M + G +++TY +++ G C+ GK +EA
Sbjct: 491 EKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEAL 550
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
T++ E+ +G + + Y ++S L G+ EA + M+ G
Sbjct: 551 TLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAG 595
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 129/293 (44%), Gaps = 56/293 (19%)
Query: 48 YNAILHALLGIRQYKLIEW------------VYQQMSDEGYAPDILTYNIVMCAKYRLGK 95
YNA + LL IEW V+++M + G DI + ++ + +LG
Sbjct: 283 YNAATYTLL-------IEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGN 335
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
+ + L DE+ G + HTY L+H + AA L+N M+ G D +++ F T
Sbjct: 336 MKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNT 395
Query: 156 LMDGLSRAGNLD------------------------------------ACKYFFDEMANK 179
L++G + G +D A ++ F M K
Sbjct: 396 LINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLF-TMVEK 454
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+ V +T+MI + G L +A+ +F M KG+ PNV TYN++I G+ GK EA
Sbjct: 455 GVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEA 514
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EMES G + Y TLV GK+ EA ++ + KG I +V+
Sbjct: 515 YRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVT 567
Score = 103 bits (257), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 124/272 (45%), Gaps = 18/272 (6%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERF----IKSKLFNFRPFKNSYNAILHAL 55
E G A T+ LI C G++ A +V + L F N Y
Sbjct: 348 ERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGY------- 400
Query: 56 LGIRQYKLIEWVYQQ--MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
++ + E + Q M +G+ DI TYN + +L + ++ R L M G P
Sbjct: 401 --CKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDP 458
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ ++ I++ + K + A + MK+ G P+V+ + TL+DG S+ G L
Sbjct: 459 NAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLK 518
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
DEM + G D+ YT ++ G++E+A L + + KG ++ TY ++I G
Sbjct: 519 DEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKE 578
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
G+ +EA + EM + G P+ VY +LV+NL
Sbjct: 579 GRSEEAFRLYDEMMAAGLTPDDRVYTSLVANL 610
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M+ +G P+++TYN ++ A ++ + + +L M + TY +L+ G
Sbjct: 240 EMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSG 299
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A + M E G + + FT+++ + GN+ FDE+ +G + + Y
Sbjct: 300 KIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYG 359
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I +G+L+ A+ L + M ++G N+ +N++I G+C G DEA M ME +
Sbjct: 360 ALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKK 419
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + YNT+ L + EA + MVEKG
Sbjct: 420 GFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKG 455
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 95/226 (42%), Gaps = 35/226 (15%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++ D M +G D + + L L + D+ + +L M E D +V T ++DGL
Sbjct: 166 KVFDYMVHNGLKIDDRSCIVCLLALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGL 225
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI------------------------ 196
+ G ++ K EM KG P+VV Y ++ +YI
Sbjct: 226 CKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNA 285
Query: 197 -----------AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
++G++ +A+ +F+ M+ +G ++ + S+I C G A + E
Sbjct: 286 ATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDE 345
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ RG N Y L+ N+G+L A ++ M +G ++LV
Sbjct: 346 LNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLV 391
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 6/166 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G A +F I+I C G + A +V + K +P +YN ++
Sbjct: 451 MVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKK---GEKPNVVTYNTLIDGYSK 507
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + +M G DI TY ++ + GK+++ LL+E+ R G + T
Sbjct: 508 KGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVT 567
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
Y ++ L K + A L + M G P +T+L+ L +
Sbjct: 568 YTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHKT 613
>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
Length = 455
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 139/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNI + G+ K ++ F K + P SY A++ AL + +
Sbjct: 21 MVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGR 80
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E + QM +EG P+I+ ++ ++ + K ++ L EM G P+ +N
Sbjct: 81 VDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNT 140
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L L K + + L++ ++ +G P V+ + TL+DG AG +D + M + G
Sbjct: 141 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 200
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ Y ++ Y AG ++ A LF M++ G P V TYN+++ G +F EA
Sbjct: 201 LKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 260
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M + G YNT+++ L + + EA ++ + + KG +++++
Sbjct: 261 ELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIIT 312
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 109/227 (48%), Gaps = 35/227 (15%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G L + H LL+ M +G SP+ H +NI K A+++ N M++ G P + +
Sbjct: 9 GALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSY 68
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF----- 208
L+D L + G +D + F++M N+G P++V ++ ++ + + EK ++LF
Sbjct: 69 GALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLN 128
Query: 209 -------------------DGMITKGQ-----------LPNVFTYNSMIRGFCMAGKFDE 238
+G + +GQ P+V +YN++I G C+AG DE
Sbjct: 129 VGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE 188
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++ M S G PN YNTL+ AG++ A+ + R M+ G
Sbjct: 189 ASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNG 235
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 134/291 (46%), Gaps = 14/291 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKS-KLFNFRPFKNSYNAIL--HAL 55
M+ G FN ++C + G +V+E R + S + RP SYN ++ H L
Sbjct: 126 MLNVGIHPNIVFFNTILCNLCKEG---RVMEGQRLVDSIECMGVRPDVISYNTLIDGHCL 182
Query: 56 LGI--RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
G KL+E M G P+ +YN ++ + G++D + L +M +G +P
Sbjct: 183 AGTIDEASKLLEG----MVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITP 238
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TYN +LH L + + A L +M G + + T+++GL ++ +D F
Sbjct: 239 GVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMF 298
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ +KG +++ +T+MI + + G E A DLF + G +P+V TY +
Sbjct: 299 QSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEE 358
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G +E ++ ME G PN + N LV L + G ++ A + + E+
Sbjct: 359 GSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDER 409
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 10/257 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++N LI C G + A K++E + L +P SYN +LH + ++
Sbjct: 172 SYNTLIDGHCLAGTIDEASKLLEGMVSVGL---KPNSFSYNTLLHGYCKAGRIDSAYSLF 228
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G P ++TYN ++ ++ + + L M SG +TYN +L+ L K
Sbjct: 229 RKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWGIYTYNTILNGLCKS 288
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + + G +++ FT ++ L + G + F + G +PDVV Y
Sbjct: 289 NCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTY 348
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
V+ + I G LE+ LF M G PN N+++R G A + +++
Sbjct: 349 RVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDE 408
Query: 249 RGCNPNFLVYNTLVSNL 265
R NF V + S L
Sbjct: 409 R----NFSVEASTTSML 421
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 77/158 (48%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+LH G +LLN M G P+ F ++ G +D F++M G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD V Y +I + G ++ A+ F+ MI +G PN+ ++S++ G C K+++
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ EM + G +PN + +NT++ NL G++ E ++
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLV 158
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%)
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++ G G L + M G P+ + + ++Y G ++KA D+F+ M G
Sbjct: 1 MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P+ +Y ++I C G+ D+A +M + G PN +V+++LV L + K +
Sbjct: 61 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120
Query: 276 EVIRHMVEKGKYIHLV 291
E+ M+ G + ++V
Sbjct: 121 ELFFEMLNVGIHPNIV 136
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/265 (29%), Positives = 130/265 (49%), Gaps = 4/265 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
M+ +G T T+N LI + G VE F + + P + +Y ++ HA G
Sbjct: 364 MVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGF 423
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + +YQ+M G +PD TY++++ + G L +L EM G P+ TY
Sbjct: 424 LNFAME--MYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTY 481
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI++ + K AL L M+ GF+P + ++ +M+ L +G LD + F EM
Sbjct: 482 NIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKR 541
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +PD Y +++ + AG +EKA + + M+ G PNV T NS++ F + +
Sbjct: 542 KNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPD 601
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVS 263
A +++ M + G NP+ Y L+S
Sbjct: 602 AYNLLQSMLNLGLNPSLQTYTLLLS 626
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 106/210 (50%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ D TY ++ R + ++LLD+M R G P TYN L+H G+ + A
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ + N M++ G +P + + TL+D ++AG L+ + M G PD Y+VMI
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINC 452
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
AG L A LF MI +G +PN+ TYN MI A + A + ++M++ G P+
Sbjct: 453 LGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPD 512
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ Y+ ++ L ++G L EA + M K
Sbjct: 513 KVTYSIVMEVLGHSGYLDEAEAIFSEMKRK 542
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 119/249 (47%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
+L F+ +Y ++ L +Q+ I + QM +G P ++TYN ++ + R L
Sbjct: 330 QLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYL 389
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+ + ++M ++G PD TY L+ + K A+ + M+ G P ++ +
Sbjct: 390 NDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVM 449
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
++ L +AG+L A F EM +GC+P++V Y +MI A + A L+ M G
Sbjct: 450 INCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGF 509
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ TY+ ++ +G DEA + EM+ + P+ VY LV AG + +A E
Sbjct: 510 EPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWE 569
Query: 277 VIRHMVEKG 285
+ M+ G
Sbjct: 570 WYQAMLHAG 578
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 123 HVLGKGDKPLAALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
VL + AL + +K++ GF +TT++ L RA A D+M GC
Sbjct: 310 QVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGC 369
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P VV Y +I SY A L A ++F+ M G P+ TY ++I AG + A
Sbjct: 370 QPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAME 429
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M + M++ G +P+ Y+ +++ L AG LA A ++ M+E+G +LV+
Sbjct: 430 MYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVT 480
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T+NI+I + + ++ + + F P K +Y+ ++ L
Sbjct: 469 MIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGY 528
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ +M + + PD Y +++ + G +++ M +G P+ T N
Sbjct: 529 LDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNS 588
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
LL + ++ A NLL M +G +PS+ +T L+ + A
Sbjct: 589 LLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLSCCTEA 631
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-- 58
M GF T++I++ G G + F + K N+ P + Y +L L G
Sbjct: 504 MQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVY-GLLVDLWGKAG 562
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
K EW YQ M G P++ T N ++ A R+ +L + LL M G +P TY
Sbjct: 563 NVEKAWEW-YQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTY 621
Query: 119 NILLHVLGKGDKP 131
+LL + P
Sbjct: 622 TLLLSCCTEARSP 634
>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
Length = 595
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 121/245 (49%), Gaps = 11/245 (4%)
Query: 47 SYNAILHALL--GIRQYKLIEWVYQQMSDEGYA---PDILTYNIVM---CAKYRLGKLDQ 98
SYN +L AL G + + MS E + P+ ++Y VM CA R G +
Sbjct: 85 SYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTG---E 141
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
LL M SG D TY L+ L + AAL LL+ M G P+V+ ++ L+
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G R+G F++M+ +G PDV+ +T +I G+ KA + D M+ +G P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV TYN +I C G EA T+ KEM+ +G P+ + YNTL++ L ++ EA +
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321
Query: 279 RHMVE 283
M++
Sbjct: 322 EEMIQ 326
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 2/253 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP SY ++ L R+ + + M G D++TY ++ +LD
Sbjct: 120 RPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALE 179
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LLDEM SG P+ Y+ LL + + + M G P V+ FT L+D L
Sbjct: 180 LLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLC 239
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G D M +G P+VV Y V+I S G + +A L M KG P+V
Sbjct: 240 KEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVV 299
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEM--ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYN++I G + DEA + ++EM P+ + +N+++ L G++ +A +V
Sbjct: 300 TYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVRE 359
Query: 280 HMVEKGKYIHLVS 292
M E+G +LV+
Sbjct: 360 MMAERGCMCNLVT 372
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 137/287 (47%), Gaps = 5/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G T+N LI E+ A +E I+ P ++N+++H L
Sbjct: 289 MDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTV-VEPDVVTFNSVIHGLCK 347
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + V + M++ G +++TYN ++ R+ K+ L+DE+ SG PD T
Sbjct: 348 IGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFT 407
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL++ K + A L M++ G + H+ L+ + + G ++ F+EM
Sbjct: 408 YSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM- 466
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C D + Y+ MI +G+++ + L M+ +G P+ TY+ +I + G +
Sbjct: 467 DKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLE 526
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA ++K+M + G P+ V+++L+ G+ + ++I M K
Sbjct: 527 EAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAK 573
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 5/219 (2%)
Query: 79 DILTYNIVMCAKYRLG--KLDQFHRLLDEMGRSGFS---PDFHTYNILLHVLGKGDKPLA 133
D ++YN V+ A R G L Q LL +M R P+ +Y ++ L +
Sbjct: 82 DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A+ LL M+ G V+ + TL+ GL A LDA DEM G P+VV Y+ ++
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
Y +G + +F+ M +G P+V + +I C GK +A + M RG P
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N + YN L+++L G + EA + + M +KG +V+
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 132/271 (48%), Gaps = 6/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G+ G A KV + ++ L P +YN ++++L + + ++M D+G
Sbjct: 238 LCKEGKTGKAAKVKDMMVQRGL---EPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGV 294
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFHTYNILLHVLGKGDKPLAA 134
APD++TYN ++ + ++D+ L+EM G + PD T+N ++H L K + A
Sbjct: 295 APDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQA 354
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+ + M E G +++ + L+ G R + DE+A G PD Y+++I
Sbjct: 355 VKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILING 414
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ E+++A+ M +G +F Y ++ C G + A + EM+ + C +
Sbjct: 415 FSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLD 473
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ Y+T++ +G + ++I+ M+++G
Sbjct: 474 AIAYSTMIHGACKSGDMKTVKQLIQDMLDEG 504
>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
Length = 1153
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 126/239 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN+++ L+ + E ++ +M G PD TYN+++ A + ++++ R+ EM
Sbjct: 775 SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEM 834
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G+ + TYN ++ L K + A++L ++ GF P+ + L+DGL +AG +
Sbjct: 835 HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKM 894
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ F+EM GC P+ Y +++ + AG E +F+ M+ +G P++ +Y +
Sbjct: 895 VDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVL 954
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C AG+ ++ + +++ G P+ ++YN L+ L + ++ EA + M +KG
Sbjct: 955 IDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKG 1013
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 135/281 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++N LI + L + F + K P + +YN IL A+ + + +
Sbjct: 768 GVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEM 827
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V +M +GY +TYN ++ + +L+Q L + GFSP TY LL
Sbjct: 828 LRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDG 887
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K K + A NL N M E G P+ + L++G AGN + F++M +G PD
Sbjct: 888 LLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPD 947
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ YTV+I + AG L F ++ G P++ YN +I G + + +EA +
Sbjct: 948 IKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFN 1007
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ +G PN YN+L+ +L AGK +EA ++ ++ KG
Sbjct: 1008 EMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKG 1048
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ L+ CG+ G ++ V+E + + SY A++ AL + + V+ +M
Sbjct: 320 TYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEM 379
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
++G +P+ +YN ++ + D+ L + M G SP+ +T+ + ++ GK +
Sbjct: 380 KEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQS 439
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L A+ HMK G P V ++ L+R+G L K F E+ + G PD + YT+M
Sbjct: 440 LKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMM 499
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I A + ++A + F M+ G +P+V NS+I GK +EA + +++
Sbjct: 500 IKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKI 559
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
P YNTL+S L GK+ E ++ M
Sbjct: 560 EPTNGTYNTLLSGLGREGKVKEVMHLLEEMT 590
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 142/313 (45%), Gaps = 30/313 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G+ +T T+N +I + + ++ + F P +Y +L LL +
Sbjct: 834 MHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGK 893
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ +M + G P+ YNI++ G + ++ ++M G +PD +Y +
Sbjct: 894 MVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTV 953
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + L+ + E+G +P ++ + L+DGL ++ ++ F+EM KG
Sbjct: 954 LIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKG 1013
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA- 239
+P++ Y +I AG+ +A +++ ++ KG PNVFTYN++IRG+ ++G D A
Sbjct: 1014 IVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTDNAY 1073
Query: 240 ----CT-------------------------MMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
C + EM+ RGC P+ YN ++ + + +
Sbjct: 1074 AAYDCVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLILDAIGKSMR 1133
Query: 271 LAEAHEVIRHMVE 283
+ E +V + E
Sbjct: 1134 IEEMLKVQEEIAE 1146
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
VY+ M ++G +P + TY+++M + + +D LL+EM G P+ ++Y I + VLG
Sbjct: 200 VYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLG 259
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A +L M++ G P V+ T ++ L AG L K F +M PD V
Sbjct: 260 QAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRV 319
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ +G+ + ++++ M+ G N+ +Y +++ C G+ DEA + EM
Sbjct: 320 TYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEM 379
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ +G +P YN+L+S A A E+ HM
Sbjct: 380 KEKGISPEQYSYNSLISGFLKADMFDRALELFNHM 414
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G + RT+++L+ + G+ V+ + + +P SY + L +
Sbjct: 204 MVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAAR 263
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M D G PD++T+ +V+ G+L + +M S PD TY
Sbjct: 264 FDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYIT 323
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL G + + + N M G++ +++ +T ++D L + G LD FDEM KG
Sbjct: 324 LLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKG 383
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ Y +I+ ++ A ++A +LF+ M G PN +T+ I + +G+ +A
Sbjct: 384 ISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAI 443
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M+S+G P+ N ++S+L +G+L A V + + G
Sbjct: 444 QRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMG 488
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 130/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N LI + G + +E + P +Y+ ++ + R
Sbjct: 169 MREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRD 228
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ W+ +M G P++ +Y I + + + D+ +++L +M SG PD T+ +
Sbjct: 229 VDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTV 288
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ VL + A ++ MK P + + TL+D +G+ + ++ M G
Sbjct: 289 VIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADG 348
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
++V YT ++ + G L++A +FD M KG P ++YNS+I GF A FD A
Sbjct: 349 YNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRAL 408
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M + G +PN + ++ +G+ +A + HM KG
Sbjct: 409 ELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKG 453
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 127/265 (47%), Gaps = 1/265 (0%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ G + K ++R+ K P + NA+L +L + + + V+ ++ D G +PD
Sbjct: 434 GKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDT 493
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TY +++ + K D+ +M +G PD N L+ L KG K A L +
Sbjct: 494 ITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQ 553
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
+KE+ +P+ + TL+ GL R G + + +EM + P+++ Y ++ GE
Sbjct: 554 LKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGE 613
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ A + M KG P++ +YN+++ G +F+EA M +M+ + P++ T
Sbjct: 614 VNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEEAFRMFCQMK-KILAPDYATLCT 672
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + G + EA ++ + K
Sbjct: 673 ILPSFVKNGLMKEALHTVKEYILKA 697
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 101/226 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ M + ++ T+ V G L L M +G S + +TYN L++ L
Sbjct: 130 VFDLMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLV 189
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ + M E G PSV ++ LM + ++D + +EM +G P+V
Sbjct: 190 KSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVY 249
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT+ I A ++A + M G P+V T+ +I+ C AG+ +A + +M
Sbjct: 250 SYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKM 309
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ P+ + Y TL+ ++G E+ MV G ++VS
Sbjct: 310 KASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVS 355
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 136/340 (40%), Gaps = 41/340 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G N LI T + G + + F + K P +YN +L L +
Sbjct: 519 MVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGK 578
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + ++M+ + P+++TYN V+ + G+++ +L M G +PD +YN
Sbjct: 579 VKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNT 638
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV------------------GFDPSVLH---------- 152
+++ L K ++ A + MK++ G LH
Sbjct: 639 VMYGLIKEERFEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAD 698
Query: 153 -------FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
F +LM+G+ ++ F + +A++G + + +I + +A
Sbjct: 699 CNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAH 758
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF+ G +YNS+IRG D A + EM+ GC P+ YN ++ +
Sbjct: 759 QLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAM 818
Query: 266 RNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ ++ E V M KG Y ++S + KR
Sbjct: 819 GKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKR 858
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 81/200 (40%), Gaps = 35/200 (17%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K L A L N K +G + +L+ GL +D + F EM G
Sbjct: 744 LIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLG 803
Query: 181 CMPD-----------------------------------VVCYTVMITSYIAAGELEKAQ 205
C PD V Y +I+ + + LE+A
Sbjct: 804 CGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAI 863
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
DL+ ++++G P TY ++ G AGK +A + EM GC PN +YN L++
Sbjct: 864 DLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGH 923
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
R AG ++ MVE+G
Sbjct: 924 RIAGNTENVCQIFEKMVEQG 943
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 61/165 (36%), Gaps = 34/165 (20%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H+L P AL L P+ +H T ++C Y + M G
Sbjct: 78 VVHMLRSAPGPAEALELFTAAAR---QPTAVHTT------------ESCNYMLELMRAHG 122
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
G++ + DL I K NV T+ ++ G + G A
Sbjct: 123 ----------------RVGDMAQVFDLMQKQIVKA---NVGTFATVFSGVGVQGGLRSAP 163
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M G + N YN L+ L +G AEA EV + MVE G
Sbjct: 164 VALPVMREAGMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDG 208
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 142/321 (44%), Gaps = 60/321 (18%)
Query: 22 EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDIL 81
++G ++++ +K P + +N+++H+ R Y + ++M+D G P +
Sbjct: 157 QLGWCKRIINMMMKE---GCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYV 213
Query: 82 TYNIVM---CAKYRL--------------------------------------GKLDQFH 100
YNI + C L GK D
Sbjct: 214 AYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAF 273
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+++ M GF PD TY+ ++ L + K A L MK VG +P V +T L+D
Sbjct: 274 QIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSF 333
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+AG ++ + +FDEM + GC +VV YT ++ +Y+ A +L +A D+F+ MI G PN
Sbjct: 334 CKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNT 393
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCN----------------PNFLVYNTLVSN 264
TY++++ G C AG+ +AC + ++ N PN + Y L+
Sbjct: 394 ITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDG 453
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L A K+ +A E++ M+ G
Sbjct: 454 LCKAHKVVDAQELLDAMLSNG 474
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 131/284 (46%), Gaps = 25/284 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G P T++ L+ C GE+ +K E + K L+G
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEI---QKACEVYTK-------------------LIG 421
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ + AP+++TY ++ + K+ LLD M +G P+
Sbjct: 422 TSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHII 481
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K K A + M + G+ P+V +T+L+D + + LD +M
Sbjct: 482 YDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMV 541
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C P+VV YT MI GE +KA L M KG PNV TY ++I G +GK D
Sbjct: 542 ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVD 601
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + +M ++GC PN++ Y L+++ AG L EAH ++ M
Sbjct: 602 LSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 645
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 137/321 (42%), Gaps = 36/321 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG ++ LI +VG E F++ + P ++Y +++ A+ R+
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L V QM + P+++TY ++ R+G+ + +LL M G SP+ TY
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTA 589
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC----------- 169
L+ LGK K +L L M G P+ + + L++ AG LD
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 649
Query: 170 --KYF--------------------FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
KY +E+ + G +P Y ++I ++ AG LE+A +L
Sbjct: 650 WPKYLQGYCSVVQGFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALEL 709
Query: 208 FDGMITKGQLPNVFT---YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
M+ N+ + Y S+I+ C+A + ++A + E+ +G P V+ L+
Sbjct: 710 HKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKG 769
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L K EA ++ + ++G
Sbjct: 770 LIKVNKWNEALQLCYSICDEG 790
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 104/237 (43%), Gaps = 10/237 (4%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
++ D GY P TYN ++ G++D R+ EM SGF D T L K
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ AL ++ F + T ++ GL A D F M C+P+VV Y
Sbjct: 90 RWSDALVMIERED---FKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++T ++ +L + + + M+ +G PN +NS++ +C A + A ++K M
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206
Query: 250 GCNPNFLVYNTLVSN------LRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
GC P ++ YN + + L + LA A +V M+ ++ V+ + RC
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNT-ANFARC 262
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 115/255 (45%), Gaps = 5/255 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+ T+ +I +G +K ++ + P +Y A++ L +
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L ++ QMS +G AP+ +TY +++ G LD+ H LL EM ++ + Y
Sbjct: 600 VDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCS 659
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ G K +A+L LL ++ G P + L+D S+AG L+ EM
Sbjct: 660 VVQ--GFSKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELS 717
Query: 181 CMPDVVC---YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++ YT +I + A +LEKA +L+ + KG +P + + +I+G K++
Sbjct: 718 SSLNITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWN 777
Query: 238 EACTMMKEMESRGCN 252
EA + + G N
Sbjct: 778 EALQLCYSICDEGVN 792
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+++TY ++ + +L R+++ M + G +P+ +N L+H A L
Sbjct: 140 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKL 199
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA------CKYFFDEMANKGCMPDVVCYTVM 191
L M + G P + + + + L + + ++EM C+ + V
Sbjct: 200 LKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANF 259
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
G+ + A + M+ KG +P+ TY+ +I C A K ++A + +EM+S G
Sbjct: 260 ARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGV 319
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
NP+ Y L+ + AG + +A M G ++V+
Sbjct: 320 NPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVT 360
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 53/343 (15%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF----IKSKLFNFRPFKNSYNAILHALL 56
M E+G T TFN LI G+ RK E + ++ N +P +YN ++ AL
Sbjct: 153 MEESGCKPTTSTFNTLI---KGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALC 209
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYN-------------------------------- 84
+ K V QM G PD++TYN
Sbjct: 210 KKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNER 269
Query: 85 ---IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLL 138
I++ G L + R++ M G P+ +N L+ +G D AL +
Sbjct: 270 TCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTM- 328
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M+E G P V+ F+T+M+G S AG +D C+ FD+M G PD+ ++++ ++ A
Sbjct: 329 --MEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRA 386
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
GE KA+ L + M G PNV + ++I G+C AGK ++A + + M +PN +
Sbjct: 387 GEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKTF 446
Query: 259 NTLVSNLRNAGKLAEAHEVIRHM-----VEKGKYIHLVSKFKR 296
TL+ A + A E+++ M V + + LVS+ R
Sbjct: 447 ETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWR 489
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 148/320 (46%), Gaps = 42/320 (13%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G + N +I E G ++ +E F K + +P +++N ++ IR+
Sbjct: 118 MEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRK 177
Query: 61 ----YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
KL+E + + + P+ TYNI++ A + + + ++ +M SG PD
Sbjct: 178 PEESMKLLELMTRTTN---LKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVV 234
Query: 117 TYN-----------------ILLHVLGKGDKP------------------LAALNLLNHM 141
TYN I++ +L K P AL ++ M
Sbjct: 235 TYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRM 294
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+++G P+++ F +L+ G G+ D M G PDV+ ++ ++ + +AG +
Sbjct: 295 RDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVKPDVITFSTIMNGWSSAGRM 354
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+K Q++FD M+ G P++ ++ + +GF AG+ +A +++ M G PN +++ T+
Sbjct: 355 DKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESLLNFMSKYGVRPNVVIFTTI 414
Query: 262 VSNLRNAGKLAEAHEVIRHM 281
+S AGK+ +A +V HM
Sbjct: 415 ISGWCTAGKMEKAWKVFEHM 434
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 129/286 (45%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++E G T T+ L+ + + + + +P NAI++A
Sbjct: 83 LVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGN 142
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYN 119
K ++Q+M + G P T+N ++ + K ++ +LL+ M R+ P+ TYN
Sbjct: 143 VKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYN 202
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
IL+ L K A N+++ M G P V+ + TL ++ G + + +M NK
Sbjct: 203 ILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNK 262
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P+ +++ Y G L +A + M G PN+ +NS+I+GF G D
Sbjct: 263 KVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGV 322
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ME G P+ + ++T+++ +AG++ + E+ M++ G
Sbjct: 323 DKALTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSG 368
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 6/232 (2%)
Query: 11 RTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
RT I++ C G + A +VV R + P +N+++ L I ++
Sbjct: 269 RTCGIIVGGYCEQGNLAEALRVVYRM---RDLGIHPNLVIFNSLIKGFLDIGDSDGVDKA 325
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
M + G PD++T++ +M G++D+ + D+M +SG PD H ++IL +
Sbjct: 326 LTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVR 385
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+P+ A +LLN M + G P+V+ FTT++ G AG ++ F+ M + P++
Sbjct: 386 AGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKT 445
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+ +I Y A + +A+++ M +P T + + G ++A
Sbjct: 446 FETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDA 497
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%), Gaps = 1/228 (0%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++++ + ++G+ P +TY ++ A R + LL EM +G PD N +++
Sbjct: 77 QFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINA 136
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-P 183
+ A+ + M+E G P+ F TL+ G + + M + P
Sbjct: 137 FSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKP 196
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ Y +++ + +++A ++ M+ G P+V TYN++ R + G+ ++A +++
Sbjct: 197 NNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESII 256
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+M ++ NPN +V G LAEA V+ M + G + +LV
Sbjct: 257 VDMLNKKVNPNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLV 304
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 1/192 (0%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK + + + + G P TY L+ L + + A LL+ M+E G P +
Sbjct: 71 GKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILL 130
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+++ S +GN+ F +M GC P + +I Y + E++ L + M
Sbjct: 131 NAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTR 190
Query: 214 KGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
L PN TYN ++ C EA ++ +M + G P+ + YNTL G+
Sbjct: 191 TTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETN 250
Query: 273 EAHEVIRHMVEK 284
+A +I M+ K
Sbjct: 251 KAESIIVDMLNK 262
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 3/174 (1%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+++L + KP A + N + E G P+ + +T L+ L+R A EM G
Sbjct: 63 LMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETG 122
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + +I ++ +G +++A ++F M G P T+N++I+G+ + K +E+
Sbjct: 123 IKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESM 182
Query: 241 TMMKEMESRGCN--PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ E+ +R N PN YN LV L + EA V+ M+ G +V+
Sbjct: 183 KLL-ELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQPDVVT 235
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 10/150 (6%)
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V T LM+ L G ++ F+ + +G P V YT ++ + + L
Sbjct: 56 TVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGLL 115
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M G P+ N++I F +G EA + ++ME GC P +NTL+
Sbjct: 116 SEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLI------ 169
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVSKFKRYK 298
+ + +IR E K + L+++ K
Sbjct: 170 ----KGYGIIRKPEESMKLLELMTRTTNLK 195
>gi|357499677|ref|XP_003620127.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495142|gb|AES76345.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 412
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 134/265 (50%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G V A+ V+ +K + P +Y++++ + + + ++ MS G ++
Sbjct: 149 GNVKEAKNVLAMMMKQGI---NPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANV 205
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+YNI++ ++ D+ L +EM PD TYN L++ L K K AL L++
Sbjct: 206 WSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDE 265
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M + G P ++ +++L+D L + +D + ++G P++ YT++I G
Sbjct: 266 MHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDGLCKGGR 325
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
LE A ++F+ ++ KG V TY MI GFC G FDEA ++ +M+ C PN L Y
Sbjct: 326 LEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPNALTYEI 385
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +L + + +A ++R M+ +G
Sbjct: 386 IIRSLFDNDENDKAENLLREMITRG 410
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++NI+I ++ + + + F + P +YN++++ L +
Sbjct: 200 GVTANVWSYNIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYA 259
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M D G PDI+TY+ ++ A + ++D+ LL + G P+ +TY IL+
Sbjct: 260 LKLVDEMHDRGQPPDIITYSSLLDALCKNHQVDKAIALLKNLKDQGIRPNMYTYTILIDG 319
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L KG + A N+ + G++ +V +T ++ G G D +M + C P+
Sbjct: 320 LCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCFPN 379
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ Y ++I S E +KA++L MIT+G L
Sbjct: 380 ALTYEIIIRSLFDNDENDKAENLLREMITRGLL 412
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%)
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
GN+ K M +G P+ V Y+ ++ Y E+ A+ +F M +G NV++Y
Sbjct: 149 GNVKEAKNVLAMMMKQGINPNAVTYSSLMDGYCLVNEVNNAKGIFSTMSLRGVTANVWSY 208
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N MI GFC DEA + +EM R P+ + YN+L++ L +GK++ A +++ M +
Sbjct: 209 NIMINGFCKIKMTDEAMNLFEEMHCRKLIPDVVTYNSLINGLCKSGKISYALKLVDEMHD 268
Query: 284 KGKYIHLVS 292
+G+ +++
Sbjct: 269 RGQPPDIIT 277
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G T+N I C GE+ A ++V R I +P +YN +++ L
Sbjct: 242 VIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQ---GPKPDVVTYNYLIYGLCK 298
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E ++ +EG PD TYN ++ + G + R+L +GF PD T
Sbjct: 299 NSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFT 358
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + AL L N G P+V+ + TL+ GLS G + EM+
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG +P+V + +++ G + A L MI+KG P++FT+N +I G+ K +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ M G +P+ YN+L++ L K + E + MVEKG
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKG 526
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 128/289 (44%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +TFNIL+ C G V A +V+ I F P ++N ++H
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF---PDIFTFNILIHGYST 473
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M D G PD+ TYN ++ + K + M G +P+ T
Sbjct: 474 QLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFT 533
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NILL L + K AL LL MK +P + F TL+DG + G+LD F +M
Sbjct: 534 FNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 178 NKGCMP-DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ Y ++I ++ + A+ LF M+ + P+ +TY M+ GFC G
Sbjct: 594 EVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D + EM G P+ +++ L ++ EA +I MV+KG
Sbjct: 654 DLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 111/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M G + + T+N ++ + G + + +LLD++ + G P+ TYN + L
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + AA+ ++ + + G P V+ + L+ GL + + + ++ N+G PD
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSF 322
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y G ++ A+ + + G +P+ FTY S+I G C G+ + A + E
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN ++YNTL+ L N G + EA ++ M EKG
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKG 421
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 21/294 (7%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI---- 58
E+GF T T+ +I G G + E + + +N N H L G+
Sbjct: 33 EDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMR-------QNVGN---HMLEGVYVGA 82
Query: 59 -----RQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
R+ K+ E V +++M P + +YN +M G DQ H++ M G
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGI 142
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+PD +++ I + + +P AAL LLN+M G + +V+ + T++ G D
Sbjct: 143 TPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYE 202
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F +M G + + ++ G++++ + L D +I +G LPN+FTYN I+G C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLC 262
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ D A M+ + +G P+ + YN L+ L K EA + +V +G
Sbjct: 263 QKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEG 316
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+++N +LH L K E + ++ G P++ TYN + + G+LD R++
Sbjct: 217 STFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGR 276
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ G PD TYN L++ L K K A L + G +P + TL+ G + G
Sbjct: 277 LIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGM 336
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ + G +PD Y +I GE +A LF+ + KG PNV YN+
Sbjct: 337 VQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I+G G EA + EM +G P +N LV+ L G +++A +++ M+ KG
Sbjct: 397 LIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 286 KY 287
+
Sbjct: 457 YF 458
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 131/284 (46%), Gaps = 5/284 (1%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NGF T+ LI G + + F ++ +P YN ++ L
Sbjct: 350 NGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILE 409
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ +MS++G P++ T+NI++ ++G + L+ M G+ PD T+NIL+H
Sbjct: 410 AAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIH 469
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K AL +L+ M + G DP V + +L++GL + + + M KGC P
Sbjct: 470 GYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAP 529
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
++ + +++ S +L+KA L + M K P+ T+ ++I GFC G D A T+
Sbjct: 530 NLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 244 KEMES---RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ME C+ YN ++ + A ++ + MV++
Sbjct: 590 RKMEEVYMVSCSTP--TYNIIIHAFTEKLNVTMAEKLFQEMVDR 631
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 42/257 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G+ TFNILI T ++ A ++++ + + + P +YN++L+ L
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGV---DPDVYTYNSLLNGLCK 508
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD--- 114
+Y+ + Y+ M ++G AP++ T+NI++ + R KLD+ LL+EM +PD
Sbjct: 509 TSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVT 568
Query: 115 ---------------------------------FHTYNILLHVLGKGDKPLAALNLLNHM 141
TYNI++H + A L M
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ P + ++DG + GN+D F EM G +P + +I +
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Query: 202 EKAQDLFDGMITKGQLP 218
+A + M+ KG +P
Sbjct: 689 YEAAGIIHRMVQKGLVP 705
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 96/225 (42%), Gaps = 1/225 (0%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNI 120
K +E ++G+ + TY ++ GK + +L +M ++ G Y
Sbjct: 22 KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVG 81
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ G+ K A+N+ M +P+V + +M L +G D + M ++G
Sbjct: 82 AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV +T+ + S+ A L + M ++G NV Y +++ GF DE
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M + G + +N L+ L G + E +++ ++++G
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRG 246
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN I+HA + E ++Q+M D PD TY +++ + G +D ++ L EM
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEM 663
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+GF P T +++ L D+ A +++ M + G P ++ T+ D + +
Sbjct: 664 MENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAVN--TIFDHDKK--EV 719
Query: 167 DACKYFFDEMANKGCM 182
A K +++ K C+
Sbjct: 720 AAPKLVLEDLLKKSCI 735
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 2/164 (1%)
Query: 131 PLAALNLLNHM-KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM-ANKGCMPDVVCY 188
P+ AL + N M KE GF ++ + ++++ L G +A + +M N G Y
Sbjct: 20 PMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVY 79
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +Y G++++A ++F+ M P VF+YN+++ +G FD+A + M
Sbjct: 80 VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRD 139
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
RG P+ + + + + A ++ +M +G +++V+
Sbjct: 140 RGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVA 183
>gi|359484268|ref|XP_002278014.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Vitis vinifera]
Length = 641
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 138/280 (49%), Gaps = 1/280 (0%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY-KLIE 65
P + +FNILI +G K E F + + F P +YN +++ + + + +
Sbjct: 234 PFDSCSFNILIRGLCRIGKVDKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHD 293
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ + +S +PD++TY ++ +LGK+++ L + M SG P+ T+NIL++
Sbjct: 294 LLKELLSKNDLSPDVVTYTSIISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGF 353
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
GK ++A N+ M +G P ++ FT+L+DG R G ++ + E+ + P+
Sbjct: 354 GKVGDMVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNE 413
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ ++ + L +A+ + + + F YN +I GFC AG DEA ++ E
Sbjct: 414 YTFAILTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAE 473
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
ME + C P+ + Y L+ G+L+EA + M+ G
Sbjct: 474 MEEKRCKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTG 513
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 111/240 (46%), Gaps = 6/240 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+ +L +L + ++ + VY M+ +G++PD ++ + GK + +D
Sbjct: 139 TYSFLLRSLSEMGFHESAKAVYDCMNIDGHSPDASVLGFLVSSATDAGKFNIARTWVD-- 196
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G YN LL+ L +G++ A+ + F L+ GL R G +
Sbjct: 197 ---GVEFSLVVYNKLLNQLVRGNQVDEAVCFFREQMGLHGPFDSCSFNILIRGLCRIGKV 253
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNS 225
D F+EM GC PDV+ Y +I + E+++ DL +++K L P+V TY S
Sbjct: 254 DKAFELFNEMRGFGCSPDVITYNTLINGFCRVNEVDRGHDLLKELLSKNDLSPDVVTYTS 313
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G+C GK ++A + M S G PN +N L++ G + A + M+ G
Sbjct: 314 IISGYCKLGKMEKASILFNNMISSGIKPNAFTFNILINGFGKVGDMVSAENMYEEMLLLG 373
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 105/244 (43%), Gaps = 35/244 (14%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G A TFNILI G+VG
Sbjct: 334 MISSGIKPNAFTFNILINGFGKVG-----------------------------------D 358
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E +Y++M G PDI+T+ ++ R GK+++ +L E+ SP+ +T+ I
Sbjct: 359 MVSAENMYEEMLLLGCPPDIITFTSLIDGHCRTGKVERSLKLWHELNARNLSPNEYTFAI 418
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + L K ++ A L +K + ++DG +AGN+D EM K
Sbjct: 419 LTNALCKENRLHEARGFLRDLKWRHIVAQPFMYNPVIDGFCKAGNVDEANVILAEMEEKR 478
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD + YT++I + G L +A +F+ M+ G P+ T S+I AG +EA
Sbjct: 479 CKPDKITYTILIIGHCMKGRLSEAISIFNRMLGTGCAPDSITMTSLISCLLKAGMPNEAY 538
Query: 241 TMMK 244
+M+
Sbjct: 539 RIMQ 542
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 122/250 (48%)
Query: 35 KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
K K +RP +Y A++ ++ + E + +M D G P +T V+ A R G
Sbjct: 255 KMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREG 314
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
++ R+ + M G P+ TYN ++ K A+ LL+ M+E G +P V+ +
Sbjct: 315 RMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYN 374
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L+ G G++++ M G D Y V+I + G++++A LFDG+ +
Sbjct: 375 LLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G PN T+N++I G C GKFD ACT +++M S GC P+ Y+ + NL E
Sbjct: 435 GIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREG 494
Query: 275 HEVIRHMVEK 284
I M++K
Sbjct: 495 LSFIDEMLQK 504
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +NG A T ++ G V F KL P +YNA++ + +
Sbjct: 291 MFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGK 350
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM + G PD++TYN+++ + G ++ RLL M +G + D +TYN+
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNV 410
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K K A +L + ++ G P+ + F T+++GL + G D F ++M + G
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD Y+ I + + D M+ K P+ Y +I + A
Sbjct: 471 CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLAT 530
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M S GC+P+ + Y T V N G+L EA V+ M + G
Sbjct: 531 RIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 31/274 (11%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YNA++ AL + + M G+ PD T+N ++ R +LD L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186
Query: 103 LDEMGRSGFS-------------------------------PDFHTYNILLHVLGKGDKP 131
D+M GFS PD +T+ L+ L +
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRG 246
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L +L MKE+G+ P+ + L+D R + + +EM + G +P V T +
Sbjct: 247 EEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAV 306
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ +Y G + A +F+ M KG PNV+TYN+M++GFC GK +A ++ +M G
Sbjct: 307 VNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGV 366
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YN L+ G + A ++R M G
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNG 400
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 4/281 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF A ++ LI E G + +E F + + +P ++ A++ L R+ +
Sbjct: 194 GFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEG 249
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ Q+M + G+ P Y ++ R K ++ ++L+EM +G P T +++
Sbjct: 250 LYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNA 309
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ + A+ + MK G +P+V + ++ G G + D+M G PD
Sbjct: 310 YCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPD 369
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV Y ++I G +E A L M G + +TYN +I C GK DEAC++
Sbjct: 370 VVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+E RG PN + +NT+++ L GK A + MV G
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG 470
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G A D TYN+++ A + GK+D+ L D + G P+ T+N +++ L KG K
Sbjct: 396 MEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGK 455
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M G P ++ ++ L + F DEM K P V YT+
Sbjct: 456 FDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTI 515
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I A ++ M++ G P+V TY + +R +C G+ EA ++ EM+ G
Sbjct: 516 VIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGG 575
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ + YNTL+ + GK A +++HM
Sbjct: 576 IIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT 607
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 6/261 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N+LI C G + A +++ R ++ + +YN ++ AL
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIESAFRLL-RLMEGN--GLAADQYTYNVLIDALCK 417
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + G P+ +T+N V+ + GK D L++M +G +PD +T
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYT 477
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ + L K L+ ++ M + PS +++T ++D L + N + +M
Sbjct: 478 YSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMV 537
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC PDVV YT + +Y G L +A+++ M G + + YN++I G GK D
Sbjct: 538 SLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTD 597
Query: 238 EACTMMKEMESRGCNPNFLVY 258
A T++K M PN +
Sbjct: 598 HAVTILKHMTGVASMPNHFTF 618
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 95/240 (39%), Gaps = 31/240 (12%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP TYN ++ A R L R L M RSG+ PD T+N L+ + + A +
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQD 185
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE--------------------- 175
L + M GF + + L++G G +D F E
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARR 245
Query: 176 ----------MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
M G P Y ++ + + E+A+ + + M G +P T +
Sbjct: 246 GEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTA 305
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +C G+ A + + M+ +GC PN YN +V N GK+ +A ++ M E G
Sbjct: 306 VVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECG 365
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 83/189 (43%), Gaps = 8/189 (4%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-PSVLHFTTL 156
+ H L R F F + +L H PL L L HM G P+ + L
Sbjct: 79 RLHALSPPPLRPLFDRTFRS--LLTHFSRYALTPLM-LRLFAHMYHHGPPAPTGATYNAL 135
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ L R +L + + M G PD + +I Y +L+ AQDLFD M +G
Sbjct: 136 IRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGF 195
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
+ +Y ++I GFC G+ DEA + +E+E P+ + LV L +A + E
Sbjct: 196 SQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLY 251
Query: 277 VIRHMVEKG 285
+++ M E G
Sbjct: 252 MLQKMKELG 260
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 105/267 (39%), Gaps = 28/267 (10%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+ +P +Y ++ L R Y L ++ QM G +PD++TY + A G+L +
Sbjct: 505 DVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564
Query: 100 HRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFT-- 154
++ EM + G D YN L+ +GK D A+ +L HM V P+ HFT
Sbjct: 565 ENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDH---AVTILKHMTGVASMPN--HFTFF 619
Query: 155 --------------TLMDGLSRAGNLDACKYF--FDEMANKGCMPDVVCYTVMITSYIAA 198
+ S ++ F F+ M Y ++ +
Sbjct: 620 ILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEE 679
Query: 199 GELEKAQDLFDGMITKGQLP-NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
L++ L M + LP N Y S++ FC + +A ++ M G PN +
Sbjct: 680 RRLDEVTSLVSHM-KEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLIS 738
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEK 284
Y L+S G+ A E+ R + K
Sbjct: 739 YQYLLSGFTAEGQADRAKEIFRGLRWK 765
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGC-MPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
F +L+ SR F M + G P Y +I + +L AQ M
Sbjct: 96 FRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ G P+ FT+NS+I G+C + D A + +M RG + + + Y L+ G++
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRV 215
Query: 272 AEAHEVIRHMVEKGKYIH 289
EA E+ R + + Y H
Sbjct: 216 DEALELFRELEQPDMYTH 233
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/340 (18%), Positives = 119/340 (35%), Gaps = 51/340 (15%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG T+N+LI + G + F + RP ++N +++ L ++ +
Sbjct: 399 NGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDV 458
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++M G APD TY+ + + + +DEM + P Y I++
Sbjct: 459 ACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVID 518
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K A + M +G P V+ +TT + G L + EM G +
Sbjct: 519 RLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIV 578
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT--------------------- 222
D + Y +I + + G+ + A + M +PN FT
Sbjct: 579 DAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKT 638
Query: 223 ------------------------------YNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
Y +++ GF + DE +++ M+
Sbjct: 639 TSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLP 698
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N +Y +LV+ +A ++ M+ G +L+S
Sbjct: 699 LNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLIS 738
>gi|125590524|gb|EAZ30874.1| hypothetical protein OsJ_14948 [Oryza sativa Japonica Group]
Length = 414
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 2/272 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-RQYKL 63
G+ AR + L+ +C L K+ F R +YN ++ +L+G R + +
Sbjct: 6 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 65
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + + D Y+PD+ ++N+V+ R+G++ + L++ M G SPD T+NIL+
Sbjct: 66 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 125
Query: 124 VLGKGDKPLAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + ++ +L ++ G P+V+ FT+++ G +AG L+ +++M G M
Sbjct: 126 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 185
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ V Y V+I Y G+L A +++ M P+V T++S+I G+C G+ D+A +
Sbjct: 186 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 245
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+M PN ++ ++ +L + EA
Sbjct: 246 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEA 277
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FN++I C G+V A ++VER + F P ++N ++ L + V
Sbjct: 84 SFNVVIKGVCRVGQVQKALELVERMNE---FGCSPDTVTHNILVDGLCRTNEVSRGHEVL 140
Query: 69 QQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++ +G P+++T+ V+ + GKL+ + ++M SG P+ TYN+L++ GK
Sbjct: 141 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 200
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+A+ + M + P V+ F++L+DG R G LD + +MA P+V
Sbjct: 201 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 260
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
++++I S ++A L + + + + P F YN +I C GK DEA + K M
Sbjct: 261 FSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 320
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E +GC P+ Y L+ +++EA MVE G
Sbjct: 321 EEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAG 359
>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
Length = 332
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 127/266 (47%), Gaps = 9/266 (3%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY+ +++ Y +M D+ +P+++TYN ++ A + +D+ +
Sbjct: 10 PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M +SG PD TYN ++H +P A+ L M+ G +P V+ + +LMD L +
Sbjct: 70 LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + FD M +G PD+ Y ++ Y G L + L D M+ G PN +
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++ ++ + K +EA + +M +G NPN + Y T++ L +G++ +A M+
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249
Query: 283 EKG---------KYIHLVSKFKRYKR 299
++G IH + F ++++
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEK 275
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 133/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ T+N +I C V A +V+ +KS + P +YN+I+H
Sbjct: 38 MLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVM---PDCMTYNSIVHGFCS 94
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q K ++M +G PD++TYN +M + G+ + ++ D M + G PD T
Sbjct: 95 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 154
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LL + LL+ M G P+ F+ L+ ++ ++ F +M
Sbjct: 155 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 214
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ V Y +I +G +E A F+ MI +G P+ YNS+I C+ K++
Sbjct: 215 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 274
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + EM RG + + +N+++ + G++ E+ ++ MV G
Sbjct: 275 KAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIG 322
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 126/256 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G T+N ++ G ++ + K + P +YN+++ L +
Sbjct: 73 MVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGR 132
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G PDI TY ++ G L + H LLD M R+G P+ + ++I
Sbjct: 133 CTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 192
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K +K A+ + + M++ G +P+ + + T++D L ++G ++ +F++M ++G
Sbjct: 193 LVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 252
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + Y +I S + EKA++LF M+ +G + +NS+I C G+ E+
Sbjct: 253 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESV 312
Query: 241 TMMKEMESRGCNPNFL 256
+ M G P+ +
Sbjct: 313 KLFDLMVRIGVKPDII 328
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 2/217 (0%)
Query: 71 MSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M+D+G PD+++Y+ V+ ++ G LD+ + +EM SP+ TYN ++ L K
Sbjct: 1 MADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKA 60
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A+ +L M + G P + + +++ G +G F +M + G PDVV Y
Sbjct: 61 QTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTY 120
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ G +A+ +FD M +G P++ TY ++++G+ G E ++ M
Sbjct: 121 NSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR 180
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G +PN V++ LV K+ EA V M ++G
Sbjct: 181 NGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG 217
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T+N L +C G ARK+ + K L +P +Y +L
Sbjct: 108 MRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL---KPDITTYGTLLQGYAT 164
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G P+ ++I++CA + K+++ + +M + G +P+ T
Sbjct: 165 KGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVT 224
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ VL K + A+ M + G P + + +L+ L + + F EM
Sbjct: 225 YGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEML 284
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
++G + + +I S+ G + ++ LFD M+ G P++ T
Sbjct: 285 DRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVRIGVKPDIIT 329
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 147/297 (49%), Gaps = 6/297 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ G T+N LI C G + A K+++ I F P + +Y ++++ L
Sbjct: 312 LVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICK---GFVPDEFTYCSLINGLCQ 368
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +G P ++ YN+++ + G + Q ++++EM +G S D T
Sbjct: 369 NDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWT 428
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN++++ L K A NL+N G+ P V F TL+DG + ++ ++M
Sbjct: 429 YNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMW 488
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PDV+ Y ++ A + E + F+ M+ KG +PN TYN + C AGK +
Sbjct: 489 SHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVN 548
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
EA ++ E+ ++G P+ + + T++S N G L A+++ R M E+ K H + +
Sbjct: 549 EALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATY 605
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G + TFNI I C G + A +++ I+ L P +YN ++ L
Sbjct: 242 VLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGL---TPDVVTYNTLICGLCK 298
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
E ++ + G PD TYN ++ ++G L ++L GF PD T
Sbjct: 299 NSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFT 358
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ L + D+ AL L N G P+V+ + L+ GL + G + +EM+
Sbjct: 359 YCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS 418
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC D+ Y ++I G + A +L + I KG +P+VFT+N++I G+C K +
Sbjct: 419 ENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKME 478
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M S G P+ + YN++++ L A K + E MVEKG
Sbjct: 479 TTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG 526
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 117/243 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +++N +LH L + + E + ++ +G ++ T+NI + R G L +
Sbjct: 214 PDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSM 273
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LD + R G +PD TYN L+ L K + A L+ + G +P + TL+DG +
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L + KG +PD Y +I E+++A LF+ + KG P V
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN +I+G C G +A MM EM GC+ + YN +++ L G +++A+ ++ +
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453
Query: 283 EKG 285
KG
Sbjct: 454 AKG 456
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 135/335 (40%), Gaps = 70/335 (20%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G ++ V+ F + +N P SYNAI++ L+ +K V+ +M + G PD+
Sbjct: 87 GRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDV 146
Query: 81 LTYNI-----------------------------------VMCAKYRLGKLDQFHRLLDE 105
T+ I V+ Y + + L ++
Sbjct: 147 YTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFND 206
Query: 106 MGRSGFSPDFHTYNILLHVLGKG----------DKPL----------------------- 132
M R G PD T+N LLH L K +K L
Sbjct: 207 MLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGM 266
Query: 133 --AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+++L+ + G P V+ + TL+ GL + N+ + + ++ N G PD Y
Sbjct: 267 LSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNT 326
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I Y G L+ A+ + G I KG +P+ FTY S+I G C + D A + +G
Sbjct: 327 LIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKG 386
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P ++YN L+ L G + +A +++ M E G
Sbjct: 387 LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 130/303 (42%), Gaps = 7/303 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ENG + T+N++I C G V A ++ I + P ++N ++
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAK---GYVPDVFTFNTLIDGYCK 473
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M G PD++TYN V+ + K + + M G P+ T
Sbjct: 474 QLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKIT 533
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL L K K AL+L++ + G P + F T++ G + G+L F M
Sbjct: 534 YNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMG 593
Query: 178 NK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ Y +MI ++ +L + LF M G P+ +TY MI GFC+ G
Sbjct: 594 EQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNT 653
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKR 296
D + EM +G P+ + +++ L ++ EA ++I MV G +V+
Sbjct: 654 DSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVNSISE 713
Query: 297 YKR 299
+
Sbjct: 714 ADK 716
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 98/228 (42%), Gaps = 7/228 (3%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH----T 117
K +E + ++G+ +LTY C +LG F + + + + D
Sbjct: 22 KALEMFNKVKREDGFKHSLLTYK---CIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGV 78
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y + G+ K A+++ M +PSVL + +M+ L +G F M
Sbjct: 79 YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMK 138
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G +PDV +T+ I S+ A L + M+++G N Y +++ GF
Sbjct: 139 NVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRV 198
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M G P+ +N L+ L G++ E+ ++ +++KG
Sbjct: 199 EAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG 246
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 124 VLGKGDKPLAALNLLNHMK-EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE--MANKG 180
VL + PL AL + N +K E GF S+L + ++ L GN A + E M
Sbjct: 13 VLKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDN 72
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + V Y + SY G++++A D+F+ M P+V +YN+++ +G F +A
Sbjct: 73 SLLEGV-YIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAH 131
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M++ G P+ + + + + A ++ +MV +G ++ V+
Sbjct: 132 KVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVA 183
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 5/284 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G T+ ++ C G+ A ++ + ++ + P YN I+ L
Sbjct: 208 MLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM--EEVSHIIPNVVIYNTIIDGLWK 265
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++ +M ++ PDI+TYN ++ G+ +LL EM +PD T
Sbjct: 266 DGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVT 325
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L++ K K A L + M PS + +++++DG + LDA ++ F
Sbjct: 326 FSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTP 385
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PD++ + +I Y A ++ L M G + N TY ++I GFC G +
Sbjct: 386 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 445
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A +++EM S G PN + NTL+ L + GKL +A E+ + M
Sbjct: 446 AAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/318 (26%), Positives = 149/318 (46%), Gaps = 46/318 (14%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
P A +F IL+ C+C ++ A + F K F P ++N +LH L +
Sbjct: 113 PCNAYSFTILMKCFCSCSKLPFA---LSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISE 169
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ QM P+++T+ +M R G++ + LLD M G P+ TY ++
Sbjct: 170 ALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 225
Query: 124 VLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK--- 179
+ K ++ALNLL M+EV P+V+ + T++DGL + G F EM K
Sbjct: 226 GMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIF 285
Query: 180 ------GCM--------------------------PDVVCYTVMITSYIAAGELEKAQDL 207
CM PDVV ++ +I +++ G+ +A++L
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+D M+ + +P+ TY+SMI GFC + D A M ++GC+P+ + +NTL++
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCR 405
Query: 268 AGKLAEAHEVIRHMVEKG 285
A ++ + +++ M E G
Sbjct: 406 AKRVDDGIKLLHEMTEAG 423
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 46/296 (15%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++++ + E ++ +G +PDI+T+N ++ R ++D +L
Sbjct: 356 PSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKL 415
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM +G + TY L+H + AA +LL M G P+V+ TL+DGL
Sbjct: 416 LHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCD 475
Query: 163 AGNL-----------------DACKYF-----------------------------FDEM 176
G L DA + F ++EM
Sbjct: 476 NGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEM 535
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++G +PD + Y+ MI L++A +FD M +K P+V T+N++I G+C AG
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMV 595
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D+ + EM RG + + Y TL+ R + A ++ + M+ G Y ++
Sbjct: 596 DDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 121/277 (43%), Gaps = 17/277 (6%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN LI C V K++ ++ L +Y ++H + + +
Sbjct: 395 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLV---ANTITYTTLIHGFCQVGDLNAAQDLL 451
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-----------GFSPDFHT 117
Q+M G P+++T N ++ GKL + M +S G PD T
Sbjct: 452 QEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQT 511
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K L A L M G P + +++++DGL + LD FD M
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 571
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K PDVV + +IT Y AG ++ +LF M +G + + TY ++I GF D
Sbjct: 572 SKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNID 631
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A + +EM S G P+ + +++ L + +L A
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERA 668
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 116/261 (44%), Gaps = 17/261 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ LI C G++ A+ +++ I S + P + N +L L
Sbjct: 419 MTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVC---PNVVTCNTLLDGLCD 475
Query: 58 IRQYKLIEWVYQQMSDE-----------GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ K +++ M G PD+ TYNI++C GK + L +EM
Sbjct: 476 NGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEM 535
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY+ ++ L K + A + + M F P V+ F TL+ G +AG +
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMV 595
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM +G + D + Y +I + ++ A D+F MI+ G P+ T +M
Sbjct: 596 DDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNM 655
Query: 227 IRGFCMAGKFDEACTMMKEME 247
+ G + + A M+++++
Sbjct: 656 LTGLWSKEELERAVAMLEDLQ 676
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 5/216 (2%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P ++ + +M R+G+ D L +M + +++ IL+ K AL+
Sbjct: 79 PSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ ++GF P+V+ F TL+ GL + F +M C P+VV +T ++
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCR 194
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG-CNPNFL 256
G + +A L D M+ G PN TY +++ G C G A ++++ME PN +
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVV 254
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+YNT++ L G+ ++AH + M EK + +V+
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290
>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g25630-like [Glycine max]
Length = 632
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 152/338 (44%), Gaps = 41/338 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF-IKSKLFNFRPFKNSYNAILHALLGIR 59
M E+G +A T+N LI G G + ++ + S N +P +YN ++ AL +
Sbjct: 168 MKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKME 227
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
V +M+ G PD++T+N + A + GK Q ++ EM R+ P+ T
Sbjct: 228 NISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCT 287
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPS------------------------------ 149
I++ + K AL + MK++G P+
Sbjct: 288 IIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEF 347
Query: 150 -----VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
V+ ++T+M+ S+AG L+ CK ++ M G PD Y+++ Y+ A E+EKA
Sbjct: 348 QIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKA 407
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+++ M G PNV + ++I G+C G+ D A + +M G +PN + TL+
Sbjct: 408 EEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWG 467
Query: 265 LRNAGKLAEAHEVIR-----HMVEKGKYIHLVSKFKRY 297
A + +A +++ H+ K I LV++ R+
Sbjct: 468 YAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRF 505
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 112/243 (46%), Gaps = 1/243 (0%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +Y +L+AL + +K I + + ++ PD + +N ++ A G ++ +
Sbjct: 104 QPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKK 163
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG-FDPSVLHFTTLMDGL 160
++ +M SG P TYN L+ G KP ++ LL+ M G P++ + L+ L
Sbjct: 164 VVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRAL 223
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ N+ +M G PDVV + + T+Y G+ +A+ + M PN
Sbjct: 224 CKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNE 283
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T +I G+C GK EA + M+ G PN +V N+LV+ + EV++
Sbjct: 284 RTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKL 343
Query: 281 MVE 283
M E
Sbjct: 344 MEE 346
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 1/239 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+NA+++A + + V Q+M + G P TYN ++ GK D+ +LLD M
Sbjct: 145 FNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMS 204
Query: 108 RSG-FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ TYN+L+ L K + A N++ M G P V+ F T+ ++ G
Sbjct: 205 TEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKT 264
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ EM P+ T++I+ Y G++++A M G PN+ NS+
Sbjct: 265 AQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLIVLNSL 324
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ GF D ++K ME P+ + Y+T+++ AG L + E+ +M++ G
Sbjct: 325 VNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSG 383
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 116/255 (45%), Gaps = 6/255 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N RT I+I C G+V A + V R K +P N++++ +
Sbjct: 274 MQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRM---KDLGMQPNLIVLNSLVNGFVD 330
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ V + M + PD++TY+ +M A + G L++ + + M +SG PD H
Sbjct: 331 MMDRDGVDEVLKLMEEFQIRPDVITYSTIMNAWSQAGFLEKCKEIYNNMLKSGVKPDAHA 390
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+IL + + A +L M + G P+V+ FTT++ G G +D FD+M
Sbjct: 391 YSILAKGYVRAQEMEKAEEMLTVMTKSGVHPNVVIFTTVISGWCSVGRMDNAMRVFDKMG 450
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P++ + +I Y A + KA+ + M P T + + AG +
Sbjct: 451 EFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIMEEFHVQPKKSTILLVAEAWRFAGFKE 510
Query: 238 EACTMMKEMESRGCN 252
A T+++ ++++ N
Sbjct: 511 RAKTLLRTVKAKMAN 525
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++Q + + G+ P + TY ++ A H ++ + PD +N L++
Sbjct: 94 IFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFA 153
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM-PDV 185
+ A ++ MKE G PS + TL+ G AG D D M+ +G + P++
Sbjct: 154 ESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNL 213
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y ++I + + +A ++ M G P+V T+N++ + GK +A M+ E
Sbjct: 214 KTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVTFNTIATAYAQNGKTAQAEAMILE 273
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
M+ PN ++S GK+ EA + M + G +L+
Sbjct: 274 MQRNSLKPNERTCTIIISGYCREGKVQEALRFVYRMKDLGMQPNLI 319
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 86/173 (49%), Gaps = 1/173 (0%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++++L K KP A+ + ++ E G PS+ +TTL++ L+ + K
Sbjct: 78 VMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQ 137
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + + +I ++ +G +E A+ + M G P+ TYN++I+G+ +AGK DE+
Sbjct: 138 MKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESM 197
Query: 241 TMMKEMESRG-CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ M + G PN YN L+ L ++EA V+ M G +V+
Sbjct: 198 KLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMTASGMQPDVVT 250
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 69/165 (41%), Gaps = 18/165 (10%)
Query: 139 NHMKEV------GFDPS------------VLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
NHM E+ G PS V T +M+ L ++G F + G
Sbjct: 43 NHMNEITKATNSGSQPSCTFCMGKNDCQIVRSRTKVMNILIKSGKPQEAIVIFQNLIEGG 102
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P + YT ++ + + + + K P+ +N++I F +G ++A
Sbjct: 103 HQPSLATYTTLLNALTTQKYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAK 162
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++M+ G P+ YNTL+ AGK E+ +++ M +G
Sbjct: 163 KVVQKMKESGLKPSACTYNTLIKGYGIAGKPDESMKLLDLMSTEG 207
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 130/277 (46%), Gaps = 7/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T N+L+ C ++ A KV++ L P +Y IL + + + V
Sbjct: 191 TCNLLVKALCKKNDIESAYKVLDEIPAMGLV---PNLVTYTTILGGYVARGDMESAKRVL 247
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M D G+ PD +TY ++M +LG+ + ++D+M ++ P+ TY +++ L K
Sbjct: 248 EEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 307
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A N+ + M + F P ++D L +D + +M CMPD
Sbjct: 308 KKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 367
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I G + +A+ LFD KG +P++ TYN++I G C G+ EA + +M
Sbjct: 368 STLIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFE 426
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
R C PN YN L+ L G + E V+ M+E G
Sbjct: 427 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESG 463
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 141/296 (47%), Gaps = 7/296 (2%)
Query: 2 IENGFPTTARTFNILICTCGEVGLA---RKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+ N +P N+ I GLA + F++ F + S N +L+ L+
Sbjct: 107 LRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQN 166
Query: 59 RQYKLIEWVYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ L+ +++ + G P+I T N+++ A + ++ +++LDE+ G P+ T
Sbjct: 167 QRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVT 226
Query: 118 YNILLH-VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y +L + +GD +A +L M + G+ P + +T LMDG + G D+M
Sbjct: 227 YTTILGGYVARGDME-SAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDM 285
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
P+ V Y VMI + + +A+++FD M+ + +P+ +I C K
Sbjct: 286 EKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKV 345
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
DEAC + ++M C P+ + +TL+ L G+++EA ++ +KG L++
Sbjct: 346 DEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEF-DKGSIPSLLT 400
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 116/244 (47%), Gaps = 5/244 (2%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN--IVMCAKYRL-GKLDQFHRL 102
++Y++IL L R + +E + + + Y P N I + Y L G+ + R+
Sbjct: 82 DTYHSILFKLSRARAFDPVESLMADLRN-SYPPIKCGENLFIDLLRNYGLAGRYESSMRI 140
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDK-PLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ G + N LL+VL + + L N + G P++ L+ L
Sbjct: 141 FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALC 200
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ ++++ DE+ G +P++V YT ++ Y+A G++E A+ + + M+ +G P+
Sbjct: 201 KKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAI 260
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY ++ G+C G+F EA T+M +ME PN + Y ++ L K EA + M
Sbjct: 261 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 320
Query: 282 VEKG 285
+++
Sbjct: 321 LDRS 324
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/284 (19%), Positives = 116/284 (40%), Gaps = 45/284 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ A T+ +L+ C G A V++ K+++ P + +Y ++ AL
Sbjct: 250 MLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEI---EPNEVTYGVMIRALCK 306
Query: 58 IRQYKLIEWVYQQMSDEGYAPDI-LTYNIV--MCAKYRL--------------------- 93
++ ++ +M D + PD L ++ +C +++
Sbjct: 307 EKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNAL 366
Query: 94 -----------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
G++ + +L DE + G P TYN L+ + + + A L + M
Sbjct: 367 LSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMF 425
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E P+ + L++GLS+ GN+ +EM GC P+ + ++ G+ E
Sbjct: 426 ERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEE 485
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
A + + G++ + ++ + F G+ D+ +KE+
Sbjct: 486 DAIKIVSMAVMNGKV-DKESWELFLNKF--VGELDKGVLALKEL 526
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 7/188 (3%)
Query: 110 GFSPDFHTYNILLHVLGKGD--KPLAAL--NLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
GF+ ++ TY+ +L L + P+ +L +L N + ++ F L+ AG
Sbjct: 76 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENL--FIDLLRNYGLAGR 133
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-DGMITKGQLPNVFTYN 224
++ F + + G V ++ I + +F + + G PN+FT N
Sbjct: 134 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 193
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+++ C + A ++ E+ + G PN + Y T++ G + A V+ M+++
Sbjct: 194 LLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 253
Query: 285 GKYIHLVS 292
G Y ++
Sbjct: 254 GWYPDAIT 261
>gi|224098475|ref|XP_002334555.1| predicted protein [Populus trichocarpa]
gi|222873072|gb|EEF10203.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M +GY PD+ YNI++ + ++D+ +L +EM G +PD TYN L+H L
Sbjct: 16 LFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLC 75
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A +L +M + G P + ++ L+DGL + G L F M + PD+V
Sbjct: 76 QLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLV 135
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +++ + +G L+ A++LF + KG PNV Y ++I G C G DEA + M
Sbjct: 136 MYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 195
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E GC P+ YN ++ + A +I M ++G
Sbjct: 196 EEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 234
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 3/231 (1%)
Query: 20 CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
C EV ARK+ + I ++P YN +++ + + +Y +M +G PD
Sbjct: 7 CMEVVEARKLFDVMITK---GYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPD 63
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+TYN ++ +LG+L + L M ++G PD Y+ILL L K A L
Sbjct: 64 KVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFR 123
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M+ P ++ + L+D + ++GNL + F E+ KG P+V YT +I G
Sbjct: 124 AMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEG 183
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
L++A + F M G P+ F+YN +IRGF A ++ EM RG
Sbjct: 184 LLDEALEAFRNMEEDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRG 234
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 89/186 (47%)
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
+L D M G+ PD YNIL++ K + A L N M G P + + TL+ G
Sbjct: 14 RKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHG 73
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L + G L + F M G +PD+ Y++++ G L KA LF M + P+
Sbjct: 74 LCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPD 133
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ YN ++ C +G +A + E+ +G PN +Y T+++ L G L EA E R
Sbjct: 134 LVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFR 193
Query: 280 HMVEKG 285
+M E G
Sbjct: 194 NMEEDG 199
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%)
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ A L + M G+ P V + L++G +A +D K ++EM +G PD V Y +
Sbjct: 11 VEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTL 70
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I G L +AQDLF M G LP++F Y+ ++ G C G +A + + M+S
Sbjct: 71 IHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSL 130
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ ++YN LV + +G L +A E+ + KG
Sbjct: 131 KPDLVMYNILVDAMCKSGNLKDARELFSELFVKG 164
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G+ +NILI C + A+++ I L P K +YN ++H L
Sbjct: 20 MITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMI---LQGLTPDKVTYNTLIHGLCQ 76
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +++ M G PD+ Y+I++ + G L + RL M S PD
Sbjct: 77 LGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFRLFRAMQSSSLKPDLVM 136
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ + K A L + + G P+V +TT+++GL + G LD F M
Sbjct: 137 YNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLCKEGLLDEALEAFRNME 196
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
GC PD Y V+I ++ + +A L M +G + +V T
Sbjct: 197 EDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFIADVGT 241
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 64/125 (51%)
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
M G S + + FD M KG PDV CY ++I Y A ++KA+ L++ MI +G
Sbjct: 1 MYGYSLCMEVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGL 60
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ TYN++I G C G+ EA + K M G P+ Y+ L+ L G L +A
Sbjct: 61 TPDKVTYNTLIHGLCQLGRLREAQDLFKNMHKNGNLPDLFAYSILLDGLCKQGYLGKAFR 120
Query: 277 VIRHM 281
+ R M
Sbjct: 121 LFRAM 125
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%)
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
E+ +A+ LFD MITKG P+VF YN +I G+C A + D+A + EM +G P+ + YN
Sbjct: 9 EVVEARKLFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYN 68
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
TL+ L G+L EA ++ ++M + G
Sbjct: 69 TLIHGLCQLGRLREAQDLFKNMHKNG 94
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GE+ R + F + K F P SY ++H L+ ++ M ++G D
Sbjct: 563 GEIEKGRAL---FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
YN V+ + GK+++ ++LL+EM G P TY ++ L K D+ A L
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
K G + +V+ +++L+DG + G +D +E+ KG P+V + ++ + + A E
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A F M PN TY+ +I G C KF++A +EM+ +G PN Y T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++S L AG + EA + EKG
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKG 824
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM D P+ + Y ++ ++ G+ + H++ +EM R G SPD N + +
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L +K +GF P +T L+ GL +AG F M +GC+ D
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR 620
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + +G++ KA L + M TKG P V TY S+I G + DEA + +E
Sbjct: 621 AYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S+G N ++Y++L+ G++ EA+ ++ +++KG
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 118/241 (48%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P N+ I+ + + R+ + Q M + P Y ++ A D
Sbjct: 161 FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCML 220
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +M G++ + H + L+ V + + AAL+LL+ MK +P V+ + +D
Sbjct: 221 TLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCF 280
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+AG +D FF EM G + D V YT MI A L +A +LF+ M Q+P
Sbjct: 281 GKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCA 340
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+ YN+MI G+ MAGKF++A ++++ +GC P+ + YN ++S L G++ EA +
Sbjct: 341 YAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEE 400
Query: 281 M 281
M
Sbjct: 401 M 401
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 8/281 (2%)
Query: 19 TCGEVGLA----RKVVERFI---KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TC E+ L+ RK+ E F + FRP ++Y ++ AL R + ++QQM
Sbjct: 167 TCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM 226
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ GYA ++ + ++ R G++D LLDEM + PD YN+ + GK K
Sbjct: 227 QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKV 286
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + MK G + +T+++ L +A L+ F+ M +P Y M
Sbjct: 287 DMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM 346
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I Y AG+ E A L + KG +P+V +YN ++ G+ DEA +EM+ +
Sbjct: 347 IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDA 405
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN YN ++ L AGKL A V M + G + ++++
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y +M G +PD+L N M ++ G++++ L E+ GF PD +Y IL+H L
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A L MKE G + T++DG ++G ++ +EM KG P VV
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I L++A LF+ +KG NV Y+S+I GF G+ DEA +M+E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+G PN +N L+ L A +++EA
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEA 743
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 147/294 (50%), Gaps = 7/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++ P + T+NI+I C G++ A V + + LF P + N ++ L
Sbjct: 401 MKKDAIPNLS-TYNIMIDMLCKAGKLETALVVRDAMKDAGLF---PNVITVNIMVDRLCK 456
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +++ + + PD +TY ++ R G++D+ ++L ++M + P+
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K + + N M +G P +L T MD + +AG ++ + F E+
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G +PD YT++I + AG +A +LF M +G + + YN++I GFC +GK +
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+A +++EM+++G P + Y +++ L +L EA+ + KG +++V
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 144/292 (49%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G R +N +I C G+V A +++E +K+K P +Y +++ L
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE-MKTK--GHEPTVVTYGSVIDGLAK 666
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +++E+ + G +P+ +T
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL MK++ P+ + ++ L+ GL + + F+ EM
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+V YT MI+ AG + +A LF+ KG + + YN++I G A +
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRAS 846
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+A + +E +GC+ L+ +L A + +A V + E K H
Sbjct: 847 DAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQH 898
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++N ++ G G + +++F + K + P ++YN ++ L + + V M
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAM 435
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G P+++T NI++ + +LD + + + PD TY L+ LG+ +
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L M + P+ + +T+L+ + G + ++EM GC PD++
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ AGE+EK + LF + G +P+ +Y +I G AG EA + M+ +GC
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGC 615
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNT++ +GK+ +A++++ M KG
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 142/308 (46%), Gaps = 41/308 (13%)
Query: 21 GEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
G GL + + + +++ P SYN +L LL K++ V+ +M +G +P
Sbjct: 157 GRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPT 216
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS--------------------------- 112
+ T+ +VM A + ++D LL +M R G
Sbjct: 217 VYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLE 276
Query: 113 --------PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
PD +T+N +H L K + A L++ M GF P+ + LM GL R G
Sbjct: 277 EMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG 336
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-DGMITKGQLPNVFTY 223
+D + +++ N P+VV + +I Y++ G L++A+ + + M++ G P++FTY
Sbjct: 337 KVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTY 392
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N++I G C G A +M EM+ +GC PN + Y L+ G+L EA V+ M
Sbjct: 393 NTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSG 452
Query: 284 KGKYIHLV 291
KG ++ V
Sbjct: 453 KGLALNAV 460
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 153/324 (47%), Gaps = 32/324 (9%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSY--------- 48
M+ GF + T+ +L +C G+V AR ++ + + F N Y
Sbjct: 313 MLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGYVSRGRLDEA 372
Query: 49 NAILHA-----------------LLGI-RQYKLIEW--VYQQMSDEGYAPDILTYNIVMC 88
A++H +LG+ ++ L+ + +M +G P+++TY I++
Sbjct: 373 KAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 432
Query: 89 AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
+ G+L++ +LDEM G + + YN L+ L K +K ALN+ M G P
Sbjct: 433 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 492
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+ F +L+ GL + + + +M +G + + + Y +I +++ G +++A L
Sbjct: 493 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 552
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M+ +G + TYN +I+ C AG ++ + ++M S+G NPN + N L++ L
Sbjct: 553 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 612
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
G + A E +R M+ +G +V+
Sbjct: 613 GNIQHALEFLRDMIHRGLTPDIVT 636
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ ILI C G + AR V++ + K YN ++ AL + + ++
Sbjct: 426 TYTILIDRFCKEGRLEEARNVLDE-MSGKGLALNAV--GYNCLISALCKDEKVQDALNMF 482
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS +G PDI T+N ++ ++ K ++ L +M G + TYN L+H +
Sbjct: 483 GDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRR 542
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL L+N M G + + L+ L RAGN++ F++M +KG P+ +
Sbjct: 543 GAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISC 602
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I G ++ A + MI +G P++ TYNS+I G C G+ EA + +++
Sbjct: 603 NILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQV 662
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + YNTL+S G +AH ++ V+ G
Sbjct: 663 EGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSG 699
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P ++N+++ L + +++ +YQ M EG + +TYN ++ A R G + + +
Sbjct: 491 KPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALK 550
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+++M G D TYN L+ L + L L M G +P+ + L++GL
Sbjct: 551 LVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC 610
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R GN+ F +M ++G PD+V Y +I G ++A +LFD + +G P+
Sbjct: 611 RTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAI 670
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
TYN++I C G FD+A ++ G PN + + LVSN G
Sbjct: 671 TYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 718
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM- 106
Y ++ L ++K I+ + QM EG + ++M R G Q RLL +M
Sbjct: 114 YYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMR 173
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P F +YN++L VL G+ P N+ M G P+V F +M L +
Sbjct: 174 GVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEV 233
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D+ +M GC+P+ + Y +I + G + + L + M+ G +P+V T+N
Sbjct: 234 DSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDA 293
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
I G C + EA ++ M RG PN Y L+ L GK+ EA ++
Sbjct: 294 IHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 2/203 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALLGIR 59
M+ G T+N LI G ++ + + + LF P + +YN ++ AL
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEAL-KLVNDMLFRGCPLDDITYNGLIKALCRAG 578
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +++ M +G P+ ++ NI++ R G + L +M G +PD TYN
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 638
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L++ L K + ALNL + ++ G P + + TL+ + G D +
Sbjct: 639 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDS 698
Query: 180 GCMPDVVCYTVMITSYIAAGELE 202
G +P+ V + ++++++I G+ E
Sbjct: 699 GFIPNEVTWYILVSNFIKEGDQE 721
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 117/224 (52%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M++EG+ PDI+ Y+ + ++ ++DQ +L ++ G+ PD YNIL+ L K
Sbjct: 454 DMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQ 513
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A NLL+ M+E G PS + + TL+DGL + +L+ F M K P+V+ Y+
Sbjct: 514 RIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYS 573
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I AG + A L++ M KG P+ Y + I G G+ +EA ++EME R
Sbjct: 574 TLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEER 633
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
P+ VY L++ A E+++ MV+KGK+ L K
Sbjct: 634 EMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPDLHDK 677
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 128/251 (50%), Gaps = 2/251 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +++ +++ L+ L +++ M+ G PD+L YN ++ +L + L
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGL 381
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM SG P T N + L + AL+LL M+ G P + H T+L+ L +
Sbjct: 382 LQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCK 441
Query: 163 AG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
G ++ACK+ D MA +G PD+V Y+ + I E+++A LF + +G P+V
Sbjct: 442 HGKEVEACKFLVD-MAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVI 500
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
YN +I+G C + EA ++ EME +G P+ + YNTL+ L L EA + M
Sbjct: 501 AYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMM 560
Query: 282 VEKGKYIHLVS 292
+EK + ++++
Sbjct: 561 IEKEREPNVIT 571
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 122/279 (43%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + TF+I+I + G V F +P YN ++ L + +
Sbjct: 321 PPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCG 380
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ Q+M + G P T N + R + LL +M G P L+ L
Sbjct: 381 LLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELC 440
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K + A L M E GF P ++ ++ +DGL + +D F ++ +G PDV+
Sbjct: 441 KHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVI 500
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I + +AQ+L M KG +P+ TYN++I G C +EA + M
Sbjct: 501 AYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMM 560
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ PN + Y+TL++ L NAG+ +A + M KG
Sbjct: 561 IEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKG 599
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ ++M G+ P I ++ + GK + + L +M GF PD Y+ L L
Sbjct: 416 LLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLI 475
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + AL L + G+ P V+ + L+ GL + + + EM KG +P V
Sbjct: 476 KIQEVDQALKLFQDICAQGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAV 535
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I LE+A MI K + PNV TY+++I G C AG+ D+A + EM
Sbjct: 536 TYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEM 595
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+GC P+ + Y + L N G+ EA +R M E+
Sbjct: 596 GRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLREMEER 633
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 111/268 (41%), Gaps = 50/268 (18%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ ++ D G+ D ++I++ A + GK+D+ L++ M + T+ L++
Sbjct: 123 VFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFV 181
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + AL+L + MK+ GF P + + ++ GL ++ + EM PDV
Sbjct: 182 KESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVK 241
Query: 187 CYTVMITSY---------------------------------IAAGELEKAQDLFDGM-- 211
T +I+S+ + G + KA L +
Sbjct: 242 IVTKLISSFSKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITI 301
Query: 212 ---ITKGQL-----------PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
I G++ PN T++ +I G G D A + ++M GC P+ L+
Sbjct: 302 GNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLL 361
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN L+ L + +L E+ +++ M E G
Sbjct: 362 YNNLIDGLCTSNRLQESCGLLQEMEESG 389
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 117/303 (38%), Gaps = 22/303 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E +TF LI + K + F K K F P + Y+ I+ L +
Sbjct: 161 MEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKD 220
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT--Y 118
K +Y +M PD+ IV K ++ +EM P T Y
Sbjct: 221 VKKALCLYSEMKGFKIQPDV---KIVTKLISSFSKEEELTCFFEEM-HEDMDPKASTLLY 276
Query: 119 NILLHVLGKGDKPLAALNLLNHMK--------EVG--------FDPSVLHFTTLMDGLSR 162
N +L+ L A +LL + E+G P+ F+ +++GL +
Sbjct: 277 NSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIK 336
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G+LD F +MA GC PD++ Y +I + L+++ L M G P FT
Sbjct: 337 TGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEESGIEPTSFT 396
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
N + C A ++K+M G P +LV L GK EA + + M
Sbjct: 397 NNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEACKFLVDMA 456
Query: 283 EKG 285
E+G
Sbjct: 457 EEG 459
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 5/238 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY +L L L+E ++M D G+ D T V+ + + D+ +
Sbjct: 64 PNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDV 123
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+E+ G+ D + ++IL+ K K A L+ M+E + F +L+ G +
Sbjct: 124 FNEIHDRGWV-DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVK 182
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+D + FD+M G PD+ Y V+I +++KA L+ M P+V
Sbjct: 183 ESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKI 242
Query: 223 YNSMIRGFCMAGKFDEACTMMKEM-ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+I F K +E +EM E + L+YN+++++L + G + +A+ +++
Sbjct: 243 VTKLISSF---SKEEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQ 297
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 80/166 (48%), Gaps = 2/166 (1%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGF-DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ LG + A L + ++++G P+ +T L++ LS++ +D + EM +
Sbjct: 36 LIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDH 95
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G D T ++ Y E +KA D+F+ + +G + + + ++ ++ F GK D+A
Sbjct: 96 GWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWV-DEYVFSILVLAFSKWGKVDKA 154
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C +++ ME + N + +L+ ++ +A + M + G
Sbjct: 155 CELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSG 200
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 137/281 (48%), Gaps = 11/281 (3%)
Query: 16 LICTCGEVGLARKVVERFIK--SKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
++ CG+ G + RF SK R ++Y A++ L +RQ+ + + ++M
Sbjct: 128 VLSRCGDAG---NLAYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQ 184
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHR---LLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
E P ++T + + R H+ +LDEM + G PD + + LL L K
Sbjct: 185 EN--PHLITPQVFVILMRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGS 242
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A +L M+ + PSV HFT+L+ G + G L K+ +M + G PD+V Y
Sbjct: 243 VKEAASLFEDMR-YRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNN 301
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
++ Y AG++ A DL M K PN +Y +I+ C + +EA + EM++ G
Sbjct: 302 LLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNG 361
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
C + + Y+TL+S GK+ +E++ M+++G + + V
Sbjct: 362 CQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQV 402
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 130/271 (47%), Gaps = 8/271 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW--VYQQMSDE 74
+C G V A + E + ++P + ++L+ ++ KL+E V QM D
Sbjct: 237 LCKNGSVKEAASLFEDM----RYRWKPSVKHFTSLLYGW--CKEGKLMEAKHVLVQMKDM 290
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G PDI+ YN ++ + GK+ + LL EM R P+ +Y +L+ L K ++ A
Sbjct: 291 GIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEA 350
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L M+ G V+ ++TL+ G + G + DEM +G P+ V Y ++ +
Sbjct: 351 TRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLA 410
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ ELE+ ++L + M G P++ YN++IR C G+ E + EMES G +P
Sbjct: 411 HEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPG 470
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +++ G L EA E + MV +G
Sbjct: 471 MDTFVIMINGFLEQGCLVEACEYFKEMVGRG 501
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 115/248 (46%), Gaps = 17/248 (6%)
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R Y+L++ + QQ G+ P+ + Y +M A + +L++ L++EM + G +PD Y
Sbjct: 384 RGYELLDEMIQQ----GHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIY 439
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEMA 177
N ++ + K + + L N M+ G P + F +++G G L +AC+YF EM
Sbjct: 440 NTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYF-KEMV 498
Query: 178 NKG--CMPDVVCYTVMITSYIAAGELEKAQDLFDGMI-TKGQLPNVFTYNSMIRGFCMAG 234
+G P ++ S + A +LE A+D ++ + +KG NV + I G
Sbjct: 499 GRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKG 558
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLR---NAGKLAEAHEVIRHMVEKGKYIHLV 291
EAC+ +M + PN + L+ L+ N AE E +R M +
Sbjct: 559 HVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKKLYNRQFAAEITEKVRKMAADRQIT--- 615
Query: 292 SKFKRYKR 299
FK YKR
Sbjct: 616 --FKMYKR 621
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 108/236 (45%), Gaps = 9/236 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG T++ LI C G++ ++++ I+ F P + Y I+ A
Sbjct: 357 MQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHF---PNQVIYQHIMLAHEK 413
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +M G APD+ YN V+ +LG++ + +L +EM SG SP T
Sbjct: 414 KEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDT 473
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ I+++ + + A M G P LM+ L RA L+ K ++
Sbjct: 474 FVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNC 533
Query: 176 M-ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+ A+KGC +V +T+ I + + G +++A M+ K +PN T+ ++ G
Sbjct: 534 ITASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGL 589
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 3/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G V R+ E F + P +++Y A+++ I Q + E + M G
Sbjct: 259 CRAGNV---RRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVG 315
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+ + +N ++ R +D+ + M + G D +TYN L L + ++ A NL
Sbjct: 316 INQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNL 375
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M E G P+ + +TTL+ G++ + F EMA G P +V Y VM+ YI
Sbjct: 376 LRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIK 435
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + +A+ M KG +P++++Y +++ G C+ GK D A + +EM+ RG PN +
Sbjct: 436 KGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y L+S L G+ EA ++ +M+ G
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDG 523
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 35/240 (14%)
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
L+ ++V+ + G++ +LLDEM R G + YN LL + +L
Sbjct: 144 LSASVVVDGYCKSGRVAHARQLLDEMPRHGVKVNALCYNSLLDAYTREKDDDRVAEMLKV 203
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G +P+V +T L+DGLS A ++ + F+EM +K DV Y+ +I +Y AG
Sbjct: 204 MENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGN 263
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV--- 257
+ +A ++FD + G PN TY ++I GFC G+ + A ++ +M+ RG N +V
Sbjct: 264 VRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNT 323
Query: 258 --------------------------------YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YNTL LR A ++ EA ++R M+EKG
Sbjct: 324 MIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKG 383
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 3/207 (1%)
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
I+ + ++M G D+ TYN + C R ++D+ LL M G P+ +Y L+
Sbjct: 340 IKMIMEKM---GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLIS 396
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + A L M G +PS++ + +MDG + G++ + F EM KG +P
Sbjct: 397 IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVP 456
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D+ Y ++ + G+++ A LF+ M +G PN+ Y ++I G G+ +EA +
Sbjct: 457 DIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLY 516
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G P+ +Y+ LV +L K
Sbjct: 517 DNMLGDGLTPDDALYSALVGSLHTDKK 543
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 122/287 (42%), Gaps = 35/287 (12%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +Y ++ L R +E V+++M + + D+ Y+ V+ A R G + +
Sbjct: 209 IEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYCRAGNVRRAS 268
Query: 101 RLLDEMGRSGFSPDFHTYNIL-------------------LHVLGKGDKPLA-------- 133
+ DE +G P+ HTY L + V G G +
Sbjct: 269 EVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDGY 328
Query: 134 --------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
AL + M+++G + V + TL GL RA +D K M KG P+
Sbjct: 329 CRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPNH 388
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V YT +I+ + G++ +A+ LF M G P++ TYN M+ G+ G EA KE
Sbjct: 389 VSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKE 448
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
ME +G P+ Y LV GK+ A + M ++G +LV+
Sbjct: 449 MEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 126/286 (44%), Gaps = 3/286 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P +A C G V AR++++ + + YN++L A + +
Sbjct: 143 PLSASVVVDGYCKSGRVAHARQLLDEMPR---HGVKVNALCYNSLLDAYTREKDDDRVAE 199
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M +EG P + TY I++ + + + +EM S D + Y+ +++
Sbjct: 200 MLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYFYSSVINAYC 259
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A + + G +P+ + L++G + G ++A + +M +G + +
Sbjct: 260 RAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQI 319
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ MI Y ++KA ++ M G +V+TYN++ G A + DEA +++ M
Sbjct: 320 VFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIM 379
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+G PN + Y TL+S N G + EA + R M G LV+
Sbjct: 380 IEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVT 425
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 5 GFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N L C + A+ ++ I+ + RP SY ++ + +
Sbjct: 348 GIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGV---RPNHVSYTTLIS--IHCNEG 402
Query: 62 KLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++E ++++M+ G P ++TYN++M + G + + R EM + G PD ++Y
Sbjct: 403 DMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYA 462
Query: 120 ILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
L+H V GK D AL L MK+ G P+++ +T L+ GL++ G + +D M
Sbjct: 463 ALVHGHCVNGKVD---VALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDNM 519
Query: 177 ANKGCMPDVVCYTVMITS 194
G PD Y+ ++ S
Sbjct: 520 LGDGLTPDDALYSALVGS 537
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G ++ LI C G++ AR++ + P +YN ++ +
Sbjct: 379 MIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGN---GAEPSLVTYNVMMDGYIK 435
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E ++M +G PDI +Y ++ GK+D RL +EM + G P+
Sbjct: 436 KGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVA 495
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
Y L+ L K + A L ++M G P ++ L+ L
Sbjct: 496 YTALISGLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSL 538
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 141/320 (44%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G + T+N LI E G +E + N RP + +YN ++ +
Sbjct: 380 MMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKH 439
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M + P ++TYN ++ + + G D ++LLD + +G PD TY++
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSV 499
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L K + A +L N +KE G + + +T L+DG +AG +D + M ++
Sbjct: 500 FIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSED 559
Query: 181 CMPD-----------------------------------VVCYTVMITSYIAAGELEKAQ 205
C+P+ V YT++I + G+ + A
Sbjct: 560 CLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHAN 619
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+F+ M++ G P+V+TY + I +C +G EA MM M G P+ L Y L+S
Sbjct: 620 RVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY 679
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G +A V++ M++ G
Sbjct: 680 ERLGLAYDAFNVLKRMLDAG 699
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++ +I E G + + F K + + P +Y I+HAL G + ++ +M
Sbjct: 286 SYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEM 345
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL---------- 121
+ P++ TY +++ A + KLD+ R+L+EM G P TYN L
Sbjct: 346 RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRI 405
Query: 122 ---LHVLG----------------------KGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
L +LG K A+ LL+ M E PS++ + +L
Sbjct: 406 EAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSL 465
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ +AG+ D+ D + G +PD Y+V I + + +E+A DLF+ + KG
Sbjct: 466 IHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGI 525
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
N Y ++I G C AGK DEA ++++ M S C PN YN+L+ + GK+ E
Sbjct: 526 KANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLS 585
Query: 277 VIRHMVEKG 285
++ +M + G
Sbjct: 586 MVENMSKMG 594
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 134/265 (50%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+ + T+N LI C G A K+++ ++ L P + +Y+ + L
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLV---PDQWTYSVFIDTLCK 506
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++ + ++G + + Y ++ + GK+D+ LL+ M P+ T
Sbjct: 507 SKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSST 566
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ + K K L+++ +M ++G P+V +T L++ + R G+ D F++M
Sbjct: 567 YNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMV 626
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PDV YT I +Y +G +++A+ + MI G +P+ TY +I + G
Sbjct: 627 SFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAY 686
Query: 238 EACTMMKEMESRGCNPNFLVYNTLV 262
+A ++K M GC+P+ ++N L+
Sbjct: 687 DAFNVLKRMLDAGCDPSHPIWNNLI 711
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ M ++G + ++Y ++ G++D+ L +M P TY +++H L
Sbjct: 271 VFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALF 330
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
D+ L ++L N M+E +P+V +T ++D + + LD + +EM KG +P VV
Sbjct: 331 GNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVV 390
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y G +E A ++ M + PN TYN +I GF +A T++ +M
Sbjct: 391 TYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM 450
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YN+L+ AG A++++ + E G
Sbjct: 451 LESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENG 489
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 131/281 (46%), Gaps = 35/281 (12%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN +L L ++ VY +M ++ P+I T N ++ A ++G + + + + ++
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
++G SPD TY L+ + + +A + N M G + + +TT++ GL AG +
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300
Query: 167 DA------------C-----------------------KYFFDEMANKGCMPDVVCYTVM 191
D C F+EM + C P+V YTVM
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + +L++++ + + M+ KG +P+V TYN++IRG+C G+ + A ++ MES C
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN YN L+ + +A ++ M+E LV+
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVT 461
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 102/226 (45%), Gaps = 3/226 (1%)
Query: 63 LIEWVYQQMSDEG---YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
L++++ Q D+ + + +YN ++ R +D+ R+ EM P+ +T N
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ K + A ++ + + G P +T+L+ G R ++++ F+ M NK
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNK 278
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC + V YT +I AG +++ LF M P V TY +I + E
Sbjct: 279 GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEG 338
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EM R C PN Y +V + KL E+ ++ M+EKG
Sbjct: 339 MDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKG 384
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
++ F SV + L+ L+R +D K + EM N +P++ M+ +Y G +
Sbjct: 172 DIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIV 231
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A + G P+ FTY S+I G+C + A + M ++GC N + Y T++
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKY 287
L AG++ E + + M E Y
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCY 316
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GE+ R + F + K F P SY ++H L+ ++ M ++G D
Sbjct: 563 GEIEKGRAL---FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDT 619
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
YN V+ + GK+++ ++LL+EM G P TY ++ L K D+ A L
Sbjct: 620 RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
K G + +V+ +++L+DG + G +D +E+ KG P+V + ++ + + A E
Sbjct: 680 AKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A F M PN TY+ +I G C KF++A +EM+ +G PN Y T
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++S L AG + EA + EKG
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKG 824
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM D P+ + Y ++ ++ G+ + H++ +EM R G SPD N + +
Sbjct: 501 LYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVF 560
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L +K +GF P +T L+ GL +AG F M +GC+ D
Sbjct: 561 KAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTR 620
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + +G++ KA L + M TKG P V TY S+I G + DEA + +E
Sbjct: 621 AYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 680
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S+G N ++Y++L+ G++ EA+ ++ +++KG
Sbjct: 681 KSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 125/272 (45%), Gaps = 35/272 (12%)
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+ +YN++L + R++ +E + ++MS G+ P T ++ + + KL + +
Sbjct: 130 REAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQ 189
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
M + F P F Y L+ L L L M+E+G+ +V FTTL+ +R G
Sbjct: 190 TMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREG 249
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE------------------------ 200
+DA DEM + PDVV Y V I + AG+
Sbjct: 250 RVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYT 309
Query: 201 -----------LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
L +A +LF+ M Q+P + YN+MI G+ MAGKF++A ++++ +
Sbjct: 310 SMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRK 369
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GC P+ + YN ++S L G++ EA + M
Sbjct: 370 GCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 106/208 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y +M G +PD+L N M ++ G++++ L E+ GF PD +Y IL+H L
Sbjct: 536 IYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLV 595
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A L MKE G + T++DG ++G ++ +EM KG P VV
Sbjct: 596 KAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVV 655
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I L++A LF+ +KG NV Y+S+I GF G+ DEA +M+E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+G PN +N L+ L A +++EA
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEA 743
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 8/281 (2%)
Query: 19 TCGEVGLA----RKVVERFI---KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TC E+ L+ RK+ E F + FRP ++Y ++ AL R + ++QQM
Sbjct: 167 TCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQM 226
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ GYA ++ + ++ R G++D LLDEM + PD YN+ + GK K
Sbjct: 227 QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKV 286
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + MK G + +T+++ L +A L+ F+ M +P Y M
Sbjct: 287 DMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTM 346
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I Y AG+ E A L + KG +P+V +YN ++ G+ DEA +EM+ +
Sbjct: 347 IMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK-KDA 405
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN YN ++ L AGKL A V M + G + ++++
Sbjct: 406 IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVIT 446
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 147/294 (50%), Gaps = 7/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++ P + T+NI+I C G++ A V + + LF P + N ++ L
Sbjct: 401 MKKDAIPNLS-TYNIMIDMLCKAGKLETALVVRDAMKDAGLF---PNVITVNIMVDRLCK 456
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +++ + + PD +TY ++ R G++D+ ++L ++M + P+
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K + + N M +G P +L T MD + +AG ++ + F E+
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G +PD YT++I + AG +A +LF M +G + + YN++I GFC +GK +
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+A +++EM+++G P + Y +++ L +L EA+ + KG +++V
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVV 690
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 144/292 (49%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G R +N +I C G+V A +++E +K+K P +Y +++ L
Sbjct: 610 MKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE-MKTK--GHEPTVVTYGSVIDGLAK 666
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ +G +++ Y+ ++ ++G++D+ + +++E+ + G +P+ +T
Sbjct: 667 IDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 726
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL MK++ P+ + ++ L+ GL + + F+ EM
Sbjct: 727 WNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQ 786
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+V YT MI+ AG + +A LF+ KG + + YN++I G A +
Sbjct: 787 KQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRAS 846
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+A + +E +GC+ L+ +L A + +A V + E K H
Sbjct: 847 DAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLRETAKAQH 898
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++N ++ G G + +++F + K + P ++YN ++ L + + V M
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKK-DAIPNLSTYNIMIDMLCKAGKLETALVVRDAM 435
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
D G P+++T NI++ + +LD + + + PD TY L+ LG+ +
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L M + P+ + +T+L+ + G + ++EM GC PD++
Sbjct: 496 DEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTY 555
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ AGE+EK + LF + G +P+ +Y +I G AG EA + M+ +GC
Sbjct: 556 MDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGC 615
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ YNT++ +GK+ +A++++ M KG
Sbjct: 616 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ + T + L+ C + A +V++ ++ +RP ++ ++H L
Sbjct: 71 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE---MGYRPDTITFTTLIHGLFL 127
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G P+++TY +V+ + G +D LL++M + D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ L K ALNL M+ G P+V+ +++L+ L G +M
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K P++V + +I +++ G+ +A+ L D MI + P++FTYNS+I GFCM + D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M + M S+ C P+ YNTL+ + ++ + E+ R M +G
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++ LI C+ G A +++ I+ K+ P ++NA++ A +
Sbjct: 211 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI---NPNLVTFNALIDAFVK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E ++ M PDI TYN ++ +LD+ ++ + M PD T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + L M G + +TTL+ GL G+ D + F +M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD++ Y++++ G+LEKA ++FD M +++ Y +MI G C AGK D
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + +G PN + YNT++S L + L EA+ +++ M E G
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 495
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 134/253 (52%), Gaps = 2/253 (0%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RP + +N +L A+ ++++ L+ + ++M G + ++ TYNI++ R ++
Sbjct: 5 RPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLA 64
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
LL +M + G+ P T + LL+ G + A+ L++ M E+G+ P + FTTL+ G
Sbjct: 65 LALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHG 124
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
L D M +GC P++V Y V++ G+++ A +L + M +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V +N++I C D+A + KEME++G PN + Y++L+S L + G+ ++A +++
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 280 HMVEKGKYIHLVS 292
M+EK +LV+
Sbjct: 245 DMIEKKINPNLVT 257
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ +++ C G++ LA ++ + +K+ +N I+ +L
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI---EADVVIFNTIIDSLCK 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++++M +G P+++TY+ ++ G+ +LL +M +P+ T
Sbjct: 198 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ K K + A L + M + DP + + +L++G LD K F+ M
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PD+ Y +I + + +E +LF M +G + + TY ++I+G G D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G P+ + Y+ L+ L N GKL +A EV +M
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TF LI V L ++V+R + L +Y +++
Sbjct: 106 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV-------TYGVVVN 158
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + +M D++ +N ++ + + +D L EM G P
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 218
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+ L+ L + A LL+ M E +P+++ F L+D + G +
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M + PD+ Y +I + L+KA+ +F+ M++K P++ TYN++I+GFC +
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ + +EM RG + + Y TL+ L + G A +V + MV G
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN +++ Q L + +M GY P I+T + ++ ++ L+D+M
Sbjct: 47 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G+ PD T+ L+H L +K A+ L++ M + G P+++ + +++GL + G++
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D ++M DVV + +I S ++ A +LF M TKG PNV TY+S+
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C G++ +A ++ +M + NPN + +N L+ GK EA ++ M+++
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS 285
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T+N LI C + A+++ E + F P ++YN ++
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF---PDLDTYNTLIKGFCK 337
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G D +TY ++ + G D ++ +M G PD T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K AL + ++M++ + +TT+++G+ +AG +D F ++
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+VV Y MI+ + L++A L M G LP+ TYN++IR G
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517
Query: 238 EACTMMKEMES 248
+ +++EM S
Sbjct: 518 ASAELIREMRS 528
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G P T++IL+ C G++ A +V + KS++ + Y ++ +
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI---KLDIYIYTTMIEGMCK 442
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ ++ +S +G P+++TYN + +C+K RL L + + LL +M G PD
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK-RL--LQEAYALLKKMKEDGPLPD 499
Query: 115 FHTYNILLHV-LGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKY 171
TYN L+ L GDK A+ L+ M+ F D S + L+ + G LD K
Sbjct: 500 SGTYNTLIRAHLRDGDKA-ASAELIREMRSCRFVGDASTI---GLVANMLHDGRLD--KS 553
Query: 172 FFDEMA 177
F D ++
Sbjct: 554 FLDMLS 559
>gi|115458614|ref|NP_001052907.1| Os04g0446100 [Oryza sativa Japonica Group]
gi|38344550|emb|CAD40961.2| OSJNBa0027P08.18 [Oryza sativa Japonica Group]
gi|113564478|dbj|BAF14821.1| Os04g0446100 [Oryza sativa Japonica Group]
Length = 583
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 138/272 (50%), Gaps = 2/272 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-RQYKL 63
G+ AR + L+ +C L K+ F R +YN ++ +L+G R + +
Sbjct: 175 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 234
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + + D Y+PD+ ++N+V+ R+G++ + L++ M G SPD T+NIL+
Sbjct: 235 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNILVD 294
Query: 124 VLGKGDKPLAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + ++ +L ++ G P+V+ FT+++ G +AG L+ +++M G M
Sbjct: 295 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 354
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ V Y V+I Y G+L A +++ M P+V T++S+I G+C G+ D+A +
Sbjct: 355 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 414
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+M PN ++ ++ +L + EA
Sbjct: 415 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEA 446
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FN++I C G+V A ++VER + F P ++N ++ L + V
Sbjct: 253 SFNVVIKGVCRVGQVQKALELVERMNE---FGCSPDTVTHNILVDGLCRTNEVSRGHEVL 309
Query: 69 QQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++ +G P+++T+ V+ + GKL+ + ++M SG P+ TYN+L++ GK
Sbjct: 310 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 369
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+A+ + M + P V+ F++L+DG R G LD + +MA P+V
Sbjct: 370 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 429
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
++++I S ++A L + + + + P F YN +I C GK DEA + K M
Sbjct: 430 FSIIIHSLCKQNRSDEAIGLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 489
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E +GC P+ Y L+ +++EA MVE G
Sbjct: 490 EEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAG 528
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 59 RQYKLIEWVYQQMSDEGYAPD--ILTYNIVMC--------AKYRLGKLDQF--------- 99
RQ ++ Q + GY+PD L++ + C + L K +F
Sbjct: 159 RQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAY 218
Query: 100 HRLLDEMGRSG-----------------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
++L+ + G +SPD ++N+++ + + + AL L+ M
Sbjct: 219 NKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 278
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGEL 201
E G P + L+DGL R + + G CMP+VV +T +I+ Y AG+L
Sbjct: 279 EFGCSPDTVTHNILVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKL 338
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A +++ M+ G +PN TYN +I G+ G A + ++M C P+ + +++L
Sbjct: 339 EDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL 398
Query: 262 VSNLRNAGKLAEAHEVIRHMVE 283
+ G+L +A + M +
Sbjct: 399 IDGYCRCGQLDDALRIWSDMAQ 420
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 142/283 (50%), Gaps = 6/283 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++ G A T +IL+ C G+V A +V+E + + L P YN +++ +
Sbjct: 327 LKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV---PTTAIYNTLINGYCQV 383
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R + +++QM PD +TYN ++ ++ + + L+ EM +SG P T+
Sbjct: 384 RDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETF 443
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G+ + +L+ M++ G +V+ F +++ + G + D+M +
Sbjct: 444 NTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIH 503
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +P+ Y +I +YI +G E+A L + M + G ++FTYN +++G C + DE
Sbjct: 504 KDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDE 563
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A ++ + ++G P+ + YNT++S N G A E+++ M
Sbjct: 564 AEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEM 606
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 134/290 (46%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E P A ++N++I G ++ F + P + +YN ++ + +
Sbjct: 188 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLE 247
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ QM +G P+++TYN+++ R G++D+ L+DEM PD TY+IL
Sbjct: 248 AGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILF 307
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + L+L + G + L++GL + G + + + + + G +
Sbjct: 308 DGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 367
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P Y +I Y +L+ A +F+ M ++ P+ TYN++I G C EA +
Sbjct: 368 PTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDL 427
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EME G +P+ +NTL+ AG+L + V+ M +KG +++S
Sbjct: 428 VMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVIS 477
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 142/292 (48%), Gaps = 5/292 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +GF T++IL G +R ++ F +S + + +L+ L +
Sbjct: 296 MLPDGF-----TYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGK 350
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E V + + G P YN ++ ++ L + ++M PD TYN
Sbjct: 351 VAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNA 410
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K + A +L+ M++ G DPSV F TL+D RAG L+ C +M +KG
Sbjct: 411 LINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKG 470
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+V+ + ++ ++ G++ +A + D MI K +PN YNS+I + +G ++A
Sbjct: 471 IKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAF 530
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++M+S G + + YN L+ L ++ EA E+I ++ +G +VS
Sbjct: 531 LLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVS 582
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 120/245 (48%), Gaps = 2/245 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +S N +L +LL + ++ + + + G PD +N + A G LD+ +
Sbjct: 121 PSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAM 180
Query: 103 LDEMGRS--GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L MGRS PD +YN+++ L + K AL + + M + G P+ + + T++DG
Sbjct: 181 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGH 240
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G+L+A D+M G P+VV Y V+++ AG +++ + L D M + LP+
Sbjct: 241 VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
FTY+ + G G ++ E +G + L++ L GK+A+A +V+
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360
Query: 281 MVEKG 285
+V G
Sbjct: 361 LVHTG 365
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 116/277 (41%), Gaps = 12/277 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C + A +V KS P ++N ++ A Q + V
Sbjct: 407 TYNALINGLCKMEMITEAEDLVMEMEKS---GVDPSVETFNTLIDAYGRAGQLEKCFTVL 463
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M D+G +++++ V+ A + GK+ + +LD+M P+ YN ++ +
Sbjct: 464 SDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIES 523
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A L+ MK G S+ + L+ GL + +D + + N+G PDVV Y
Sbjct: 524 GGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSY 583
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I++ G+ ++A +L M P + TY+ ++ AG+ + + + M
Sbjct: 584 NTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVH 643
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ P+ +Y T N L + M EKG
Sbjct: 644 KNVEPSSSIYGTRCENESKVASLK------KEMSEKG 674
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+N LI C G+V A +++E+ + L P K SY ++HA
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLM---PNKFSYTPLIHAYCK 391
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y +M++ G+ PD++TY ++ G++D + ++M G PD
Sbjct: 392 QGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGI 451
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K K AA LL M + P + TL+DG R GNLD + F+
Sbjct: 452 YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTI 511
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P +V Y MI Y G ++ A + M + P+ FTY+++I G+ D
Sbjct: 512 EKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLD 571
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A M +EM C PN + Y +L++ G L + ++ R M G ++V+
Sbjct: 572 GAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVT 626
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 6/276 (2%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+N LI C G++ +A + FI+ KL F P +Y AI++ +K I+ +
Sbjct: 242 YNTLIDGYCKKGDMEMANGL---FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLM 298
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M+ G ++ YN ++ A+Y+ G + + ++ M G PD TYN L+ +
Sbjct: 299 EMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDG 358
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
K A LL G P+ +T L+ + G D + EM +G PD+V Y
Sbjct: 359 KVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYG 418
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ + AGE++ A + + M+ +G P+ YN ++ G C K A ++ EM +
Sbjct: 419 ALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQ 478
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ VY TLV G L EA ++ +EKG
Sbjct: 479 SVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 6/275 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ L+ GEV +A + E+ ++ +F P YN ++ L
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF---PDAGIYNILMSGLCK 461
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M D+ PD Y ++ R G LD+ +L + G +P
Sbjct: 462 KFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVG 521
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ K A+ +N MK+ P ++T++DG + +LD + F EM
Sbjct: 522 YNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMV 581
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C P+VV YT +I + G+L ++ +F M G +PNV TY+ +I FC K
Sbjct: 582 KMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLI 641
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+A + +EM C PN + +N LV+ G A
Sbjct: 642 DAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRA 676
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
KLIE + Q G P+I+ YN ++ + G ++ + L E+ GF P TY +
Sbjct: 225 KLIEDRWGQ----GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAI 280
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K A LL M G +V + T++D + G++ + M GC
Sbjct: 281 INGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGC 340
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V Y +I+ G++ +A L + + KG +PN F+Y +I +C G +D A
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ EM RG P+ + Y LV L AG++ A + M+E+G +
Sbjct: 401 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 446
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 134/290 (46%), Gaps = 7/290 (2%)
Query: 9 TARTFNILICTCGEVGLARKVVE-RFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T +I+I + GL K +E + K + + P + N++L+ L+ + + ++ +
Sbjct: 128 TREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKL 187
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYR----LGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
Y +M + A D N C + GKL++ +L+++ G P+ YN L+
Sbjct: 188 YDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLID 247
Query: 124 -VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
KGD +A L +K GF P+V + +++G + G+ A EM ++G
Sbjct: 248 GYCKKGDMEMAN-GLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLT 306
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
+V Y +I + G + KA + +GMI G P++ TYN++I G C GK EA +
Sbjct: 307 VNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQL 366
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++ +G PN Y L+ G A + M E+G LV+
Sbjct: 367 LEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVT 416
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 17/272 (6%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G + ARK+ E I+ + P YNA++ K +M APD
Sbjct: 498 GNLDEARKLFELTIEKGM---NPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDE 554
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
TY+ V+ + LD ++ EM + P+ TY L++ + +L +
Sbjct: 555 FTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFRE 614
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M+ G P+V+ ++ L+ + L FF+EM C+P+ V + ++ + G
Sbjct: 615 MQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGT 674
Query: 201 LEKAQ--------------DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
++ + F MI+ G P YNS++ C G F A + +M
Sbjct: 675 RAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKM 734
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
S+GC P+ + + L+ + G+ E ++
Sbjct: 735 TSKGCIPDSVSFVALLHGVCLEGRSKEWKNIV 766
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G P+++TY+I++ + + KL +EM + P+ T+N L++
Sbjct: 611 IFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS 670
Query: 127 K-GDKPLAA-------------LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
K G + ++ LN M G+ P + +++ L + G
Sbjct: 671 KNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQL 730
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
++M +KGC+PD V + ++ G ++ +++ + + +L Y+S++ +
Sbjct: 731 SNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLP 790
Query: 233 AGKFDEACTMMKEM 246
G EA +++ M
Sbjct: 791 QGT-SEASVILQTM 803
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 7/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T N+L+ C ++ A KV++ L P +Y IL + + + V
Sbjct: 193 TCNLLVKALCKKNDIESAYKVLDEIPSMGLV---PNLVTYTTILGGYVARGDMESAKRVL 249
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M D G+ PD TY ++M +LG+ + ++D+M ++ P+ TY +++ L K
Sbjct: 250 EEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKE 309
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A N+ + M E F P ++D L +D + +M CMPD
Sbjct: 310 KKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALL 369
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ +I G + +A+ LFD KG +P++ TYN++I G C G+ EA + +M
Sbjct: 370 STLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYE 428
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
R C PN YN L+ L G + E V+ M+E G
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIG 465
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%), Gaps = 5/244 (2%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN--IVMCAKYRL-GKLDQFHRL 102
++Y++IL L R + +E + + + Y P N I + Y L G+ + R+
Sbjct: 84 DTYHSILFKLSRARAFDPVESLMADLRN-SYPPIKCGENLFIDLLRNYGLAGRYESSMRI 142
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDK-PLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ G + N LL+VL + + L N + G P++ L+ L
Sbjct: 143 FLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALC 202
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ ++++ DE+ + G +P++V YT ++ Y+A G++E A+ + + M+ +G P+
Sbjct: 203 KKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAT 262
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY ++ G+C G+F EA T+M +ME PN + Y ++ L K EA + M
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 282 VEKG 285
+E+
Sbjct: 323 LERS 326
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVL 125
++ ++ D G + + N ++ + + D H + S G +P+ T N+L+ L
Sbjct: 142 IFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKAL 201
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + +A +L+ + +G P+++ +TT++ G G++++ K +EM ++G PD
Sbjct: 202 CKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDA 261
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
YTV++ Y G +A + D M PN TY MIR C K EA M E
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
M R P+ + ++ L K+ EA + R M++
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLK 359
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 108/249 (43%), Gaps = 10/249 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +N T+ ++I C + G AR + + ++ +F P + ++ AL
Sbjct: 287 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER---SFMPDSSLCCKVIDALCE 343
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M PD + ++ + G++ + +L DE + G P T
Sbjct: 344 DHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK-GSIPSLLT 402
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + + + A L + M E P+ + L++GLS+ GN+ +EM
Sbjct: 403 YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEML 462
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC P+ + ++ G+ E A + + G++ + ++ ++ F AG+ D
Sbjct: 463 EIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESWELFLKKF--AGELD 519
Query: 238 EACTMMKEM 246
+ +KE+
Sbjct: 520 KGVLPLKEL 528
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 7/183 (3%)
Query: 110 GFSPDFHTYNILLHVLGKGD--KPLAAL--NLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
GF+ ++ TY+ +L L + P+ +L +L N + ++ F L+ AG
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENL--FIDLLRNYGLAGR 135
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF-DGMITKGQLPNVFTYN 224
++ F + + G V ++ I + +F + + G PN+FT N
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+++ C + A ++ E+ S G PN + Y T++ G + A V+ M+++
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR 255
Query: 285 GKY 287
G Y
Sbjct: 256 GWY 258
>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
Length = 866
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 18/288 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G + T+NI++ C G+ AR+V E FI+S + + P +Y ++LHA
Sbjct: 342 MAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMS--PDVVTYTSLLHAYCS 398
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M+ +G AP+ TYN+++ + +R G+ + RLL+ M G+S D
Sbjct: 399 KGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAG 458
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
NI++ L + + A+++++ M E G L R GN D
Sbjct: 459 CNIIIDGLCRNSRLDVAMDIVDGMWEEG-----------SGALGRLGN-SFLSVVSDSSI 506
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++ C+PD + Y+++I++ G ++A+ MI K P+ Y++ I G+C GK
Sbjct: 507 SQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTS 566
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++++ME +GCNP+ YN L+ K E +++ M EKG
Sbjct: 567 LAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKG 614
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 137/311 (44%), Gaps = 32/311 (10%)
Query: 3 ENGFPTTAR-TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++G P + TF++++ C G V AR +V+ + F SYN L L+
Sbjct: 273 QHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIM---RCGGFLRRVESYNRWLSGLVRN 329
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSG-FSPDFHT 117
+ + + ++M+ EG P+ TYNI++ + GK R+ + RSG SPD T
Sbjct: 330 GRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRV-ENFIRSGVMSPDVVT 388
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y LLH AA +L+ M + G P+ + L+ L RAG + + M
Sbjct: 389 YTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMN 448
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ--------------------- 216
KG D ++I L+ A D+ DGM +G
Sbjct: 449 EKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQ 508
Query: 217 --LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
LP+ TY+ +I C G+FDEA + EM + +P+ ++Y+T + GK + A
Sbjct: 509 RCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLA 568
Query: 275 HEVIRHMVEKG 285
+V+R M +KG
Sbjct: 569 IKVLRDMEKKG 579
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 112/225 (49%), Gaps = 4/225 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG---RSGFS-PDFHTYNI 120
E + ++M +G AP+++T+N + A + G++ +R+ +M + G PD T+++
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L A L++ M+ GF V + + GL R G + + EMA++G
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ Y ++++ G+ A+ + + + + P+V TY S++ +C G A
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAAN 406
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ EM +GC PN YN L+ +L AG+ EA ++ M EKG
Sbjct: 407 RILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKG 451
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 1/206 (0%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD +TY+I++ A + G+ D+ + L EM SPD Y+ +H K K A+ +
Sbjct: 512 PDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKV 571
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M++ G +PS + L+ G + EM KG P+V+ Y +I S+
Sbjct: 572 LRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQ 631
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G + KA L D M+ +PN+ +++ +I+ +C F A M+ + R C ++
Sbjct: 632 QGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSA-QMVFDAALRTCGQKEVL 690
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVE 283
Y + + L GK EA ++ +E
Sbjct: 691 YCLMCTELTTYGKWIEAKNILEMALE 716
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 129/278 (46%), Gaps = 16/278 (5%)
Query: 15 ILICTCGEVGLARKVVERFIKSKLFNFRPFKNS--YNAILHALLGIRQYKLIEWVYQQMS 72
+ + +C +V R + F + P + YN ++ A L + L+E +Y+ +
Sbjct: 78 LALLSCSDVLPLRLAIPAFRSLRALTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLL 137
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDKP 131
G PD+ T N+++ A G+++ R+ D M R+ FS + IL + +
Sbjct: 138 LSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNEFS-----FGILARGYCRAGRS 192
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ AL +L+ M + +++ T++ G + G ++ + + M +G P+VV +
Sbjct: 193 IDALKVLDGMPSM----NLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNAR 248
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQ----LPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
I++ AG + A +F M Q P+ T++ M+ GFC AG DEA ++ M
Sbjct: 249 ISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMR 308
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G YN +S L G++ EA E++R M +G
Sbjct: 309 CGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 119/249 (47%), Gaps = 15/249 (6%)
Query: 43 PFKNSYNAILHALLGIRQY-----KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
P + +Y+ ++ AL ++ KL+E + + +S PD + Y+ + + GK
Sbjct: 512 PDQITYSILISALCKEGRFDEAKKKLLEMIVKDIS-----PDSVIYDTFIHGYCKHGKTS 566
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
++L +M + G +P TYN+L+ + K + L++ MKE G P+V+ + +L+
Sbjct: 567 LAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLI 626
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI-TKGQ 216
+ G ++ DEM +P++ + ++I +Y + AQ +FD + T GQ
Sbjct: 627 KSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQ 686
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMK-EMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
Y M GK+ EA +++ +E R +F Y ++S L G++ AH
Sbjct: 687 --KEVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSF-PYKQIISGLCEVGEVDHAH 743
Query: 276 EVIRHMVEK 284
+++ ++ K
Sbjct: 744 SLLKLLIAK 752
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 102/233 (43%), Gaps = 1/233 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++ILI + G + ++ ++ + + P Y+ +H + L V + M
Sbjct: 516 TYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM 575
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G P TYN+++ K ++ +L+ EM G SP+ TYN L+ +
Sbjct: 576 EKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMV 635
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ LL+ M + P++ F L+ + + + + FD A + C V Y +M
Sbjct: 636 NKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDA-ALRTCGQKEVLYCLM 694
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
T G+ +A+++ + + F Y +I G C G+ D A +++K
Sbjct: 695 CTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLK 747
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 127 bits (318), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 144/323 (44%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E G + T+N LI C G V A+++++ + S N P + +YN ++
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILD-LMHSNSCN--PNERTYNELICGFCR 191
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M + P ++TYN ++ + ++G LD +RLL+ M +G PD T
Sbjct: 192 KKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWT 251
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++ + L K + A L N +KE G + + +T L+DG +AG +D D M
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311
Query: 178 NKGCMPD-----------------------------------VVCYTVMITSYIAAGELE 202
+ C+P+ V YT++I + + G+ +
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A + D M++ G P+V+ Y + I FC G EA MM M RG P+ L Y ++
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
G L A +V++ M + G
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTG 454
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 37/321 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIR 59
M + G ++ LI EVG + + F K + + P +Y I+HAL R
Sbjct: 30 MPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGR 89
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + I ++ +M + G P+I TY +++ A + KL++ R+LDEM G P TYN
Sbjct: 90 RMEAIN-LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYN 148
Query: 120 ILLHVLGKGDKPLA-----------------------------------ALNLLNHMKEV 144
L+ K A A+ LL+ M E
Sbjct: 149 ALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLES 208
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
PSV+ + +L+ G + G LD+ + M G +PD Y+V I + G +E+A
Sbjct: 209 RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEA 268
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
LF+ + KG N Y ++I G+C AGK D+A +++ M + C PN YN L+
Sbjct: 269 NVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDG 328
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L K+ EA ++ M++KG
Sbjct: 329 LCKERKVQEALLLMESMIQKG 349
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 6/254 (2%)
Query: 38 LFNFRPFKN------SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKY 91
+FN P K SY ++H L + + ++++M ++ P + TY +++ A +
Sbjct: 26 VFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALF 85
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
G+ + L EM G P+ HTY ++++ + K K +L+ M E G PSV
Sbjct: 86 ESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVP 145
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ L+DG + G ++A + D M + C P+ Y +I + + +A L M
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ P+V TYNS+I G C G D A ++ M G P+ Y+ + L G++
Sbjct: 206 LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265
Query: 272 AEAHEVIRHMVEKG 285
EA+ + + EKG
Sbjct: 266 EEANVLFNSLKEKG 279
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 133/303 (43%), Gaps = 41/303 (13%)
Query: 1 MIENGFPTTARTFNILICT-CGE--VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N RT+N LIC C + V A ++ + ++S+L P +YN+++H
Sbjct: 170 MHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRL---TPSVVTYNSLIHGQCK 226
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNI---VMCAKYRL--------------------- 93
I + M++ G PD TY++ +C K R+
Sbjct: 227 IGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVI 286
Query: 94 -----------GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GK+D + LLD M P+ TYN L+ L K K AL L+ M
Sbjct: 287 YTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMI 346
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G +V +T L+ + + G+ D D+M + G PDV YT I ++ G ++
Sbjct: 347 QKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIK 406
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+D+ M +G +P+ TY +I + G + A ++K M GC+P+ Y+ L+
Sbjct: 407 EAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLI 466
Query: 263 SNL 265
+L
Sbjct: 467 KHL 469
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 35/321 (10%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G T T+ ILI G+ A +++++ + S ++P Y A +HA
Sbjct: 345 MIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS---GYQPDVYIYTAFIHAFCT 401
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K E + M + G PD LTY +V+ A LG L+ +L M +G P HT
Sbjct: 402 RGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHT 461
Query: 118 YNILLHVLGKGD-----------------------------KPLAALNLLNHMKEVGFDP 148
Y+ L+ L K + K AL L M E G P
Sbjct: 462 YSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSP 521
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ + L+ GL + G L + FD M +G P Y ++ G A L
Sbjct: 522 NINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLV 581
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ G LP + + N + G G ++A + + G N + + + L+ L
Sbjct: 582 GAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKN 641
Query: 269 GKLAEAHEVIRHMVEKGKYIH 289
G E++ M +G IH
Sbjct: 642 GLSDGCSELLGVMEARGCQIH 662
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
+A ++ N M + G + + +T L+ GL G +D F +M C P V YTV++
Sbjct: 22 SAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIV 81
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ +G +A +LF M +G PN+ TY MI C K +E ++ EM +G
Sbjct: 82 HALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLV 141
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ YN L+ G + A E++ M
Sbjct: 142 PSVPTYNALIDGYCKEGMVEAAQEILDLM 170
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 107/265 (40%), Gaps = 6/265 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G A T+ ++I G +GL + + P ++Y+ ++ LL
Sbjct: 415 MFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEEL 474
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K Y+ ++ P++ ++ +++ K + L ++M G SP+ +TY
Sbjct: 475 TK----KYKNVALCDSIPNVFFADVA--DVWKMMKFETALELFEKMLEHGCSPNINTYAK 528
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + A L +HM E G PS + +L++ G M G
Sbjct: 529 LIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHG 588
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P + V+ G EKA+ +F ++ G + + +I G G D
Sbjct: 589 HLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCS 648
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
++ ME+RGC + Y L+ L
Sbjct: 649 ELLGVMEARGCQIHPQTYRMLIEGL 673
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 191 MITSYIAAGELEKAQ---------DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
M+ Y G L +A +F+ M KG N +Y ++I G C G+ DE
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K+M C P Y +V L +G+ EA + M E+G
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERG 104
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 122/250 (48%)
Query: 35 KSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
K K +RP +Y A++ ++ + E + +M D G P ++T IV+ A R G
Sbjct: 255 KMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREG 314
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
++ R+ + M G P+ TYN ++ K A+ LL+ M+E G +P V+ +
Sbjct: 315 RMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYN 374
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
L+ G G++ + M G D Y V+I + G++++A LFDG+ +
Sbjct: 375 LLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G PN T+N++I G C AGKFD ACT ++ M S G P+ Y+ + NL E
Sbjct: 435 GIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEG 494
Query: 275 HEVIRHMVEK 284
I M++K
Sbjct: 495 LFFIDEMLQK 504
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 122/274 (44%), Gaps = 31/274 (11%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YNA++ AL + + M G+ PD T+N ++ R +L+ H L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 103 LDEMGRSGFS-------------------------------PDFHTYNILLHVLGKGDKP 131
+M GFS PD +T+ L+ L +
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHAALVKGLCDAGRG 246
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L +L MKE+G+ P+ + L+D R + + +EM + G MP VV T++
Sbjct: 247 EEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIV 306
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ +Y G + A +F+ M KG PNV+TYN++++GFC AGK +A ++ +M G
Sbjct: 307 VNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGV 366
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + YN L+ G + A ++R M G
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNG 400
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 136/317 (42%), Gaps = 35/317 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G T I++ G V F + P +YNAI+ +
Sbjct: 291 MFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGK 350
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM + G PD++TYN+++ + G + RLL M +G + D +TYN+
Sbjct: 351 VYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNV 410
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA------------ 168
L+ L K K A +L + ++ G P+ + F T+++GL +AG D
Sbjct: 411 LIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG 470
Query: 169 ---------------CK--------YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
CK +F DEM K P V YT++I A
Sbjct: 471 YAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLAT 530
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ M+++G P+V TY + +R +C G+ DEA ++ EM+ + + YNTL+
Sbjct: 531 RIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGH 590
Query: 266 RNAGKLAEAHEVIRHMV 282
+ G+ A +++HM
Sbjct: 591 TSIGQTDRAVTILKHMT 607
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 45/323 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G+ A TFN LI C ++ +A + F K F SY A++
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL---FCKMPFRGFSQDAVSYAALIEGFCE 211
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M+ PD+ T+ ++ G+ ++ +L +M G+ P
Sbjct: 212 AGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRA 267
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ + + K A +LN M + G P V+ T +++ R G + F+ M
Sbjct: 268 YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMR 327
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG-------- 229
KGC P+V Y ++ + AG++ KA L D M G P+V TYN +IRG
Sbjct: 328 FKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIG 387
Query: 230 ---------------------------FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
C GK DEAC++ +E RG PN + +NT++
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L AGK A + +M+ G
Sbjct: 448 NGLCKAGKFDVACTFLENMISAG 470
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 122/261 (46%), Gaps = 6/261 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N+LI C G +G A +++ R ++ + +YN ++ AL
Sbjct: 361 MRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLL-RLMEGN--GLAADQYTYNVLIDALCK 417
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ + G P+ +T+N V+ + GK D L+ M +G++PD +T
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYT 477
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ + L K L ++ M + PS +++T +++ L N + +M
Sbjct: 478 YSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV 537
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++GC PDVV YT + +Y G L++A+++ M + + YN++I G G+ D
Sbjct: 538 SQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTD 597
Query: 238 EACTMMKEMESRGCNPNFLVY 258
A T++K M PN +
Sbjct: 598 RAVTILKHMTGVASMPNHFTF 618
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 8/189 (4%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGFDPSVLHFTTL 156
+ H L R F F + +L H PL L L HM + P+ + L
Sbjct: 79 RLHALSPPPLRPFFDRPFRS--LLTHFSRYALTPLM-LRLFAHMYRHAPPAPTGATYNAL 135
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ L R +L + + M G PD + +I Y +LE A DLF M +G
Sbjct: 136 IRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGF 195
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
+ +Y ++I GFC AG+ DEA + +EM P+ + LV L +AG+ E
Sbjct: 196 SQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLC 251
Query: 277 VIRHMVEKG 285
+++ M E G
Sbjct: 252 MLQKMKELG 260
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 106/261 (40%), Gaps = 26/261 (9%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+ +P +Y +++ L R Y L ++ QM +G +PD++TY + A G+LD+
Sbjct: 505 DVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEA 564
Query: 100 HRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFT-- 154
++ EM + D YN L+ +G+ D+ A+ +L HM V P+ HFT
Sbjct: 565 ENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDR---AVTILKHMTGVASMPN--HFTFF 619
Query: 155 --------------TLMDGLSRAGNLDACKYF--FDEMANKGCMPDVVCYTVMITSYIAA 198
+ S ++ F F+ M Y ++ +
Sbjct: 620 ILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEE 679
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
L++ L M + N YN+++ FC + +A ++ M G PN + Y
Sbjct: 680 RRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFY 739
Query: 259 NTLVSNLRNAGKLAEAHEVIR 279
L+S L G+ A E+ R
Sbjct: 740 QYLLSGLTAEGQADRAKEIFR 760
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P Y +I + +L AQ M+ G P+ FT+NS+I G+C + + A +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+M RG + + + Y L+ AG++ EA E+ R M + Y H
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTH 233
>gi|218196531|gb|EEC78958.1| hypothetical protein OsI_19424 [Oryza sativa Indica Group]
Length = 975
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 143/329 (43%), Gaps = 58/329 (17%)
Query: 3 ENGFPTTARTFNILICTCGEV-------GLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
E+ P + +FNI++C +V L + ++ K K+ F N ++H L
Sbjct: 434 EDAKPNS-DSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMF-------NDLIHEL 485
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCA-KYRLGKLDQFHRLLDEMGRSGF 111
+ + + ++ QM D G P TYN + +C KY LD LL EM +G
Sbjct: 486 CNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALD----LLREMQTNGH 541
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD---- 167
P ++ L + A+ L+ M ++GF P ++ ++ M+G+ G +D
Sbjct: 542 PPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALH 601
Query: 168 -----ACKYFF--------------------------DEMANKGCMPDVVCYTVMITSYI 196
+CKY+ +EM KG P VV Y +MI
Sbjct: 602 LFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCC 661
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G +EKA D M+ + + P V TY S+I GFC AG+ DEA + EM +GC PN +
Sbjct: 662 KTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNI 721
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y ++ LR G++ A MV KG
Sbjct: 722 AYTAFINGLRKCGRIETALTYFEEMVTKG 750
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 126/251 (50%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +S+N ++ L +++ + + + M G IL +N ++ + +L++ +
Sbjct: 437 KPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYG 496
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ ++M G +P TYN L + + + P AAL+LL M+ G P + + T ++ L
Sbjct: 497 IFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQQLC 556
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+G + F D M G +PD+V Y+ + GE++ A LF + K LP+V
Sbjct: 557 FSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVV 616
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+N +I GF + K DEA +M+EM +G P+ + YN ++ G++ +A + M
Sbjct: 617 AHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKM 676
Query: 282 VEKGKYIHLVS 292
V + K +++
Sbjct: 677 VYEEKQPTVIT 687
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
E P+ ++NIV+C ++ KLD L +M G +N L+H L D+
Sbjct: 434 EDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEE 493
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
+ N MK++G PS + +L G+ R A EM G P + T M+
Sbjct: 494 GYGIFNQMKDLGLTPSEFTYNSLFYGICRRKYPKAALDLLREMQTNGHPPWIKNCTEMVQ 553
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+G + +A DGM+ G LP++ TY++ + G C G+ D+A + +++ + P
Sbjct: 554 QLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLP 613
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + +N L++ R + KL EA +++ M+EKG + +V+
Sbjct: 614 DVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVT 652
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 15/277 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG P + ++ C G V A + ++ ++ F P +Y+A ++ +
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQ---IGFLPDIVTYSAAMNGMCN 592
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++ +S + Y PD++ +NI++ + KLD+ ++++EM G P T
Sbjct: 593 TGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVT 652
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+++ V K + A++ L+ M P+V+ +T+L+DG AG D + EM
Sbjct: 653 YNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMR 712
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+ + YT I G +E A F+ M+TKG + F+ I G
Sbjct: 713 EKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGHPM 772
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ C ++KE+ L +T +NL+ G + EA
Sbjct: 773 KGCELLKEV---------LQKDTYGNNLKMVGLINEA 800
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 103/213 (48%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G+ PDI+TY+ M G++D L ++ + PD +NIL++ K K A
Sbjct: 575 GFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEA 634
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
++ M E G PSV+ + ++D + G ++ + D+M + P V+ YT +I
Sbjct: 635 QKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDG 694
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
+ +AG ++A L+ M KG PN Y + I G G+ + A T +EM ++G +
Sbjct: 695 FCSAGRPDEAIKLWCEMREKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELD 754
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
++ L + G + E+++ +++K Y
Sbjct: 755 TFSLLYFINFLISNGHPMKGCELLKEVLQKDTY 787
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 17/291 (5%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGI-----RQYK 62
T L+ G GL V F ++ F P +YN +L AL Q +
Sbjct: 137 TPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQAR 196
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L E V + +G +++ C G+ D + + M G+ D H L+
Sbjct: 197 LREMVAR--CGDGSVDKYTLTSLLRC-YCNAGRPDDANDVFQRMSELGWV-DEHVLTTLM 252
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K A+ LL M+ +G S + L+ G ++ G +D F +M + G +
Sbjct: 253 VAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFV 312
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
D+ Y+V+I ++ +A LF M + G P+V +I FC G F
Sbjct: 313 VDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPF 372
Query: 243 MKE----MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+ E ++S P +YN ++ L + G++ A++++R MV G+ ++
Sbjct: 373 INENAEYLKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVN 420
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 143/295 (48%), Gaps = 7/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G R FN+L+ GE+ ARKV + +S +P ++N ++ +
Sbjct: 177 LLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS----VQPTVVTFNTLISGMCR 232
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++ +Y++MSD G PD+ TY ++ R G+++ ++ +EM +G +P+
Sbjct: 233 ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVV 292
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K A ++L M+ G P ++ + L++GL RA NL A + +EM
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G PD V YT +I G+L+ A D+ M K + TY ++I G AG+
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPV 412
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +++EM P+ Y ++ G + ++++ M KGK +V+
Sbjct: 413 DAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVT 467
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y Q+ D G AP+ +N++M RLG+L ++ DEM RS P T+N L+ + +
Sbjct: 174 YLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-VQPTVVTFNTLISGMCR 232
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A L M +VG P V + L+ G R G ++ F+EM + G P+ V
Sbjct: 233 ARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVV 292
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+T +I ++ G + DL+ M +G +P++ YN+++ G C A A ++++EM+
Sbjct: 293 FTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMK 352
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ G P+ + Y TL+ GKL A ++ + M EK Y L+S + R
Sbjct: 353 NAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGR 410
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 5/266 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G A F LI + G ++ + ++ P +YNA+++ L R
Sbjct: 281 MRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARN 340
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K E + ++M + G PD +TY ++ + GKLD + +M S D TY
Sbjct: 341 LKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTA 400
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K +P+ A +L M E +P +T ++D R G++ EM NKG
Sbjct: 401 LISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKG 460
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P VV Y V++ G+++ A L M+ G P+ TYN ++ G C GK +
Sbjct: 461 KKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANS- 519
Query: 241 TMMKEME-SRGCNPNFLVYNTLVSNL 265
+E+E S+G P+F VY +L+S L
Sbjct: 520 ---EELESSKGMVPDFAVYTSLISEL 542
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+SR + F+ ++ + G P+ + V++ ++ GEL A+ +FD M Q P
Sbjct: 161 MSRLPSTPEAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQ-PT 219
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V T+N++I G C A D + KEM G P+ Y L+ G++ A ++
Sbjct: 220 VVTFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFN 279
Query: 280 HMVEKG 285
M + G
Sbjct: 280 EMRDTG 285
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 134/266 (50%), Gaps = 4/266 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G++ A K +ER ++ +P +YN+++ + + + + + +G PD
Sbjct: 284 GKLEKALKFLERM---QVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 340
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
++Y VM + K+++ L+++M S PD TYN L+H+L K AL L
Sbjct: 341 VSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLK 400
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
++ GF + ++ ++ + G +D K +M ++GC PDVV YT ++ + G
Sbjct: 401 EAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLG 460
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+++A+ + M G PN +Y +++ G C +GK EA M+ E PN + Y
Sbjct: 461 RIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYG 520
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ LR GKL+EA ++ R MVEKG
Sbjct: 521 AVMHGLRREGKLSEACDLTREMVEKG 546
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 140/294 (47%), Gaps = 6/294 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI + G A + +++ F K Y+AI+H+ + + + M
Sbjct: 378 TYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDM 437
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PD++TY ++ RLG++D+ ++L +M + G P+ +Y LL+ L K
Sbjct: 438 YSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKS 497
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L A ++N +E + P+ + + +M GL R G L EM KG P V ++
Sbjct: 498 LEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLL 557
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I S ++ +A+ + + KG NV + ++I GFC G + A +++ +M G
Sbjct: 558 IQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGK 617
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+P+ + Y L L G+L EA E+I M+ KG Y ++ ++ ++ R
Sbjct: 618 HPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGR 671
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 1/251 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMS-DEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P K SY ++ L ++ + ++ + ++M + PD +TYN ++ + G D
Sbjct: 338 PDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALA 397
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L E GF D Y+ ++H + + A +L+ M G +P V+ +T ++DG
Sbjct: 398 FLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFC 457
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G +D K +M GC P+ V YT ++ +G+ +A+++ + PN
Sbjct: 458 RLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI 517
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +++ G GK EAC + +EM +G P + N L+ +L K+ EA + +
Sbjct: 518 TYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC 577
Query: 282 VEKGKYIHLVS 292
+ KG I++V+
Sbjct: 578 LNKGCAINVVN 588
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G P + N + + GKL++ + L+ M +G PD TYN L+ ++
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNR 320
Query: 131 PLAALNLLNHMKEVG------------------------------------FDPSVLHFT 154
AL L+ + G P + +
Sbjct: 321 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYN 380
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
TL+ LS+ G+ D F E +KG D V Y+ ++ S+ G +++A+ L M ++
Sbjct: 381 TLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 440
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+V TY +++ GFC G+ DEA ++++M GC PN + Y L++ L ++GK EA
Sbjct: 441 GCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 500
Query: 275 HEVI 278
E+I
Sbjct: 501 REMI 504
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 36/255 (14%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + M+ G + VM + R GKL R+L M ++G P N ++VL
Sbjct: 222 VLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLV 281
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
KG K AL L M+ G P ++ + +L+ G ++ + +KGC PD V
Sbjct: 282 KGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKV 341
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMI------------------ 227
Y ++ ++E+ + L + M+ L P+ TYN++I
Sbjct: 342 SYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKE 401
Query: 228 -----------------RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
FC G+ DEA +++ +M SRGCNP+ + Y +V G+
Sbjct: 402 AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGR 461
Query: 271 LAEAHEVIRHMVEKG 285
+ EA ++++ M + G
Sbjct: 462 IDEAKKILQQMYKHG 476
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 1/192 (0%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
R+L M R G + ++ + K AL +L M++ G +PS+ T + L
Sbjct: 221 RVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVL 280
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G L+ F + M G PD+V Y +I Y +E A +L G+ +KG P+
Sbjct: 281 VKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 340
Query: 221 FTYNSMIRGFCMAGKFDEA-CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+Y +++ C K +E C M K + + P+ + YNTL+ L G +A ++
Sbjct: 341 VSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLK 400
Query: 280 HMVEKGKYIHLV 291
+KG +I V
Sbjct: 401 EAQDKGFHIDKV 412
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%)
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y +L VL K A +L M G + F +M SRAG L M
Sbjct: 202 VYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLM 261
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P + I + G+LEKA + M G P++ TYNS+I+G+C +
Sbjct: 262 QKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRI 321
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
++A ++ + S+GC P+ + Y T++ L K+ E ++ MV I
Sbjct: 322 EDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLI 373
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 112/261 (42%), Gaps = 9/261 (3%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L R++VE+ F P N ++ +L ++ + ++ ++G A +++ +
Sbjct: 538 LTREMVEK-------GFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFT 590
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
V+ ++G ++ +LD+M SG PD TY L LGK + A L+ M
Sbjct: 591 TVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSK 650
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G DP+ + + +++ S+ G +D ++M + P Y +I G LE+A
Sbjct: 651 GLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEA 708
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ L ++ + T + ++ + G A + M R P+ + +
Sbjct: 709 EKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVSKK 768
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L GKL EA ++ VE+G
Sbjct: 769 LVLDGKLVEADNLMLRFVERG 789
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 8/282 (2%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
++ R F+ L T + R + F++ K + F P S NA L +LL + + +
Sbjct: 144 SSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAF 203
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y++M +P++ T N+VM A + GKL++ ++ +EM G SP+ +YN L ++G
Sbjct: 204 YKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTL--IMGY 261
Query: 128 GDKPL--AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K L +A+ L N M+ G + +V+ F +L+DG + G L F EM P+
Sbjct: 262 CRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNT 321
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ Y +I + G E + L++ M G ++ TYN++I G C GK +A M+KE
Sbjct: 322 ITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKE 381
Query: 246 MESRGCNPNFLVYNTLVSN--LRNAGKLAEAHEVIRHMVEKG 285
++ PN ++ L+S +RN A ++ + MV G
Sbjct: 382 LDKENLVPNASTFSALISGQCIRNNSD--RAFQLYKSMVRIG 421
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 31 ERFIKSKLFNFRPFKNS---YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
++ ++ L+++R +S ++++ L +++++ + QM G+ P + + N +
Sbjct: 129 DKLFEAILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYL 188
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
+ L ++D EM R SP+ +T N+++ K K A+ + M+ VG
Sbjct: 189 SSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGIS 248
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P+ + TL+ G R G L++ + M KG +VV + +I + G+L +A +
Sbjct: 249 PNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKV 308
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F M PN TYN++I G G + + +EM G + L YN L+ L
Sbjct: 309 FSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCK 368
Query: 268 AGKLAEAHEVIRHM 281
GK +A +++ +
Sbjct: 369 EGKTKKAAYMVKEL 382
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 18/257 (7%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYA--PDIL----TYNIVMCAKY--------- 91
+++ ILH L R++K E + + + +G+ PD L Y+ MC
Sbjct: 95 THSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVFDSLFK 154
Query: 92 RLGKLDQFHRLLD---EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDP 148
L + +F D +M GF P + N L L + AL M+ P
Sbjct: 155 TLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISP 214
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
+V +M ++G L+ F+EM + G P+ Y +I Y G L A L
Sbjct: 215 NVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLK 274
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
+ M KG NV T+NS+I GFC GK EA + EM+ PN + YNTL++
Sbjct: 275 NSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQM 334
Query: 269 GKLAEAHEVIRHMVEKG 285
G + M G
Sbjct: 335 GNSEMGRRLYEEMSRNG 351
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ +M AP+ +TYN ++ ++G + RL +EM R+G D TYN L+ L
Sbjct: 308 VFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLC 367
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A ++ + + P+ F+ L+ G N D + M GC P+
Sbjct: 368 KEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQ 427
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ ++++++ + E A + M + P + + G C GK A + E+
Sbjct: 428 TFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSEL 487
Query: 247 ESR 249
++R
Sbjct: 488 KAR 490
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 18/199 (9%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF------------------DPSVLHF 153
S T++++LH+L K K +A +L + GF D S F
Sbjct: 90 SHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVF 149
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+L L+ F +M G +P V ++S + ++ A + M
Sbjct: 150 DSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRR 209
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
PNV+T N ++R FC +GK ++A + +EMES G +PN YNTL+ G L
Sbjct: 210 CRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNS 269
Query: 274 AHEVIRHMVEKGKYIHLVS 292
A ++ M KG ++V+
Sbjct: 270 AVKLKNSMRAKGVEANVVT 288
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G+ + T + L+ C + A +V++ ++ +RP ++ ++H L
Sbjct: 70 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE---MGYRPDTITFTTLIHGLFL 126
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G P+++TY +V+ + G +D LL++M + D
Sbjct: 127 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 186
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N ++ L K ALNL M+ G P+V+ +++L+ L G +M
Sbjct: 187 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 246
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K P++V + +I +++ G+ +A+ L D MI + P++FTYNS+I GFCM + D
Sbjct: 247 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 306
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M + M S+ C P+ YNTL+ + ++ + E+ R M +G
Sbjct: 307 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T++ LI C+ G A +++ I+ K+ P ++NA++ A +
Sbjct: 210 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI---NPNLVTFNALIDAFVK 266
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ E ++ M PDI TYN ++ +LD+ ++ + M PD T
Sbjct: 267 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 326
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K + L M G + +TTL+ GL G+ D + F +M
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G PD++ Y++++ G+LEKA ++FD M +++ Y +MI G C AGK D
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + + +G PN + YNT++S L + L EA+ +++ M E G
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 137/284 (48%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ +++ C G++ LA ++ + +K+ +N I+ +L
Sbjct: 140 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI---EADVVIFNTIIDSLCK 196
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R ++++M +G P+++TY+ ++ G+ +LL +M +P+ T
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ K K + A L + M + DP + + +L++G LD K F+ M
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+K C PD+ Y +I + + +E +LF M +G + + TY ++I+G G D
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
A + K+M S G P+ + Y+ L+ L N GKL +A EV +M
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 420
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI-------CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G+ TF LI V L ++V+R + L +Y +++
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV-------TYGVVVN 157
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L + +M D++ +N ++ + + +D L EM G P
Sbjct: 158 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 217
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ TY+ L+ L + A LL+ M E +P+++ F L+D + G +
Sbjct: 218 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 277
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D+M + PD+ Y +I + L+KA+ +F+ M++K P++ TYN++I+GFC +
Sbjct: 278 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 337
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++ + +EM RG + + Y TL+ L + G A +V + MV G
Sbjct: 338 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 389
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 113/217 (52%), Gaps = 2/217 (0%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRL--LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
P I +N ++ A ++ K D L L +M + G+ P T + LL+ G + A+
Sbjct: 40 PSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 99
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L++ M E+G+ P + FTTL+ GL D M +GC P++V Y V++
Sbjct: 100 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 159
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G+++ A +L + M +V +N++I C D+A + KEME++G PN
Sbjct: 160 CKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 219
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ Y++L+S L + G+ ++A +++ M+EK +LV+
Sbjct: 220 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 6/251 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ T+N LI C + A+++ E + F P ++YN ++
Sbjct: 280 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF---PDLDTYNTLIKGFCK 336
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + ++++MS G D +TY ++ + G D ++ +M G PD T
Sbjct: 337 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 396
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ILL L K AL + ++M++ + +TT+++G+ +AG +D F ++
Sbjct: 397 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 456
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+VV Y MI+ + L++A L M G LP+ TYN++IR G
Sbjct: 457 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 516
Query: 238 EACTMMKEMES 248
+ +++EM S
Sbjct: 517 ASAELIREMRS 527
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 89/186 (47%), Gaps = 21/186 (11%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G P T++IL+ C G++ A +V + KS++ + Y ++ +
Sbjct: 385 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI---KLDIYIYTTMIEGMCK 441
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ ++ +S +G P+++TYN + +C+K RL L + + LL +M G PD
Sbjct: 442 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK-RL--LQEAYALLKKMKEDGPLPD 498
Query: 115 FHTYNILLHV-LGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKY 171
TYN L+ L GDK A+ L+ M+ F D S + L+ + G LD K
Sbjct: 499 SGTYNTLIRAHLRDGDKA-ASAELIREMRSCRFVGDASTI---GLVANMLHDGRLD--KS 552
Query: 172 FFDEMA 177
F D ++
Sbjct: 553 FLDMLS 558
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 135/281 (48%), Gaps = 3/281 (1%)
Query: 12 TFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
T+N+L+ CGE G +E +P +YN +L L ++ + + +
Sbjct: 239 TYNVLMDGMCGE-GDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTE 297
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M E P+ T+N+V+ + R G L Q +LL++M + G + + TYN +++ L +
Sbjct: 298 MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN 357
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A+ LL+ MK G P ++ + TL+ GL A + D M GC+PD V +
Sbjct: 358 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I G + A ++F M KG PN TY+++I G A K D+A + EM +G
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
NP+ +Y L L + + EA + +R + + G H V
Sbjct: 478 FNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTV 517
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 137/304 (45%), Gaps = 43/304 (14%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G +G AR+VV +P +YN ++H L Q + V M G A
Sbjct: 146 CRAGRLGDARRVVGGM------PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCA 199
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VLGKGDKPLAALN 136
PD++TYNI++ A + Q L+D M G +P+ TYN+L+ + G+GD AL
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVD-DALE 258
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLS----------------------------------- 161
LL ++ G PS +++ T++ GL
Sbjct: 259 LLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLC 318
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G L ++M+ GC ++V Y +I ++ A L M + G P++
Sbjct: 319 RKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIV 378
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TYN++++G C A ++ +A +M M GC P+ + +NTL+ L G + +A EV + M
Sbjct: 379 TYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQM 438
Query: 282 VEKG 285
+KG
Sbjct: 439 PDKG 442
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 136/293 (46%), Gaps = 1/293 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P TFN++I + GL ++ ++ K +YNAI++ L R
Sbjct: 298 MLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRN 357
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M G PDI+TYN ++ + L+D M ++G PD T+N
Sbjct: 358 VDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNT 417
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A+ + M + G P+ + ++T++ GL++A LD F+EM +KG
Sbjct: 418 LIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKG 477
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + Y ++ +E+A + G P+ YN+++ G C GK + A
Sbjct: 478 FNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAI 536
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
+M M S GC P+ L Y L+ L G L EA E++ + + ++ + K
Sbjct: 537 DIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIK 589
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 3/218 (1%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G A ++ Y + R G+L R++ M P+ +TYN L+H L + + A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDA 186
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L++L+ M G P V+ + L++ + D M +GC P+ V Y V++
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
G+++ A +L + + G P+ YN++++G C A ++ +A ++ EM C PN
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+N ++ +L G L +A +++ M + G ++V+
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 344
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 143/322 (44%), Gaps = 41/322 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G T+N+ I C GE+ A ++V I+ +P +YN +++ L
Sbjct: 242 VIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQ---GPKPDVITYNNLIYGLCK 298
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E +M +EG PD TYN ++ + G + R++ + +GF PD T
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 118 YNILL-----------------HVLGKGDKP------------------LAALNLLNHMK 142
Y L+ LGKG KP L A L N M
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G P V F L++GL + G + M +KG PD+ + ++I Y ++E
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A ++ D M+ G P+V+TYNS++ G C KF++ K M +GC PN +N L+
Sbjct: 479 NALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 263 SNLRNAGKLAEAHEVIRHMVEK 284
+L KL EA ++ M K
Sbjct: 539 ESLCRYRKLDEALGLLEEMKNK 560
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 8/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALL 56
M+ G + T+N LI C G V LA ER + +FN F P + +Y +++ L
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLA----ERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++ + +G P+++ YN ++ G + + +L +EM G P+
Sbjct: 368 HEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+NIL++ L K A L+ M G+ P + F L+ G S ++ D M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ G PDV Y ++ + E + + M+ KG PN+FT+N ++ C K
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
DEA +++EM+++ NP+ + + TL+ G L A+ + R M E K
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 111/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M G + + T+N ++ + G + + +LLD++ + G P+ TYN+ + L
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A+ ++ + E G P V+ + L+ GL + + + +M N+G PD
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y G ++ A+ + + G +P+ FTY S+I G C G+ + A + E
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN ++YNTL+ L N G + EA ++ M EKG
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 127/289 (43%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +TFNIL+ C G V A +V+ I F P ++N ++H
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF---PDIFTFNILIHGYST 473
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + M D G PD+ TYN ++ + K + M G +P+ T
Sbjct: 474 QLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFT 533
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NILL L + K AL LL MK +P + F TL+DG + G+LD F +M
Sbjct: 534 FNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKME 593
Query: 178 NK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
Y ++I ++ + A+ LF M+ + P+ +TY M+ GFC G
Sbjct: 594 EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNV 653
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + EM G P+ +++ L ++ EA +I MV+KG
Sbjct: 654 NLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKG 702
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 118/265 (44%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G G ++ V F + ++ P SYNAI+ L+ + VY +M D G PD+
Sbjct: 87 GRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDV 146
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
++ I M + + + RLL+ M G + Y ++ + + L
Sbjct: 147 YSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGK 206
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G + F L+ L + G++ C+ D++ +G +P++ Y + I GE
Sbjct: 207 MLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGE 266
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L+ A + +I +G P+V TYN++I G C KF EA + +M + G P+ YNT
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L++ G + A ++ V G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNG 351
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 113/242 (46%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+++N +L L K E + ++ G P++ TYN+ + + G+LD R++
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
+ G PD TYN L++ L K K A L M G +P + TL+ G + G
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ + + G +PD Y +I GE +A LF+ + KG PNV YN+
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I+G G EA + EM +G P +N LV+ L G +++A +++ M+ KG
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 286 KY 287
+
Sbjct: 457 YF 458
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 94/216 (43%), Gaps = 5/216 (2%)
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE- 143
++ C K + L+ F+ + E+G F TY ++ LG K A +L M+E
Sbjct: 13 VIKCQKDPMKALEMFNSMRKEVG---FKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
VG + M R G + F+ M C P V Y +++ + +G ++
Sbjct: 70 VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQ 129
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A ++ M +G P+V+++ ++ FC + A ++ M S+GC N + Y T+V
Sbjct: 130 AHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVG 189
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKR 299
AE +E+ M+ G + L S F + R
Sbjct: 190 GFYEENFKAEGYELFGKMLASGVSLCL-STFNKLLR 224
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 106/257 (41%), Gaps = 42/257 (16%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G+ TFNILI T ++ A ++++ + + + P +YN++L+ L
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV---DPDVYTYNSLLNGLCK 508
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD--- 114
+++ + Y+ M ++G AP++ T+NI++ + R KLD+ LL+EM +PD
Sbjct: 509 TSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568
Query: 115 ---------------------------------FHTYNILLHVLGKGDKPLAALNLLNHM 141
TYNI++H + A L M
Sbjct: 569 FGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ P + ++DG + GN++ F EM G +P + +I +
Sbjct: 629 VDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRV 688
Query: 202 EKAQDLFDGMITKGQLP 218
+A + M+ KG +P
Sbjct: 689 YEAAGIIHRMVQKGLVP 705
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 10 ARTFNILI---CTCGEVG----LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
A TF LI C G++ L RK+ E + K+ + P +YN I+HA
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY---KVSSSTP---TYNIIIHAFTEKLNVT 619
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ E ++Q+M D PD TY +++ + G ++ ++ L EM +GF P T ++
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ L D+ A +++ M + G P ++ +D A A K +++ K C+
Sbjct: 680 NCLCVEDRVYEAAGIIHRMVQKGLVPEAVNTICDVDKKEVA----APKLVLEDLLKKSCI 735
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 145/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G P T+NIL +C G G A ++++ + P +Y+ +LH+
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEK---GCAPNIVTYSTLLHSFCR 398
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + QMS +G++ + YN ++ A + GKLD+ RL+ EM G PD T
Sbjct: 399 NGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICT 458
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN +++ L D+ A ++ ++ E G + + + TL+ L +G +EM
Sbjct: 459 YNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMV 518
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
GC DVV Y +I + G ++++ L + M+TKG PN F+YN +I C AGK
Sbjct: 519 LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVR 578
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A + KEM ++G P+ + YNTL++ L G A ++ + + + +V+
Sbjct: 579 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVT 633
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 140/280 (50%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
N +I C G + E + P ++YN ++H L + + + +M
Sbjct: 319 LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEME 378
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
++G AP+I+TY+ ++ + R G D +LD+M GFS + YN +++ LGK K
Sbjct: 379 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLD 438
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A+ L+ MK G P + + T++ L +D ++ F + +G + + + Y +I
Sbjct: 439 EAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLI 498
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + +G ++ L + M+ G +V +YN +I+ C G D + +++EM ++G
Sbjct: 499 HALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIK 558
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN YN L++ L AGK+ +A E+ + M+ +G +V+
Sbjct: 559 PNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVT 598
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 144/302 (47%), Gaps = 24/302 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TFN ++ C G V A ++V+R + + P +Y +L L
Sbjct: 241 MLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMM---MHGCTPSVVTYGFLLRGLCR 297
Query: 58 IRQYKLIEWVYQQMSDEGYA-----PDI--LTYNIVMCAKYRLGKLDQFHRLLDEMGRSG 110
RQ +DE YA P++ + N V+ GKL + L + MG G
Sbjct: 298 TRQ-----------ADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKG 346
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
PD HTYNIL+H L K + +A+ +L+ M+E G P+++ ++TL+ R G D +
Sbjct: 347 CPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDAR 406
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
D+M+ KG + Y +I + G+L++A L M ++G P++ TYN++I
Sbjct: 407 AMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHL 466
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
C + DEA + + G N + YNTL+ L ++G+ E + MV G + +
Sbjct: 467 CNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDV 526
Query: 291 VS 292
VS
Sbjct: 527 VS 528
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 118/278 (42%), Gaps = 31/278 (11%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F P SYNA+L L + +Y++M + P T+ + A RLG+
Sbjct: 139 FAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARD 198
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
LL M R G PD Y ++H L A LL+ M +G V F ++
Sbjct: 199 ALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVL 258
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCY---------------------------TVM 191
GL G++ D M GC P VV Y VM
Sbjct: 259 GLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM 318
Query: 192 ITSYI----AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
+ + I A G+L +A +L++ M +KG P+V TYN ++ G C G+ A M+ EME
Sbjct: 319 LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEME 378
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC PN + Y+TL+ + G +A ++ M KG
Sbjct: 379 EKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKG 416
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 125/266 (46%), Gaps = 6/266 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T++ L+ C G AR ++++ + +K F+ YN I++AL
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQ-MSAKGFSMN--SQGYNGIIYALGK 433
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + Q+M +G PDI TYN ++ ++D+ + + G + T
Sbjct: 434 DGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGIT 493
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+H L + L L N M G V+ + L+ L + GN+D +EM
Sbjct: 494 YNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMM 553
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+ Y ++I AG++ A +L M+ +G P++ TYN++I G C G
Sbjct: 554 TKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTH 613
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVS 263
A +++++ + +P+ + YN L+S
Sbjct: 614 AALNLLEKLPNENVHPDIVTYNILIS 639
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 117/264 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M GF ++ +N +I G+ G + + + K +P +YN I++ L Q
Sbjct: 412 MSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQ 471
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E ++ + +EG + +TYN ++ A G+ + RL +EM G D +YN
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNG 531
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K ++ LL M G P+ + L++ L +AG + EM N+G
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I G A +L + + + P++ TYN +I C D+A
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAS 651
Query: 241 TMMKEMESRGCNPNFLVYNTLVSN 264
++ + S G PN + +V N
Sbjct: 652 MLLDKAVSGGIVPNERTWGMMVQN 675
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 98/184 (53%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++HALL +++ + +M G D+++YN ++ A + G +D+ LL+EM
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P+ +YN+L++ L K K AL L M G P ++ + TL++GL + G
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A +++ N+ PD+V Y ++I+ + L+ A L D ++ G +PN T+ M
Sbjct: 613 HAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMM 672
Query: 227 IRGF 230
++ F
Sbjct: 673 VQNF 676
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 1/183 (0%)
Query: 102 LLDEMGRS-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LLD+M R +P F +YN +L L + D AL L M P+ F L
Sbjct: 131 LLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARAL 190
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G MA GC+PD V Y +I + +A G + +A L D M+ G +V
Sbjct: 191 CRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADV 250
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
T+N ++ G C G EA ++ M GC P+ + Y L+ L + EA+ ++
Sbjct: 251 NTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGR 310
Query: 281 MVE 283
+ E
Sbjct: 311 VPE 313
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 119/238 (50%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+ G + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ M ++ +PD++ Y +I G+L++A L D M KG P+ FTY ++I
Sbjct: 265 LAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVG 382
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 95/182 (52%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
+E+ G+ + +NIL+H K A ++ + + + G PSV+ + TLM+G R
Sbjct: 131 EEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 190
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G+LD M G PDV Y+V+I +++ A +LFD M+ KG +PN T+
Sbjct: 191 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTF 250
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++I G C G+ D A + K M S+ P+ + YNTL+ L G L +AH +I M
Sbjct: 251 TTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSM 310
Query: 284 KG 285
KG
Sbjct: 311 KG 312
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 128/301 (42%), Gaps = 41/301 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 133 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM----------- 106
+ + M G PD+ TY++++ + K+D + L DEM
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVT 249
Query: 107 -----------GRSGFS-------------PDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
GR + PD TYN L++ L K A L++ M
Sbjct: 250 FTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMS 309
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P +TTL+DG + G+LD M D V YT +I+ G
Sbjct: 310 MKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSV 369
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A+ + M++ G P++ TY +I FC G + ++KEM+ G P+ + YN L+
Sbjct: 370 DAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLM 429
Query: 263 S 263
+
Sbjct: 430 N 430
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
E G+ S+ F LM + G++ + FD + G P VV Y ++ YI G+L+
Sbjct: 135 ECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLD 194
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M+ G P+V+TY+ +I G C K D+A + EM +G PN + + TL+
Sbjct: 195 EGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLI 254
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G++ A E+ + M+ + L++
Sbjct: 255 XGHCKNGRVDLAMEIYKXMLSQSLLPDLIT 284
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+ M + PD++TYN ++ + G L Q H L+DEM G PD TY L+
Sbjct: 269 IYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCC 328
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G + EM + G PD+
Sbjct: 329 KEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIG 388
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 389 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 59/114 (51%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F++E+ G + + +++ + G++ AQ +FD + G P+V +YN+++ G+
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L K+ +A+E+ M+ KG
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKG 242
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 146/295 (49%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ GF ++ LI C GE A +++ R + KL YN ++ +
Sbjct: 164 LVALGFHLDQVSYGTLINGLCKVGETRAALQLLRR-VDGKLVQLNAV--MYNTVIDGMSK 220
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M + +PD++TY+ ++ + +GKL L ++M PD +T
Sbjct: 221 DKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYT 280
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+NIL+ K + A N+L+ M P+V F TL+DG + + K F M
Sbjct: 281 FNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMM 340
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+VV Y ++ Y ++ KA+ +F+ M +G NV +YN MI GFC K D
Sbjct: 341 KQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVD 400
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A + EM + P+ + YN+L+ L +GK++ A +++ M ++G+ ++++
Sbjct: 401 KAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIIT 455
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 123/247 (49%), Gaps = 7/247 (2%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+A++ + + K ++ +M E PD+ T+NI++ + G+L + +LD M
Sbjct: 245 TYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMM 304
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
P+ T+N L+ K K + M + G P+V+ + +LMDG +
Sbjct: 305 MIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQV 364
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ K F+ M+ +G +V Y +MI + +++KA LF M K +P+V TYNS+
Sbjct: 365 NKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSL 424
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT----LVSNLRNAGKLAEAHE---VIR 279
I G C +GK A ++ EM RG PN + YN+ L++ L++ G H +I+
Sbjct: 425 IDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIK 484
Query: 280 HMVEKGK 286
+ + GK
Sbjct: 485 GLCQSGK 491
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 35/273 (12%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N IL +L+ + Y + + QQM EG P+ +T+NI++ +LG + +L ++
Sbjct: 71 FNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKIL 130
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG--- 164
+ G+ PD T N + + ALN + + +GF + + TL++GL + G
Sbjct: 131 KMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETR 190
Query: 165 --------------NLDACKY------------------FFDEMANKGCMPDVVCYTVMI 192
L+A Y + EM K PDVV Y+ +I
Sbjct: 191 AALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALI 250
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G+L+ A DLF+ MI + P+V+T+N ++ GFC G+ +A ++ M +
Sbjct: 251 RGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIK 310
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
PN +NTLV K+ E V M+++G
Sbjct: 311 PNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQG 343
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 123/249 (49%), Gaps = 18/249 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI TFNIL+ C G + A+ V++ + + + +P +++N ++
Sbjct: 269 MILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMM---IQDIKPNVSTFNTLVDGFCK 325
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ K + V+ M +G P+++TY +M + ++++ ++ + M + G + + H+
Sbjct: 326 DRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHS 385
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+++ K K A+ L M P V+ + +L+DGL ++G + +EM
Sbjct: 386 YNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH 445
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G P+++ Y ++ + L K +D +G PN+ T +I+G C +GK +
Sbjct: 446 DRGQPPNIITYNSILNAL-----LTKLKD-------QGIQPNMHTDTILIKGLCQSGKLE 493
Query: 238 EACTMMKEM 246
A + +++
Sbjct: 494 AARKVFEDL 502
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 74/158 (46%), Gaps = 2/158 (1%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A++L N + + F ++ L ++ + +M +G P+ V + ++I
Sbjct: 51 GAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILI 110
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G + A + ++ G P++ T N+ I+GFC+ G+ +A ++ + G +
Sbjct: 111 NCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 170
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+ + Y TL++ L G+ A +++R + GK + L
Sbjct: 171 LDQVSYGTLINGLCKVGETRAALQLLRRV--DGKLVQL 206
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 47/94 (50%)
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I++ + +++ A LF+ ++ + F +N ++ + + ++ ++ME G
Sbjct: 40 ISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGI 99
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NPNF+ +N L++ G + A V+ +++ G
Sbjct: 100 NPNFVTFNILINCFCQLGLIPFAFSVLAKILKMG 133
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 136/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI NG+ TF+ L+ + GL +E +P N+Y ++ Q
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++M +G++ + + YN ++ A + GK+ + + EM G PD T+N
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + D+ AL L M G + + F TL+ R G + ++M +G
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C D + Y +I + G +EK LF+ MI KG P++ T N +I GFC AGK A
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M++M RG +P+ + YN+L++ L G++ EA + + +G
Sbjct: 613 EFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 130/250 (52%), Gaps = 5/250 (2%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++ ++ AL + + + + M+ G P+ + Y ++ A + ++D+ +L
Sbjct: 208 PNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKL 267
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+EM G PD +T+N +++ + ++ L L++ M GF P+ + + LM GL +
Sbjct: 268 LEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCK 327
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD-LFDGMITKGQLPNVF 221
+D + ++ P+VV + ++ ++ G L +A ++D MI G +P+VF
Sbjct: 328 TCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVF 383
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+++++ G C G F A ++ +M+++GC PN Y L+ G+L EA ++R M
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443
Query: 282 VEKGKYIHLV 291
+ KG ++ V
Sbjct: 444 LTKGFSLNTV 453
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 137/316 (43%), Gaps = 38/316 (12%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG---- 57
G P TFN +I C V K+V+R I L F P +Y ++H L
Sbjct: 275 GCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMI---LKGFTPNDMTYGYLMHGLCKTCRI 331
Query: 58 -------------------------IRQYKLIE---WVYQQMSDEGYAPDILTYNIVMCA 89
+R +L E +VY +M + GY PD+ T++ ++
Sbjct: 332 DEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNG 391
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+ G L+++M G P+ +TY IL+ K + A +L M GF +
Sbjct: 392 LCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLN 451
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ + L+ L + G + F EM++KGC PD+ + +I E+E A L+
Sbjct: 452 TVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYR 511
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M+ +G + N T+N++I F G+ EA ++ +M RGC + + YN L+ L G
Sbjct: 512 DMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTG 571
Query: 270 KLAEAHEVIRHMVEKG 285
+ + + M+ KG
Sbjct: 572 AVEKGLGLFEEMIRKG 587
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+ ILI C G++ A ++ + +K F+ YNA++ AL
Sbjct: 408 MDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREML-TKGFSLNTV--GYNALISALCK 464
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ +MS +G PDI T+N ++ R+ +++ L +M G + T
Sbjct: 465 HGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVT 524
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+H + + AL L+N M G + + L+ L + G ++ F+EM
Sbjct: 525 FNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI 584
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P ++ ++I + AG++ A + MI +G P++ TYNS+I G C G+
Sbjct: 585 RKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQ 644
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +++++ G P+ + YNTL+ L G +A ++ VE G
Sbjct: 645 EALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENG 692
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 127/264 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ GF +N LI + G + ++ F + +P ++N+++ L + +
Sbjct: 443 MLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDE 502
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +Y+ M EG + +T+N ++ A R G++ + +L+++M G D TYN
Sbjct: 503 MEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNG 562
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K L L M G PS++ L++G AG + F +M ++G
Sbjct: 563 LIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRG 622
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y +I G +++A +LF+ + +G P+ TYN++I C G FD+AC
Sbjct: 623 FSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDAC 682
Query: 241 TMMKEMESRGCNPNFLVYNTLVSN 264
++ G PN + +N LV N
Sbjct: 683 FLLYRGVENGFVPNDVTWNILVYN 706
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 115/256 (44%), Gaps = 5/256 (1%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM- 106
Y ++ L +K+I+ + QM +EG + ++M R G Q RLL +M
Sbjct: 107 YYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMK 166
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P F +YN++L VL G+ P A N+ M G P+ F +M L +
Sbjct: 167 GVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEV 226
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D +M GC+P+ + Y +I + +++A L + M G P+V T+N++
Sbjct: 227 DNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTV 286
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I GFC + E ++ M +G PN + Y L+ L ++ EA ++ V
Sbjct: 287 IYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSK-VPGPN 345
Query: 287 YIH---LVSKFKRYKR 299
+H LV+ F R R
Sbjct: 346 VVHFNTLVNGFVRNGR 361
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 87/184 (47%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++HA L + + + M G D +TYN ++ A + G +++ L +EM
Sbjct: 524 TFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEM 583
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R G +P T NIL++ K AL + M GF P ++ + +L++GL + G +
Sbjct: 584 IRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRI 643
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F+++ +G PD + Y +I G + A L + G +PN T+N +
Sbjct: 644 QEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNIL 703
Query: 227 IRGF 230
+ F
Sbjct: 704 VYNF 707
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG-N 165
+ G+ F Y +L+ LG LL MKE G F +M RAG
Sbjct: 96 AQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLP 155
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
A + D C P Y V++ + A ++F M++KG PN +T+
Sbjct: 156 GQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGL 215
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ CM + D AC ++++M GC PN ++Y TL+ L ++ EA +++ M G
Sbjct: 216 VMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMG 275
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 110/265 (41%), Gaps = 15/265 (5%)
Query: 31 ERFIKSKLFNFRPFKNSYNAI----LHALLGI-----RQYKLIEWVYQQMSDEGYAPDIL 81
ER +K F+ + + S+N I L LL + ++ +W Q +GY
Sbjct: 51 ERLLKP--FDLKELRRSFNKITPFQLCKLLELPLDVETSMEIFKWAGAQ---KGYCHSFS 105
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
Y +++ RLL +M G + +++ G+ P A LL M
Sbjct: 106 VYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDM 165
Query: 142 KEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
K V +PS + ++D L F +M +KG P+ + +++ + E
Sbjct: 166 KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNE 225
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
++ A L M G +PN Y ++I + DEA +++EM GC P+ +NT
Sbjct: 226 VDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNT 285
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ ++ E +++ M+ KG
Sbjct: 286 VIYGFCRLNRVLEGAKLVDRMILKG 310
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 6/130 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G + T NILI CT G+V A + + I F P +YN++++ L
Sbjct: 583 MIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHR---GFSPDIVTYNSLINGLCK 639
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +++++ EG PD +TYN ++C R G D LL +GF P+ T
Sbjct: 640 RGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVT 699
Query: 118 YNILLHVLGK 127
+NIL++ GK
Sbjct: 700 WNILVYNFGK 709
>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 500
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF + TF L+ C A +V++ + + P YN I+ +L
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG---LGYEPNVVIYNTIIDSLCE 196
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q V + M G PD++TYN ++ + G R+L +M R G SPD T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ V GK + L A N M + +P+++ + +L++GL G LD K + +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG P+ V Y +I Y A ++ + M G + FTYN++ +G+C AGKF
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A ++ M S G +P+ +N L+ L + GK+ +A
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKA 413
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+F LI C C + LA + + +K F P ++ ++++ + ++ +
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMK---LGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q+ GY P+++ YN ++ + G+++ +L M + G PD TYN L+ L
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ +L+ M +G P V+ F+ L+D + G L K ++EM + P++V Y
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTY 292
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I G L++A+ + + +++KG PN TYN++I G+C A + D+ ++ M
Sbjct: 293 NSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSR 352
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + YNTL AGK + A +V+ MV G
Sbjct: 353 DGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCG 389
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 125/250 (50%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++ +L A+ + +Y+ + +++ + G + D+ ++ ++ R +L
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M + GF P T+ L++ ++ A++L++ + +G++P+V+ + T++D L
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G ++ M G PDVV Y +IT +G + + M+ G P+V T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++++I + G+ EA EM R NPN + YN+L++ L G L EA +V+ +V
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 283 EKGKYIHLVS 292
KG + + V+
Sbjct: 317 SKGFFPNAVT 326
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 135/289 (46%), Gaps = 7/289 (2%)
Query: 11 RTFNILICTCGEVGLARKVVER-----FIKSKLFNFRPF--KNSYNAILHALLGIRQYKL 63
R+ I+I + L R ++E+ + ++ N R F ++ Y L + L ++
Sbjct: 3 RSIVIVIALTAKGFLHRHLLEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFND 62
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ M++ P I+ ++ ++ A +L K + L + G S D +++ L+
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLID 122
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+ + AL+ L M ++GF+PS++ F +L++G D++ G P
Sbjct: 123 CFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEP 182
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+VV Y +I S G++ A D+ M G P+V TYNS+I +G + + ++
Sbjct: 183 NVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARIL 242
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+M G +P+ + ++ L+ G+L EA + M+++ ++V+
Sbjct: 243 SDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVT 291
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 110/247 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G TF+ LI G+ G + +++ + + P +YN++++ L
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGL 304
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V + +G+ P+ +TYN ++ + ++D ++L M R G D TYN
Sbjct: 305 LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNT 364
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L + K AA +L M G P + F L+DGL G + +++
Sbjct: 365 LYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ ++ Y ++I A ++E A LF + KG P+V TY +M+ G + EA
Sbjct: 425 TVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAH 484
Query: 241 TMMKEME 247
+ ++M+
Sbjct: 485 ELYRKMQ 491
>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
chloroplastic [Vitis vinifera]
Length = 867
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQ 60
+ G+ T F+ LI G G + ++ F K +P +YNA++ A G
Sbjct: 212 LNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVD 271
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ +M G PD +T+N ++ R G + L EM G D TYN
Sbjct: 272 FNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNT 331
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + KG + A +++ M P+V+ ++T++DG ++AG LD F+EM
Sbjct: 332 LLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFAS 391
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D V Y +++ Y G E+A ++ M + G + TYN+++ G+ GK++E
Sbjct: 392 IGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVK 451
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM++ PN L Y+TL+ G EA EV R + G
Sbjct: 452 RVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAG 496
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 14/276 (5%)
Query: 1 MIENGFPTTARTFNILICTCGEVGL---AR----KVVERFIKSKLFNFRPFKNSYNAILH 53
M+ NG TFN L+ CG GL AR +++ R I+ +F +YN +L
Sbjct: 282 MLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIF-------TYNTLLD 334
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A+ Q L + +M + P+++TY+ V+ + G+LD+ L +EM +
Sbjct: 335 AVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGL 394
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +YN LL + K + ALN+ M+ G + + L+ G + G + K F
Sbjct: 395 DRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVF 454
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+EM + P+++ Y+ +I Y G ++A ++F G +V Y+++I C
Sbjct: 455 EEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKN 514
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
G + A + + EM G PN + YN+++ +G
Sbjct: 515 GLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSG 550
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 116/238 (48%), Gaps = 1/238 (0%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
+A++ L + Q +L + V++ +EGY + ++ ++ A R G D+ ++ + M
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYGNTVYAFSALISAYGRSGYCDEAIKVFETMKS 248
Query: 109 SGFSPDFHTYNILLHVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG P+ TYN ++ GKG A + + M G P + F +L+ R G +
Sbjct: 249 SGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWE 308
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A + F EM +G D+ Y ++ + G+++ A + M K +PNV TY+++I
Sbjct: 309 AARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVI 368
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ AG+ DEA + EM+ + + YNTL+S G+ EA V + M G
Sbjct: 369 DGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSG 426
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 92/191 (48%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++ +I + G + + F + K + + SYN +L + +++ V ++M
Sbjct: 363 TYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEM 422
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G D +TYN ++ + GK ++ R+ +EM P+ TY+ L+ V KG
Sbjct: 423 ESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLY 482
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+ + K+ G V+ ++ L+D L + G +++ F DEM +G P+VV Y +
Sbjct: 483 QEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSI 542
Query: 192 ITSYIAAGELE 202
I ++ +G E
Sbjct: 543 IDAFGRSGSAE 553
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 13/272 (4%)
Query: 27 RKVVERFIKSKLFNF------RPFKNSYNAILHALLGIRQ-------YKLIEWVYQQMSD 73
RKV+E +K K F + Y A L+ + Q ++ + V ++
Sbjct: 103 RKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITK 162
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G P ++++N ++ RLG LD+ RL M SG PD +TY++L++ L K K
Sbjct: 163 WGLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDD 222
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A L + M + G P+ + FTTL+DG + G +D + +M ++ PD++ Y +I
Sbjct: 223 ANELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 282
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
GEL++A DL D M +G P+ TY ++I G C G + A K M
Sbjct: 283 GLCKKGELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRL 342
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +VY L+S L G+ +A +++R M+ G
Sbjct: 343 DDVVYTALISGLCQEGRSVDAEKMLREMLSVG 374
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 6/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V+ K + RP S+N +++ +
Sbjct: 125 ILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITK---WGLRPSVVSFNTLINGYIR 181
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 182 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGMVPNGVT 241
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G L DEM+
Sbjct: 242 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGELKQAHDLIDEMS 301
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD + YT +I G++E A + MI + + Y ++I G C G+
Sbjct: 302 MEGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRSV 361
Query: 238 EACTMMKEMESRGCNPN 254
+A M++EM S G PN
Sbjct: 362 DAEKMLREMLSVGLKPN 378
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 136/280 (48%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ +LI + G+ ++ E + K + P +YN +++ L + K
Sbjct: 228 GLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V+ +M + G + +I+TYN ++ R K ++ ++++D+M +P+ TYN L+
Sbjct: 288 FKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDG 347
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K AL+L +K G PS++ + L+ G R G+ EM +G P
Sbjct: 348 FCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPS 407
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V YT++I ++ + +E A L M G +P+V TY+ +I GFC+ G+ +EA + K
Sbjct: 408 KVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFK 467
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M + PN ++YNT++ G A + R M EK
Sbjct: 468 SMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YN ++ L + V QM P+++TYN ++ +GKL + L ++
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDL 364
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SP TYN+L+ + A ++ M+E G PS + +T L+D +R+ N+
Sbjct: 365 KSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNM 424
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ M G +PDV Y+V+I + G++ +A LF M+ K PN YN+M
Sbjct: 425 ETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTM 484
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I G+C G A + ++ME + PN Y+ L+ L KL EA +++ M++ G
Sbjct: 485 ILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSG 543
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 130/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+F I+I C E G K + ++ + F F P Y ++ + + + ++ +M
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G + TY +++ ++ G Q + ++M G P+ +TYN +++ L K +
Sbjct: 225 GKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRT 284
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + + M+E G +++ + TL+ GL R + D+M + P+++ Y +
Sbjct: 285 KDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTL 344
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + + G+L KA L + ++G P++ TYN ++ GFC G A M+KEME RG
Sbjct: 345 IDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y L+ + + A ++ M E G
Sbjct: 405 KPSKVTYTILIDTFARSDNMETAIQLRSSMEELG 438
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 126/276 (45%), Gaps = 7/276 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N LI C + A KV+++ +KS + N P +YN ++
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQ-MKSYVIN--PNLITYNTLIDGFCS 350
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + + G +P ++TYN+++ R G +++ EM G P T
Sbjct: 351 VGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y IL+ + D A+ L + M+E+G P V ++ L+ G G ++ F M
Sbjct: 411 YTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K P+ V Y MI Y G +A LF M K PNV +Y+ +IR C K
Sbjct: 471 EKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLK 530
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
EA ++++M G +P+ + N L+S + +A+
Sbjct: 531 EAEDLVEKMIDSGIDPSDTICN-LISRAKTDSPVAQ 565
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 118/252 (46%), Gaps = 1/252 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P N +N +L ++G + W + S D+ ++ IV+ G++++
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQW-WCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL E+ GFSP+ Y L+ K + A +L M + G + +T L+ GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G +++M G P++ Y ++ G + A +FD M +G N+
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN++I G C K +EA +M +M+S NPN + YNTL+ + GKL +A + R
Sbjct: 304 VTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRD 363
Query: 281 MVEKGKYIHLVS 292
+ +G LV+
Sbjct: 364 LKSRGLSPSLVT 375
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 116/234 (49%), Gaps = 1/234 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y I++A + + + + +M D+G+ P +N ++ +Q+ +E
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-S 155
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
+ D +++ I++ + + + +LL ++E GF P+V+ +TTL+DG + G ++
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
K F EM G + + YTV+I G ++ ++++ M G PN++TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
C G+ +A + EM RG + N + YNTL+ L K EA++V+ M
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 3/211 (1%)
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
Y +++ A + LD +EM GF P + +N LL + N K
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 143 -EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+V D V F ++ G AG ++ E+ G P+VV YT +I GE+
Sbjct: 157 IKVVLD--VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
EKA+DLF M G + N +TY +I G G + M ++M+ G PN YN +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCV 274
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ L G+ +A +V M E+G ++V+
Sbjct: 275 MNQLCKDGRTKDAFKVFDEMRERGVSCNIVT 305
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 136/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNI---LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G R N + GE G R + E IKS+ F P SY+ ++H L+
Sbjct: 538 MIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEE-IKSR--GFIPDVMSYSILIHGLVK 594
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ M ++G D YN + + GK+++ ++LL+EM G P T
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K D+ A L K G + +V+ +++L+DG + G +D +E+
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 714
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG P+V + ++ + + A E+ +A F M PN TY+ +I G C KF+
Sbjct: 715 QKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFN 774
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A +EM+ +G PN + Y T+++ L AG +AEA + G
Sbjct: 775 KAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANG 822
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM D P+ + Y ++ + ++ G+ + H++ EM G SPD N + +
Sbjct: 499 LYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVF 558
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L +K GF P V+ ++ L+ GL +AG F M +GC+ D
Sbjct: 559 KAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTH 618
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y I + +G++ KA L + M TKG+ P V TY S+I G + DEA + +E
Sbjct: 619 AYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 678
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S G N ++Y++L+ G++ EA+ ++ +++KG
Sbjct: 679 KSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 717
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF + +T LI +C + R+ + + F FRP ++Y ++ AL +++ ++
Sbjct: 158 GFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIM 217
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++ QM + GY + + V+ R G+LD LLDEM + D YN+ +
Sbjct: 218 LTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDC 277
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK K A + +K G P + +T+++ L + LD F++M +P
Sbjct: 278 FGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPC 337
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y MI Y +AG+ ++A L + +G +P+V YN ++ G+ EA +
Sbjct: 338 AYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFE 397
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM+ + PN YN L+ L AG++ A +V M E G + ++++
Sbjct: 398 EMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMT 444
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 116/239 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y+++L + ++ E + +MS G+ P T ++ + + KL + L+ M
Sbjct: 130 AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCM 189
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ F P F Y L+ L + L L + M+E+G++ SV FTT++ +R G L
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DA DEM + D+V Y V I + AG+++ A F + + G LP+ TY SM
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C + DEA + ++ME P YNT++ +AGK EA+ ++ +G
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG 368
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 140/283 (49%), Gaps = 6/283 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N+LI C GEV A KV + ++ LF P + N ++ L ++ ++
Sbjct: 409 TYNVLIDMLCKAGEVEAAFKVRDAMKEAGLF---PNVMTVNIMIDRLCKAKKLDEACSIF 465
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M+ + +PD +T+ ++ + G++D +RL ++M S P+ Y L+ K
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKC 525
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + M G P + MD + +AG + F+E+ ++G +PDV+ Y
Sbjct: 526 GRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSY 585
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I + AG + +LF M +G + + YN+ I GFC +GK ++A +++EM++
Sbjct: 586 SILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKT 645
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+G P + Y +++ L +L EA+ + G +++V
Sbjct: 646 KGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVV 688
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 144/297 (48%), Gaps = 6/297 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +N I C G+V A +++E +K+K +P +Y +++ L
Sbjct: 608 MKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEE-MKTK--GRQPTVVTYGSVIDGLAK 664
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ G +++ Y+ ++ ++G++D+ + +++E+ + G +P+ +T
Sbjct: 665 IDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYT 724
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL +MK + P+ + ++ L++GL R + F+ EM
Sbjct: 725 WNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQ 784
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ + YT MI AG + +A LF+ G +P+ +YN++I G + +
Sbjct: 785 KQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAM 844
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
EA + +E +GCN + L+ L+ L +A V + E K H +
Sbjct: 845 EAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKSQHAARSW 901
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 105/215 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G +PD+ N M ++ G+ + L +E+ GF PD +Y+IL+H L
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLV 593
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K L MKE G + T +DG ++G ++ +EM KG P VV
Sbjct: 594 KAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVV 653
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I L++A LF+ + G NV Y+S+I GF G+ DEA +M+E+
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+G PN +N L+ L A ++ EA ++M
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNM 748
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 132/280 (47%), Gaps = 8/280 (2%)
Query: 17 ICTC----GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
I TC G +G A + E K + P ++YN ++ L + + V M
Sbjct: 379 ILTCLGKKGRLGEALRTFEEMKK----DAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMK 434
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+ G P+++T NI++ + KLD+ + + M SPD T+ L+ LGK +
Sbjct: 435 EAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVD 494
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A L M + P+ + +T+L+ + G + F EM ++GC PD+ +
Sbjct: 495 DAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYM 554
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
AGE K + LF+ + ++G +P+V +Y+ +I G AG E + M+ +GC
Sbjct: 555 DCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCV 614
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ YNT + +GK+ +A++++ M KG+ +V+
Sbjct: 615 LDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 139/266 (52%), Gaps = 12/266 (4%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+V A+ V+ +K+ L +P +YN ++ + V+ + G PD+
Sbjct: 287 GKVKEAKNVLAVIVKTCL---KPNVITYNTLIDGY--------AKHVFNAVGLMGVTPDV 335
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+YNI++ ++ ++++ L EM + P+ TYN L+ L K + A +L++
Sbjct: 336 WSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE 395
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M + G +V+ + +L++GL + G LD ++M ++G PD+ +++ + G+
Sbjct: 396 MHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGK 455
Query: 201 -LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
L+ AQ LF ++ KG PNV+TYN +I G C G DEA + +ME GC+PN + +
Sbjct: 456 RLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFK 515
Query: 260 TLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ L G+ +A +++ M+ +G
Sbjct: 516 IIICALLEKGETDKAEKLLCEMIARG 541
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 142/287 (49%), Gaps = 12/287 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
++ GF ++ LI ++G R ++ R I +L P YN I+ L
Sbjct: 159 LLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLT--EPNVVMYNTIIDCLCKR 216
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ ++ +MS +G + +++TY+ ++ +GKL + L+EM +PD + Y
Sbjct: 217 KLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIY 276
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ L K K A N+L + + P+V+ + TL+DG + K+ F+ +
Sbjct: 277 NTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYA--------KHVFNAVGL 328
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PDV Y +MI +E+A +L+ M K +PN TYNS+I G C +G+
Sbjct: 329 MGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISY 388
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EM RG + N + YN+L++ L G+L +A +I M ++G
Sbjct: 389 AWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQG 435
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 116/237 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+N IL + ++ Y + + +++ + PD T NI++ LG+++ +L ++
Sbjct: 65 QFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKI 124
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G+ PD T L+ L + AL+ + + GF + + TL++G+ + G
Sbjct: 125 LKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGET 184
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
A + + P+VV Y +I + +A +LF M KG NV TY+++
Sbjct: 185 RAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAI 244
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
I GFC+ GK EA + EM + NP+ +YNTLV L GK+ EA V+ +V+
Sbjct: 245 IHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVK 301
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 141/311 (45%), Gaps = 33/311 (10%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T NILI C G++ LA V+ + +K + ++P + ++ L Q K +
Sbjct: 100 TLNILINCFCHLGQINLAFSVLSKILK---WGYQPDTVTLTTLIKGLCLKGQVKKALHFH 156
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++ +G+ D ++Y ++ ++G+ +LL + P+ YN ++ L K
Sbjct: 157 DKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKR 216
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A NL + M G +V+ ++ ++ G G L F +EM K PDV Y
Sbjct: 217 KLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIY 276
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF------------------ 230
++ + G++++A+++ ++ PNV TYN++I G+
Sbjct: 277 NTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVW 336
Query: 231 ---------CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
C + +EA + KEM + PN + YN+L+ L +G+++ A ++I M
Sbjct: 337 SYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEM 396
Query: 282 VEKGKYIHLVS 292
++G + ++++
Sbjct: 397 HDRGHHANVIT 407
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 106/214 (49%), Gaps = 1/214 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G ++NI+I ++ + + + + N P +YN+++ L +
Sbjct: 330 GVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH- 123
+ +M D G+ +++TYN ++ + G+LD+ L+++M G PD +T NILLH
Sbjct: 390 WDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHG 449
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
+L KG + A L + + G+ P+V + ++ G + G LD +M + GC P
Sbjct: 450 LLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSP 509
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ + + ++I + + GE +KA+ L MI +G L
Sbjct: 510 NAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 116/243 (47%), Gaps = 13/243 (5%)
Query: 23 VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
V L+R++ + I+ F + N +++ + Q L V ++ GY PD +T
Sbjct: 83 VSLSRRLELKAIQPDFF-------TLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVT 135
Query: 83 YNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+ +C K ++ K FH D++ GF D +Y L++ + K + AA+ LL
Sbjct: 136 LTTLIKGLCLKGQVKKALHFH---DKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLR 192
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
+ +P+V+ + T++D L + + F EM+ KG +VV Y+ +I + G
Sbjct: 193 RIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVG 252
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L +A + M+ K P+V+ YN+++ GK EA ++ + PN + YN
Sbjct: 253 KLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYN 312
Query: 260 TLV 262
TL+
Sbjct: 313 TLI 315
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 6/213 (2%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ P I+ +N ++ + ++ L + PDF T NIL++ + A
Sbjct: 59 HTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAF 118
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
++L+ + + G+ P + TTL+ GL G + +F D++ +G D V Y +I
Sbjct: 119 SVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGV 178
Query: 196 IAAGELEKAQDLF---DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
GE A L DG +T+ PNV YN++I C EAC + EM +G +
Sbjct: 179 CKIGETRAAIQLLRRIDGRLTE---PNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGIS 235
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N + Y+ ++ GKL EA + MV K
Sbjct: 236 ANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKA 268
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 84/195 (43%), Gaps = 4/195 (2%)
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
QFHR+L +P +N +L K ++L ++ P L+
Sbjct: 50 QFHRML----CMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILI 105
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
+ G ++ ++ G PD V T +I G+++KA D ++ +G
Sbjct: 106 NCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFR 165
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+ +Y ++I G C G+ A +++ ++ R PN ++YNT++ L ++EA +
Sbjct: 166 LDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNL 225
Query: 278 IRHMVEKGKYIHLVS 292
M KG ++V+
Sbjct: 226 FSEMSVKGISANVVT 240
Score = 38.1 bits (87), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%)
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N+D + F M P ++ + ++ S+ L + K P+ FT N
Sbjct: 43 NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+I FC G+ + A +++ ++ G P+ + TL+ L G++ +A
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKA 152
>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g18940-like [Glycine max]
Length = 829
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 141/294 (47%), Gaps = 9/294 (3%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQYKLIEWVY 68
R + ++ + G ++ ++ F K K P +YN +L + +G R + I +
Sbjct: 216 RAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMG-RSWDRILELL 274
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M +G D T + V+ A R G LD+ + L E+ +G+ P TYN +L V GK
Sbjct: 275 DEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKA 334
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
AL++L M++ P + + L RAG LD D M +KG MP+ + Y
Sbjct: 335 GIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITY 394
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I +Y AG + A LF M G PNV+TYNS++ + ++ ++ EM+
Sbjct: 395 TTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKL 454
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKR 296
GC PN +NT+++ GK ++V+R M +K + L+S + R
Sbjct: 455 NGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYAR 508
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 146/342 (42%), Gaps = 70/342 (20%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N ++ G+ V++ + KL P + ++N +L ++ + V ++M
Sbjct: 428 TYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREM 487
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G+ PD T+N ++ A R G ++ EM +SGF+P TYN LL+ L +
Sbjct: 488 KNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDW 547
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA----------------------- 168
AA +++ M+ GF P+ ++ L+ S+AGN+
Sbjct: 548 KAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTL 607
Query: 169 ------CKYF------FDEMANKGCMPDVV------------------------------ 186
C++ FD++ G PD+V
Sbjct: 608 VLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGL 667
Query: 187 -----CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
Y ++ Y+ GE KA+++ G+ G P+V +YN++I+GFC G EA
Sbjct: 668 QPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIG 727
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++ EM ++G P + YNT +S EA+EVIR M+E
Sbjct: 728 VLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIE 769
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 2/284 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIR 59
M+++GF T+N L+ G K E I+ + F+P +NSY+ +LH
Sbjct: 522 MVKSGFTPCVTTYNALLNALARRG-DWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAG 580
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
K IE V +++ D P + ++ ++ L R D++ + G+ PD N
Sbjct: 581 NVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVIN 640
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L + + A +L+ + E G P++ + LMD R G + + N
Sbjct: 641 SMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNS 700
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PDVV Y +I + G +++A + M TKG P + TYN+ + G+ FDEA
Sbjct: 701 GPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEA 760
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+++ M C P+ L Y LV AGK EA + + + E
Sbjct: 761 NEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKE 804
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 119/285 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T + +I CG G+ + + + K ++P +YN++L
Sbjct: 277 MRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGI 336
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y + ++M D PD +TYN + R G LD+ ++D M G P+ TY
Sbjct: 337 YTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTT 396
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ GK + AL L + MK++G P+V + +++ L + + EM G
Sbjct: 397 VIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNG 456
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ + M+ G+ + M G P+ T+N++I + G ++
Sbjct: 457 CAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSA 516
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M EM G P YN L++ L G A VI+ M KG
Sbjct: 517 KMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKG 561
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Query: 59 RQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R L EW + SD+ D +++ R + +L D + +S D
Sbjct: 158 RALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRA 217
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG-NLDACKYFFDEM 176
Y +LH + K A++L MKE+G DP+++ + ++D + G + D DEM
Sbjct: 218 YTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEM 277
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+KG D + +I++ G L++A+ + G P TYNSM++ F AG +
Sbjct: 278 RSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIY 337
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA +++KEME C P+ + YN L + AG L E VI M KG
Sbjct: 338 TEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKG 386
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 130/282 (46%), Gaps = 4/282 (1%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG+ T+N ++ G+ G+ + + + + N P +YN + A +R L
Sbjct: 315 NGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNEL--AATYVRAGFL 372
Query: 64 IE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
E V M+ +G P+ +TY V+ A + G+ D RL M G +P+ +TYN +
Sbjct: 373 DEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSV 432
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L +LGK + + +L MK G P+ + T++ S G + EM N G
Sbjct: 433 LAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGF 492
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD + +I++Y G + ++ M+ G P V TYN+++ G + A +
Sbjct: 493 EPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAES 552
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
++++M ++G PN Y+ L+ AG + +V + + +
Sbjct: 553 VIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYD 594
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 113/262 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +N P + T+N L T G + + P +Y ++ A +
Sbjct: 347 MEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGR 406
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M D G AP++ TYN V+ + + + ++L EM +G +P+ T+N
Sbjct: 407 EDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNT 466
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L V + K +L MK GF+P F TL+ +R G+ + EM G
Sbjct: 467 MLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSG 526
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P V Y ++ + G+ + A+ + M TKG PN +Y+ ++ + AG
Sbjct: 527 FTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIE 586
Query: 241 TMMKEMESRGCNPNFLVYNTLV 262
+ KE+ P++++ TLV
Sbjct: 587 KVEKEIYDGHVFPSWILLRTLV 608
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 133/278 (47%), Gaps = 9/278 (3%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN----SYNAILHALLGIRQYKLIEWV 67
T+N++I GLARK + R K +YN ++ LL K ++ +
Sbjct: 270 TYNVVI-----AGLARKGYLEEAAELVEEMRLSKKASSFTYNPLITGLLARGFVKKVDDL 324
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M +EG P ++TYN ++ + G+++ EM G PD TYN LL+ K
Sbjct: 325 QLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCK 384
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
AL L ++ G P+VL + L+DG R G+L+ + +EM +GC+PDV
Sbjct: 385 AGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYT 444
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT+++ L ++ FD M++KG P+ F YN+ I G ++ + + +
Sbjct: 445 YTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIM 504
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + + YN L+ L G L +A E++ M+ G
Sbjct: 505 LEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNG 542
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 139/320 (43%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T T+N +I + G +F++ + P +YN++L+
Sbjct: 328 MENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGN 387
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K ++ + G AP +LTYNI++ RLG L++ RL +EM G PD +TY I
Sbjct: 388 QKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTI 447
Query: 121 LL-----------------HVLGKGDKP--------------LAALNLLNHMKEV----G 145
L+ +L KG +P L ++ ++EV G
Sbjct: 448 LMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEG 507
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ + L+DGL + GNL + +M + G PD + YT +I ++ G L +A+
Sbjct: 508 ISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREAR 567
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
F+ MI+ G P+ TY +I +C G A ++M G PN + YN L+ L
Sbjct: 568 KFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 627
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G+ A+ M+E+G
Sbjct: 628 CRMGRTQLAYRHFYEMLERG 647
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 128/274 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI G +KV + ++ + P +YNA++H LL Q + + + +M
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PD++TYN ++ + G + L ++ R+G +P TYNIL+ +
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 423
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L M E G P V +T LM G +L + FFDEM +KG PD Y
Sbjct: 424 EEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTR 483
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + I G++ K+ L + ++ +G + TYN +I G C G +A +M +M S G
Sbjct: 484 ICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGL 543
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y L+ G L EA + M+ G
Sbjct: 544 QPDCITYTCLIHAHCERGFLREARKFFNDMISDG 577
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 116/261 (44%), Gaps = 6/261 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+NILI C G++ AR++ E ++ P +Y ++ +
Sbjct: 402 GLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCL---PDVYTYTILMKGSHNVCSL 458
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + +M +G PD YN +CA+ LG + + +L + + G S D TYNIL
Sbjct: 459 AMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNIL 518
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K A L+ M G P + +T L+ G L + FF++M + G
Sbjct: 519 IDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGL 578
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P V YTV+I +Y G L A F M+ +G PN TYN +I C G+ A
Sbjct: 579 PPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYR 638
Query: 242 MMKEMESRGCNPNFLVYNTLV 262
EM RG PN Y L+
Sbjct: 639 HFYEMLERGLVPNKYTYTLLI 659
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 116/239 (48%), Gaps = 3/239 (1%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
N +L L ++ + V+ +M G P I+TYN ++ + + G+ D+ LL EM
Sbjct: 200 NKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEA 259
Query: 109 SGFS--PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G S P+ TYN+++ L + A L+ M+ + S + L+ GL G +
Sbjct: 260 RGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMR-LSKKASSFTYNPLITGLLARGFV 318
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
EM N+G MP VV Y MI + +G++E AQ F M G LP+V TYNS+
Sbjct: 319 KKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSL 378
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G+C AG EA + ++ G P L YN L+ G L EA + MVE+G
Sbjct: 379 LNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG 437
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 161 SRAGNLDACKYF----FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+R D C F EMA+ G PDV ++ A + + M+ G
Sbjct: 168 ARDATPDTCSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGI 227
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG--CNPNFLVYNTLVSNLRNAG 269
P++ TYN+++ F G+ D+ ++KEME+RG C PN + YN +++ L G
Sbjct: 228 EPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKG 282
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 38/79 (48%)
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F M + G P+V N ++R A ++D+ + EM G P+ + YNTL+ +
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243
Query: 268 AGKLAEAHEVIRHMVEKGK 286
G+ + +++ M +G
Sbjct: 244 EGRKDKIDMLLKEMEARGS 262
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 14/97 (14%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSYNAILH 53
MI +G P +A T+ ++I C G + G RK++E ++ P + +YN ++H
Sbjct: 573 MISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVE-------PNEITYNVLIH 625
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
AL + + +L + +M + G P+ TY +++ K
Sbjct: 626 ALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDGK 662
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 119/226 (52%), Gaps = 4/226 (1%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+++ G PD++TY++++ R G+ D LL++M R+G PD TY+ L++VL K
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A LL M+ G P+V+ + ++MDGL ++G +D ++ M C PDVV Y
Sbjct: 348 RKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++++ AG L+ A LF+ + + + P+ Y+ +I C AGK +EAC M ME
Sbjct: 408 SIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEV 467
Query: 249 RGCNPNFL-VYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
N LV+ L +A + A ++ E+G H V+K
Sbjct: 468 TVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERG---HRVTK 510
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 39/303 (12%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C V A KV+E+ ++ + P +Y +L+ L + KL V+Q+M G
Sbjct: 98 LCRASRVMDAYKVLEKMVEESIV---PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGC 154
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ +TY ++ R G++D+ R++ E D T ++ L K + AL
Sbjct: 155 KPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK 214
Query: 137 LLNHMKEVGFDPSVLHFTTL------------------------------------MDGL 160
+ M+++G P+ + ++ L +D L
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDAL 274
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+AG LD + +E+ G +PDVV Y+++I ++ AG+ + + +L + M G P+V
Sbjct: 275 CKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDV 334
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY+++I C KF +A +++ ME+ G PN + YN+++ L +GK+ E H V
Sbjct: 335 VTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEM 394
Query: 281 MVE 283
M++
Sbjct: 395 MLK 397
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 133/309 (43%), Gaps = 38/309 (12%)
Query: 20 CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
CG G+A + +E ++ + P YN I+ L + V ++M +E P+
Sbjct: 65 CG-AGMANQALE-LVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPN 122
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+ TY I++ R K + EM R+G P+ TY L+ L + + AL ++
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMI 182
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
+ + V+ TT++ GL +A LD F +EM G P+ V Y+ ++ + G
Sbjct: 183 EQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHG 242
Query: 200 E------------------------------------LEKAQDLFDGMITKGQLPNVFTY 223
E L++A+ + + G +P+V TY
Sbjct: 243 ELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTY 302
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ +I F AG+FD + ++++M G P+ + Y+TL++ L K +A ++ M
Sbjct: 303 SMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA 362
Query: 284 KGKYIHLVS 292
G ++V+
Sbjct: 363 AGSPPNVVT 371
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 4/235 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + ARK VE +S + P +Y+ +++ Q+ + + M G
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVV---PDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD++TY+ ++ + K RLL+ M +G P+ TYN ++ L K K
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M + P V+ ++ +M+GLS+AG LD+ F+ + + PD Y+++ITS
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Query: 197 AAGELEKAQDLFDGMITKGQLPNV-FTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
AG+LE+A ++ GM N+ ++ C A + D A +++ RG
Sbjct: 451 RAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERG 505
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y P + YN ++ R ++ +++L++M P+ TY ILL+ L + +K A
Sbjct: 84 YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAR 143
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+ MK G P+ + + TL+ LSRAG +D E + DV+ T ++
Sbjct: 144 EVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGL 203
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPN 254
A L+ A + M G PN TY++++ GF G+ D +E ++R G +
Sbjct: 204 CKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLE 263
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
Y + L AG L A + + + + G Y L++ F R
Sbjct: 264 AAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A K + G D +T++ T + + LF + ++G + TY ++
Sbjct: 2 AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G C AG ++A +++E+ S P +YN +++ L A ++ +A++V+ MVE+
Sbjct: 62 DGLCGAGMANQALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEE 117
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 138/325 (42%), Gaps = 50/325 (15%)
Query: 3 ENGFPTTARTFNILICTCGEV-------GLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
E+ P + +FNI++C +V L + ++ K K+ F N ++H L
Sbjct: 434 EDAKPNS-DSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMF-------NDLIHEL 485
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + ++ QM D G P TYN + R LL EM +G P
Sbjct: 486 CNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWI 545
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-------- 167
++ L + A+ L+ M ++GF P ++ ++ M+G+ G +D
Sbjct: 546 KNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRD 605
Query: 168 -ACKYFF--------------------------DEMANKGCMPDVVCYTVMITSYIAAGE 200
+CKY+ +EM KG P VV Y +MI G
Sbjct: 606 ISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGR 665
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+EKA D M+ + + P V TY S+I GFC AG+ DEA + EM +GC PN + Y
Sbjct: 666 IEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTA 725
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ LR G++ A MV KG
Sbjct: 726 FINGLRKCGRIETALTYFEEMVTKG 750
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 126/251 (50%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +S+N ++ L +++ + + + M G IL +N ++ + +L++ +
Sbjct: 437 KPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYG 496
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ ++M G +P TYN L + + + P AAL+LL M+ G P + + T ++ L
Sbjct: 497 IFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLC 556
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+G + F D M G +PD+V Y+ + GE++ A LF + K LP+V
Sbjct: 557 FSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVV 616
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+N +I GF + K DEA +M+EM +G P+ + YN ++ G++ +A + M
Sbjct: 617 AHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKM 676
Query: 282 VEKGKYIHLVS 292
V + K +++
Sbjct: 677 VYEEKQPTVIT 687
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
E P+ ++NIV+C ++ KLD L +M G +N L+H L D+
Sbjct: 434 EDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEE 493
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
+ N MK++G PS + +L G+ R + A EM G P + T M+
Sbjct: 494 GYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQ 553
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+G + +A DGM+ G LP++ TY++ + G C G+ D+A + +++ + P
Sbjct: 554 QLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLP 613
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + +N L++ R + KL EA +++ M+EKG + +V+
Sbjct: 614 DVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVT 652
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 15/277 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG P + ++ C G V A + ++ ++ F P +Y+A ++ +
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQ---IGFLPDIVTYSAAMNGMCN 592
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++ +S + Y PD++ +NI++ + KLD+ ++++EM G P T
Sbjct: 593 TGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVT 652
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+++ V K + A++ L+ M P+V+ +T+L+DG AG D + EM
Sbjct: 653 YNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMR 712
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+ + YT I G +E A F+ M+TKG + F+ I G
Sbjct: 713 EKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPM 772
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ C ++KE+ L +T +NL+ G + EA
Sbjct: 773 KGCELLKEV---------LQKDTYGNNLKMVGLINEA 800
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 17/291 (5%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGI-----RQYK 62
T L+ G GL V F ++ F P +YN +L AL Q +
Sbjct: 137 TPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQAR 196
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L E V + +G +++ C G+ D + + M G+ D H L+
Sbjct: 197 LREMVAR--CGDGSVDKYTLTSLLRC-YCNAGRPDDANDVFQRMSELGWV-DEHVLTTLM 252
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K A+ LL M+ +G S + L+ G ++ G +D F +M + G +
Sbjct: 253 VAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFV 312
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
D+ Y+V+I ++ +A LF M + G P+V +I FC G F
Sbjct: 313 VDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPF 372
Query: 243 MKE----MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+ E ++S P +YN ++ L + G++ A++++R MV G+ ++
Sbjct: 373 INENAEYLKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVN 420
>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
Length = 381
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 116/215 (53%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M EG P+++TYN+++ A R G +DQ LL+ + G P+ YN +L L ++
Sbjct: 7 MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ A LL+ M P+ +++ LSR G L + ++M+ GC +VV Y
Sbjct: 67 WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I+ G ++ A +L M + G P++ TYN++++G C A ++++A +M +M
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C P+ + +NT++S L G + +A EV + M EKG
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKG 221
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 142/288 (49%), Gaps = 7/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T+N++I C G+V AR+++ +P +YN +L L
Sbjct: 7 MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSR---GCKPNTVNYNTVLKGLCS 63
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I ++ E + +M E P+ T N+++ R G L + R L++M + G + + T
Sbjct: 64 IERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVT 123
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++ + + +AL LL++M+ G P ++ + TL+ GL A + + +M+
Sbjct: 124 YNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMS 183
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C+PD V + +I+ G + +A ++F M KG PN TY+++I G AGK +
Sbjct: 184 QNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKME 243
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ EM S+G N + + Y L +L K+ E +V+ + + G
Sbjct: 244 QALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSG 290
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 127/284 (44%), Gaps = 1/284 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ P T N+++ T GL +KV K +YNA++ +
Sbjct: 77 MVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGH 136
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M G PDI+TYN ++ + + L+ +M ++ PD T+N
Sbjct: 137 VDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNT 196
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L + L A + M E G +P+ ++T++ GL++AG ++ +EMA+KG
Sbjct: 197 IISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKG 256
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
D + Y ++ S ++E+ + + G P +N+++ C GK D A
Sbjct: 257 YNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAI 315
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ +M S GC P+ L Y L+ L G L EA E++ + +
Sbjct: 316 DVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSR 359
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 89/183 (48%)
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L+D M G P+ TYN+++ + + A LLN + G P+ +++ T++ GL
Sbjct: 2 ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ DEM + C P+ V++ + G L+K + M G NV
Sbjct: 62 CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TYN++I G C G D A ++ M+S GC P+ + YNTL+ L +A + +A E++
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181
Query: 281 MVE 283
M +
Sbjct: 182 MSQ 184
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 120/264 (45%), Gaps = 6/264 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G T+N +I E G +E + F +P +YN +L L Q
Sbjct: 112 MSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQ 171
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ E + +MS PD +T+N ++ + G + Q + +M G +P+ TY+
Sbjct: 172 WEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYST 231
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L K K AL LLN M G++ + + L + L++ ++ ++ + G
Sbjct: 232 IIGGLAKAGKMEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSG 290
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P V + ++ G+ + A D+ M++ G +P+ TY +I G G EA
Sbjct: 291 ISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEA- 349
Query: 241 TMMKEMESRGCNPNFLVYNTLVSN 264
+E+ SR C+ + L N+L+ N
Sbjct: 350 ---RELVSRLCSRDVL-SNSLIKN 369
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
D M +GC P+VV Y V+I + G++++A++L + + ++G PN YN++++G C
Sbjct: 3 LIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLC 62
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
++ +A ++ EM C PN N +V+ L G L + + M + G ++V
Sbjct: 63 SIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVV 122
Query: 292 S 292
+
Sbjct: 123 T 123
>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
Length = 592
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 139/320 (43%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P T+ LI G++ KV F++ N P ++N+++ L +
Sbjct: 239 MKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGK 298
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + M ++G P+ +TYN+VM G++ + R+ D M G PD +Y
Sbjct: 299 VEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTA 358
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + K A+ L + + G PS++ + L+ GL G + K FFDEM G
Sbjct: 359 LINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAG 418
Query: 181 CMP-----------------------------------DVVCYTVMITSYIAAGELEKAQ 205
+P ++ YT +I G+L+KA
Sbjct: 419 HIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAH 478
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
F+ + G P+V TY +MI G+C G DEA M+++ME GC P+ YN +V
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF 538
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ K++E ++ + K
Sbjct: 539 FRSSKVSEMKAFLKEIAGKS 558
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 97/193 (50%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD YNIV+ A + G LD LL+EM + PD TY L+ LGK + L
Sbjct: 211 PDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTL 270
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
M + P V F +++DGL + G ++ + M KG P+ + Y V++ Y
Sbjct: 271 FLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCL 330
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G++ +A+ +FD MI KG P++ +Y ++I G+ K D+A + +E+ G P+ +
Sbjct: 331 RGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVT 390
Query: 258 YNTLVSNLRNAGK 270
+ L+ L G+
Sbjct: 391 CSVLLRGLFEVGR 403
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 1/240 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++ ++ L + K +++++ E PD + Y VM + G + LL
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRL 203
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M + PD YNI++ K A +LLN MK+ P ++ +T+L+DGL +
Sbjct: 204 MEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQ 263
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ + F EM + PDV + +I G++E A+++ MI KG PN TYN
Sbjct: 264 WEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNV 323
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ G+C+ G+ A + M +G P+ + Y L++ K+ +A ++ R + + G
Sbjct: 324 VMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNG 383
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 132/277 (47%), Gaps = 3/277 (1%)
Query: 1 MIENGF--PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++E G P T +NI+I + G+ + K N P +Y +++ L +
Sbjct: 203 LMEQGITKPDTC-IYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKL 261
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q++ + ++ +M PD+ T+N V+ + GK++ ++ M G P+ TY
Sbjct: 262 SQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITY 321
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N+++ + A + + M + G +P ++ +T L++G +D F E++
Sbjct: 322 NVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQ 381
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G P +V +V++ G E A+ FD M G +PN++T+ +++ G+ G +E
Sbjct: 382 NGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEE 441
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
A + ++E R + N +Y +++ L GKL +AH
Sbjct: 442 AMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAH 478
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 15/152 (9%)
Query: 138 LNHMKEVGFDPSVLHF-----------TTLMDGLSRAGNLDACKYFFDEMANKG-CMPDV 185
L H ++GF +HF TTL+ GL + + F ++ + C PD
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDE 178
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++ G +KA DL M P+ YN +I FC G D A +++ E
Sbjct: 179 VMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNE 238
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
M+ + P+ + Y +L+ L GKL++ +V
Sbjct: 239 MKQKNIPPDIITYTSLIDGL---GKLSQWEKV 267
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y A+++ L + ++++ G PD++TY ++ + G LD+ +L +M
Sbjct: 461 YTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKME 520
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+G PD TYN+++ + K L + F LMD ++ +L
Sbjct: 521 DNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL 579
>gi|302765375|ref|XP_002966108.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
gi|300165528|gb|EFJ32135.1| hypothetical protein SELMODRAFT_85930 [Selaginella moellendorffii]
Length = 382
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 3/220 (1%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
++ M G D + Y +++ ++ +LDQ +L EM G P+ TYN L+ L K
Sbjct: 36 FRTMQGAGIVADTVIYTVLLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 95
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY--FFDEMANKGCMPDV 185
++P A L HMK V P ++ + TL+DGL G L++ + M +GC PDV
Sbjct: 96 NNEPDRAQELFEHMKSVECSP-LVTYNTLLDGLFWTGKLESAMAVELLESMKARGCSPDV 154
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ T+++ ++ A ++ M+ G +PN+ T S++ G C A + +A +M++
Sbjct: 155 ITSTILVDGLCKESKVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRD 214
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M RGC PN + Y TL+ L G++ +A + M G
Sbjct: 215 MTCRGCTPNVVTYGTLIDGLCKVGRVKDAGNLYEVMTGDG 254
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 126/281 (44%), Gaps = 31/281 (11%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y +L L ++ + +M D G P+++TYN ++ + + D+ L + M
Sbjct: 51 YTVLLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMK 110
Query: 108 RSGFSPDFHTYNILLHVL---GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
SP TYN LL L GK + +A + LL MK G P V+ T L+DGL +
Sbjct: 111 SVECSP-LVTYNTLLDGLFWTGKLESAMA-VELLESMKARGCSPDVITSTILVDGLCKES 168
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ A EM + GC+P++V ++ A + A L M +G PNV TY
Sbjct: 169 KVAAAWEVLCEMLDAGCVPNLVTSKSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 228
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV-- 282
++I G C G+ +A + + M GC+ + + Y+TL+ L G++ EAH ++ MV
Sbjct: 229 TLIDGLCKVGRVKDAGNLYEVMTGDGCDADVVTYSTLIDGLCKGGRVDEAHLLLARMVRM 288
Query: 283 ------------------------EKGKYIHLVSKFKRYKR 299
EKG IH+ + K YKR
Sbjct: 289 GTPSSTLTYNLQHFEGKMVKVDSLEKGMAIHIQAAEKGYKR 329
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 3/192 (1%)
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
DEM + P+ +IL+ L K + + L M+ G + +T L+ GL +
Sbjct: 2 DEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWKE 61
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
LD EM + GC P+VV Y +I E ++AQ+LF+ M + P + TY
Sbjct: 62 KRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-LVTY 120
Query: 224 NSMIRGFCMAGKFDE--ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
N+++ G GK + A +++ M++RGC+P+ + LV L K+A A EV+ M
Sbjct: 121 NTLLDGLFWTGKLESAMAVELLESMKARGCSPDVITSTILVDGLCKESKVAAAWEVLCEM 180
Query: 282 VEKGKYIHLVSK 293
++ G +LV+
Sbjct: 181 LDAGCVPNLVTS 192
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%)
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
FDEM + +P++ +++I A F M G + + Y ++ G
Sbjct: 1 FDEMRSNNMVPNMFLCSILIDGLCKAKRSIDVLRCFRTMQGAGIVADTVIYTVLLSGLWK 60
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ D+A ++ EM GC PN + YN+L+ L + A E+ HM
Sbjct: 61 EKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 109
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 126/253 (49%), Gaps = 9/253 (3%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
+LF P KN SYN +L AL + K ++ +M+ APD++TY I++ LG
Sbjct: 249 ELFQELPHKNVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGILIHGHCALG 305
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM--KEVGFDPSVLH 152
+L+ +LLDEM G P+ Y ++ +L AL ++ M ++V D ++
Sbjct: 306 ELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEAL-- 363
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+TT++ G G+L + + +FDEM KG D V YT MI A ELE+A+ L M
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMW 423
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ + TY +I G+C GK EA M M RG PN + Y L L G +
Sbjct: 424 ARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQ 483
Query: 273 EAHEVIRHMVEKG 285
A+E++ M KG
Sbjct: 484 AANELLHEMSNKG 496
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFN---ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G A + L+C G + A +VVE ++ K+ Y +L
Sbjct: 317 MVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEAL---YTTVLSGFCN 373
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M +G A D +TY ++ R +L++ +LL EM D T
Sbjct: 374 KGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVT 433
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ K K A + N M + G P+V+ +T L DGL + G++ A EM+
Sbjct: 434 YTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMS 493
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG + Y +I AG LE+A M T P+V+TY ++I C +G D
Sbjct: 494 NKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLD 553
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A ++++EM +G P + YN L++ +G++ +++ M+EK
Sbjct: 554 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEK 600
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 103/219 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M G P+++TY + + G + + LL EM G + TYN L++ L
Sbjct: 453 MHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLC 512
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ + M P V +TTL+D L ++G+LD EM +KG P +V
Sbjct: 513 KAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIV 572
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y V++ + +G +E + L D M+ K PN TYNS+++ +C+ + K M
Sbjct: 573 TYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGM 632
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
SR PN YN L+ A + EA M++KG
Sbjct: 633 RSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKG 671
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 121/277 (43%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ ILI C GE+ A K+++ + P Y +++ L V
Sbjct: 293 TYGILIHGHCALGELENAVKLLDEMVAG---GVEPNATVYTSVVALLCDKGWISDALRVV 349
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M D Y V+ G L R DEM R G + D TY +++ L +
Sbjct: 350 EDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRA 409
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A LL M D + +T L+DG + G + + M +G P+VV Y
Sbjct: 410 VELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTY 469
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T + G+++ A +L M KG N TYNS+I G C AG ++A M +M++
Sbjct: 470 TALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDT 529
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y TL+ L +G L AH +++ M++KG
Sbjct: 530 ACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKG 566
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 123/277 (44%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ +LI C G++ A ++ ++ P +Y A+ L + +
Sbjct: 433 TYTVLIDGYCKRGKMAEAFQMHNAMVQR---GVTPNVVTYTALTDGLCKQGDVQAANELL 489
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+MS++G + TYN ++ + G L+Q R + +M + PD +TY L+ L K
Sbjct: 490 HEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKS 549
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A +LL M + G P+++ + LM+G +G ++ K D M K P+ Y
Sbjct: 550 GDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATY 609
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ Y ++ +++ GM ++ PN TYN +I+G C A EA EM
Sbjct: 610 NSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQ 669
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G Y+ L+ L K EA E+ M ++G
Sbjct: 670 KGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEG 706
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 13/185 (7%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL + + G SP N +L L PL A+ L + +V + L+ L
Sbjct: 219 LLRRLRQYGISPSPEACNAVLSRL-----PLDEAIELFQELPH----KNVCSYNILLKAL 269
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
AG + + FDEMA+ PDVV Y ++I + A GELE A L D M+ G PN
Sbjct: 270 CDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNA 326
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
Y S++ C G +A ++++M R + +Y T++S N G L A
Sbjct: 327 TVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDE 386
Query: 281 MVEKG 285
M KG
Sbjct: 387 MQRKG 391
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 118/238 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 145 FNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMX 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 205 ASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ +PD++ Y +I G+L++A DL M KG P+ TY ++I
Sbjct: 265 LAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G B A M + + Y L+S L G+ +A +++R M+ G
Sbjct: 325 DGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVG 382
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 134/276 (48%), Gaps = 6/276 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
F+ LI E G R +E + ++ F ++ +L L+ ++ +KL+ Y+++
Sbjct: 74 VFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKLKYFKLVWGFYKEI 133
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKG 128
+ GY + +NI+M + G + + D + + G P +YN L++ LG
Sbjct: 134 LECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 193
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D+ L + M G P V ++ L++GL + +D FDEM KG +P+ V +
Sbjct: 194 DE---GFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTF 250
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I + G ++ A +++ M+++ LP++ TYN +I G C G +A ++ EM
Sbjct: 251 TTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSM 310
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+G P+ + Y TL+ G L A E M+E+
Sbjct: 311 KGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEE 346
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 133/295 (45%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A V + K + RP SYN +++ +
Sbjct: 133 ILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITK---WGLRPSVVSYNTLMNGYIR 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 190 LGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + L+ GL + G+L EM+
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMS 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G L+ A + MI + + Y ++I G C G+
Sbjct: 310 MKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXV 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++ M S G P+ Y +++ G + + ++++ M G +V+
Sbjct: 370 DAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 424
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 127/280 (45%), Gaps = 40/280 (14%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
P SYN +L L+ + V+ +M +G P + T+ +VM A + ++D
Sbjct: 170 EPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACS 229
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-------------------- 141
LL +M + G P+ Y L+H L K D+ AL LL M
Sbjct: 230 LLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLC 289
Query: 142 ---------KEV------GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K V GF P+ + + LM+GL R G +D + NK P+ V
Sbjct: 290 RLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLL----NKVPTPNDV 345
Query: 187 CYTVMITSYIAAGELEKAQD-LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+T++I Y+ +G L++A L+D MI G P+VFT+N++I G C G A M+ +
Sbjct: 346 HFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M + GC PN + Y TL+ +L EA V+ M KG
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKG 445
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 134/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+NG TFN LI + GL V+ P +Y +L Q
Sbjct: 371 MIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQ 430
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +V +MS +G+ +I+ YN+++ A + GK+ + +L EM G PD T+N
Sbjct: 431 LEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNT 490
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K D+ AL L M G + + + TL+ R G + ++M +G
Sbjct: 491 LIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C D + Y +I ++ G EKA LFD M+ K +P+ + N +I G C GK A
Sbjct: 551 CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNAL 610
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++M RG P+ + YN+L++ L G + EA + + +G
Sbjct: 611 ELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 147/278 (52%), Gaps = 11/278 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFN +I C + K+V+R + F P +Y +++ L R K+ E
Sbjct: 280 TFNDVIYGLCRLNRIHEGAKLVDRML---FRGFTPNDITYGVLMNGL--CRVGKVDE--A 332
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL-DEMGRSGFSPDFHTYNILLHVLGK 127
Q + ++ P+ + + I++ + G+LD+ + L D+M ++G PD T+N L+H L K
Sbjct: 333 QVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCK 392
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+A++++N M G P+++ +TTL+DG + L+ Y +EM+ KG +++
Sbjct: 393 KGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMG 452
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y V++ + G++ KA D+ M KG P++FT+N++I G C + ++A + ++M
Sbjct: 453 YNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDML 512
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G N + YNTL+ G + EA +++ M+ +G
Sbjct: 513 LDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 145/327 (44%), Gaps = 38/327 (11%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T TF ++ +C EV A ++ K P Y ++HAL
Sbjct: 199 MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCV---PNSVVYQTLIHALSK 255
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M G PD+ T+N V+ RL ++ + +L+D M GF+P+ T
Sbjct: 256 RDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDIT 315
Query: 118 YNILLHVL---GKGDKPLAALN-----------------------------LLNHMKEVG 145
Y +L++ L GK D+ LN L + M + G
Sbjct: 316 YGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNG 375
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P V F TL+ GL + G + + ++M+ GC P+++ YT ++ + +LE+A
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAG 435
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ + M KG N+ YN ++R C GK +A M+ EM +GC P+ +NTL+ L
Sbjct: 436 YVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGL 495
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ +A + R M+ G + V+
Sbjct: 496 CKVDRKEDALALYRDMLLDGVIANTVT 522
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 15/290 (5%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ GF T+ +L +C G+V A+ ++ + +F N Y
Sbjct: 304 MLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGY--------- 354
Query: 58 IRQYKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
++ +L E ++Y +M G PD+ T+N ++ + G + ++++M +G +P+
Sbjct: 355 VKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPN 414
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TY LL K ++ A +LN M GF+ +++ + L+ L + G +
Sbjct: 415 LITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLG 474
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM++KGC PD+ + +I E A L+ M+ G + N TYN++I F G
Sbjct: 475 EMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGG 534
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EA ++ +M RGC + + YN L+ G +A + MV K
Sbjct: 535 AIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRK 584
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR-LLDEM 106
Y+ ++ L +++K+I+ + Q+ +EG A + +M R Q R LLD
Sbjct: 105 YHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDMK 164
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G P F +YN++L +L + P A N+ M G P+V F +M L +
Sbjct: 165 GVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEV 224
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D +M GC+P+ V Y +I + + +A L + M G LP+V T+N +
Sbjct: 225 DNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDV 284
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I G C + E ++ M RG PN + Y L++ L GK+ EA +V+ + V
Sbjct: 285 IYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEA-QVLLNKVPTPN 343
Query: 287 YIHLVSKFKRYKR 299
+H Y +
Sbjct: 344 DVHFTILINGYVK 356
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 125/271 (46%), Gaps = 1/271 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M GF +N+L+ + G K ++ + +P ++N ++ L + +
Sbjct: 441 MSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDR 500
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +Y+ M +G + +TYN ++ A R G + + +L+++M G D TYN
Sbjct: 501 KEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNG 560
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K AL L + M PS + L++GL R G + +M ++G
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y +I G + +A +LF+ + +G P+ TYN++I C AG FD+A
Sbjct: 621 LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAY 680
Query: 241 TMMKEMESRGCNPNFLVYNTLVSN-LRNAGK 270
++ PN + + LVSN ++ GK
Sbjct: 681 LLLLRGVENAFIPNDVTWYILVSNFIKEIGK 711
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 3/180 (1%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL- 166
+ G+ F Y++L+ LG + LL +KE G F +M RA NL
Sbjct: 95 QKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRA-NLP 153
Query: 167 -DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
A + D C P Y V++ ++A A ++F M++KG +P V+T+
Sbjct: 154 GQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGV 213
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ CM + D AC+++++M GC PN +VY TL+ L ++ EA +++ M G
Sbjct: 214 VMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMG 273
>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Glycine max]
Length = 804
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 116/232 (50%), Gaps = 1/232 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHRLLDE 105
+Y +++A +Y+ ++ +M +G P ++TYN+V+ ++G L++
Sbjct: 195 AYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEA 254
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M G +PD +TYN L+ +G A++L MK GF P + + L+D ++
Sbjct: 255 MRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRR 314
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM G P V Y +I++Y G LE+A DL M+ KG P+VFTY +
Sbjct: 315 PQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTT 374
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
++ GF AGK D A + EM + GC PN +N L+ N GK AE +V
Sbjct: 375 LLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKV 426
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 141/292 (48%), Gaps = 9/292 (3%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQYKLIEWVYQQ 70
+ LI G R V F K + P +YN +L+ +G+ + + + +
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGM-PWSNVTALVEA 254
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G APD+ TYN ++ R ++ L +M GF+PD TYN LL V GK +
Sbjct: 255 MRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRR 314
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P A+ +L M+ GF P+ + + +L+ ++ G L+ +M +KG PDV YT
Sbjct: 315 PQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTT 374
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+++ + AG+ + A +F M G PN+ T+N++I+ GKF E + +++
Sbjct: 375 LLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCN 434
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKFKR 296
C+P+ + +NTL++ G ++ + + M E+ + L+S + R
Sbjct: 435 CSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSR 486
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T+N LI C L + V F + KL F P K +YNA+L R+
Sbjct: 255 MRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRR 314
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V Q+M G++P +TYN ++ A + G L++ L +M G PD TY
Sbjct: 315 PQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTT 374
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL K K A+ + M+ VG P++ F L+ G FD++
Sbjct: 375 LLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCN 434
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+V + ++ + G + +F M G + T+N++I + G FD+A
Sbjct: 435 CSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAM 494
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ K M G P+ YN +++ L G ++ +V+ M E G+
Sbjct: 495 AVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEM-EDGR 539
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 135/286 (47%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIR 59
M ++G T T+N+++ G++G+ V +++ + P +YN ++
Sbjct: 219 MQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGS 278
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Y+ ++QQM EG+ PD +TYN ++ + + + ++L EM +GFSP TYN
Sbjct: 279 LYEEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYN 338
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ KG AL+L M G P V +TTL+ G +AG D F EM
Sbjct: 339 SLISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAV 398
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ + +I + G+ + +FD + P++ T+N+++ F G +
Sbjct: 399 GCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQV 458
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G +NTL+S G +A V + M+E G
Sbjct: 459 SGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAG 504
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 137/320 (42%), Gaps = 43/320 (13%)
Query: 1 MIENGFPTTARTFNILICT---CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M GF TFN LI CG A V + +++ + P ++YNA+L AL
Sbjct: 465 MKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVV---PDLSTYNAVLAALAR 521
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK---------------------- 95
++ E V +M D P+ L+Y+ ++ A Y GK
Sbjct: 522 GGLWEQSEKVLAEMEDGRCKPNELSYSSLLHA-YANGKEIERMNAFAEEIYSGSVETHAV 580
Query: 96 --------------LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
L + R E+ R G SPD T N +L + G+ A +LN M
Sbjct: 581 LLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFM 640
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
E F PS+ + +LM SR+ N + E+ KG PD + Y +I +Y G +
Sbjct: 641 HETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRM 700
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A +F M +P+V TYN+ I + F EA +++ M +GC P+ YN++
Sbjct: 701 KEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSI 760
Query: 262 VSNLRNAGKLAEAHEVIRHM 281
V + EA+ ++++
Sbjct: 761 VDWYCKLDQRHEANSFVKNL 780
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 137/313 (43%), Gaps = 43/313 (13%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V F + K F ++++N ++ A + VY+ M
Sbjct: 441 TWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSM 500
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G PD+ TYN V+ A R G +Q ++L EM P+ +Y+ LLH G +
Sbjct: 501 LEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKE- 559
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGL----SRAGNLDACKYFFDEMANKGCMPDVVC 187
+ +N E + SV L+ L S++ L + F E+ +G PD+
Sbjct: 560 ---IERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITT 616
Query: 188 YTVMITSY------IAAGEL-----------------------------EKAQDLFDGMI 212
M++ Y A E+ +K++++ ++
Sbjct: 617 LNAMLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVL 676
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
KG P+ +YN++I +C G+ EA + EM+ P+ + YNT ++ A
Sbjct: 677 EKGMKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFA 736
Query: 273 EAHEVIRHMVEKG 285
EA +V+R+M+++G
Sbjct: 737 EAIDVVRYMIKQG 749
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 130/320 (40%), Gaps = 39/320 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN--FRPFKNSYNAILHALLGI 58
M NGF T+ T+N LI + GL + ++ +K+++ + +P +Y +L
Sbjct: 325 MEANGFSPTSVTYNSLISAYAKGGLLEEALD--LKTQMVHKGIKPDVFTYTTLLSGFEKA 382
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ V+ +M G P+I T+N ++ GK + ++ D++ SPD T+
Sbjct: 383 GKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTW 442
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N LL V G+ + MK GF F TL+ SR G+ D + M
Sbjct: 443 NTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLE 502
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC------- 231
G +PD+ Y ++ + G E+++ + M PN +Y+S++ +
Sbjct: 503 AGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIER 562
Query: 232 --------MAGKFDEACTMMK--------------------EMESRGCNPNFLVYNTLVS 263
+G + ++K E+ RG +P+ N ++S
Sbjct: 563 MNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLS 622
Query: 264 NLRNAGKLAEAHEVIRHMVE 283
+A+AHE++ M E
Sbjct: 623 IYGRKQMVAKAHEILNFMHE 642
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 35/283 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA------ 54
M+E G T+N ++ GL + + + + +P + SY+++LHA
Sbjct: 500 MLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKE 559
Query: 55 ---------------------------LLGIRQYKLIEW--VYQQMSDEGYAPDILTYNI 85
L+ + LIE + ++ G +PDI T N
Sbjct: 560 IERMNAFAEEIYSGSVETHAVLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNA 619
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ R + + H +L+ M + F+P TYN L+++ + + + +L + E G
Sbjct: 620 MLSIYGRKQMVAKAHEILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKG 679
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P + + T++ R G + F EM + +PDVV Y I +Y A +A
Sbjct: 680 MKPDRISYNTVIYAYCRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAI 739
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
D+ MI +G P+ TYNS++ +C + EA + +K + +
Sbjct: 740 DVVRYMIKQGCKPDQNTYNSIVDWYCKLDQRHEANSFVKNLSN 782
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 99/219 (45%), Gaps = 42/219 (19%)
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+++ +LGK + +A +LL ++ G V +T L++ S +G F++M
Sbjct: 163 VIIKILGKAGRVSSAASLLLALQNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQD 222
Query: 180 GCMPDVVCYTVM-------------ITSYIAA----------------------GEL-EK 203
GC P ++ Y V+ +T+ + A G L E+
Sbjct: 223 GCNPTLITYNVVLNVYGKMGMPWSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEE 282
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A LF M +G P+ TYN+++ F + + EA +++EME+ G +P + YN+L+S
Sbjct: 283 AVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLIS 342
Query: 264 NLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
G L EA ++ MV KG Y L+S F++
Sbjct: 343 AYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEK 381
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 141/293 (48%), Gaps = 15/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G A T+ ++ C G+ LA RK+ ER IK Y+ I+
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV-------KYSIIID 271
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L ++ +M +G +I+TYNI++ G+ D +LL +M + +P
Sbjct: 272 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 331
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+++L+ K K A L M G P + +T+L+DG + +LD
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC P++ + ++I Y A ++ +LF M +G + + TYN++I+GFC
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 451
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
GK + A + +EM SR PN + Y L+ L + G+ +A E+ +EK K
Sbjct: 452 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK-IEKSK 503
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQ 60
G T +I+I C C ++ LA + + IK + P +++ +++ L L R
Sbjct: 118 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIK---LGYEPNTITFSTLINGLCLEGRV 174
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +E V +M + G+ PD++T N ++ GK + L+D+M G P+ TY
Sbjct: 175 SEALELV-DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L+V+ K + A+ LL M+E + ++ ++DGL + G+LD F+EM KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293
Query: 181 CM-----------------------------------PDVVCYTVMITSYIAAGELEKAQ 205
P+VV ++V+I S++ G+L +A+
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+L MI +G P+ TY S+I GFC D+A M+ M S+GC+PN +N L++
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
A ++ + E+ R M +G
Sbjct: 414 CKANRIDDGLELFRKMSLRG 433
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+NILI C G K++ IK K+ P +++ ++ + + +
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI---NPNVVTFSVLIDSFVKEGKL 349
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ E ++++M G APD +TY ++ + LD+ ++++D M G P+ T+NIL
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K ++ L L M G + + TL+ G G L+ K F EM ++
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++V Y +++ GE EKA ++F+ + ++ YN +I G C A K D+A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +G P YN ++ L G L+EA + R M E G
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 573
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 106/253 (41%), Gaps = 35/253 (13%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M P ++ ++ + A + + D L +M G + + +T +I+++
Sbjct: 75 LFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC 134
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ K A + + + ++G++P+ + F+TL++GL G + D M G PD++
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLI 194
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS--------------------- 225
++ +G+ +A L D M+ G PN TY
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 226 --------------MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+I G C G D A + EME +G N + YN L+ NAG+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 272 AEAHEVIRHMVEK 284
+ +++R M+++
Sbjct: 315 DDGAKLLRDMIKR 327
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+NI+I C +V A + F L +P +YN ++ L E +++
Sbjct: 511 YNIIIHGMCNASKVDDAWDL---FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M ++G+APD TYNI++ A G + +L++E+ R GFS D T +++ +L G
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGR 627
Query: 130 KPLAALNLLN 139
+ L++L+
Sbjct: 628 LKKSFLDMLS 637
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N LI C G++ +A+++ + + K+ P +Y +L L +
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV---PPNIVTYKILLDGLCDNGES 489
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +++++ DI YNI++ K+D L + G P TYNI+
Sbjct: 490 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 549
Query: 122 LHVLGKGDKPLAALNLL-NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY--FFDEMAN 178
+ L K PL+ LL M+E G P + L+ + G+ DA K +E+
Sbjct: 550 IGGLCK-KGPLSEAELLFRKMEEDGHAPDGWTYNILIR--AHLGDGDATKSVKLIEEL-- 604
Query: 179 KGCMPDVVCYTV-MITSYIAAGELEKA 204
K C V T+ M+ ++ G L+K+
Sbjct: 605 KRCGFSVDASTIKMVIDMLSDGRLKKS 631
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 4/275 (1%)
Query: 12 TFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T I + C G V + + F K F +P SY ++ L+ Q K+ Y
Sbjct: 84 TEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFY 143
Query: 69 QQMSDEGYAPDILTYNIVMCAKYR-LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ M + G +++ N+++ A + G +D + EM + G PD +TY L++ L K
Sbjct: 144 KYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCK 203
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A L M G PSV+ ++ LM GL +AGN+D FD+M K P+V
Sbjct: 204 LGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFT 263
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y+ ++ G +A +L + M+ K PN+ TY+++I G C GK EA + M+
Sbjct: 264 YSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMK 323
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+G P+ +Y +++ N K EA + MV
Sbjct: 324 LQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMV 358
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 136/293 (46%), Gaps = 21/293 (7%)
Query: 4 NGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFN----FRPFKNSYNAILHALL 56
NGF TF ++I + E A +++ R + K F Y + L
Sbjct: 44 NGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLD 103
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSP 113
IR V+ +M+D G P +Y V + + +L F++ + EMG
Sbjct: 104 AIR-------VFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMG---VRQ 153
Query: 114 DFHTYNILLHVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
+ N+L+ L K + AA + M + G DP + TL++GL + G K
Sbjct: 154 SVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKEL 213
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F EM KGC P VV Y+ ++ AG +++A LFD M K PNVFTY+S++ G C
Sbjct: 214 FKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCK 273
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G EA +++ M + PN + Y+TL++ L GKLAEA E + M +G
Sbjct: 274 NGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQG 326
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M G PD TY ++ +LGK + L EM G SP TY+ L+H L
Sbjct: 178 IFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLC 237
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ L + MK+ +P+V +++LMDGL + G + M K P++V
Sbjct: 238 QAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMV 297
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I G+L +A + D M +G P+ Y +I GFC KF EA T + EM
Sbjct: 298 TYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEM 357
Query: 247 ESRGCNPNFLVY-------NTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
+PN + + N +V L G L + ++ M +G I
Sbjct: 358 VLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISI 406
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 130/293 (44%), Gaps = 8/293 (2%)
Query: 1 MIENGFPTTARTFNILI-CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G + + N+LI C G E F + P +Y +++ L +
Sbjct: 146 MREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLG 205
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + ++++M +G +P ++TY+ +M + G +D+ L D+M + P+ TY+
Sbjct: 206 KTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYS 265
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K L A+ LL M P+++ ++TL++GL + G L D M +
Sbjct: 266 SLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQ 325
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY-------NSMIRGFCM 232
G PD Y +I + + ++A D M+ PN T+ N +++G C
Sbjct: 326 GLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCT 385
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + + M +RG + + +++LV G L +A + MV G
Sbjct: 386 NGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDG 438
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 148/300 (49%), Gaps = 13/300 (4%)
Query: 1 MIENGFPTTARTFNILICTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
M+E G N L C G+ + L K+ E IK+ + YNAI+ L
Sbjct: 36 MVEEGHQPYGTIINGL-CKMGDTESALNLLSKMEETHIKAHVV-------IYNAIIDRLC 87
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + ++ +M D+G PD++TY+ ++ + R G+ +LL +M +PD
Sbjct: 88 KDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVV 147
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T++ L++ L K K A + M G P+ + + +++DG + L+ K D M
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
A+K C PDVV ++ +I Y A ++ ++F M +G + N TY ++I GFC G
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV-SKFK 295
D A ++ M S G PN++ + +++++L + +L +A ++ + + +V +KFK
Sbjct: 268 DAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIVQAKFK 327
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 39/257 (15%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M + G PD++T+ +M G++ Q L+D M G P Y +++ L K
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ALNLL+ M+E V+ + ++D L + G+ + F EM +KG PDV+ Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 191 MITSY-----------------------------------IAAGELEKAQDLFDGMITKG 215
MI S+ + G++ +A++++ M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P TYNSMI GFC + ++A M+ M S+ C+P+ + ++TL++ A ++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 276 EVIRHMVEKGKYIHLVS 292
E+ M +G + V+
Sbjct: 237 EIFCEMHRRGIVANTVT 253
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 144/283 (50%), Gaps = 5/283 (1%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
FN LI T G + A+ V+ + S + P +YN++++ L V
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTS--YGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M ++G P++ +Y I++ +LGK+D+ + +L+EM G P+ +N L+ K
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ + M G P V F +L+ GL + + +M ++G + + V Y
Sbjct: 474 RIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYN 533
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I +++ GE+++A+ L + M+ +G + TYNS+I+G C AG+ D+A ++ ++M
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G P+ + N L++ L +G + EA E + MV +G +V+
Sbjct: 594 GHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 134/265 (50%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G VGLA +V+ +++K +P SY ++ + + V +MS +G P+
Sbjct: 403 GLVGLALEVLHD-MRNK--GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNT 459
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ +N ++ A + ++ + + EM R G PD +T+N L+ L + D+ AL LL
Sbjct: 460 VGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRD 519
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G + + + TL++ R G + + +EM +G D + Y +I AGE
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGE 579
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
++KA+ LF+ M+ G P+ + N +I G C +G +EA KEM RG P+ + +N+
Sbjct: 580 VDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNS 639
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L++ L AG++ + + R + +G
Sbjct: 640 LINGLCRAGRIEDGLTMFRKLQAEG 664
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 138/299 (46%), Gaps = 35/299 (11%)
Query: 20 CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
C V A +++E L P ++N ++ L + + +M G+APD
Sbjct: 265 CNRVNEALQLLEEMF---LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPD 321
Query: 80 ILTYNIVM----------CAK---YRL------------------GKLDQFHRLLDEMGR 108
+TY +M AK YR+ G+LD +L +M
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVT 381
Query: 109 S-GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
S G PD TYN L++ K AL +L+ M+ G P+V +T L+DG + G +D
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+EM+ G P+ V + +I+++ + +A ++F M KG P+V+T+NS+I
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G C + A ++++M S G N + YNTL++ G++ EA +++ MV +G
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGS 560
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 143/290 (49%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G ++ IL+ C G++ A V+ L +P +N ++ A
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGL---KPNTVGFNCLISAF-- 469
Query: 58 IRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+++++ E V +++M +G PD+ T+N ++ + ++ LL +M G +
Sbjct: 470 CKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANT 529
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L++ + + A L+N M G + + +L+ GL RAG +D + F++
Sbjct: 530 VTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G P + ++I +G +E+A + M+ +G P++ T+NS+I G C AG+
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ TM +++++ G P+ + +NTL+S L G + +A ++ +E G
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG 699
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 40/284 (14%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLD 97
+++ P SYN +L L+ +K+ V+ M P + T+ +VM A + ++D
Sbjct: 175 VYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEID 234
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL------------------- 138
LL +M + G P+ Y L+H L K ++ AL LL
Sbjct: 235 SALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVI 294
Query: 139 ----------------NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
N M GF P + + LM+GL + G +DA K F +
Sbjct: 295 LGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK---- 350
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITK-GQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++V + +I ++ G L+ A+ + M+T G +P+V TYNS+I G+ G A
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +M ++GC PN Y LV GK+ EA+ V+ M G
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 124/265 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G FN LI + + VE F + +P ++N+++ L + +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K W+ + M EG + +TYN ++ A R G++ + +L++EM G D TYN
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + A +L M G PS + L++GL R+G ++ F EM +G
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRG 629
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V + +I AG +E +F + +G P+ T+N+++ C G +AC
Sbjct: 630 STPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC 689
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
++ E G PN ++ L+ ++
Sbjct: 690 LLLDEGIEDGFVPNHRTWSILLQSI 714
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 3/232 (1%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++ L ++K I+ + QM DEG + +M + G Q RL+ EM
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEM- 172
Query: 108 RSGFS--PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
R+ +S P F +YN++L +L G+ A N+ M P++ F +M
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+D+ +M GC+P+ V Y +I S + +A L + M G +P+ T+N
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+I G C + +EA M+ M RG P+ + Y L++ L G++ A ++
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
++G+ F Y +L+ LG + LL MK+ G F ++M +AG
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFP 162
Query: 167 DACKYFFDEMANK-GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
EM N C P Y V++ ++ + A ++F M+++ P +FT+
Sbjct: 163 GQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGV 222
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ FC + D A +++++M GC PN ++Y TL+ +L ++ EA +++ M G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 10/208 (4%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKN-SYNAILHALL 56
MI G T+N LI GE+ ARK+V + F P +YN+++ L
Sbjct: 520 MISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV----FQGSPLDEITYNSLIKGLC 575
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ ++++M +G+AP ++ NI++ R G +++ EM G +PD
Sbjct: 576 RAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIV 635
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDE 175
T+N L++ L + + L + ++ G P + F TLM L + G + DAC DE
Sbjct: 636 TFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC-LLLDE 694
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEK 203
G +P+ +++++ S I L++
Sbjct: 695 GIEDGFVPNHRTWSILLQSIIPQETLDR 722
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P T+N LI C GEV AR + E+ ++ P S N +++ L
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD---GHAPSNISCNILINGLCR 611
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++M G PDI+T+N ++ R G+++ + ++ G PD T
Sbjct: 612 SGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVT 671
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
+N L+ L KG A LL+ E GF P+ ++ L+ + LD +++
Sbjct: 672 FNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFY 726
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 109/252 (43%), Gaps = 35/252 (13%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M + G D++TYN ++ R LD L EM G PDF+T L+H K
Sbjct: 423 NEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKD 482
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK------------------ 170
AL+L M P V+ + TLMDG + G ++ K
Sbjct: 483 GNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF 542
Query: 171 -----------------YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
+DEM KG P +V +I Y+ AG L KA D + MI+
Sbjct: 543 SILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMIS 602
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G P+ TYN++I F FD A ++ ME RG PN + YN ++ G++ E
Sbjct: 603 EGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQE 662
Query: 274 AHEVIRHMVEKG 285
A V+ M++KG
Sbjct: 663 AEMVLHKMIDKG 674
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 6/284 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G A++V++ + L P ++N +L E V+
Sbjct: 296 TYNALINGLCKEGSYERAKRVLDEMLGVGLC---PNAATFNPMLVESCRKEDVWEAERVF 352
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M G PD+++++ ++ R G+L + ++M G PD Y IL++ +
Sbjct: 353 NEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRN 412
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D AL + N M E G V+ + TL++GL R LD F EM +G PD
Sbjct: 413 DDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTL 472
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I Y G + KA LF+ M + P+V TYN+++ GFC G+ ++A + +M S
Sbjct: 473 TTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMIS 532
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
R P+++ ++ L++ + G ++EA + M EKG LV+
Sbjct: 533 REIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 138/287 (48%), Gaps = 8/287 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKS-KLFNFRPFKNSYNAILHALLGIRQ 60
GF + N L I G V LA KV E F+KS + N + N +++AL +
Sbjct: 184 GFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVY----TLNIMVNALCKDGK 239
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M ++G D++TYN ++ A R G + + L+D M G P TYN
Sbjct: 240 LDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNA 299
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K A +L+ M VG P+ F ++ R ++ + F+EM +G
Sbjct: 300 LINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRG 359
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD++ ++ ++ + GEL +A F+ M G +P+ Y +I G+C A
Sbjct: 360 VVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGAL 419
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
M EM RGC + + YNTL++ L L +A E+ + MVE+G +
Sbjct: 420 KMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVF 466
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+N L+ C G V A +V+ L +P +YNA+++ L
Sbjct: 250 MEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGL---KPGLFTYNALINGLCK 306
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y+ + V +M G P+ T+N ++ R + + R+ +EM + G PD +
Sbjct: 307 EGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLIS 366
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ ++ V + + AL MK VG P + +T L++G R ++ +EM
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+GC+ DVV Y ++ L+ A +LF M+ +G P+ +T ++I G+C G
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A ++ + M R P+ + YNTL+ G++ +A E+ M+ + + +S
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYIS 541
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 109/218 (50%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++M G PD + Y I++ R + ++ +EM G D TYN LL+ L +
Sbjct: 387 FEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCR 446
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
G A L M E G P TTL+ G + GN+ F+ M + PDVV
Sbjct: 447 GKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVT 506
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ + GE+EKA++L+ MI++ P+ +++ +I GFC G EA + EM+
Sbjct: 507 YNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK 566
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P + NT++ AG L++A++ + M+ +G
Sbjct: 567 EKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEG 604
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 116/219 (52%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M+ PD++TYN +M ++G++++ L +M P + +++IL++
Sbjct: 491 LFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFC 550
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
A L + MKE G P+++ T++ G RAGNL F + M ++G PD +
Sbjct: 551 SLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCI 610
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I S++ ++A L + M +G LPN+ TYN+++ GF G+ EA ++ +M
Sbjct: 611 TYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKM 670
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G NP+ Y +L++ + + EA V M+++G
Sbjct: 671 IDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRG 709
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 111/254 (43%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T LI + G K + F L + +P +YN ++ + +
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ M P ++++I++ LG + + RL DEM G P T N
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + A + LN M G P + + TL++ + N D + + M +G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P++V Y ++ + G +++A+ + MI KG P+ TY S+I G+ EA
Sbjct: 640 LLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAF 699
Query: 241 TMMKEMESRGCNPN 254
+ EM RG P+
Sbjct: 700 RVHDEMLQRGFVPD 713
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%)
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
V+ F L+ +A L F + +G + ++ + + G ++ A +++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ G + NV+T N M+ C GK D + EME +G + + YNTLV+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 270 KLAEAHEVIRHMVEKG 285
++EA ++ M KG
Sbjct: 274 LVSEAFGLVDCMAGKG 289
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 49/108 (45%)
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
VV + ++I +Y+ A +L + + F + +G ++ N+++ G D A + +
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G N N +V+ L GKL + M EKG Y LV+
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVT 261
>gi|222631078|gb|EEE63210.1| hypothetical protein OsJ_18020 [Oryza sativa Japonica Group]
Length = 975
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 138/325 (42%), Gaps = 50/325 (15%)
Query: 3 ENGFPTTARTFNILICTCGEV-------GLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
E+ P + +FNI++C +V L + ++ K K+ F N ++H L
Sbjct: 434 EDAKPNS-DSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMF-------NDLIHEL 485
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + ++ QM D G P TYN + R LL EM +G P
Sbjct: 486 CNMDRLEEGYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWI 545
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-------- 167
++ L + A+ L+ M ++GF P ++ ++ M+G+ G +D
Sbjct: 546 KNCTEMVQQLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRD 605
Query: 168 -ACKYFF--------------------------DEMANKGCMPDVVCYTVMITSYIAAGE 200
+CKY+ +EM KG P VV Y +MI G
Sbjct: 606 ISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGR 665
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+EKA D M+ + + P V TY S+I GFC AG+ DEA + EM +GC PN + Y
Sbjct: 666 IEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMREKGCAPNNIAYTA 725
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++ LR G++ A MV KG
Sbjct: 726 FINGLRKCGRIETALTYFEEMVTKG 750
Score = 110 bits (274), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 126/251 (50%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +S+N ++ L +++ + + + M G IL +N ++ + +L++ +
Sbjct: 437 KPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEEGYG 496
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+ ++M G +P TYN L + + + P AAL+LL M+ G P + + T ++ L
Sbjct: 497 IFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQQLC 556
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+G + F D M G +PD+V Y+ + GE++ A LF + K LP+V
Sbjct: 557 FSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLPDVV 616
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+N +I GF + K DEA +M+EM +G P+ + YN ++ G++ +A + M
Sbjct: 617 AHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVTYNLMIDVCCKTGRIEKAISYLDKM 676
Query: 282 VEKGKYIHLVS 292
V + K +++
Sbjct: 677 VYEEKQPTVIT 687
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%)
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
E P+ ++NIV+C ++ KLD L +M G +N L+H L D+
Sbjct: 434 EDAKPNSDSFNIVVCGLCKVKKLDMALALTKDMISLGCKGKILMFNDLIHELCNMDRLEE 493
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
+ N MK++G PS + +L G+ R + A EM G P + T M+
Sbjct: 494 GYGIFNQMKDLGLTPSEFTYNSLFYGICRRKDPKAALDLLREMQTNGHPPWIKNCTEMVQ 553
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
+G + +A DGM+ G LP++ TY++ + G C G+ D+A + +++ + P
Sbjct: 554 QLCFSGRVTEAVQFLDGMLQIGFLPDIVTYSAAMNGMCNTGEVDDALHLFRDISCKYYLP 613
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + +N L++ R + KL EA +++ M+EKG + +V+
Sbjct: 614 DVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVT 652
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 15/277 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG P + ++ C G V A + ++ ++ F P +Y+A ++ +
Sbjct: 536 MQTNGHPPWIKNCTEMVQQLCFSGRVTEAVQFLDGMLQ---IGFLPDIVTYSAAMNGMCN 592
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +++ +S + Y PD++ +NI++ + KLD+ ++++EM G P T
Sbjct: 593 TGEVDDALHLFRDISCKYYLPDVVAHNILINGFRKSSKLDEAQKIMEEMLEKGLFPSVVT 652
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+++ V K + A++ L+ M P+V+ +T+L+DG AG D + EM
Sbjct: 653 YNLMIDVCCKTGRIEKAISYLDKMVYEEKQPTVITYTSLIDGFCSAGRPDEAIKLWCEMR 712
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC P+ + YT I G +E A F+ M+TKG + F+ I G
Sbjct: 713 EKGCAPNNIAYTAFINGLRKCGRIETALTYFEEMVTKGFELDTFSLLYFINFLISNGYPM 772
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ C ++KE+ L +T +NL+ G + EA
Sbjct: 773 KGCELLKEV---------LQKDTYGNNLKMVGLINEA 800
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 17/291 (5%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGI-----RQYK 62
T L+ G GL V F ++ F P +YN +L AL Q +
Sbjct: 137 TPGALGFLLRCLGAAGLPDTAVRAFDAARASFGCTPNSYTYNCLLDALAKAGRADDAQAR 196
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L E V + +G +++ C G+ D + + M G+ D H L+
Sbjct: 197 LREMVAR--CGDGSVDKYTLTSLLRC-YCNAGRPDDANDVFQRMSELGWV-DEHVLTTLM 252
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K A+ LL M+ +G S + L+ G ++ G +D F +M + G +
Sbjct: 253 VAFSKWGKVDGAVELLGSMEALGMRLSEKTLSVLVHGFTKQGRVDKAMDMFAKMVSYGFV 312
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
D+ Y+V+I ++ +A LF M + G P+V +I FC G F
Sbjct: 313 VDLAMYSVLIEGLCQQKDIARAVKLFKEMKSSGVAPDVRLLKKVIEAFCREGDFAVIGPF 372
Query: 243 MKE----MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+ E ++S P +YN ++ L + G++ A++++R MV G+ ++
Sbjct: 373 INENAEYLKSGSVVP---LYNVVLEELVHCGEVEAAYQLLRSMVCGGQAVN 420
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 141/293 (48%), Gaps = 15/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLA----RKVVERFIKSKLFNFRPFKNSYNAILH 53
M+E G A T+ ++ C G+ LA RK+ ER IK Y+ I+
Sbjct: 317 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAV-------KYSIIID 369
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L ++ +M +G +I+TYNI++ G+ D +LL +M + +P
Sbjct: 370 GLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINP 429
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
+ T+++L+ K K A L M G P + +T+L+DG + +LD
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
D M +KGC P++ + ++I Y A ++ +LF M +G + + TYN++I+GFC
Sbjct: 490 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 549
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
GK + A + +EM SR PN + Y L+ L + G+ +A E+ +EK K
Sbjct: 550 GKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK-IEKSK 601
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 151/313 (48%), Gaps = 43/313 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWV 67
T +I+I C C ++ LA + + IK + P +++ +++ L L R + +E V
Sbjct: 223 TLSIMINCFCRCRKLCLAFSAMGKIIK---LGYEPNTITFSTLINGLCLEGRVSEALELV 279
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M + G+ PD++T N ++ GK + L+D+M G P+ TY +L+V+ K
Sbjct: 280 -DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCK 338
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM----- 182
+ A+ LL M+E + ++ ++DGL + G+LD F+EM KG
Sbjct: 339 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 398
Query: 183 ------------------------------PDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
P+VV ++V+I S++ G+L +A++L MI
Sbjct: 399 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 458
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G P+ TY S+I GFC D+A M+ M S+GC+PN +N L++ A ++
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 518
Query: 273 EAHEVIRHMVEKG 285
+ E+ R M +G
Sbjct: 519 DGLELFRKMSLRG 531
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+NILI C G K++ IK K+ P +++ ++ + + +
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKI---NPNVVTFSVLIDSFVKEGKL 447
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ E ++++M G APD +TY ++ + LD+ ++++D M G P+ T+NIL
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ K ++ L L M G + + TL+ G G L+ K F EM ++
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 567
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P++V Y +++ GE EKA ++F+ + ++ YN +I G C A K D+A
Sbjct: 568 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 627
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + +G P YN ++ L G L+EA + R M E G
Sbjct: 628 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDG 671
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 39/290 (13%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHA-LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
E FI + N R SY L + L+ I+ I+ +++ M P ++ ++ + A
Sbjct: 139 EDFIARMVANDRNL--SYRERLRSGLVDIKADDAID-LFRDMIHSRPLPTVIDFSRLFSA 195
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+ + D L +M G + + +T +I+++ + K A + + + ++G++P+
Sbjct: 196 IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 255
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ F+TL++GL G + D M G PD++ ++ +G+ +A L D
Sbjct: 256 TITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLID 315
Query: 210 GMITKGQLPNVFTYNS-----------------------------------MIRGFCMAG 234
M+ G PN TY +I G C G
Sbjct: 316 KMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHG 375
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
D A + EME +G N + YN L+ NAG+ + +++R M+++
Sbjct: 376 SLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 425
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 13 FNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
+NI+I C +V A + F L +P +YN ++ L E +++
Sbjct: 609 YNIIIHGMCNASKVDDAWDL---FCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 665
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+M ++G+APD TYNI++ A G + +L++E+ R GFS D T +++ +L
Sbjct: 666 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLS 722
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/208 (19%), Positives = 77/208 (37%), Gaps = 41/208 (19%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N LI C G++ +A+++ + + K+ P +Y +L L +
Sbjct: 531 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV---PPNIVTYKILLDGLCDNGES 587
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +++++ DI YNI++ K+D L + G P TYNI+
Sbjct: 588 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIM 647
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ GL + G L + F +M G
Sbjct: 648 IG-----------------------------------GLCKKGPLSEAELLFRKMEEDGH 672
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFD 209
PD Y ++I +++ G+ K+ L +
Sbjct: 673 APDGWTYNILIRAHLGDGDATKSVKLIE 700
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++E+G + I ++G ++ +E K P YN ++ L ++
Sbjct: 173 IVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKR 232
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K E ++ +M D AP+ +TYN ++ ++G+L++ + + M P T+N
Sbjct: 233 MKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNS 292
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL+ L + A +L M+ GF P +TTL DG + GN+DA +E KG
Sbjct: 293 LLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKG 352
Query: 181 C-MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
+ D C ++++ + G +EKA+++ + G P +N+++ G+C G ++A
Sbjct: 353 VQILDYTC-SILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKA 411
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
T +++ME+ G PN + YN+LV + EA + I+ MVEKG
Sbjct: 412 YTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 135/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A + ER K+ N P ++N++L+ L + + + V
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERM---KVENVEPTIITFNSLLNGLCRAQMMEEAQRVL 310
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M G+ PD TY + + G +D L +E R G +T +ILL+ L K
Sbjct: 311 EEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKE 370
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A +L E G P + F T+++G + G+++ ++M G P+ V Y
Sbjct: 371 GNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTY 430
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + +E+A+ M+ KG LPNV TYN++I G+ + FD +++EME
Sbjct: 431 NSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEK 490
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G PN + Y L++ L + EA ++ MV +G
Sbjct: 491 KGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRG 527
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 130/271 (47%), Gaps = 6/271 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+ENG FN ++ C G++ A +E K + RP +YN+++ +
Sbjct: 384 LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIE---KMEAVGLRPNHVTYNSLVKKFCEM 440
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ + E ++M ++G P++ TYN ++ R D+ ++L+EM + G P+ +Y
Sbjct: 441 KNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISY 500
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L++ L K L A +L M G P+ + L+DG AG L FFDEM
Sbjct: 501 GCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVA 560
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+ +P +V Y ++I G++ +A++L + KG +V TYNS+I G+ AG +
Sbjct: 561 REIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQK 620
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
A + + M+ G P Y+ L++ G
Sbjct: 621 ALELYETMKKSGIKPTLNTYHRLIAGCGKEG 651
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + A +V+++F+++ L P +N I++ + ++M G
Sbjct: 367 LCKEGNMEKAEEVLKKFLENGL---APVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGL 423
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ +TYN ++ + +++ + + +M G P+ TYN L+ G+
Sbjct: 424 RPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQ 483
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+L M++ G P+V+ + L++ L + N+ + +M ++G +P+ Y ++I
Sbjct: 484 ILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSC 543
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
AG+L+ A FD M+ + +P + TYN +I G C GK EA + E+ +G + + +
Sbjct: 544 IAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVI 603
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
YN+L+S +AG + +A E+ M + G
Sbjct: 604 TYNSLISGYSSAGNVQKALELYETMKKSG 632
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 128/297 (43%), Gaps = 5/297 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+N LI G L + + + + +P SY +++ L
Sbjct: 453 MVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDAN 512
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E + M G P+ YN+++ GKL R DEM P TYNI
Sbjct: 513 ILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNI 572
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K K + A NL + + G V+ + +L+ G S AGN+ ++ M G
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P + Y +I G L + ++ M+ +P+ YN++I + G +AC
Sbjct: 633 IKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKAC 691
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRY 297
++ ME++G P+ + YN L+ G++ + ++ M +G L+ K + Y
Sbjct: 692 SLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRG----LIPKTETY 744
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 130/289 (44%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G A+ +N+LI C G++ A + + + ++ P +YN +++ L
Sbjct: 523 MVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV---PTLVTYNILINGLCK 579
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E + +++ +G + D++TYN ++ G + + L + M +SG P +T
Sbjct: 580 KGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNT 639
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ GK L + M ++ P + + L+ G++ M
Sbjct: 640 YHRLIAGCGKEGLVLVE-KIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAME 698
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD + Y +I + G + K ++L + M +G +P TY+ +I G C FD
Sbjct: 699 AQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFD 758
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A +EM G P+ + + L++ LR G+ +A + M KGK
Sbjct: 759 GAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEMNMKGK 807
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y M +G P + + N+ + + + + +L E+ SG PD Y +
Sbjct: 134 LYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAV 193
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ L+ MK G P V + ++ GL + + + FDEM ++ P+ +
Sbjct: 194 KLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRI 253
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I Y G+LE+A ++ + M + P + T+NS++ G C A +EA +++EM
Sbjct: 254 TYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEM 313
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
E G P+ Y TL G + + + V KG I
Sbjct: 314 EVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQI 355
>gi|125548468|gb|EAY94290.1| hypothetical protein OsI_16061 [Oryza sativa Indica Group]
Length = 586
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 2/272 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-RQYKL 63
G+ AR + L+ +C L K+ F R +YN ++ +L+G R + +
Sbjct: 178 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 237
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + + D Y+PD+ ++N+V+ R+G++ + L++ M G SPD T+NI++
Sbjct: 238 VALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVD 297
Query: 124 VLGKGDKPLAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + ++ +L ++ G P+V+ FT+++ G +AG L+ +++M G M
Sbjct: 298 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 357
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ V Y V+I Y G+L A +++ M P+V T++S+I G+C G+ D+A +
Sbjct: 358 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 417
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+M PN ++ ++ +L + EA
Sbjct: 418 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEA 449
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FN++I C G+V A ++VER + F P ++N I+ L + V
Sbjct: 256 SFNVVIKGVCRVGQVQKALELVERMNE---FGCSPDTVTHNIIVDGLCRTNEVSRGHEVL 312
Query: 69 QQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++ +G P+++T+ V+ + GKL+ + ++M SG P+ TYN+L++ GK
Sbjct: 313 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 372
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+A+ + M + P V+ F++L+DG R G LD + +MA P+V
Sbjct: 373 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 432
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
++++I S ++A L + + + + P F YN +I C GK DEA + K M
Sbjct: 433 FSIIIHSLCKQNRSDEAICLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 492
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E +GC P+ Y L+ +++EA MVE G
Sbjct: 493 EEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAG 531
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 59 RQYKLIEWVYQQMSDEGYAPD--ILTYNIVMC--------AKYRLGKLDQF--------- 99
RQ ++ Q + GY+PD L++ + C + L K +F
Sbjct: 162 RQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAY 221
Query: 100 HRLLDEMGRSG-----------------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
++L+ + G +SPD ++N+++ + + + AL L+ M
Sbjct: 222 NKLMSSLIGRGRVHDVVALFERWIQDRVYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 281
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGEL 201
E G P + ++DGL R + + G CMP+VV +T +I+ Y AG+L
Sbjct: 282 EFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKL 341
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A +++ M+ G +PN TYN +I G+ G A + ++M C P+ + +++L
Sbjct: 342 EDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL 401
Query: 262 VSNLRNAGKLAEAHEVIRHMVE 283
+ G+L +A + M +
Sbjct: 402 IDGYCRCGQLDDALRIWSDMAQ 423
>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 9/302 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGIRQ 60
++GF + LI C G R+ V F K + +P +YN IL + +G+
Sbjct: 26 KDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGM-P 84
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ I+ +++ M + G PD TYN ++ R ++ + +M GF PD TYN
Sbjct: 85 WNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNA 144
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V GK + A+ +L M+ G PS++ + +L+ +R G L ++M G
Sbjct: 145 LLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGG 204
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
DV YT +++ ++ AG+ E A +F M G PN+ T+N++I+ GKF E
Sbjct: 205 INLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMM 264
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM------VEKGKYIHLVSKF 294
+ +E+++ C P+ + +NTL++ G +E V + M E+ Y L+S +
Sbjct: 265 KVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAY 324
Query: 295 KR 296
R
Sbjct: 325 SR 326
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI C L + F K F P K +YNA+L R+ K V ++M
Sbjct: 106 TYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREM 165
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +P I+TYN ++ A R G L + L ++M G + D TY LL + K
Sbjct: 166 EVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKD 225
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+A+ + M+ G P++ F L+ G F+E+ N C+PD+V + +
Sbjct: 226 ESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTL 285
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ + G + +F M G +P TYN++I + G FD+A + K M G
Sbjct: 286 LAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGI 345
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
P+ YN +++ L G ++ ++ M
Sbjct: 346 TPDLSTYNAVLAALARGGLWEQSEKIFAEM 375
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLA-RKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
M E G T T+N+++ G++G+ K+ F K P + +YN ++
Sbjct: 59 MEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGS 118
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++ V++ M G+ PD +TYN ++ + + + +L EM +G SP TYN
Sbjct: 119 LHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYN 178
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ + A+ L N M E G + V +TTL+ G RAG ++ F EM
Sbjct: 179 SLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAA 238
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ + +I + G+ + +F+ + +P++ T+N+++ F G E
Sbjct: 239 GCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEV 298
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G P YNTL+S G +A ++ + M+E G
Sbjct: 299 SGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAG 344
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 123/262 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+N ++ GL + + F + K +P + +Y ++LHA ++
Sbjct: 340 MLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKE 399
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +++ P + ++ + L + E+ R GFSPD T N
Sbjct: 400 IGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNA 459
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L + G+ +LN M E GF PS+ + +LM SR+ N + + E+ KG
Sbjct: 460 MLSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKG 519
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD + Y +I +Y G +++A +F M G +P+V TYN+ + + F++A
Sbjct: 520 IKPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAI 579
Query: 241 TMMKEMESRGCNPNFLVYNTLV 262
+++ M GC PN YN++V
Sbjct: 580 DVVRYMIKHGCKPNQNTYNSVV 601
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ G+ G+ +V F + K F P +++YN ++ A + +Y++M
Sbjct: 281 TWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRM 340
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G PD+ TYN V+ A R G +Q ++ EM P+ TY LLH G +
Sbjct: 341 LEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEI 400
Query: 132 ---------------------LAALNLLN--------------HMKEVGFDPSVLHFTTL 156
L L L+N +K GF P + +
Sbjct: 401 GRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAM 460
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ R + M G P + Y ++ + + E+++++ ++ KG
Sbjct: 461 LSIYGRRQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGI 520
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+ +YN++I +C G+ EA + EM G P+ + YNT V++ +A +
Sbjct: 521 KPDTISYNTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAID 580
Query: 277 VIRHMVEKG 285
V+R+M++ G
Sbjct: 581 VVRYMIKHG 589
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
GK+ LL+++ + GF D + Y L+ + A+ + M+E G P+++ +
Sbjct: 12 GKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITY 71
Query: 154 TTLMDGLSRAG-NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+++ + G + K F+ M N G +PD Y +IT E+A +F M
Sbjct: 72 NVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMK 131
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ G +P+ TYN+++ + + + EA +++EME GC+P+ + YN+L+S G L
Sbjct: 132 SMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLK 191
Query: 273 EAHEVIRHMVEKG------KYIHLVSKFKR 296
EA E+ MVE G Y L+S F R
Sbjct: 192 EAMELKNQMVEGGINLDVFTYTTLLSGFVR 221
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 120/286 (41%), Gaps = 8/286 (2%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKL----FNFRPFKNSYNAILHALLGIR 59
NG + T+N LI GL ++ +E +K+++ N F +Y +L +
Sbjct: 168 NGCSPSIVTYNSLISAYARDGLLKEAME--LKNQMVEGGINLDVF--TYTTLLSGFVRAG 223
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ + V+ +M G P+I T+N ++ GK + ++ +E+ S PD T+N
Sbjct: 224 KDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWN 283
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
LL V G+ + MK GF P + TL+ SR G+ D + M
Sbjct: 284 TLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEA 343
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD+ Y ++ + G E+++ +F M PN TY S++ + +
Sbjct: 344 GITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRM 403
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ S P+ ++ TLV L EA + KG
Sbjct: 404 LALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKG 449
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 133/309 (43%), Gaps = 35/309 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI G G ++++ F + K P ++N +L + V+++M
Sbjct: 246 TFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 305
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD-- 129
G+ P+ TYN ++ A R G DQ + M +G +PD TYN +L L +G
Sbjct: 306 KRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLW 365
Query: 130 ---------------KP--LAALNLLN---HMKEVG-------------FDPSVLHFTTL 156
KP L +LL+ + KE+G +P + TL
Sbjct: 366 EQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTL 425
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ S+ L + F E+ KG PD+ M++ Y K ++ + M G
Sbjct: 426 VLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNFMNESGF 485
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P++ TYNS++ + F+ + ++KE+ ++G P+ + YNT++ G++ EA
Sbjct: 486 TPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKEASR 545
Query: 277 VIRHMVEKG 285
+ M E G
Sbjct: 546 IFSEMRESG 554
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 142/301 (47%), Gaps = 45/301 (14%)
Query: 27 RKVVERFIKSKLFN------FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
R+V E F LF+ P +YN+++HAL + ++K + + +M D PD+
Sbjct: 182 RQVTEAF---NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDV 238
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEM-GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+++N V+ A + GK+ + H ++D+M R G P+ +YN L++ K + A+ L
Sbjct: 239 VSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFG 298
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI-----TS 194
M P + ++TL+ GL L F EM +P++V Y +++
Sbjct: 299 EMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNR 358
Query: 195 YIA------------------------------AGELEKAQDLFDGMITKGQLPNVFTYN 224
Y+A AGELE A+DLF + +KG P+V+TY+
Sbjct: 359 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 418
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
MI G C G DEA + +EM+ GC N +YNT+ + + A ++++ MV +
Sbjct: 419 IMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVAR 478
Query: 285 G 285
G
Sbjct: 479 G 479
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV---LGKGDKPLAA 134
P + +N ++ + ++ L +M G P+ +T +IL++ L +G K A
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRG-KIGEA 117
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L+L + M GF P V+ + TL++GL + GN A M K C P+V Y +I S
Sbjct: 118 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 177
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
++ +A +LF M+TKG P++FTYNS+I C ++ T++ EM P+
Sbjct: 178 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 237
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +NT+V L GK+ EAH+V+ M+++G
Sbjct: 238 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 268
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 138/289 (47%), Gaps = 3/289 (1%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + FN L+ + ++ ++ + F P + + ++++ + + K+ E
Sbjct: 58 PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEA 117
Query: 67 V--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ + +M EG+ PD++TY ++ ++G RLL M + P+ YN ++
Sbjct: 118 LHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 177
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K + A NL + M G P + + +L+ L +EM + MPD
Sbjct: 178 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 237
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQ-LPNVFTYNSMIRGFCMAGKFDEACTMM 243
VV + ++ + G++ +A D+ D MI +G +PNV +YN++I G+C + D+A +
Sbjct: 238 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLF 297
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
EM + P+ + Y+TL+ L + +L +A + MV + +LV+
Sbjct: 298 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 346
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 5/292 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++ +FN ++ C G+V A VV++ I+ P SYN +++
Sbjct: 229 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG--GCMPNVISYNTLINGYCK 286
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I++ +++ +M + PD +TY+ ++ + +L L EM P+ T
Sbjct: 287 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 346
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ILL L K A+ LL ++ DP + +DG+ RAG L+A + F ++
Sbjct: 347 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLS 406
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KG PDV Y++MI G L++A LF M G N YN++ RGF +
Sbjct: 407 SKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETS 466
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
A +++EM +RG + + V L + G +++R ++ +I+
Sbjct: 467 RAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFCKQKSWIY 518
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 76/155 (49%), Gaps = 2/155 (1%)
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A++ N M + PS + F L+ +++ + +M + G P++ ++I
Sbjct: 44 GAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILI 103
Query: 193 TSY--IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
S+ + G++ +A LFD MI +G P+V TY ++I G C G A ++ M +
Sbjct: 104 NSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN 163
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C PN YNT++ +L ++ EA + MV KG
Sbjct: 164 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKG 198
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 15/155 (9%)
Query: 135 LNLLNHMKEVG---FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L+LL H + F LHF T+ +S F+ M P V + +
Sbjct: 18 LSLLAHFLSLSHNRFHSKSLHFNTIDGAISS----------FNRMLRMQPPPSTVDFNKL 67
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM--AGKFDEACTMMKEMESR 249
+TS L M + G PN++T + +I FC GK EA + +M
Sbjct: 68 LTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGE 127
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + Y TL++ L G + A ++ MV+K
Sbjct: 128 GFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK 162
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 142/290 (48%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ G + T+ L+ C E + V++ I+ F P + + ++++ L
Sbjct: 287 LIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIE---LGFVPTEAALSSLVEGLR- 342
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R+ K+++ + ++ G P + YN ++ + + GK D+ L EMG G +
Sbjct: 343 -RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCAND 401
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+IL+ + K A++ L M G +V + +L++G + GNL A FFDE
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +KG P VV YT +I+ Y G+L +A L+ M KG PN +T+ ++I A +
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + EM + PN + YN ++ G +A E++ MV+KG
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 10/283 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARK--VVERFI---KSKLFNFRPFKNSYNAILHAL 55
MIE GF T + L+ GL RK VV+ F + K P YNA++++L
Sbjct: 322 MIELGFVPTEAALSSLV-----EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSL 376
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ E ++++M ++G + +TY+I++ + R GKLD L +M +G
Sbjct: 377 CKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITV 436
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ YN L++ K AA++ + M + G P+V+ +T+L+ G G L + E
Sbjct: 437 YPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHE 496
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M KG P+ +T +I++ A + A LFD M+ + +PN TYN MI G C G
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+A ++ +M +G P+ Y L+S+L + G++ EA + I
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFI 599
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 133/296 (44%), Gaps = 9/296 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLG- 57
M G TF LI F + N P + +YN ++ H G
Sbjct: 497 MTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Query: 58 -IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
++ ++L+ QM +G PD TY ++ + G++ + + +D++ R F +
Sbjct: 557 TVKAFELL----NQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM 612
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y+ LLH K + AL + M + G D ++ + L+DG + + A M
Sbjct: 613 CYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNM 672
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++ PD V YT MI Y AG ++KA ++D MI +G PN+ TY ++I C AG
Sbjct: 673 HDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLM 732
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
D+A + KEM PN + Y + +L G + +A ++ M+ KG + VS
Sbjct: 733 DKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVS 787
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 125/320 (39%), Gaps = 41/320 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G T +N LI C G + A + I L +P SY +++
Sbjct: 427 MIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGL---KPTVVSYTSLISGYCN 483
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M+ +G AP+ T+ ++ A +R ++ RL DEM P+ T
Sbjct: 484 KGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVT 543
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD--- 174
YN+++ K + A LLN M + G P + L+ L G + K F D
Sbjct: 544 YNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603
Query: 175 --------------------------------EMANKGCMPDVVCYTVMITSYIAAGELE 202
EM +G D+VCY V+I I +
Sbjct: 604 REHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTS 663
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
L M + P+ Y SMI G+ AG +A + M GC PN + Y TL+
Sbjct: 664 AVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLI 723
Query: 263 SNLRNAGKLAEAHEVIRHMV 282
+ L AG + +A + + M+
Sbjct: 724 NELCKAGLMDKAELLWKEML 743
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 1/221 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
RP K Y +++ K ++ M DEG P+I+TY ++ + G +D+
Sbjct: 677 LRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAE 736
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L EM S +P+ TY L L + A+ L N M + G + + + L+ G
Sbjct: 737 LLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGF 795
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G ++ DEM + PD + Y+ +I G L+ A + +D M+ KG P+
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDT 855
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
YN +I G C+AG+ +A + +M RG PN + +L
Sbjct: 856 LAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSL 896
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 112/243 (46%), Gaps = 2/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +L+ L IR+ ++ ++ ++ G PDI Y V+ + L + +
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M S + YN+L+H L K + A+ + N + + G S + + TL+ GL +
Sbjct: 251 IQRMESSDL--NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ DEM G +P + ++ G++ A DL + + G +P++F
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I C GKFDEA + KEM +G N + Y+ L+ + GKL A + M+
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428
Query: 283 EKG 285
G
Sbjct: 429 MAG 431
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 42/323 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T+ LI C+ G V A+K ++ + +F+ + Y+A+LH
Sbjct: 567 MVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE---HFKLNEMCYSALLHGYCK 623
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V ++M G D++ Y +++ + LL M PD
Sbjct: 624 EGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVI 683
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ K A + + M + G P+++ +TTL++ L +AG +D + + EM
Sbjct: 684 YTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEML 743
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
P+ V Y + G +EKA L + M+ KG L N +YN ++RGFC G+ +
Sbjct: 744 VSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVE 802
Query: 238 EACTMMKEM-----------------------------------ESRGCNPNFLVYNTLV 262
EA ++ EM ++G P+ L YN L+
Sbjct: 803 EATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLI 862
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
AG+L +A E+ M+ +G
Sbjct: 863 YGCCIAGELGKAFELRDDMIRRG 885
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 124/266 (46%), Gaps = 8/266 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALL 56
M E G T++ILI C G++ A + + I + + P YN++++
Sbjct: 392 MGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYP----YNSLINGHC 447
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +M D+G P +++Y ++ GKL + RL EM G +P+ +
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTY 507
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T+ L+ L + ++ A L + M E P+ + + +++G + GN ++M
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
KG +PD Y +I+S + G + +A+ D + + N Y++++ G+C G+
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRL 627
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLV 262
+A + +EM RG + + + Y L+
Sbjct: 628 RDALGVCREMVKRGVDMDLVCYAVLI 653
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 34/220 (15%)
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
F LLD + F +++L+ + + ++ + M++ P V +++
Sbjct: 143 FEALLDCFEKCDFISSL-GFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLN 201
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF---------- 208
GL++ +D F E+ + G PD+ Y +I S+ KA+++
Sbjct: 202 GLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNV 261
Query: 209 -----------------------DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+G+I KG + TY +++ G C +F+ +M E
Sbjct: 262 VVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDE 321
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M G P ++LV LR GK+ +A +++ + + G
Sbjct: 322 MIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG 361
>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 323
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 146/294 (49%), Gaps = 13/294 (4%)
Query: 1 MIENGFPTTARTFNILICTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
M+E G N L C G+ + L K+ E IK+ + YNAI+ L
Sbjct: 36 MVEEGHQPYGTIINGL-CKMGDTESALNLLSKMEETHIKAHVV-------IYNAIIDRLC 87
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + ++ +M D+G PD++TY+ ++ + R G+ +LL +M +PD
Sbjct: 88 KDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVV 147
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
T++ L++ L K K A + M G P+ + + +++DG + L+ K D M
Sbjct: 148 TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
A+K C PDVV ++ +I Y A ++ ++F M +G + N TY ++I GFC G
Sbjct: 208 ASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 267
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
D A ++ M S G PN++ + +++++L + +L +A ++ + +K + HL
Sbjct: 268 DAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL-QKSEGHHL 320
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 39/257 (15%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M + G PD++T+ +M G++ Q L+D M G P Y +++ L K
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
+ALNLL+ M+E V+ + ++D L + G+ + F EM +KG PDV+ Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 191 MITSY-----------------------------------IAAGELEKAQDLFDGMITKG 215
MI S+ + G++ +A++++ M+ +G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P TYNSMI GFC + ++A M+ M S+ C+P+ + ++TL++ A ++
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 276 EVIRHMVEKGKYIHLVS 292
E+ M +G + V+
Sbjct: 237 EIFCEMHRRGIVANTVT 253
>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 376
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 119/222 (53%), Gaps = 3/222 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E VY++M++ +PD + YN ++ +R G++ L + MGR S + ++NI++
Sbjct: 10 ERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGRE-XSQNVVSFNIMMRG 68
Query: 125 L-GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L G GD A+++ M + GF + L+DG + G ++ + KG +
Sbjct: 69 LFGNGDVD-KAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVL 127
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D Y+ MI +L++A + +GMI G PN YN++I GF KFD+A +
Sbjct: 128 DAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVF 187
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM S C+P + YNTL++ L + AEA+++++ M+EKG
Sbjct: 188 REMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKG 229
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A +V + +SK+ P YNA+L+ + K +++ M E +
Sbjct: 1 CESGDIDGAERVYKEMAESKV---SPDAVVYNAMLNGFFRAGRIKDCIELWELMGRE-XS 56
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+++++NI+M + G +D+ + + M +SGF D TY IL+ K +L +
Sbjct: 57 QNVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRV 116
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L +E G ++ +++GL + LD + M G P+ Y +I ++
Sbjct: 117 LEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMG 176
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ + A +F M + P V TYN++I G C +F EA ++KEM +G P +
Sbjct: 177 VSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVIT 236
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y+ L+ L K+ A ++ ++ G
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVISNG 264
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 134/279 (48%), Gaps = 10/279 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++GF + T+ IL+ C G + + +V+E + K F +Y+A+++ L
Sbjct: 85 MTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLE-IAEEKGGVLDAF--AYSAMINGLC- 140
Query: 58 IRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ KL E V M G P+ YN ++ + K D R+ EMG + SP
Sbjct: 141 -KEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTV 199
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L++ L KG++ A +L+ M E G+ P V+ ++ LM GL + ++ +++
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQ 259
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ + G PDV ++I + G+ + A L+ M PN+ T+N+++ GF G
Sbjct: 260 VISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGD 319
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A + + G P+ + YN + L + +++ A
Sbjct: 320 IRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFA 358
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 104/224 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
S+N ++ L G +++ M+ G+ D TY I++ + G +++ R+L+
Sbjct: 61 SFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIA 120
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G D Y+ +++ L K K A+++LN M + G P+ + TL++G
Sbjct: 121 EEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKF 180
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D F EM + C P VV Y +I +A DL M+ KG P V TY+ +
Sbjct: 181 DDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLL 240
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
++G C K + A + ++ S G P+ + N L+ L + GK
Sbjct: 241 MKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGK 284
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V + ++G D Y+ ++ + KLD+ +L+ M ++G +P+ H YN L++
Sbjct: 116 VLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFM 175
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A+ + M P+V+ + TL++GL + EM KG P V+
Sbjct: 176 GVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVI 235
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++++ ++E A L++ +I+ G P+V N +I G C GK A + +M
Sbjct: 236 TYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDM 295
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
C PN + +NTL+ G + A + ++ G +VS
Sbjct: 296 NRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVS 341
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 101/214 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + YN +++ +G+ ++ V+++M +P ++TYN ++ + + + + L
Sbjct: 162 PNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDL 221
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ EM G+ P TY++L+ L +G K AL L N + G P V L+ GL
Sbjct: 222 VKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCS 281
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + +M C P++V + ++ + G++ A ++ ++ G P++ +
Sbjct: 282 VGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVS 341
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
YN ++G C + A +++ ++ P+ +
Sbjct: 342 YNITLKGLCSCSRISFAILFLQDALAKKIAPSII 375
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 4/224 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLAR--KVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
MI+NG A +N LI G +G+++ + F + N P +YN +++ L
Sbjct: 155 MIKNGGTPNAHVYNTLIN--GFMGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKG 212
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++ + ++M ++G+ P ++TY+++M + K++ +L +++ +G PD
Sbjct: 213 ERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQML 272
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL+H L K AL L M P+++ TLM+G + G++ + +
Sbjct: 273 NILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILR 332
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G PD+V Y + + + + A + K P++ T
Sbjct: 333 NGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376
>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
Length = 768
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 146/339 (43%), Gaps = 73/339 (21%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C V A+ V + I + RP ++Y ++H L ++K + + Q+MS G
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGV---RPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGL 268
Query: 77 APDILTYNIVM--------CAKYR---------------------------LGKLDQFHR 101
PD + Y +++ C + R G L + H
Sbjct: 269 QPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHS 328
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LD M R+G SPD H +NI+ + K A+++ + M++ P V+++ L+D L
Sbjct: 329 FLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALC 388
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF------------- 208
+ G +D F++M N+G PD+ ++ ++ + EKA+ LF
Sbjct: 389 KLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAA 448
Query: 209 -----------DGMITKGQ-----------LPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+G + + Q P+V +YN+++ G C+ G+ DEA ++ M
Sbjct: 449 FFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVM 508
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
S G P+ YNTL+ A ++ +A+ + R M+ KG
Sbjct: 509 VSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKG 547
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 110/216 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M + +P ++ Y ++ A +LG++D ++M G +PD ++ L++ L
Sbjct: 364 IFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLC 423
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK A L + + G + F LM L R G + + D M PDV+
Sbjct: 424 TVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVI 483
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ + G +++A L D M++ G P+ FTYN+++ G+C A + D+A ++ +EM
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREM 543
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+G P + YNT++ L G+ EA E+ +M+
Sbjct: 544 LMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMI 579
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 109/243 (44%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y ++ L + + V+Q M D+G P+ TY ++ GK + ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L EM G PD Y +LL L K + A N+ + + G P V + L+ G +
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L F D M G PD + +M +Y +++A +FD M + P V
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C G+ D+A +M + G P+ V+++LV L K +A ++ ++
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVL 439
Query: 283 EKG 285
++G
Sbjct: 440 DQG 442
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 126/284 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG FNI+ + + + + F K + P +Y A++ AL + +
Sbjct: 333 MVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGR 392
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ QM +EG PDI ++ ++ + K ++ +L E+ G + +NI
Sbjct: 393 VDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNI 452
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + + + A L++ M V P V+ + TL+DG G +D D M + G
Sbjct: 453 LMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIG 512
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD Y ++ Y A ++ A LF M+ KG P V TYN+++ G G+F EA
Sbjct: 513 LKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAK 572
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ M + + Y +++ L + EA ++ + + K
Sbjct: 573 ELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
PD+++YN ++ G++D+ +LLD M G PD TYN LLH K + A +L
Sbjct: 480 PDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSL 539
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
M G P V+ + T++ GL + G K + M N D+ YT+++
Sbjct: 540 FREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCR 599
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+++A +F + +K ++FT N MI G+ ++A + + + G P+
Sbjct: 600 NNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVET 659
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y + NL G L E E+ M E G
Sbjct: 660 YRLIAENLIKEGSLEELDELFSAMEENG 687
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 3/242 (1%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEG---YAPDILTYNIVMCAKYRLGKLDQFHRLL 103
SYN +L L ++ + + M+D+G + P+++TY V+ + +D+ +
Sbjct: 166 SYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVF 225
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
M G P+ HTY L+H K + +L M G P + + L+D L +
Sbjct: 226 QHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKN 285
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G + FD + KG P V Y +++ Y G L + D M+ G P+ +
Sbjct: 286 GRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIF 345
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N M + DEA + +M + +P + Y L+ L G++ +A M+
Sbjct: 346 NIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMIN 405
Query: 284 KG 285
+G
Sbjct: 406 EG 407
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 102/220 (46%), Gaps = 5/220 (2%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT-YNILLHVLGKGDKPLAAL 135
AP TY I++ R+G+L + ++G+S + + LL L + A
Sbjct: 89 APSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEAT 148
Query: 136 N-LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC---MPDVVCYTVM 191
+ LL M E G +V+ + L+ GL + MA+ G P+VV YT +
Sbjct: 149 DILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTV 208
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I A +++A+ +F MI KG PN TY +I G+ GK+ E M++EM + G
Sbjct: 209 IDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGL 268
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
P+ ++Y L+ L G+ EA + ++ KG H+
Sbjct: 269 QPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVT 308
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/279 (20%), Positives = 123/279 (44%), Gaps = 10/279 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++N L+ C G + A K+++ + +P + +YN +LH R+ ++
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVMVS---IGLKPDEFTYNTLLHGYCKARRIDDAYSLF 540
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M +G P ++TYN ++ +++G+ + L M + D +TY I+L+ L +
Sbjct: 541 REMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRN 600
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + + + ++ L + G + F ++ G +PDV Y
Sbjct: 601 NFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETY 660
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ + I G LE+ +LF M G PN N+++R G A + +++
Sbjct: 661 RLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDE 720
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ NF + + S L + AE ++ + + EK ++
Sbjct: 721 K----NFSLEASTTSMLISIYSRAEYQQLAKSLPEKYRF 755
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 66 WV-YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
W Y+++ D GY PD+ +N++M + K+++ L E+G+ G P ++N L++
Sbjct: 210 WAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLING 269
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K L M E P V ++ L++GL + G LD F EM ++G +P+
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V +T +I + G + +++ M+ KG P+V TYN++I G C G EA ++
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
EM RG P+ Y L+ G L A E+ + MV++G + L+S F R
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+ P +N ++H L + + ++ ++ G P ++++N ++ + G LDQ
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
RL M + PD TY++L++ L K + A L M + G P+ + FTTL++G
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G D + +M KG PDV+ Y +I G+L +A+ L M +G P+
Sbjct: 341 CVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
FTY +I G C G + A + KEM G + + + L+S G++ EA +R
Sbjct: 401 FTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLRE 460
Query: 281 MVEKG 285
M+E G
Sbjct: 461 MLEAG 465
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+ G T +FN LI C G + ++ +++++F P +Y+ +++ L
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVFTYSVLINGLCKEG 309
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q ++ +M D G P+ +T+ ++ G+ D + +M R G PD TYN
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L++ L K A L+ M + G P +T L+DG + G+L++ EM +
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G D V +T +I+ + G++ +A+ M+ G P+ TY +I GFC G
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+ G P + YN L++ L G++ A+ ++ M+ G
Sbjct: 490 FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 138/309 (44%), Gaps = 23/309 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKV----VERFIKSKLFNFRPFKNSYNAILH 53
M+EN T+++LI C G++ A K+ +R + F N +
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A LG+ +YQQM +G PD++TYN ++ ++G L + +L+ EM + G P
Sbjct: 346 ADLGME-------IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TY +L+ K +AL + M + G + + FT L+ G R G + +
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM G PD YT++I + G+++ L M G +P V TYN ++ G C
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVS------NLRNAGKLAEAHEVIRHMVEKGKY 287
G+ A ++ M + G P+ + YN L+ N + KL +++ + G Y
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSEKGLVQ---DYGSY 575
Query: 288 IHLVSKFKR 296
L+ ++
Sbjct: 576 TSLIGDLRK 584
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 23/248 (9%)
Query: 42 RPFKNSYNAILHALL---GIRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLD 97
R KNS +++ ++L G Q L+ V +D GY D +
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAI---------------- 175
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
Q RL+ + FH+ L L K + A + + G+ P V F LM
Sbjct: 176 QCFRLVR---KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLM 232
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
L + ++ + F E+ +G P VV + +I Y +G L++ L M+
Sbjct: 233 HRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF 292
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+VFTY+ +I G C G+ D+A + EM RG PN + + TL++ G+ E+
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352
Query: 278 IRHMVEKG 285
+ M+ KG
Sbjct: 353 YQQMLRKG 360
>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
Length = 864
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 12/284 (4%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKS-----KLFNFRPFKNSYNAILHALLGIRQYKL 63
T NIL+ C G V V++ I N P +Y ++ A +Q+ L
Sbjct: 115 TCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAY--CKQHGL 172
Query: 64 IEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
E + Y++M +G+ PD++TY+ ++ + G L + LL EM + G +P+ Y IL
Sbjct: 173 SEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAIL 232
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + + M G ++ TTL+DGL +AG D + F +A C
Sbjct: 233 VDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNC 292
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P+ + YT MI Y G+++ A+ L M K +PNV TY+S+I G+ G D A
Sbjct: 293 IPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVR 352
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+MK+M + PN +Y TL+ AGK A ++ M G
Sbjct: 353 IMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNG 396
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 125/281 (44%), Gaps = 12/281 (4%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
L+ C + A +++ + + + YN+++ L G+ K V M+ EG
Sbjct: 581 LLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEG 640
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
+ D +TYN ++ ++ +++ +M G SP TYN+LL L A
Sbjct: 641 ISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAY 700
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+L+ MK+ G DP + TL+ G + GN F+ EM KG +P Y V+I +
Sbjct: 701 EILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDF 760
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK------------FDEACTMM 243
G++++A++L + M + PN TY+ +I G+C K EA T+
Sbjct: 761 AKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLF 820
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
EM +G P + S G + +A +++ M ++
Sbjct: 821 AEMNEKGFVPCENTLACISSTFARPGMVVDAKHMLKDMYKR 861
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 133/314 (42%), Gaps = 41/314 (13%)
Query: 12 TFNILICTC-----GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
+F++++CT + G + + F N P +Y A++ + E
Sbjct: 258 SFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAES 317
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ + M + P+++TY+ ++ + G LD R++ +M P+ + Y L+
Sbjct: 318 LLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHL 377
Query: 127 KGDKPLAALNLLNHMKEVGFDPSV-----------------------------------L 151
K K AA++L N MK G + + +
Sbjct: 378 KAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRV 437
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
++T+LMDG + G A ++MA G DVV Y V+I + G+ + A+ ++ G+
Sbjct: 438 NYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGI 496
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G P+ TYN+MI +C GK + A + EM+ PN + N LV L AG+
Sbjct: 497 RELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGET 556
Query: 272 AEAHEVIRHMVEKG 285
A +V+ M+ G
Sbjct: 557 ERAIDVLNEMLLWG 570
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 123/261 (47%), Gaps = 8/261 (3%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
+A K+ E IK + +YN +++ LL + +Y E VY + + G APD TYN
Sbjct: 458 MAEKMAETGIKFDVV-------AYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYN 509
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
++ A + GKL+ +L +EM P+ T NIL+ L K + A+++LN M
Sbjct: 510 TMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLW 569
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G P+V L++ S+ D + G + Y +IT G ++A
Sbjct: 570 GICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRA 629
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ + M +G + TYN++I G + ++A +M + G +P YN L+
Sbjct: 630 TLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGG 689
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L AG +++A+E++ M + G
Sbjct: 690 LLAAGLMSKAYEILSKMKDSG 710
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 110/237 (46%), Gaps = 16/237 (6%)
Query: 66 W-VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
W +Y +M G P++ T+NI++ A ++G L LD + D TYN +
Sbjct: 31 WDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLS---LALDLIRNVDIDVDTVTYNTAIWG 87
Query: 125 LGKGDKPLAALNLLNHM--KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM------ 176
+ L+ M K+ FD + L+ G R G++ ++ D +
Sbjct: 88 FCQQGLANQGFGFLSIMVKKDTFFDSFTCNI--LVKGFCRIGSVKYGEWVMDNLIDDMND 145
Query: 177 --ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
P++V YT +I++Y L +A L++ MI+ G LP+V TY+S+I G C G
Sbjct: 146 DDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRG 205
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
EA +++EM+ G NPN +VY LV +L AG E+ M+ G LV
Sbjct: 206 MLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLV 262
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 116/268 (43%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T NIL+ + G + ++ + L+ P + A+L+A + I +++++
Sbjct: 542 TCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRL 601
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G + YN ++ LG + +L+ M + G S D TYN L+H K
Sbjct: 602 VGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHI 661
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL M G P + + L+ GL AG + +M + G PD Y +
Sbjct: 662 EKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTL 721
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I+ + G ++A + M+TKG +P TYN +I F GK D+A ++ EM+ R
Sbjct: 722 ISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRV 781
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
PN Y+ L+ N K E + +
Sbjct: 782 PPNSSTYDILICGWCNLSKQPELDRISK 809
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 135/297 (45%), Gaps = 10/297 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +GF T++ +I GL ++ + K+ L + N +++A+L
Sbjct: 182 MISDGFLPDVVTYSSIIN-----GLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSL 236
Query: 61 YKL-IEW---VYQ-QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+K W +YQ QM G + D++ ++ ++ GK D+ + + + P+
Sbjct: 237 FKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNN 296
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY ++ K A +LL M++ P+V+ ++++++G ++ G LD +
Sbjct: 297 ITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKK 356
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M ++ MP+ Y +I ++ AG+ + A DL++ M G N F ++ I K
Sbjct: 357 MLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRK 416
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+EA + K M S+G + + Y +L+ G+ + A + M E G +V+
Sbjct: 417 MEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVA 473
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P + + +I + A G + + DL+ M++ G LPNVFT+N ++ +C G A
Sbjct: 8 VPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALD 67
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+++ ++ + + + YNT + G + + MV+K +
Sbjct: 68 LIRNVD---IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTF 110
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 11/181 (6%)
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P +N L++ +L + M G P+V L+ + G+L
Sbjct: 9 PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLA--- 65
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
D + N D V Y I + G + M+ K + FT N +++GFC
Sbjct: 66 LDLIRNVDIDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCR 125
Query: 233 AG--KFDEAC--TMMKEME----SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G K+ E ++ +M + PN + Y TL+S L+EA + M+
Sbjct: 126 IGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISD 185
Query: 285 G 285
G
Sbjct: 186 G 186
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 12/125 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G A +N LI G++G ++ ++ + + P ++YN ++ + +
Sbjct: 706 MKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGK 765
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR------------LLDEMGR 108
+ +M P+ TY+I++C L K + R L EM
Sbjct: 766 MDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPELDRISKKTYRTEARTLFAEMNE 825
Query: 109 SGFSP 113
GF P
Sbjct: 826 KGFVP 830
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 126/243 (51%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P YN ++ L + + M +G P+ +TYN ++ GKLD+ L
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M S P+ TY L++ L K + A+ LL+ M+E G+ + ++ L+ GL +
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + + +MA KGC P++V Y+V++ G+ +A+++ + MI G LPN +T
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+S+++GF G +EA + KEM+ GC+ N Y+ L+ L G++ EA V M+
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 283 EKG 285
G
Sbjct: 495 TIG 497
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 139/285 (48%), Gaps = 2/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+IE F R + V L ++V+ F + + + F + N I++ L R
Sbjct: 110 IIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKR--SVKSFNSVLNVIINEGLYHRG 167
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++V + +P+ L++N+V+ A +L +D+ + M PD +TY
Sbjct: 168 LEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCT 227
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K ++ A+ LL+ M+ G PS + + L+DGL + G+L D M KG
Sbjct: 228 LMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKG 287
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P+ V Y +I G+L+KA L + M++ +PN TY ++I G + +A
Sbjct: 288 CVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV 347
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ ME RG + N +Y+ L+S L GK EA + R M EKG
Sbjct: 348 RLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKG 392
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 115/247 (46%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
N P S+N ++ AL +R V++ M + PD TY +M + ++D+
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
LLDEM G SP YN+L+ L K L+++M G P+ + + TL+
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIH 300
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
GL G LD + M + C+P+ V Y +I + A L M +G
Sbjct: 301 GLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
N Y+ +I G GK +EA ++ ++M +GC PN +VY+ LV L GK EA E++
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 279 RHMVEKG 285
M+ G
Sbjct: 421 NRMIASG 427
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 94/179 (52%)
Query: 111 FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
SP+ ++N+++ L K A+ + M E P + TLMDGL + +D
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
DEM ++GC P V Y V+I G+L + L D M KG +PN TYN++I G
Sbjct: 243 LLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGL 302
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
C+ GK D+A ++++ M S C PN + Y TL++ L + +A ++ M E+G +++
Sbjct: 303 CLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLN 361
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 134/286 (46%), Gaps = 8/286 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVER-FIKSKLFNFRPFKNSYNAILHALL 56
M G + +N+LI C G++ K+V+ F+K + P + +YN ++H L
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV----PNEVTYNTLIHGLC 303
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + ++M P+ +TY ++ + + RLL M G+ + H
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
Y++L+ L K K A++L M E G P+++ ++ L+DGL R G + K + M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC+P+ Y+ ++ + G E+A ++ M G N F Y+ +I G C G+
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
EA + +M + G P+ + Y++++ L G + A ++ M+
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 126/295 (42%), Gaps = 44/295 (14%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI C G++ A ++ER + SK P +Y +++ L+ R+ +
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCI---PNDVTYGTLINGLVKQRRATDAVRLL 350
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M + GY + Y++++ ++ GK ++ L +M G P+ Y++L+ L +
Sbjct: 351 SSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCRE 410
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
KP A +LN M G P+ +++LM G + G + + EM GC + CY
Sbjct: 411 GKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCY 470
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKG--------------------------------- 215
+V+I G +++A ++ M+T G
Sbjct: 471 SVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLC 530
Query: 216 -----QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
P+V TYN ++ G CM A ++ M RGC+P+ + NT ++ L
Sbjct: 531 QEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 19/243 (7%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G A T++ L+ + GL + V+ + + K Y+ ++ L G+ +
Sbjct: 423 MIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGR 482
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM---GRSGFSPDFHT 117
K V+ +M G PD + Y+ ++ +G +D +L EM PD T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEM 176
YNILL L A++LLN M + G DP V+ T ++ LS N D + F +E
Sbjct: 543 YNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEE- 601
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
++ + + A + + M+ K P T+ ++R C K
Sbjct: 602 --------------LVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKI 647
Query: 237 DEA 239
+ A
Sbjct: 648 NAA 650
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 115/218 (52%), Gaps = 1/218 (0%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+++ G PD++TY++++ R G+ D LL++M R+G PD TY+ L++VL K
Sbjct: 288 EELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKE 347
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
K A LL M+ G P+V+ + ++MDGL ++G +D ++ M C PDVV Y
Sbjct: 348 RKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTY 407
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++++ AG L+ A LF+ + + + P+ Y+ +I C AGK +EAC M ME
Sbjct: 408 SIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEV 467
Query: 249 RGCNPNFL-VYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
N LV+ L +A + A ++ E+G
Sbjct: 468 TVAGDNICRALAGLVAALCDAERTDSARRIVEVASERG 505
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 39/303 (12%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C V A KV+E+ ++ + P +Y +L+ L + KL V+Q+M G
Sbjct: 98 LCRASRVMDAYKVLEKMVEESIV---PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGC 154
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P+ +TY ++ R G++D+ R++ E D T ++ L K + AL
Sbjct: 155 KPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALK 214
Query: 137 LLNHMKEVGFDPSVLHFTTL------------------------------------MDGL 160
+ M+++G P+ + ++ L +D L
Sbjct: 215 FMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDAL 274
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+AG LD + +E+ G +PDVV Y+++I ++ AG+ + + +L + M G P+V
Sbjct: 275 CKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDV 334
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY+++I C KF +A +++ ME+ G PN + YN+++ L +GK+ E H V
Sbjct: 335 VTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEM 394
Query: 281 MVE 283
M++
Sbjct: 395 MLK 397
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 4/235 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G + ARK VE +S + P +Y+ +++ Q+ + + M G
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVV---PDVVTYSMLINTFARAGQFDASLELLEDMRRNGV 330
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD++TY+ ++ + K RLL+ M +G P+ TYN ++ L K K
Sbjct: 331 KPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHR 390
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M + P V+ ++ +M+GLS+AG LD+ F+ + + PD Y+++ITS
Sbjct: 391 VYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLC 450
Query: 197 AAGELEKAQDLFDGMITKGQLPNV-FTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
AG+LE+A ++ GM N+ ++ C A + D A +++ RG
Sbjct: 451 RAGKLEEACGMYHGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERG 505
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
Y P + YN ++ R ++ +++L++M P+ TY ILL+ L + +K A
Sbjct: 84 YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAR 143
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
+ MK G P+ + + TL+ LSRAG +D E + DV+ T ++
Sbjct: 144 EVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGL 203
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR-GCNPN 254
A L+ A + M G PN TY++++ GF G+ D +E ++R G +
Sbjct: 204 CKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLE 263
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
Y + L AG L A + + + + G Y L++ F R
Sbjct: 264 AAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 1/117 (0%)
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
A K + G D +T++ T + + LF + ++G + TY ++
Sbjct: 2 AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G C AG ++A +++E+ S P +YN +++ L A ++ +A++V+ MVE+
Sbjct: 62 DGLCGAGMANQALELVREL-SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEE 117
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 117/238 (49%), Gaps = 7/238 (2%)
Query: 66 WV-YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
W Y+++ D GY PD+ +N++M + K+++ L E+G+ G P ++N L++
Sbjct: 210 WAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLING 269
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K L M E P V ++ L++GL + G LD F EM ++G +P+
Sbjct: 270 YCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPN 329
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V +T +I + G + +++ M+ KG P+V TYN++I G C G EA ++
Sbjct: 330 DVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVI 389
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
EM RG P+ Y L+ G L A E+ + MV++G + L+S F R
Sbjct: 390 EMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCR 447
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+ P +N ++H L + + ++ ++ G P ++++N ++ + G LDQ
Sbjct: 221 YPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGF 280
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
RL M + PD TY++L++ L K + A L M + G P+ + FTTL++G
Sbjct: 281 RLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGH 340
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
G D + +M KG PDV+ Y +I G+L +A+ L M +G P+
Sbjct: 341 CVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDK 400
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
FTY +I G C G + A + KEM G + + + L+S G++ EA +R
Sbjct: 401 FTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLRE 460
Query: 281 MVEKG 285
M+E G
Sbjct: 461 MLEAG 465
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 134/286 (46%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+ G T +FN LI C G + ++ +++++F P +Y+ +++ L
Sbjct: 253 KRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF---PDVFTYSVLINGLCKEG 309
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q ++ +M D G P+ +T+ ++ G+ D + +M R G PD TYN
Sbjct: 310 QLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYN 369
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L++ L K A L+ M + G P +T L+DG + G+L++ EM +
Sbjct: 370 TLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKE 429
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G D V +T +I+ + G++ +A+ M+ G P+ TY +I GFC G
Sbjct: 430 GIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTG 489
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+ G P + YN L++ L G++ A+ ++ M+ G
Sbjct: 490 FKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLG 535
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 126/277 (45%), Gaps = 14/277 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKV----VERFIKSKLFNFRPFKNSYNAILH 53
M+EN T+++LI C G++ A K+ +R + F N +
Sbjct: 286 MMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGR 345
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
A LG+ +YQQM +G PD++TYN ++ ++G L + +L+ EM + G P
Sbjct: 346 ADLGME-------IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKP 398
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TY +L+ K +AL + M + G + + FT L+ G R G + +
Sbjct: 399 DKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTL 458
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM G PD YT++I + G+++ L M G +P V TYN ++ G C
Sbjct: 459 REMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQ 518
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
G+ A ++ M + G P+ + YN L+ A K
Sbjct: 519 GQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 23/248 (9%)
Query: 42 RPFKNSYNAILHALL---GIRQYKLIEWVYQQM-SDEGYAPDILTYNIVMCAKYRLGKLD 97
R KNS +++ ++L G Q L+ V +D GY D +
Sbjct: 132 RKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAI---------------- 175
Query: 98 QFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM 157
Q RL+ + FH+ L L K + A + + G+ P V F LM
Sbjct: 176 QCFRLVR---KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLM 232
Query: 158 DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
L + ++ + F E+ +G P VV + +I Y +G L++ L M+
Sbjct: 233 HRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVF 292
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
P+VFTY+ +I G C G+ D+A + EM RG PN + + TL++ G+ E+
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352
Query: 278 IRHMVEKG 285
+ M+ KG
Sbjct: 353 YQQMLRKG 360
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 117/226 (51%), Gaps = 2/226 (0%)
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ KLIE + Q M + P Y ++ A +G+ D+ L ++M G+ +
Sbjct: 37 VKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNV 96
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
H L+ V + + AAL+LL+ MK FD ++ + +D + G +D FF E
Sbjct: 97 HLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHE 156
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +PD V YT M+ A L++A ++F+ M Q+P + YN+MI G+ AGK
Sbjct: 157 MKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGK 216
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
FDEA ++++ ++GC P+ + YN +++ L GK +A + M
Sbjct: 217 FDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM 262
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 7/284 (2%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKL---FNFRPFKNSYNAILHALLGIRQY 61
GF T T L+ +C + +RK++E F ++ F FRP ++Y ++ AL + +
Sbjct: 21 GFGPTNYTCVELVASCVK---SRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGALSEVGES 77
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++ QM + GY ++ ++ R G++D LLDEM + F D YN+
Sbjct: 78 DRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADIVLYNVC 137
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ GK K A + MK G P + +T++M L +A LD F++M
Sbjct: 138 IDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQ 197
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P Y MI Y +AG+ ++A L + KG +P+V YN ++ GK D+A
Sbjct: 198 VPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALR 257
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM+ R PN YN ++ L AG + A +V M E G
Sbjct: 258 IFEEMK-RDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GE R + E IK++ F P SY+ ++H+L+ + +Y M D+G D
Sbjct: 424 GETEKGRALFEE-IKAR--GFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDT 480
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
YN V+ + GK+++ ++LL+EM G P TY ++ L K D+ A L
Sbjct: 481 RAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEE 540
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
K G + + + +++L+DG + G +D +EM KG P+V + ++ + A E
Sbjct: 541 AKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEE 600
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A F M PN TY +I G C KF++A +EM+ +G PN + Y
Sbjct: 601 INEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTA 660
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++S L +G +A+A + G
Sbjct: 661 MISGLAKSGNVAQASSLFERFRASG 685
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 109/219 (49%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M D P+++ Y ++ ++ + + H++ EM RSG SPD N + +
Sbjct: 362 IYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVF 421
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + L +K GF P ++ L+ L +AG + M ++GC+ D
Sbjct: 422 KAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTR 481
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I + +G++ KA L + M T G P V TY S++ G + DEA + +E
Sbjct: 482 AYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEA 541
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S G N ++Y++L+ G++ EA+ V+ M++KG
Sbjct: 542 KSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 141/292 (48%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G R +N +I C G+V A +++E K P +Y +++ L
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM---KTMGHHPTVVTYGSVVDGLAK 527
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ G + + Y+ ++ ++G++D+ + +++EM + G +P+ +T
Sbjct: 528 IDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYT 587
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL MK++ P+ + + L++GL + + F+ EM
Sbjct: 588 WNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQ 647
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ + YT MI+ +G + +A LF+ G +P+ +YN+MI G +A +
Sbjct: 648 KQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRAL 707
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+A + +E +GC+ + L+ L A L +A V + E K H
Sbjct: 708 DAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLRETAKSQH 759
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 119/254 (46%), Gaps = 3/254 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G V A ++ ER + + P Y +++ + + +Y++M G +PD+
Sbjct: 354 GRVDDAYRIYERMLDADQI---PNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDL 410
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+ N M ++ G+ ++ L +E+ GF PD +Y+IL+H L K L
Sbjct: 411 MLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYA 470
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
MK+ G + T++DG ++G ++ +EM G P VV Y ++
Sbjct: 471 MKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDR 530
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
L++A LF+ + G N Y+S+I GF G+ DEA +M+EM +G PN +N
Sbjct: 531 LDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNC 590
Query: 261 LVSNLRNAGKLAEA 274
L+ L A ++ EA
Sbjct: 591 LLDGLVKAEEINEA 604
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 138/283 (48%), Gaps = 6/283 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NI+I C G V A KV + ++ LF P + N ++ L ++ ++
Sbjct: 272 TYNIIIGMLCKAGNVEAAFKVRDAMKEAGLF---PNVRTINIMIDRLCKAQKLDEACSIF 328
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ M + +PD T+ ++ + G++D +R+ + M + P+ Y L+ K
Sbjct: 329 EGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKC 388
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
D+ + M G P ++ T MD + +AG + + F+E+ +G +PD Y
Sbjct: 389 DRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSY 448
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I S + AG + +L+ M +G + + YN++I GFC +GK ++A +++EM++
Sbjct: 449 SILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKT 508
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
G +P + Y ++V L +L EA+ + G ++ V
Sbjct: 509 MGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQV 551
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 125/285 (43%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M N F +N+ I G+VG + F + K P +Y +++ L +
Sbjct: 122 MKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANR 181
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++QM P YN ++ GK D+ + LL+ G P YN
Sbjct: 182 LDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNC 241
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+L LGK K AL + MK P++ + ++ L +AGN++A D M G
Sbjct: 242 ILTCLGKKGKTDKALRIFEEMKRDAM-PNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAG 300
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V +MI A +L++A +F+GM K P+ T+ S+I G G+ D+A
Sbjct: 301 LFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAY 360
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + M PN +VY +L+ N + + H++ + M+ G
Sbjct: 361 RIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSG 405
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 128/281 (45%), Gaps = 1/281 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N ++ G+ G K + F + K + P +YN I+ L + V M
Sbjct: 238 AYNCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAM 296
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G P++ T NI++ + KLD+ + + M SPD T+ L+ LGK +
Sbjct: 297 KEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRV 356
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + M + P+V+ +T+L+ + + + EM GC PD++
Sbjct: 357 DDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTY 416
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ AGE EK + LF+ + +G LP+ +Y+ +I AG E + M+ +GC
Sbjct: 417 MDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGC 476
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ YNT++ +GK+ +A++++ M G + +V+
Sbjct: 477 VLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVT 517
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TF+IL+ C G + A+ ++ +K + P +Y++++ + + + V+
Sbjct: 271 TFSILVDALCKDGNITRAKNMLAVMMKQGVI---PDVVTYSSLMDGYCLVNEVNKAKHVF 327
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
MS G AP +YNI++ ++ +D+ L EM G +PD TYN L+ L K
Sbjct: 328 STMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKL 387
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L++ M G +L + +L+D L + ++D ++ ++G P + Y
Sbjct: 388 GRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTY 447
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++I G L+ AQD+F ++ KG N +TYN MI G C G F+EA ++ +ME+
Sbjct: 448 NILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMEN 507
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y T++ L + +A +++R M+ +G
Sbjct: 508 NGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 141/288 (48%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I GF ++ LI C GE A +++++ I+ KL N YN I+++L
Sbjct: 155 VIALGFHLDQVSYRTLINGLCKIGETRAALQMLKK-IEGKLVNTDVVM--YNIIINSLCK 211
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M + +PD++T+N ++ +G+L + L EM +PD +T
Sbjct: 212 DKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYT 271
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++IL+ L K A N+L M + G P V+ +++LMDG ++ K+ F M+
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P Y +MI +++A LF M KG P+ TYNS+I G C G+
Sbjct: 332 RLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRIS 391
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EM + G + L YN+L+ L + +A +++ + ++G
Sbjct: 392 YAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 439
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 123/253 (48%), Gaps = 6/253 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G T++ L+ C EV A+ V F P +SYN +++ L
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHV---FSTMSRLGVAPHAHSYNIMINGLGK 351
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I+ ++++M +G APD +TYN ++ +LG++ +L+DEM +G D T
Sbjct: 352 IKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILT 411
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ VL K A+ L+ +K+ G PS+ + L+DGL + G L + F ++
Sbjct: 412 YNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 471
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG + Y +MI G +A+ L M G +P+ TY ++IR + +
Sbjct: 472 IKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENE 531
Query: 238 EACTMMKEMESRG 250
+A +++EM RG
Sbjct: 532 KAEKLLREMIIRG 544
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 4/253 (1%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIR--QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
++ RP + +N IL +++ Y + Q+ +G P I+T+NI++
Sbjct: 47 RMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCH 106
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
LG++ + ++ + G+ P T+N L++ + K AL+ +H+ +GF +
Sbjct: 107 LGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVS 166
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+ TL++GL + G A ++ K DVV Y ++I S + A L+ MI
Sbjct: 167 YRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMI 226
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
TK P+V T+NS+I GFC+ G+ EA + EM + NP+ ++ LV L G +
Sbjct: 227 TKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNIT 286
Query: 273 EAHEVIRHMVEKG 285
A ++ M+++G
Sbjct: 287 RAKNMLAVMMKQG 299
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T TFNIL+ C GE+ A + + +K + P ++N +++ + +
Sbjct: 89 GITPTIVTFNILVNCYCHLGEMTFAFSIFAKILK---LGYHPTTITFNTLINGICLNGKL 145
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K + + G+ D ++Y ++ ++G+ ++L ++ + D YNI+
Sbjct: 146 KEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNII 205
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ L K A L + M P V+ F +L+ G G L F EM K
Sbjct: 206 INSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNI 265
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDV +++++ + G + +A+++ M+ +G +P+V TY+S++ G+C+ + ++A
Sbjct: 266 NPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKH 325
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M G P+ YN +++ L + EA + + M KG
Sbjct: 326 VFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G A ++NI+I G++ + + + F + P +YN+++ L + +
Sbjct: 334 GVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYA 393
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M + G DILTYN ++ + +D+ L+ ++ G P +TYNIL+
Sbjct: 394 WQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDG 453
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L KG + A ++ + G+ + + +++GL + G + + +M N G +PD
Sbjct: 454 LCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPD 513
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
V Y +I + E EKA+ L MI +G L
Sbjct: 514 AVTYETIIRALFRKDENEKAEKLLREMIIRGLL 546
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 103/223 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ ++ GY P +T+N ++ GKL + D + GF D +Y L++ L
Sbjct: 116 IFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC 175
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + AAL +L ++ + V+ + +++ L + + + EM K PDVV
Sbjct: 176 KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV 235
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ +I + G+L++A LF M+ K P+V+T++ ++ C G A M+ M
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVM 295
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+G P+ + Y++L+ ++ +A V M G H
Sbjct: 296 MKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPH 338
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 92/191 (48%), Gaps = 6/191 (3%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP--LAALNLLNHMKEVGFDPSVLHF 153
+ FHR+L R +P +N +L + K + A++L + ++ G P+++ F
Sbjct: 42 VSSFHRML----RMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTF 97
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
L++ G + F ++ G P + + +I G+L++A D +I
Sbjct: 98 NILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA 157
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G + +Y ++I G C G+ A M+K++E + N + ++YN ++++L +++
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217
Query: 274 AHEVIRHMVEK 284
A+++ M+ K
Sbjct: 218 AYQLYSEMITK 228
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 2/122 (1%)
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAG--ELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F M P +V + ++ S + A A L + KG P + T+N ++ +
Sbjct: 45 FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
C G+ A ++ ++ G +P + +NTL++ + GKL EA H++ G ++
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164
Query: 291 VS 292
VS
Sbjct: 165 VS 166
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 132/277 (47%), Gaps = 6/277 (2%)
Query: 13 FNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGIRQYKL-IEW-VY 68
F+ LI + G V+ R + F P + N +L ++ +R ++ W +Y
Sbjct: 179 FDALISAYVDSGFTPDAVQCFRLVTKNKFPV-PIRGCEN-LLRRVVRLRPVEIERSWALY 236
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++ D GY P I +N++M + G + + DE+ + G P ++N L+ K
Sbjct: 237 LEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKS 296
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
L M+ G P V F+ L++GL + G LD FDEM +G +P+ V +
Sbjct: 297 GDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTF 356
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I G+++ A F M+ +G P++ TYN++I G C G EA ++ EM +
Sbjct: 357 TTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTA 416
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + + TL+ G + A E+ R MVE+G
Sbjct: 417 SGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEG 453
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 139/323 (43%), Gaps = 41/323 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++++G+P FN+L+ C G+VG AR V + K L RP S+N ++
Sbjct: 239 VLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGL---RPTVVSFNTLISGCCK 295
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM-GR-------- 108
+ + M EG PD+ T++ ++ + G+LD+ L DEM GR
Sbjct: 296 SGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVT 355
Query: 109 --------------------------SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
G PD TYN L++ L K A L+N M
Sbjct: 356 FTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMT 415
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + FTTL+DG + G++++ M +G D V +T +I+ G +
Sbjct: 416 ASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVH 475
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A + M++ G P+ TY +I FC G ++KEM+S G P + YN L+
Sbjct: 476 DAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALM 535
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L G++ A ++ M+ G
Sbjct: 536 NGLCKQGQMKNAKMLLDAMLNVG 558
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+Q M +G PD++TYN ++ ++G L + RL++EM SG PD T+ L+ K
Sbjct: 376 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCK 435
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+AL + M E G + + FT L+ GL R G + +M + G PD
Sbjct: 436 DGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPT 495
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT++I + G+++ L M + G +P V TYN+++ G C G+ A ++ M
Sbjct: 496 YTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAML 555
Query: 248 SRGCNPNFLVYNTLV 262
+ G PN + YN L+
Sbjct: 556 NVGVAPNDITYNILL 570
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G+ P + F LM G +AG++ + FDE+ +G P VV + +I+ +G++E
Sbjct: 241 DSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVE 300
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M ++G P+VFT++++I G C G+ DE + EM RG PN + + TL+
Sbjct: 301 EGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLI 360
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
GK+ A + + M+ +G LV+
Sbjct: 361 DGQCKGGKVDLALKNFQMMLAQGVRPDLVT 390
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 111/273 (40%), Gaps = 9/273 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G TF LI C G+V LA K + + RP +YNA+++ L
Sbjct: 344 MCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQ---GVRPDLVTYNALINGLCK 400
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ K + +M+ G PD +T+ ++ + G ++ + M G D
Sbjct: 401 VGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVA 460
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ L + + A +L M GF P +T ++D + G++ EM
Sbjct: 461 FTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQ 520
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +P VV Y ++ G+++ A+ L D M+ G PN TYN ++ G G
Sbjct: 521 SDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSV 580
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ E +G ++ Y LV+ K
Sbjct: 581 DVDIFNSE---KGLVTDYASYTALVNESSKTSK 610
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + + V+ ++ G P ++++N +M RLG +D+ RL + M
Sbjct: 128 FNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMH 187
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A + + M + G P+ + FTTL+DG + G +D
Sbjct: 188 ASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVD 247
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A DL D M KG P+ TY ++I
Sbjct: 248 LAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 307
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L + +A +V+R M+
Sbjct: 308 DGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLK 367
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 368 PDTGTYTMIINEF 380
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V K + RP S+N +++ +
Sbjct: 116 ILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITK---WGLRPSVVSFNTLMNGYIR 172
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + + DEM G P+ T
Sbjct: 173 LGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGVT 232
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 233 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 292
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A + MI + + Y ++I G C ++
Sbjct: 293 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQEERYL 352
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+A +++EM S G P+ Y +++ G + ++++ M
Sbjct: 353 DAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEM 396
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 134/283 (47%), Gaps = 10/283 (3%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
+T R F+ L T + R + F++ K + F P S NA + +LLG + +
Sbjct: 166 STPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y++M +P+ T N+VM R GKLD+ LL +M R GF +YN L + G
Sbjct: 226 YREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTL--IAGH 283
Query: 128 GDKPL--AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+K L +AL L N M + G P+V+ F TL+ G RA L F EM P+
Sbjct: 284 CEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNT 343
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I Y G+ E A ++ M+ G ++ TYN++I G C K +A +KE
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKE 403
Query: 246 MESRGCNPNFLVYNTLVSNL---RNAGKLAEAHEVIRHMVEKG 285
++ PN ++ L+ RNA + E+ + M+ G
Sbjct: 404 LDKENLVPNSSTFSALIMGQCVRRNADR---GFELYKSMIRSG 443
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 123/264 (46%), Gaps = 7/264 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNS---YNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
G V L KV + L+++R ++ ++++ +++++ + QM D G+
Sbjct: 145 GGVDLPAKVFDAL----LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL 200
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P + + N M + G++D R EM R SP+ +T N+++ + K + L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIEL 260
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M+ +GF + + + TL+ G G L + + M G P+VV + +I +
Sbjct: 261 LQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCR 320
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A +L++A +F M PN TYN++I G+ G + A ++M G + L
Sbjct: 321 AVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHM 281
YNTL+ L K +A + ++ +
Sbjct: 381 YNTLILGLCKQAKTRKAAQFVKEL 404
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 104/248 (41%), Gaps = 6/248 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF T ++N LI C G + A K+ K+ L +P ++N ++H +
Sbjct: 268 GFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGL---QPNVVTFNTLIHGFCRAVKL 324
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+ +M P+ +TYN ++ + G + R ++M +G D TYN L
Sbjct: 325 QEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTL 384
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A + + + P+ F+ L+ G N D + M GC
Sbjct: 385 ILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGC 444
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ + ++I+++ + + A + M+ + + T + + G GK
Sbjct: 445 HPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVCNGLNHQGKDQLVKE 504
Query: 242 MMKEMESR 249
+++EME +
Sbjct: 505 LLQEMEGK 512
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM--------------------KEVGFD 147
R+ S T+ I+LH L K K +A ++L + +E
Sbjct: 108 RNPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDST 167
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P V F +L + F +M + G +P V ++S + G ++ A
Sbjct: 168 PRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+ M PN +T N ++ G+C +GK D+ ++++ME G + YNTL++
Sbjct: 226 YREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAGHCE 285
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
G L+ A ++ M + G ++V+
Sbjct: 286 KGLLSSALKLKNMMGKNGLQPNVVT 310
>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
Length = 630
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 126/255 (49%), Gaps = 6/255 (2%)
Query: 37 KLFNFRPFKN------SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
KLF F K +YN +LH LL + + + ++M +EG P ++TY V+
Sbjct: 252 KLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGL 311
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ G+++ ++ EMG G +P ++ ++ K + AL + M P+V
Sbjct: 312 VKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNV 371
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ ++ ++DG +R+G + + F+EM + C+P++V Y+ M+ Y +A ++
Sbjct: 372 VLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEE 431
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
MI G +P +Y+ +I G C G+ +A + K M RGC P+ + Y +++ L +G
Sbjct: 432 MIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSGM 491
Query: 271 LAEAHEVIRHMVEKG 285
+ + M+ KG
Sbjct: 492 VDGGLRLFNDMLAKG 506
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 13/291 (4%)
Query: 5 GFPTTARTFNILI-CTCGE---------VGLARKVVERFIKSKLFNFRPFKNSYNAILHA 54
G T +FN+L+ C C + +A ++ I + +N P K +Y+ ++ A
Sbjct: 149 GLTPTLLSFNLLLKCICSSMVPRNPGLYLAVALGILHDVIPA--WNLVPDKFTYSTVVSA 206
Query: 55 LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
L + + +M +G +N V+ A R G ++ +L M G +
Sbjct: 207 LADAGCVEEAVALVHEMVVDGVV-SAEAFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLT 265
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYN+LLH L + AA+N++ M+ G P ++ + ++DGL + G ++
Sbjct: 266 AVTYNVLLHGLLLCGEARAAMNIMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQ 325
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
EM +G P ++ +IT + +GE+++A +++ M+ PNV Y++MI GF +G
Sbjct: 326 EMGGQGLAPSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSG 385
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ EA + +EM C PN + Y+++V + + A M++ G
Sbjct: 386 RMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWEEMIKVG 436
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 107/241 (44%), Gaps = 4/241 (1%)
Query: 20 CGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPD 79
CG V A KV + L P + ++A++ + V++ M P+
Sbjct: 314 CGRVEDAWKVAQEMGGQGL---APSEFVFSAVITGFCKSGEVDRALMVWETMVAARVKPN 370
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
++ Y+ ++ R G++ + +L +EM + P+ TY+ ++ AL+
Sbjct: 371 VVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIVTYSSMVRGYFHIANSSRALSTWE 430
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M +VG P+ + ++ L+ GL G L + M +GC PD + YT M+ +G
Sbjct: 431 EMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNMIGRGCAPDTIAYTSMMKGLCMSG 490
Query: 200 ELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
++ LF+ M+ KG P+V +YN ++ A ++ +M + C+P+ +
Sbjct: 491 MVDGGLRLFNDMLAKGDAKPDVISYNVLLDALIRTNDLPRAMDLLNQMLDQMCDPDTITC 550
Query: 259 N 259
N
Sbjct: 551 N 551
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GEV A V E + +++ +P Y+A++ + E ++++M D
Sbjct: 347 CKSGEVDRALMVWETMVAARV---KPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCI 403
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+I+TY+ ++ + + + +EM + G P +Y+IL+ L + A+ +
Sbjct: 404 PNIVTYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMV 463
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYI 196
+M G P + +T++M GL +G +D F++M KG PDV+ Y V++ + I
Sbjct: 464 WKNMIGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLAKGDAKPDVISYNVLLDALI 523
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+L +A DL + M+ + P+ T N +R F
Sbjct: 524 RTNDLPRAMDLLNQMLDQMCDPDTITCNIFLREF 557
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 158/378 (41%), Gaps = 83/378 (21%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERF--------------------------- 33
M +N T+ TF ILI GL R+ V F
Sbjct: 143 MDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDMSCFVEKDADSDDFCYLLDTLSKYG 202
Query: 34 ---IKSKLFNFRPFKNSYNAILHALL-----GIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
+ S++FN R FK NA ++ +L I + + E + +M + G +++TYN+
Sbjct: 203 YVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVVTYNV 262
Query: 86 VM---CAKYRLGKLDQFHR-------LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
++ C + L D+F R +LDEM + G PD +Y+I++HV + KP L
Sbjct: 263 LLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTL 322
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG--------------- 180
+ L MK+ G P+V +T+++ L G L+ + +M G
Sbjct: 323 DKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEY 382
Query: 181 ---------------------CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
C+PD+ Y +++ ++ +E Q+++D M T G P+
Sbjct: 383 RGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPD 442
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ +Y +I G C K+ EAC EM +G P + + TL L + L + +
Sbjct: 443 LDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKK 502
Query: 280 HMVEKGKYIHLVSKFKRY 297
+ E+ I S+F++Y
Sbjct: 503 KLEEES--ITFGSEFQQY 518
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 111/283 (39%), Gaps = 45/283 (15%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM------------------- 87
SYN I+ L +RQ+ + +M P T+ I++
Sbjct: 119 SYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPTSTTFRILIRRSVSAGLTRQAVRAFDDM 178
Query: 88 -CAKYRLGKLDQFHRLLDEMGRSG---------------FSPDFHTYNILLHVLGKGDKP 131
C + D F LLD + + G F + Y IL++ K ++
Sbjct: 179 SCFVEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILIYGWCKINRV 238
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF----------FDEMANKGC 181
A LL M E G + +V+ + L++G+ R +L F DEM KG
Sbjct: 239 SIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKVLDEMRQKGI 298
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDV Y+++I Y A + E D M KG P V TY S+++ C G+ ++A
Sbjct: 299 EPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEE 358
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ +M G +P+ YN R A + R M E+
Sbjct: 359 LVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEE 401
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P ++++N +M RLG LD+ RL M
Sbjct: 139 FNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M + G P+ + FTTL+ G + +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A DL D M KG P+ TY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +V+R M+
Sbjct: 319 DGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 379 PDTGTYTMIINEF 391
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 137/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G+P + FNIL+ C G++ +A+ V K + RP S+N +++ +
Sbjct: 127 ILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITK---WGLRPSVVSFNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L DEM+
Sbjct: 244 FTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KG PD + YT +I G+LE A + MI + + Y ++I G C G++
Sbjct: 304 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYL 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A +++EM S G P+ Y +++ G + ++++ M G +VS
Sbjct: 364 DAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVS 418
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 131/285 (45%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALLGIR 59
M+ G T LI ++G + F+K K +++P ++Y ++
Sbjct: 281 MVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEG 340
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ E + +M ++G AP+ TY ++ + G + L+++M R GF P+ +TYN
Sbjct: 341 KLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYN 400
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ L K K A +L G + +T ++ + G++ F+ MA
Sbjct: 401 ALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAEN 460
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC PD+ YT +I Y ++E++Q LFD + +P TY SMI G+C GK A
Sbjct: 461 GCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSA 520
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ + M GC + + Y L+S L +L EA + M++K
Sbjct: 521 LRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDK 565
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 131/292 (44%), Gaps = 12/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G P T N ++ G ARKV + + P S+ A++
Sbjct: 140 MRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG--GLLPDARSFRALIVGCCR 197
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + ++ + M +G+ D T +++ C K R + + R + EMG P+
Sbjct: 198 DGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTP---PN 254
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFF 173
Y + L K A +L M G P+V T+L++GL + G + A + F
Sbjct: 255 VVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFL 314
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ + P+V YTVMI Y G+L +A+ L M+ +G PN TY ++I G C
Sbjct: 315 KLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKE 374
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G F+ A +M +M G PN YN L+ L GK+ EA++V+R +G
Sbjct: 375 GSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQG 426
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 3/274 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G T+ LI + G E K + F+P +YNA++ L +
Sbjct: 352 MVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGK 411
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V + +++G D +TY +++ + G + L + M +G PD HTY
Sbjct: 412 IQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTT 471
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + + L + + P+ +T+++ G + G + F+ M G
Sbjct: 472 LIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNG 531
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C D + Y +I+ LE+A+ L++GM+ K +P T ++ +C K A
Sbjct: 532 CQADSITYGALISGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAV 591
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+++ ++ R N N LV L G + +A
Sbjct: 592 SILDRLDKRRKNHTV---NVLVRKLSAIGHVEDA 622
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++ + AG L EM + G V ++ + + G A+ +FDGM+T+G
Sbjct: 120 MVAAFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRG 179
Query: 216 Q-LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
LP+ ++ ++I G C G+ +E ++ M+ +G + +V G+ +
Sbjct: 180 GLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDV 239
Query: 275 HEVIRHMVEKGKYIHLVS 292
E+ R M+E G ++V+
Sbjct: 240 SELFRRMLEMGTPPNVVN 257
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 4/280 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
++ R F+ L T + R + F + K + F P S NA L +LL + +
Sbjct: 127 SSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFHRVDIALTF 186
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y++M +P+ T+N+V+ A + GKL++ +L EM G +P+ +YN L + G
Sbjct: 187 YREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTL--IAGH 244
Query: 128 GDKPL--AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+K L A L N M + G +P+V+ F +L+ G + G L FF EM P+
Sbjct: 245 CNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNT 304
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I Y G A +++ M+ G ++ TYN++I G C GK +A ++KE
Sbjct: 305 VTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKE 364
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ PN Y+ L+S A ++ + MV G
Sbjct: 365 LDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSG 404
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 117/247 (47%), Gaps = 3/247 (1%)
Query: 38 LFNFRPFKNS---YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
LF++R +S ++++ + +++ V+ +M D G+ P + + N + +
Sbjct: 119 LFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSSLLDFH 178
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
++D EM R SP+ +T+N++L L K K A+ +L M+ VG P+V+ +
Sbjct: 179 RVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYN 238
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
TL+ G G L + M G P+VV + +I + G+L +A F M
Sbjct: 239 TLIAGHCNKGLLSIATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVM 298
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
PN TYN++I G+ G + A + +EM G + L YN L+ L GK +A
Sbjct: 299 NVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKA 358
Query: 275 HEVIRHM 281
+++ +
Sbjct: 359 AFLVKEL 365
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 99/252 (39%), Gaps = 35/252 (13%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN+++ + G K VE + + P SYN ++ + + M
Sbjct: 201 TFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLSIATKLKNLM 260
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G P+++T+N ++ + GKL + +R EM +P+ TYN
Sbjct: 261 GKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYN------------ 308
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
TL++G + GN + ++EM G D++ Y +
Sbjct: 309 -----------------------TLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNAL 345
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I G+ +KA L + + +PN TY+++I G C D A + K M GC
Sbjct: 346 ILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGC 405
Query: 252 NPNFLVYNTLVS 263
+PN + L S
Sbjct: 406 HPNEQTFKMLTS 417
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 107/252 (42%), Gaps = 6/252 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G ++N LI C G + +A K+ K+ L P ++N+++H +
Sbjct: 229 GITPNVVSYNTLIAGHCNKGLLSIATKLKNLMGKNGL---EPNVVTFNSLIHGFCKEGKL 285
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ +M P+ +TYN ++ ++G + ++ +EM R+G D TYN L
Sbjct: 286 HEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMMRNGVKADILTYNAL 345
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A L+ + + P+ ++ L+ G N D + M GC
Sbjct: 346 ILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSDRAFQLYKSMVRSGC 405
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ + ++ ++++ + E A ++ M + + T + G C GK + A
Sbjct: 406 HPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIYDGLCQCGKENLAMK 465
Query: 242 MMKEMESRGCNP 253
+ EME+R P
Sbjct: 466 LCHEMEARRLIP 477
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 21/183 (11%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
S T++I+LH+L K K +A ++L TL+ S +D
Sbjct: 73 SLTLETHSIILHILTKKSKFKSAQSILR---------------TLLASRS----IDLPGK 113
Query: 172 FFDEM--ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
FD + + + C + + +Y + A D+F M G LP V + N+ +
Sbjct: 114 LFDTLLFSYRMCDSSPRVFDSLFKTYAHMNKFRNATDVFSRMKDYGFLPTVESCNAYLSS 173
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+ D A T +EM +PN +N ++S L +GKL +A EV+R M G +
Sbjct: 174 LLDFHRVDIALTFYREMRRCRISPNSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPN 233
Query: 290 LVS 292
+VS
Sbjct: 234 VVS 236
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 15/289 (5%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N ++ C G + AR++++ F P +YN ++ AL +R
Sbjct: 123 GPSATIITYNTMVNGYCRAGNIDAARRMIDSV------PFAPDTFTYNPLIRALC-VRGC 175
Query: 62 KLIEW-VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
L V+ M G +P ++TY+I++ A + Q LLDEM G PD TYN+
Sbjct: 176 VLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNV 235
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + AL +LN + G P + +T ++ L + + +M +
Sbjct: 236 LINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSND 295
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD V + +ITS G + +A + M G P++ TY+S++ G C + DEA
Sbjct: 296 CAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAI 355
Query: 241 TMMK----EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++K EM S+ C P+ + +NT++++L G A +V+ M E G
Sbjct: 356 KLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHG 404
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 137/282 (48%), Gaps = 11/282 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N+LI C+ G+VG A KV+ + +P +Y +L +L +++ + +
Sbjct: 232 TYNVLINAMCSQGDVGEALKVLNSLPS---YGCKPDAVTYTPVLKSLCSSERWEEADKLL 288
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M APD +T+N V+ + + G + + ++L +M G +PD TY+ ++ L K
Sbjct: 289 TKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKE 348
Query: 129 DKPLAALNLLNH----MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ A+ LL M P + F T++ L + G D DEM+ GC+PD
Sbjct: 349 RRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPD 408
Query: 185 VVCYTVMITSYIAAG-ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ Y ++ ++ + E+A DL + M++ G P+ TY S+ G + + A M
Sbjct: 409 ITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMF 468
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +++ G +P+ ++YN ++ L + A + +MV G
Sbjct: 469 RRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNG 510
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+LD RL+ + SG P NIL+ L + A ++ + G +++ +
Sbjct: 75 GELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSATIITY 131
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
T+++G RAGN+DA + D + PD Y +I + G + A +FD M+
Sbjct: 132 NTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRALCVRGCVLDALAVFDDMLH 188
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+G P+V TY+ ++ C + +A ++ EM S+GC P+ + YN L++ + + G + E
Sbjct: 189 RGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGE 248
Query: 274 AHEVIRHMVEKG 285
A +V+ + G
Sbjct: 249 ALKVLNSLPSYG 260
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 106/251 (42%), Gaps = 46/251 (18%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M N TFN +I C G VG A KV+ + + P +Y++I+ L
Sbjct: 291 MFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSE---HGCTPDIITYSSIMDGLCK 347
Query: 58 IRQY----KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
R+ KL++ + +M + PD +T+N ++ + + G D+ +++DEM G P
Sbjct: 348 ERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIP 407
Query: 114 DFHTYNILLH-VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA---- 168
D TYN ++ L K K AL+LLN M G P + +L GLSR ++
Sbjct: 408 DITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGM 467
Query: 169 -----------------------CKY--------FFDEMANKGCMPDVVCYTVMITSYIA 197
CK FF M + GCMPD Y +++
Sbjct: 468 FRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAY 527
Query: 198 AGELEKAQDLF 208
G LE+A++L
Sbjct: 528 EGFLEEAKELL 538
>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 859
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G TFN + + + G ++ E F P SY+ +LH +
Sbjct: 360 MTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGR 419
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ M+D+G + +NI++ A + G +D+ + EM G PD TY+
Sbjct: 420 FADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYST 479
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + A+ + M +G +P+ + + +L+ G G+L K EM +KG
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKG 539
Query: 181 C-MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P++V ++ +I S G + A D+F+ +I G P + T+NS+I G+C+ GK ++A
Sbjct: 540 IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 599
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++ M S G P+ + YNTLVS +GK+ + + R M+ K
Sbjct: 600 FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHK 644
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 142/287 (49%), Gaps = 13/287 (4%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSY-NAILHALLGIRQYK 62
P + T+ IL+ C L R +++ L N++ + HA R +
Sbjct: 153 PLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAK---RTDE 209
Query: 63 LIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTY 118
++ + +MSD G P+ ++YN V +C R + LD R+ E GR SPD ++
Sbjct: 210 AVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC--SPDVVSF 267
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N ++H K + A NL+N M + G +P V+ + +++D L +A +D + +M +
Sbjct: 268 NTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVD 327
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD + YT +I Y +G +++ +F M +KG +P + T+NS + C G+ +
Sbjct: 328 KGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKD 387
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + + M ++G P+ + Y+ L+ G+ A+ + + M +KG
Sbjct: 388 AEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKG 434
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 129/265 (48%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GEV A ++ ++ + P +YN+I+ AL R E V +QM D+G PD
Sbjct: 278 GEVSKACNLINEMVQKGV---EPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDG 334
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
LTY ++ G + ++ +M G P T+N + L K + A + +
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P ++ ++ L+ G + G F MA+KG + + C+ ++I+++ G
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+++A +F M +G P+V TY+++I FC G+ +A +M S G PN +VY++
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHS 514
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ G L +A E++ M+ KG
Sbjct: 515 LIHGFCMHGDLVKAKELVSEMMSKG 539
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 135/280 (48%), Gaps = 37/280 (13%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFH 100
P SYN ++ +L G + + + Q+M+ EG +PD++++N V+ ++ G++ +
Sbjct: 225 PNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 284
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L++EM + G PD TYN ++ L K A +L M + G +P L +T ++ G
Sbjct: 285 NLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGY 344
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
S +G+ F +M +KG +P +V + ++S G + A+++F M TKG +P++
Sbjct: 345 SCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDL 404
Query: 221 FTYNSMIRGFCMAGKF-----------------------------------DEACTMMKE 245
+Y+ ++ G+ G+F DEA + E
Sbjct: 405 VSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTE 464
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ +G P+ + Y+TL+S G+LA+A E M+ G
Sbjct: 465 MQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG 504
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 102/233 (43%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP ++N+++ + + + V M G PD++TYN ++ + GK+D
Sbjct: 577 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLI 636
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L EM P TY+I+L L + AA + + M + G + + L+ GL
Sbjct: 637 LFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 696
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R D F ++ C D+ +I + E+A DLF + T G +PNV
Sbjct: 697 RNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVS 756
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
TY MI G +EA TM ME GC P+ + N ++ L G + +A
Sbjct: 757 TYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 131/278 (47%), Gaps = 7/278 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWVYQQ 70
T++ LI +G +E+F + P Y++++H + K E V +
Sbjct: 476 TYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEM 535
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGK 127
MS P+I+ ++ ++ + G++ H + + + G P T+N L+ ++GK
Sbjct: 536 MSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 595
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+K A +L+ M VG +P V+ + TL+ G ++G +D F EM +K P V
Sbjct: 596 MEK---AFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 652
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y++++ AG A+ +F MI G ++ TY +++G C DEA T+ ++
Sbjct: 653 YSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 712
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C + + NT+++ L + EA+++ + G
Sbjct: 713 AMDCKFDITILNTVINALYKVRRREEANDLFAAISTSG 750
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 122/278 (43%), Gaps = 10/278 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I G T TFN LI C G++ A V++ + P +YN ++
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS---VGIEPDVVTYNTLVSGYCK 627
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++++M + P +TY+IV+ + G+ ++ EM SG + D T
Sbjct: 628 SGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDT 687
Query: 118 YNILLHVLGKGDKPLAALNLLNHMK--EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
Y ILL L + D A+ L + + + FD ++L+ T+++ L + + F
Sbjct: 688 YKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN--TVINALYKVRRREEANDLFAA 745
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
++ G +P+V Y VMI + + G +E+A +F M G P+ N +IR G
Sbjct: 746 ISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGD 805
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+A M +++ + + L+S + GK E
Sbjct: 806 IVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHRE 843
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ +
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITK---WGLRPSVVSFNTLINGYIK 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY+I++ + GKLD+ + L +EM +G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+H K +K A+ + M G P ++ + TL+ GL + G L DEM
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD + YT +I G+LE A +L + MI + + Y ++I C G+
Sbjct: 304 MNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAS 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++EM S G P+ Y +++ A +++R M G
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 128/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++ + +L + V+ ++ G P ++++N ++ +LG LD+ RL M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY+IL++ L K K A L N M + G P+ + FTTL+ G + +D
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++G PD++ Y +I GEL++ DL D MI G P+ +Y ++I
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A + +M + + Y L+S L G+ ++A +++R M+
Sbjct: 319 DGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 379 PDNGTYTMIINEF 391
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%)
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
E+ G+ + +NIL+ K + A ++ + + + G PSV+ F TL++G + G
Sbjct: 126 EVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+LD M G PDV Y+++I G+L++A +LF+ M+ G +PN T+
Sbjct: 186 DLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFT 245
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I G C K D A + K+M S+G +P+ + YNTL+ L G+L + H++I M+
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 285 G 285
G
Sbjct: 306 G 306
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T++ILI C G++ A ++ + + L P ++ ++H
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLV---PNGVTFTTLIHGHCK 253
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y+QM +G +PD++TYN ++ + G+L Q H L+DEM +G PD +
Sbjct: 254 NEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKIS 313
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K AL L N M + + +T L+ L R G + EM
Sbjct: 314 YTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREML 373
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ G PD YT++I + + + A L M G LP V T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPLPGVVT 418
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F+ E+ G + + +++ + GE+ AQ +FD + G P+V ++N++I G+
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L GKL EA+E+ M++ G
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNG 236
>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 827
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 128/265 (48%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GEV A + ++ + P +YN+I+ AL R E+V +QM D+G PD
Sbjct: 246 GEVSKACNLFNEMVQKGVV---PDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDG 302
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
+TYN ++ G + ++ +M G PD T++ + L K + A + +
Sbjct: 303 VTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQY 362
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P ++ ++ L+ G + G F MA+KG + + C ++I+++ G
Sbjct: 363 MTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGM 422
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+++A +F M +G PNV TY+++I FC G+ +A +M S G PN VY++
Sbjct: 423 MDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHS 482
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
L+ G L +A E I M+ KG
Sbjct: 483 LIHGFCMHGDLVKAKEFISEMMSKG 507
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 134/280 (47%), Gaps = 37/280 (13%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFH 100
P SYN ++ +L G + + + Q+M+ EG +PD++++N V+ ++ G++ +
Sbjct: 193 PDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKAC 252
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +EM + G PD TYN ++ L K A +L M + G +P + + ++ G
Sbjct: 253 NLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGY 312
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
S +G+ F +M +KG +PD V ++ ++S G + A+++F M TKG +P++
Sbjct: 313 SCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDI 372
Query: 221 FTYNSMIRGFCMAGKF-----------------------------------DEACTMMKE 245
+Y+ ++ G+ G+F DEA + E
Sbjct: 373 VSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTE 432
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M+ +G PN + Y+TL+S G+LA+A E M+ G
Sbjct: 433 MQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 139/287 (48%), Gaps = 13/287 (4%)
Query: 7 PTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSY-NAILHALLGIRQYK 62
P T RT+ IL+ C L V R +++ L ++ + HA R +
Sbjct: 121 PLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAK---RTDE 177
Query: 63 LIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGK-LDQFHRLLDEMGRSGFSPDFHTY 118
++ + +MS+ PD ++YN V +C R + LD R+ E GR SPD ++
Sbjct: 178 AVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRC--SPDVVSF 235
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N ++H K + A NL N M + G P V + +++D L +A +D ++ +M +
Sbjct: 236 NTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVD 295
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD V Y +I Y +G +++ +F M +KG +P+ T++S + C G+ +
Sbjct: 296 KGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKD 355
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + + M ++G P+ + Y+ L+ G+ A+ + + M +KG
Sbjct: 356 AEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKG 402
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 147/320 (45%), Gaps = 36/320 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+N +I G ++ + F K P ++++ + +L +
Sbjct: 293 MVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGR 352
Query: 61 YKLIEWVYQQMSDEGYAPDILTY-----------------------------------NI 85
K E ++Q M+ +G+ PDI++Y NI
Sbjct: 353 SKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINI 412
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ A + G +D+ + EM G P+ TY+ L+ + + A+ + M +G
Sbjct: 413 LISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG 472
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC-MPDVVCYTVMITSYIAAGELEKA 204
+P+ + +L+ G G+L K F EM +KG P++V ++ +I S G + A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
QD+F+ +I G P + T+NS+I G+C+ GK ++A ++ M S G P+ + NTLVS
Sbjct: 533 QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSG 592
Query: 265 LRNAGKLAEAHEVIRHMVEK 284
+GK+ + + R M+ K
Sbjct: 593 YCKSGKIDDGLILFREMLHK 612
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 36/326 (11%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G TF+ + + + G ++ E F P SY+ +LH +
Sbjct: 328 MTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGR 387
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ M+D+G + NI++ A + G +D+ + EM G P+ TY+
Sbjct: 388 FADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYST 447
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + + A+ + M +G +P+ + +L+ G G+L K F EM +KG
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507
Query: 181 ----------------CM--------------------PDVVCYTVMITSYIAAGELEKA 204
C+ P +V + +I Y G++EKA
Sbjct: 508 LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 567
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ D M++ G P+V T N+++ G+C +GK D+ + +EM + P + YN ++
Sbjct: 568 FGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDG 627
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHL 290
L AG+ + A ++ M++ G + +
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDI 653
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 102/193 (52%), Gaps = 2/193 (1%)
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG--FDPSVLHFTTLMDG 159
LL M PD +YN ++ L + AL+++ M + G P V+ F T++ G
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+ G + F+EM KG +PDV Y ++ + A ++KA+ + M+ KG P+
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TYN++I G+ +G + E+ M ++M S+G P+ + +++ +S+L G+ +A E+ +
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361
Query: 280 HMVEKGKYIHLVS 292
+M KG +VS
Sbjct: 362 YMTTKGHMPDIVS 374
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP ++N+++ + + + V M G PD++T N ++ + GK+D
Sbjct: 545 RPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLI 604
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L EM P TYNI+L L + + AA + + M + G + + L+ GL
Sbjct: 605 LFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 664
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R D F ++ C D+ MI + E+A DLF + T G +PNV
Sbjct: 665 RNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVS 724
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
TY MIR G +EA TM ME GC P+ + N ++ L G + +A
Sbjct: 725 TYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 131/278 (47%), Gaps = 7/278 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWVYQQ 70
T++ LI +G +E+F + P Y++++H + K E++ +
Sbjct: 444 TYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEM 503
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGK 127
MS + P+I+ ++ ++ + G++ + + + G P T+N L+ ++GK
Sbjct: 504 MSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGK 563
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+K A +L+ M VG +P V+ TL+ G ++G +D F EM +K P V
Sbjct: 564 MEK---AFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 620
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +++ + AG A+ +F MI G ++ TY +++G C DEA T+ ++
Sbjct: 621 YNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 680
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C + + NT+++ L + EA+++ + G
Sbjct: 681 AMDCKFDITILNTMINALYKVRRREEANDLFAAISTSG 718
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 123/288 (42%), Gaps = 5/288 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI G ++ LI C G++ A++ + + L RP +++I+H+L
Sbjct: 468 MISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH--RPNIVFFSSIIHSLCI 525
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V+ + G P I+T+N ++ +GK+++ +LD M G PD T
Sbjct: 526 EGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L+ K K L L M P+ + + ++DGL RAG A K F EM
Sbjct: 586 NNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMI 645
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G D+ Y +++ ++A LF + ++ N+MI + +
Sbjct: 646 DSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRRE 705
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + + G PN Y ++ NL G + EA + M + G
Sbjct: 706 EANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSG 753
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 95/253 (37%), Gaps = 52/253 (20%)
Query: 85 IVMCAKYRLGKL--DQFHRLLDEMGRSGF----------------SPD------------ 114
+ A+ R G D H L DE+ R G +PD
Sbjct: 45 VAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVL 104
Query: 115 -------------------FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
TY IL+ + +P + + G + TT
Sbjct: 105 ALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATT 164
Query: 156 LMDGLSRAGNLD-ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
+ L A D A M+ C+PD + Y +I S ++A D+ M +
Sbjct: 165 FLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKE 224
Query: 215 GQL--PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+V ++N++I GF G+ +AC + EM +G P+ YN++V L A +
Sbjct: 225 GGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMD 284
Query: 273 EAHEVIRHMVEKG 285
+A V+R MV+KG
Sbjct: 285 KAEFVLRQMVDKG 297
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 4/209 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M + P +TYNIV+ R G+ ++ EM SG + D TY ILL L
Sbjct: 605 LFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLC 664
Query: 127 KGDKPLAALNLLNHMK--EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ D A+ L + + + FD ++L+ T+++ L + + F ++ G +P+
Sbjct: 665 RNDLTDEAITLFHKLGAMDCKFDITILN--TMINALYKVRRREEANDLFAAISTSGLVPN 722
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y VMI + + G +E+A +F M G P+ N +IR G +A M
Sbjct: 723 VSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMS 782
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
+++ + + L+S + GK E
Sbjct: 783 KVDGTIISLEASTTSLLMSLFSSKGKHRE 811
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 144/295 (48%), Gaps = 21/295 (7%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ C VG ++ V F + L N +P ++N ++ L + K V M
Sbjct: 156 TYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVM 215
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ PD++TYN +M + + + ++ + + M R G +PD H+Y+++++ L K
Sbjct: 216 IKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMINGLCKTKMV 275
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A+NLL M P+ + +++L+DGL ++G + +EM N+G DV+ Y +
Sbjct: 276 DEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSL 335
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK---------------- 235
+ + +++KA L + +G P+++TY ++ G C G+
Sbjct: 336 LDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVDGLCKNGRLKDAQEVYQILLIKGY 395
Query: 236 -----FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
FD+A +++ +ME GC PN + + L+ L +A E++R M+ +G
Sbjct: 396 HLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFENDMNDKAVELLREMIARG 450
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 156/338 (46%), Gaps = 51/338 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-- 55
+I GF ++ LI C GE A +V+ R I L +P Y+ I+++L
Sbjct: 75 VIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVL-RNIDGLLV--QPNVVMYSTIIYSLCK 131
Query: 56 --LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L I + L Y QM + +PD++TYN +M +G+L + L ++M P
Sbjct: 132 DKLVIDAFDL----YSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKP 187
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +T+NIL+ L K + A N+L M + DP V+ + +LMDG + + F
Sbjct: 188 DIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVF 247
Query: 174 DEMANKGCMPDVVCYTVMI-------------------------------TSYI----AA 198
+ MA +G PDV Y+VMI +S I +
Sbjct: 248 NTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKS 307
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G + A DL + M +GQ +V TYNS++ C + D+A T++ +++ +G P+ Y
Sbjct: 308 GRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTY 367
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKR 296
LV L G+L +A EV + ++ KG HL S F +
Sbjct: 368 TILVDGLCKNGRLKDAQEVYQILLIKG--YHLDSLFDK 403
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 24/303 (7%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERF-----IKSKLFNFRPFKNSYNAILHALL 56
G T NIL+ C G+V L KV E + +K F SY ++ L
Sbjct: 38 GIQTDLVNLNILVNCFCHLGQVCLNDKVKETLHFHDDVIAKGFQLNQV--SYGTLIDGLC 95
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGK----LDQFHRLLDEMGRSGFS 112
+ + V + + P+++ Y+ ++ Y L K +D F L +M S
Sbjct: 96 KAGETRAAMQVLRNIDGLLVQPNVVMYSTII---YSLCKDKLVIDAFD-LYSQMLLKRIS 151
Query: 113 PDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
PD TYN L++ ++G+ + A+ L N M P + F L+DGL + G +
Sbjct: 152 PDVITYNTLMYGCLIVGRLKE---AVGLFNQMLLKNIKPDIYTFNILVDGLCKEGEMKKA 208
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ M + PDV+ Y ++ Y + KA +F+ M +G P+V +Y+ MI G
Sbjct: 209 RNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVHSYSVMING 268
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
C DEA ++KEM S+ PN + Y++L+ L +G++ +A +++ M +G+
Sbjct: 269 LCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFDAWDLVNEMHNRGQPAD 328
Query: 290 LVS 292
+++
Sbjct: 329 VIT 331
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 105/265 (39%), Gaps = 62/265 (23%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNIL+ C GE+ AR V+ IK + P +YN+++ ++Q +V+
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSV---DPDVITYNSLMDGYFLVKQENKATFVF 247
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP--------------- 113
M+ G PD+ +Y++++ + +D+ LL EM +P
Sbjct: 248 NTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKS 307
Query: 114 --------------------DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
D TYN LL L K + A+ LL +K+ G P + +
Sbjct: 308 GRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTY 367
Query: 154 TTLMDGLSRAGNL---------------------DACKYFFDEMANKGCMPDVVCYTVMI 192
T L+DGL + G L D +M + GC P+ V + ++I
Sbjct: 368 TILVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILI 427
Query: 193 TSYIAAGELEKAQDLFDGMITKGQL 217
+ +KA +L MI +G L
Sbjct: 428 RALFENDMNDKAVELLREMIARGLL 452
>gi|299471535|emb|CBN80021.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 607
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 135/285 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G AR++ I C G + ++ + + P YN+ +++ Q
Sbjct: 94 MPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQ 153
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+++ + ++M+ G APD+++Y+ + A R G+ ++ L ++M SG +PD TY
Sbjct: 154 WEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGS 213
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ G + A++LL + VG P+V+ +++++ ++ G EM
Sbjct: 214 AIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMR 273
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+++ Y I + G ++A DL M T G P+V +Y+S+I ++ EA
Sbjct: 274 LAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAI 333
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM + G +PN + YN+ + G+ EA ++R M G
Sbjct: 334 DILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAG 378
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 9/303 (2%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G+ +++ + I CG G + V + P ++Y+A++ A Q+K+
Sbjct: 28 GWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVIDACAKGGQWKMA 87
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +M +G APD +Y + A R G+ LL EM +P+ YN ++
Sbjct: 88 VFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVTPNVIIYNSAINS 147
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K + A++L+ M VG P V+ +++ + R G + F++M G PD
Sbjct: 148 CAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPD 207
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ Y I + G ++A L + T G PNV +Y+S+I G++ A +++
Sbjct: 208 VITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLR 267
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM---------VEKGKYIHLVSKFK 295
EM++ PN + YN + G+ EA +++R M V I SK
Sbjct: 268 EMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGD 327
Query: 296 RYK 298
R+K
Sbjct: 328 RWK 330
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 132/290 (45%), Gaps = 2/290 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWVYQQ 70
T+N I C + G ++ ++ + P SY++++ A G R + I+ + ++
Sbjct: 280 TYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAID-ILRE 338
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M G +P+ ++YN + A + G+ + LL EM +G + YN + KG++
Sbjct: 339 MPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQ 398
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
AL LL M VG +V +++ +D + K EMA G P+ VCY
Sbjct: 399 WKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNS 458
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
I + + E+A DL M T G P+VF+Y+S I ++ EA ++KEM + G
Sbjct: 459 AIDACGRGDQWEEAVDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAG 518
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
P+ + YN+ + G+ A ++ M G +++S C
Sbjct: 519 LAPDLICYNSAIDACSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDAC 568
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 126/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T+ I C G ++ V K P SY++++ A Q
Sbjct: 199 MRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQ 258
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K+ + ++M AP+I+TYN + A + G+ + LL EM G PD +Y+
Sbjct: 259 WKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSS 318
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ KGD+ A+++L M VG P+ + + + +D ++ G K EM G
Sbjct: 319 VIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAG 378
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
V+ Y I + + ++A L M T G VF+Y+S I + +A
Sbjct: 379 VTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAK 438
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM + G PN + YN+ + + EA +++R M G
Sbjct: 439 ELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVG 483
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 128/289 (44%), Gaps = 2/289 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWVYQQM 71
+N I +C + G V + P SY++ + A G R + +E +++ M
Sbjct: 141 YNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISACGRGGRWEEALE-LFEDM 199
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G APD++TY + A G+ + LL ++ G +P+ +Y+ ++ K +
Sbjct: 200 RTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQW 259
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL+LL MK + P+++ + +D ++ G EM G PDVV Y+ +
Sbjct: 260 KIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSV 319
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + ++A D+ M T G PN +YNS I G++ EA +++EM + G
Sbjct: 320 IDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGV 379
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
+ YN+ ++ + EA ++R M G + + S C
Sbjct: 380 TQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDAC 428
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/292 (22%), Positives = 130/292 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G ++ +I C + G + V ++ P SY A ++A +
Sbjct: 59 MPTEGAAPDLSAYSAVIDACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGR 118
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K+ + ++M P+++ YN + + + G+ + L+ EM G +PD +Y+
Sbjct: 119 WKIALDLLREMLARDVTPNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSS 178
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ G+G + AL L M+ G P V+ + + + + G ++ G
Sbjct: 179 AISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGRWKEAVSLLRKIPTVG 238
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V+ Y+ +IT+ G+ + A DL M PN+ TYN+ I G++ EA
Sbjct: 239 LTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNAAIDACAKGGRWKEAI 298
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++EM + G P+ + Y++++ + EA +++R M G + +S
Sbjct: 299 DLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAIS 350
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G +++ I CG G + +E F + P +Y + + A +
Sbjct: 164 MATVGLAPDVISYSSAISACGRGGRWEEALELFEDMRTSGVAPDVITYGSAIAACANGGR 223
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K + +++ G P++++Y+ V+ A + G+ LL EM +P+ TYN
Sbjct: 224 WKEAVSLLRKIPTVGLTPNVISYSSVITACAKEGQWKIALDLLREMKAMRLAPNIITYNA 283
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ KG + A++LL M VG P V+ +++++D S+ EM G
Sbjct: 284 AIDACAKGGRWKEAIDLLREMPTVGLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVG 343
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + Y I + G+ ++A+ L M T G V YNS I ++ EA
Sbjct: 344 LSPNAISYNSAIDACAKGGQWKEAKGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEAL 403
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++EM + G + Y++ + +A E++R M G
Sbjct: 404 ALLREMPTVGLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVG 448
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 116/281 (41%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G P +++ +I C + ++ ++ + P SYN+ + A Q+K
Sbjct: 308 GLPPDVVSYSSVIDACSKGDRWKEAIDILREMPTVGLSPNAISYNSAIDACAKGGQWKEA 367
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ + ++M G ++ YN + A + + + LL EM G +Y+ +
Sbjct: 368 KGLLREMPTAGVTQRVIGYNSAIAACAKGEQWKEALALLREMPTVGLHTTVFSYSSAIDA 427
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GKG+ + A LL M VG P+ + + + +D R + EM G PD
Sbjct: 428 CGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEAVDLLREMPTVGLSPD 487
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y+ I + + ++A + M G P++ YNS I G++ A ++
Sbjct: 488 VFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLG 547
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + G PN + Y++ + G+ E ++ M G
Sbjct: 548 EMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSG 588
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 1/190 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G TT +++ I CG+ L K E + P + YN+ + A Q++
Sbjct: 413 GLHTTVFSYSSAIDACGKGNLWIKAKELLREMATVGLAPNEVCYNSAIDACGRGDQWEEA 472
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ ++M G +PD+ +Y+ + A + + + +L EM +G +PD YN +
Sbjct: 473 VDLLREMPTVGLSPDVFSYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDA 532
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
KG + A+ LL M+ G P+++ +++ +D R G +EM G +PD
Sbjct: 533 CSKGGRWKMAVALLGEMRAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPD 592
Query: 185 VVCY-TVMIT 193
V+ Y +M+T
Sbjct: 593 VITYHALMVT 602
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 1/168 (0%)
Query: 134 ALNLLNHMKEV-GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
AL ++ MK++ G+ + + R G + EM +G PD+ Y+ +I
Sbjct: 16 ALRAVDGMKKLPGWLIDQKSYCMAITACGRGGQWEQAVRLLREMPTEGAAPDLSAYSAVI 75
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ G+ + A M TKG P+ +Y + I G++ A +++EM +R
Sbjct: 76 DACAKGGQWKMAVFFLMEMPTKGIAPDARSYGAAINACARGGRWKIALDLLREMLARDVT 135
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
PN ++YN+ +++ AG+ A +++ M G ++S C
Sbjct: 136 PNVIIYNSAINSCAKAGQWEIAVSLVKEMATVGLAPDVISYSSAISAC 183
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+++ I C + ++ + + P YN+ + A ++K+ + +M
Sbjct: 490 SYSSAIAACAKGDQWKEALAVLKEMSAAGLAPDLICYNSAIDACSKGGRWKMAVALLGEM 549
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
G P+I++Y+ + A R G+ + LL+EM SG PD TY+ L+ K D
Sbjct: 550 RAAGLTPNIISYSSAIDACVRGGQWKEGIALLEEMRGSGVVPDVITYHALMVTCAKYD 607
>gi|116310235|emb|CAH67244.1| OSIGBa0140O07.12 [Oryza sativa Indica Group]
Length = 581
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 138/272 (50%), Gaps = 2/272 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-RQYKL 63
G+ AR + L+ +C L K+ F R +YN ++ +L+G R + +
Sbjct: 173 GYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAYNKLMSSLIGRGRVHDV 232
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ + + D Y+PD+ ++N+V+ R+G++ + L++ M G SPD T+NI++
Sbjct: 233 VALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMNEFGCSPDTVTHNIIVD 292
Query: 124 VLGKGDKPLAALNLLNHMKEVGFD-PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + ++ +L ++ G P+V+ FT+++ G +AG L+ +++M G M
Sbjct: 293 GLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIM 352
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ V Y V+I Y G+L A +++ M P+V T++S+I G+C G+ D+A +
Sbjct: 353 PNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRI 412
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+M PN ++ ++ +L + EA
Sbjct: 413 WSDMAQHRIQPNVYTFSIIIHSLCKQNRSDEA 444
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 8/279 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
+FN++I C G+V A ++VER + F P ++N I+ L + V
Sbjct: 251 SFNVVIKGVCRVGQVQKALELVERMNE---FGCSPDTVTHNIIVDGLCRTNEVSRGHEVL 307
Query: 69 QQMSDEGYA-PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+++ +G P+++T+ V+ + GKL+ + ++M SG P+ TYN+L++ GK
Sbjct: 308 RRLQRDGVCMPNVVTFTSVISGYCKAGKLEDAMAVYNDMVASGIMPNTVTYNVLINGYGK 367
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+A+ + M + P V+ F++L+DG R G LD + +MA P+V
Sbjct: 368 VGDLGSAVEVYQQMTRLRCPPDVVTFSSLIDGYCRCGQLDDALRIWSDMAQHRIQPNVYT 427
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
++++I S ++A L + + + + P F YN +I C GK DEA + K M
Sbjct: 428 FSIIIHSLCKQNRSDEAIRLLNELNLRPDIAPQAFIYNPVIDVLCKCGKVDEANLIRKGM 487
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E +GC P+ Y L+ +++EA MVE G
Sbjct: 488 EEKGCRPDKYTYTILIIGYCMKSRISEAIMFFHEMVEAG 526
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 59 RQYKLIEWVYQQMSDEGYAPD--ILTYNIVMC--------AKYRLGKLDQF--------- 99
RQ ++ Q + GY+PD L++ + C + L K +F
Sbjct: 157 RQADALQLFDQMTTHYGYSPDARFLSFLVSSCTCANLLDASATLLSKASEFGCRVEAYAY 216
Query: 100 HRLLDEMGRSG-----------------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
++L+ + G +SPD ++N+++ + + + AL L+ M
Sbjct: 217 NKLMSSLIGRGRVHDVVALFERWIQDRLYSPDVWSFNVVIKGVCRVGQVQKALELVERMN 276
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGEL 201
E G P + ++DGL R + + G CMP+VV +T +I+ Y AG+L
Sbjct: 277 EFGCSPDTVTHNIIVDGLCRTNEVSRGHEVLRRLQRDGVCMPNVVTFTSVISGYCKAGKL 336
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A +++ M+ G +PN TYN +I G+ G A + ++M C P+ + +++L
Sbjct: 337 EDAMAVYNDMVASGIMPNTVTYNVLINGYGKVGDLGSAVEVYQQMTRLRCPPDVVTFSSL 396
Query: 262 VSNLRNAGKLAEAHEVIRHMVE 283
+ G+L +A + M +
Sbjct: 397 IDGYCRCGQLDDALRIWSDMAQ 418
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 110/244 (45%), Gaps = 51/244 (20%)
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
+GK D+ +L+ EM R GF PD TY+ ++ L K A L MK VG P V
Sbjct: 435 VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 494
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF---- 208
+T L+D +AG ++ ++ F+EM + GC P VV YT +I +Y+ A ++ +A D+F
Sbjct: 495 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMV 554
Query: 209 ---------------DGMITKGQL--------------------------------PNVF 221
DG+ G + PNV
Sbjct: 555 DAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 614
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY +++ G C A K D A ++ M S GC PN +VY+ L+ AGK+ A EV M
Sbjct: 615 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 674
Query: 282 VEKG 285
+ G
Sbjct: 675 TKCG 678
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 126/277 (45%), Gaps = 16/277 (5%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+ ILI + + GL + F + + P +Y A++HA L +Q
Sbjct: 487 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 546
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM----------------GR 108
++ +M D G P+ +TY ++ + G + + + ++ R
Sbjct: 547 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 606
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+P+ TY L+ L K K A LL+ M G +P+ + + L+DG +AG +D+
Sbjct: 607 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 666
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
+ F +M G +P V YT +I G L+ A + M+ PNV TY +MI
Sbjct: 667 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 726
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
G C G+ ++A ++ ME +GC+PN + Y L+ L
Sbjct: 727 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 143/330 (43%), Gaps = 52/330 (15%)
Query: 14 NILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD 73
N C CG VG K + + F P ++Y+ ++ L + + ++Q+M
Sbjct: 427 NFARCLCG-VGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKM 485
Query: 74 EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA 133
G PD+ TY I++ + + G ++Q L +EM G SP TY L+H K +
Sbjct: 486 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 545
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-----------------DACKYF---- 172
A ++ + M + G P+ + + L+DGL +AGN+ D+ YF
Sbjct: 546 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 605
Query: 173 ------------------------------FDEMANKGCMPDVVCYTVMITSYIAAGELE 202
D M + GC P+ + Y +I + AG+++
Sbjct: 606 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 665
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
AQ++F M G LP+V TY S+I G+ D A ++ +M C PN + Y ++
Sbjct: 666 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 725
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L G+ +A +++ M EKG ++V+
Sbjct: 726 DGLCRIGESEKALKLLSLMEEKGCSPNVVT 755
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 121/282 (42%), Gaps = 9/282 (3%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
R N+L+ C G+ + +E + K F +RP K +YNA++ L Q L V +
Sbjct: 174 GRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQK 233
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+MS+ G+ D T V C + L K ++ LD + R F D ++ L +
Sbjct: 234 EMSESGFCMDRFT---VGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEAS 290
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A++ L+ M+ P+V+ + TL+ G + L CK + M +GC P+ +
Sbjct: 291 YFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFN 350
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK------FDEACTMM 243
++ SY + A L + M T G P YN I C K D A +
Sbjct: 351 SLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIY 410
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + C N + L GK +A ++I+ M+ KG
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKG 452
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 117/253 (46%), Gaps = 14/253 (5%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y +L L +Q + + M EG P+ +N ++ + ++L
Sbjct: 309 PNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKL 368
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD----------PSVLH 152
L+ M G P + YNI + + G + L + +LL+ +++ + +V +
Sbjct: 369 LNRMTTCGCPPGYVVYNIFIGSIC-GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 427
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
F + G+ G D EM KG +PD Y+ +IT A ++EKA LF M
Sbjct: 428 FARCLCGV---GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMK 484
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
G P+V+TY +I FC AG ++A + +EM S GC+P + Y L+ A ++
Sbjct: 485 MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVP 544
Query: 273 EAHEVIRHMVEKG 285
+A+++ MV+ G
Sbjct: 545 QANDIFHRMVDAG 557
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C +V A ++++ + S P Y+A++ + + V+ QM+ GY
Sbjct: 623 LCKAHKVDHAHELLDAMLSS---GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY 679
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
P + TY ++ ++ G+LD ++L +M + +P+ TY ++ L + + AL
Sbjct: 680 LPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALK 739
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRA 163
LL+ M+E G P+V+ +T L+DGL ++
Sbjct: 740 LLSLMEEKGCSPNVVTYTALIDGLGQS 766
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 6/130 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G ++ LI C G++ A++V F++ + P ++Y +++ +
Sbjct: 639 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEV---FLQMTKCGYLPSVHTYTSLIDRMFK 695
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L V QM + P+++TY ++ R+G+ ++ +LL M G SP+ T
Sbjct: 696 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 755
Query: 118 YNILLHVLGK 127
Y L+ LG+
Sbjct: 756 YTALIDGLGQ 765
>gi|384251704|gb|EIE25181.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 905
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 116/229 (50%)
Query: 46 NSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
++Y A+++ + L Y M +G P+++TYN ++ ++G +Q ++L
Sbjct: 246 HTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTL 305
Query: 106 MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
M G P TYN L+ +P A+ + M + G+ P+ + L+ +AG
Sbjct: 306 MKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQ 365
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
LD F EM +KGC V+ Y+ +I++ AG+ E A +LF+ M +G +PN TYNS
Sbjct: 366 LDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNS 425
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+I ++++A + ++M+ GC P+ + + L+S+ G+ A
Sbjct: 426 LITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRA 474
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 114/225 (50%), Gaps = 13/225 (5%)
Query: 71 MSDEGYAPDILTYNIV-----MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
M EG P + TYN + MC + R + + R+LDE G+SP+ TYN L+
Sbjct: 306 MKTEGVEPVLRTYNTLIIACNMCGQPREA-MAVYKRMLDE----GYSPNATTYNALISAY 360
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
GK + + + M G + SV+ +++L+ +AG + F+EMA +GC+P+
Sbjct: 361 GKAGQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNT 420
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +IT+ + EKA ++F+ M G P+V T+ ++I + G++ A ++
Sbjct: 421 VTYNSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQ 480
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKL---AEAHEVIRHMVEKGKY 287
M + C P+ +V+N ++ L G + +A + + VE G +
Sbjct: 481 MRLQRCKPDAIVFNAIIDTLWETGVIWAQRKALALFQQAVEDGHF 525
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 110/227 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G T+N LI G++GL + ++ K P +YN ++ A Q
Sbjct: 271 MRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMCGQ 330
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ VY++M DEGY+P+ TYN ++ A + G+LD+ + EM G TY+
Sbjct: 331 PREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKGCERSVITYSS 390
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K + AL L N M G P+ + + +L+ ++ + F++M G
Sbjct: 391 LISACEKAGQWELALELFNEMAGEGCIPNTVTYNSLITACAQGAQWEKASEVFEQMQKGG 450
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
C PDVV +T +I+SY G+ +A ++ M + P+ +N++I
Sbjct: 451 CTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQRCKPDAIVFNAII 497
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 106/224 (47%), Gaps = 6/224 (2%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
++ TY +M + G + M + G P+ TYN L+ V GK + +L
Sbjct: 244 NVHTYTALMNVCIKCGNCPLALDTYNHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVL 303
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
MK G +P + + TL+ + G + M ++G P+ Y +I++Y A
Sbjct: 304 TLMKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKA 363
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G+L+K ++F M+ KG +V TY+S+I AG+++ A + EM GC PN + Y
Sbjct: 364 GQLDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTY 423
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKR 296
N+L++ + +A EV M + G + L+S +++
Sbjct: 424 NSLITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEK 467
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 3/218 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G RT+N LI C G R+ + + + + P +YNA++ A Q
Sbjct: 306 MKTEGVEPVLRTYNTLIIACNMCGQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQ 365
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+Q+M +G ++TY+ ++ A + G+ + L +EM G P+ TYN
Sbjct: 366 LDKVMEVFQEMVHKGCERSVITYSSLISACEKAGQWELALELFNEMAGEGCIPNTVTYNS 425
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +G + A + M++ G P V+ FT L+ + G +++M +
Sbjct: 426 LITACAQGAQWEKASEVFEQMQKGGCTPDVVTFTALISSYEKGGQWRRALGAYEQMRLQR 485
Query: 181 CMPDVVCYTVMITSYIAAGEL---EKAQDLFDGMITKG 215
C PD + + +I + G + KA LF + G
Sbjct: 486 CKPDAIVFNAIIDTLWETGVIWAQRKALALFQQAVEDG 523
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +TY ++ + A++L M+ + +V +T LM+ + GN +
Sbjct: 209 DVYTYTAMISMCIYQQDVDRAMDLAKEMRVRNIERNVHTYTALMNVCIKCGNCPLALDTY 268
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ M G P+VV Y +I Y G E+ + M T+G P + TYN++I M
Sbjct: 269 NHMRQDGACPNVVTYNTLIDVYGKMGLWEQGIKVLTLMKTEGVEPVLRTYNTLIIACNMC 328
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ EA + K M G +PN YN L+S AG+L + EV + MV KG
Sbjct: 329 GQPREAMAVYKRMLDEGYSPNATTYNALISAYGKAGQLDKVMEVFQEMVHKG 380
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 148/321 (46%), Gaps = 44/321 (13%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG + +I C G+VG A +V R ++ + RP +Y+++++ L+
Sbjct: 360 MFANGLAPNVVIYTSIIDGYCKVGKVGAALEVF-RLMEHE--GCRPNAWTYSSLIYGLIQ 416
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + +M ++G P ++TY ++ + + + D RL + M ++G +PD
Sbjct: 417 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 476
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN+L H L K + A + L G + + +T+L+DG S+AGN D ++M
Sbjct: 477 YNVLTHALCKSGRAEEAYSFLVRK---GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 533
Query: 178 NKGCMPD-----------------------------------VVCYTVMITSYIAAGELE 202
N+GC D +V YT++I+ I G+ +
Sbjct: 534 NEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHD 593
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
A+ +F+ MI+ G P+ TY I +C G+ +EA ++ EME G P+ + YN +
Sbjct: 594 HAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFI 653
Query: 263 SNLRNAGKLAEAHEVIRHMVE 283
+ + G + A ++ M++
Sbjct: 654 NGCGHMGYMDRAFSTLKRMID 674
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G T+ LI C E A ++ E ++ L P + +YN + HAL
Sbjct: 430 MQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL---TPDEQAYNVLTHALC- 485
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E Y + +G +TY ++ + G D L+++M G D +T
Sbjct: 486 --KSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYT 543
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++LL L K K AL++L+ M G +++ +T ++ + + G D K F+EM
Sbjct: 544 YSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMI 603
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P YTV I+SY G++E+A+ L M G P+V TYN I G G D
Sbjct: 604 SSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMD 663
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
A + +K M C PN+ Y L+ + L +AH V
Sbjct: 664 RAFSTLKRMIDASCEPNYWTYWILLKHFLKM-SLVDAHYV 702
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 145/340 (42%), Gaps = 51/340 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G T+ +LI C G + AR+V+E L P +YNA++
Sbjct: 186 MVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEM---PLRGVVPSVWTYNAMIDGYCK 242
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSP- 113
+ K + M G PD TYNI+ +C + K D+ LL++ GF+P
Sbjct: 243 SGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE----KPDEAEELLNDAIVRGFTPT 298
Query: 114 ----------------------------------DFHTYNILLHVLGKGDKPLAALNLLN 139
D Y +L++VL K + A ++
Sbjct: 299 VITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVS 358
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
M G P+V+ +T+++DG + G + A F M ++GC P+ Y+ +I I
Sbjct: 359 EMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQ 418
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
+L KA L M G P V TY ++I+G C +FD A + + ME G P+ YN
Sbjct: 419 KLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYN 478
Query: 260 TLVSNLRNAGKLAEAHE-VIRH--MVEKGKYIHLVSKFKR 296
L L +G+ EA+ ++R ++ K Y LV F +
Sbjct: 479 VLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSK 518
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 136/294 (46%), Gaps = 9/294 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
I GF T TF +I C + A +V + S N + +Y +++ L+
Sbjct: 291 IVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSS---NCKLDLQAYGVLINVLIKK 347
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++K + +M G AP+++ Y ++ ++GK+ + M G P+ TY
Sbjct: 348 CRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTY 407
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
+ L++ L + K A+ L+ M+E G P V+ +TTL+ G + D F+ M
Sbjct: 408 SSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQ 467
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G PD Y V+ + +G +A++ + ++ KG + TY S++ GF AG D
Sbjct: 468 NGLTPDEQAYNVLTHALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDF 524
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A ++++M + GC + Y+ L+ L KL EA ++ M G ++V+
Sbjct: 525 AAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVA 578
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 34/296 (11%)
Query: 24 GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
G RK + L R + SY ++ L R + + M +G + ++ TY
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK---------------- 127
+++ + G++ R+L+EM G P TYN ++ K
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258
Query: 128 ------------------GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC 169
G+KP A LLN GF P+V+ FT +++G +A +D
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDA 318
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
M + C D+ Y V+I I ++A++ M G PNV Y S+I G
Sbjct: 319 LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDG 378
Query: 230 FCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+C GK A + + ME GC PN Y++L+ L KL +A +I M E G
Sbjct: 379 YCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 434
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 130/313 (41%), Gaps = 26/313 (8%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++ G T T+ L+ G A ++E+ + + +Y+ +L AL
Sbjct: 497 LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE---GCKADSYTYSVLLQAL-- 551
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+Q KL E + QM+ G +I+ Y I++ + GK D + +EM SG P
Sbjct: 552 CKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 611
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY + + K + A +L+ M+ G P V+ + ++G G +D
Sbjct: 612 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKR 671
Query: 176 MANKGCMPDVVCYTVMITSYIAAG----------------ELEKAQDLFDGMITKGQLPN 219
M + C P+ Y +++ ++ EL+ L + M+ G P
Sbjct: 672 MIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPT 731
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
TY+S+I GFC A + +EAC + M + +PN +Y L+ + +A +
Sbjct: 732 AVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 791
Query: 280 HMVEKGKYIHLVS 292
M+E G HL S
Sbjct: 792 DMIEFGFQPHLES 804
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 16/259 (6%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y I+ ++ ++ + ++ +M G+ P TY + + + ++G++++ L+ EM
Sbjct: 578 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM 637
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLM--------- 157
R G +PD TYN+ ++ G A + L M + +P+ + L+
Sbjct: 638 ERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLV 697
Query: 158 -------DGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
G+ LD + M G P V Y+ +I + A LE+A LFD
Sbjct: 698 DAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDH 757
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M K PN Y +I+ C F +A + + +M G P+ Y+ L+ L + G
Sbjct: 758 MRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGD 817
Query: 271 LAEAHEVIRHMVEKGKYIH 289
+A + ++ Y H
Sbjct: 818 YDKAKSLFCDLLGMEDYNH 836
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 112/280 (40%), Gaps = 52/280 (18%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +Y + + I Q + E + +M +G APD++TYN+ + +G +D+
Sbjct: 608 KPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFS 667
Query: 102 LLDEMGRSGFSPDFHTYNILL------------HVLGKGDKPLAALN----LLNHMKEVG 145
L M + P++ TY ILL +V G L+ LL M + G
Sbjct: 668 TLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHG 727
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+P+ + +++++ G +A L+ FD M K P+ YT++I KA
Sbjct: 728 LNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAV 787
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA-------------------------- 239
MI G P++ +Y+ +I G C G +D+A
Sbjct: 788 SFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDG 847
Query: 240 ---------CT-MMKEMESRGCNPNFLVYNTLVSNLRNAG 269
C+ ++ ME+R C + Y+ + N+ A
Sbjct: 848 LLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNIHEAS 887
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 88/248 (35%), Gaps = 53/248 (21%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL---- 56
M +G T+N+ I CG +G + + + P +Y +L L
Sbjct: 637 MERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSL 696
Query: 57 ---------GIRQYKLIEWVYQ---QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
G+ + ++ V+Q +M G P +TY+ ++ + +L++ L D
Sbjct: 697 VDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFD 756
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV-------------- 150
M SP+ Y +L+ A++ + M E GF P +
Sbjct: 757 HMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEG 816
Query: 151 ----------------------LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + L DGL +AG++D C M N+ C D Y
Sbjct: 817 DYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETY 876
Query: 189 TVMITSYI 196
+ M+T I
Sbjct: 877 S-MVTDNI 883
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 122/241 (50%)
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
K + N + + + Q + V+ + PD+ +Y I++ ++ +D+ L +
Sbjct: 275 KETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFN 334
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM G +PD TY+ L+ L K ++ A LL+ M G V+ +T+ + L +
Sbjct: 335 EMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNH 394
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+D ++ ++G P++ Y ++I G E AQ +F ++ KG V+TYN
Sbjct: 395 QVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYN 454
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
MI G C+ G FDEA T++++ME GC P+ + Y T++ L + +A +++R M+ +
Sbjct: 455 IMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMIAR 514
Query: 285 G 285
G
Sbjct: 515 G 515
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQ--YKLIEWVYQQMSDEGYAPDILTYNIVM 87
+ F + N P +N IL +L+ Y + +Y ++ P I+T+N V+
Sbjct: 31 ISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVI 90
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
LG++D +L ++ + G+ PD T L+ L K AL+ +H+ GF
Sbjct: 91 NCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFR 150
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
+ + + L++GL + G A ++ K +VV Y+ +I S + +A +L
Sbjct: 151 LNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYEL 210
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+ MI K P+V T++++I GFCM G+F EA + EM NP+ +N LV L
Sbjct: 211 YSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCK 270
Query: 268 AGKLAEAHEVIRHMVEK 284
G E V+ M+++
Sbjct: 271 EGSTKETKNVLAVMMKE 287
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 35/245 (14%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
+T T N+L EV K F P +SY I+ L I+ +
Sbjct: 273 STKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSL 332
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+ +M +G PD +TY+ ++ + ++ LLD+M G D TY LH L K
Sbjct: 333 FNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCK 392
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF-------------- 173
+ A+ L+ +K+ G P++ + L+DGL + G + + F
Sbjct: 393 NHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWT 452
Query: 174 ---------------------DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
++M + GC PDVV Y +I + E KA+ L MI
Sbjct: 453 YNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDENHKAEKLLREMI 512
Query: 213 TKGQL 217
+G L
Sbjct: 513 ARGLL 517
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 114/216 (52%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M G+ PDI+T+ ++ ++++ ++++M G PD Y ++ L K
Sbjct: 132 KMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNG 191
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
AL+L + M+ G P V+ +T+L++GL +G M + PDV+ +
Sbjct: 192 HVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFN 251
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I +++ G+ A++L++ MI PN+FTY S+I GFCM G DEA M ME++
Sbjct: 252 ALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
GC P+ + Y +L++ K+ +A ++ M +KG
Sbjct: 312 GCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 8/278 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL-LGIRQYKLIEWV 67
T N+L+ C + LA + + +K F P ++ ++++ LG R + + V
Sbjct: 109 TCNLLMNCFCQSSQPYLASSFLGKMMK---LGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
QM + G PD++ Y ++ + + G ++ L D+M G PD Y L++ L
Sbjct: 166 -NQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A +LL M + P V+ F L+D + G + ++EM P++
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT +I + G +++A+ +F M TKG P+V Y S+I GFC K D+A + EM
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G N + Y TL+ GK A EV HMV +G
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 1/244 (0%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F R F N Y IL L Q+ ++ M + P I+ + ++ ++ K D
Sbjct: 32 FWVRAFCN-YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L D + G S D +T N+L++ + +P A + L M ++GF+P ++ FT+L++
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G ++ ++M G PDVV YT +I S G + A LFD M G P
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRP 210
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+V Y S++ G C +G++ +A ++++ M R P+ + +N L+ GK +A E+
Sbjct: 211 DVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELY 270
Query: 279 RHMV 282
M+
Sbjct: 271 NEMI 274
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 129/287 (44%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ GF TF LI C + A +V + ++ +P Y I+ +L
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE---MGIKPDVVMYTTIIDSLCK 189
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ QM + G PD++ Y ++ G+ LL M + PD T
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVIT 249
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ K K L A L N M + P++ +T+L++G G +D + F M
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
KGC PDVV YT +I + +++ A +F M KG N TY ++I+GF GK +
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A + M SRG PN YN L+ L GK+ +A + M ++
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 136/287 (47%), Gaps = 3/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E G + +I + + G + F + + + RP Y ++++ L +
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + + + M+ PD++T+N ++ A + GK L +EM R +P+ TY
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ A + M+ G P V+ +T+L++G + +D F EM+ KG
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + YT +I + G+ AQ++F M+++G PN+ TYN ++ C GK +A
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 241 TMMKEMESR---GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ ++M+ R G PN YN L+ L GKL +A V M ++
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR 454
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 131/307 (42%), Gaps = 41/307 (13%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G A ++ K K+ +P ++NA++ A + ++ E +Y +M
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKI---KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
AP+I TY ++ G +D+ ++ M G PD Y L++ K K A+
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M + G + + +TTL+ G + G + + F M ++G P++ Y V++
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 197 AAGELEKAQDLFDGMITK---GQLPNVFTYNSMI-------------------------- 227
G+++KA +F+ M + G PN++TYN ++
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458
Query: 228 ---------RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+G C AGK A + + S+G PN + Y T++S L G EAH +
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518
Query: 279 RHMVEKG 285
R M E G
Sbjct: 519 RKMKEDG 525
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 3/190 (1%)
Query: 98 QFHRLLD---EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFT 154
QF+ LD M S P + LL+V+ K K +NL +H++ +G +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 155 TLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITK 214
LM+ ++ F +M G PD+V +T +I + +E+A + + M+
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 215 GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
G P+V Y ++I C G + A ++ +ME+ G P+ ++Y +LV+ L N+G+ +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 275 HEVIRHMVEK 284
++R M ++
Sbjct: 232 DSLLRGMTKR 241
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA---ALNLLNHMKEVGFDPSV 150
GK F RLLD S + F Y +L G L AL+L HM E PS+
Sbjct: 19 GKALSFSRLLD---LSFWVRAFCNYR---EILRNGLHSLQFNEALDLFTHMVESRPLPSI 72
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ FT L++ +++ D D + G D+ +++ + + + A
Sbjct: 73 IDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGK 132
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M+ G P++ T+ S+I GFC+ + +EA +M+ +M G P+ ++Y T++ +L G
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192
Query: 271 LAEAHEVIRHMVEKG 285
+ A + M G
Sbjct: 193 VNYALSLFDQMENYG 207
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 49/310 (15%)
Query: 25 LARKVVERFIKSKLFNFRPFK--------------NSYNAILHALLGIRQYKLIEWVYQQ 70
+A +V+ER + + +R F+ SY+ ++ +L IRQY+L+ V
Sbjct: 70 VAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAV 129
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQ-------------------FHRLLDEMGRSG- 110
M EG A ++ T++I+M R K D+ F+ LL + +S
Sbjct: 130 MRKEGVA-NVETFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLLGALCKSKN 188
Query: 111 --------------FSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
FSPD TY+ILL G+ + + M G P ++ + +
Sbjct: 189 VRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIM 248
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+D L + G ++ +M+++GC P Y+V++ +Y +E A F M G
Sbjct: 249 VDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGI 308
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
+P+V YN+++ FC KFD A +M +ME G +PN +N +++ L + GK EA+
Sbjct: 309 VPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYR 368
Query: 277 VIRHMVEKGK 286
V R+M+++ K
Sbjct: 369 VFRNMIKRCK 378
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 126/287 (43%), Gaps = 5/287 (1%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+ N F A+T++IL+ G K+ E + +P +Y ++ AL +
Sbjct: 199 MNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRV 258
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V Q MS G P Y++++ +++ +M + G PD YN L
Sbjct: 259 EEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNAL 318
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K K A +++ M+ G P+ + +++ L G D F M K C
Sbjct: 319 VTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMI-KRC 377
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD YT+MI + ++E A ++ M K LP++ T++ +I G C G+ +AC
Sbjct: 378 KPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACV 437
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
++++M +G P + L L G+ +V+ +VEK K +
Sbjct: 438 LLEDMIEKGIRPPGSTFGKLRQLLLKEGR----KDVLDFLVEKMKML 480
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 1/183 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T +++L+ T G V F+ + P YNA++ A +++
Sbjct: 268 MSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKK 327
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V M G +P+ T+NI++ LGK D+ +R+ M + PD TY +
Sbjct: 328 FDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKR-CKPDSDTYTM 386
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ + + DK AL + +M+ F PS+ F+ L++GL G + ++M KG
Sbjct: 387 MIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKG 446
Query: 181 CMP 183
P
Sbjct: 447 IRP 449
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 129/285 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T T+ + I + ++G + P +Y AI+ L +
Sbjct: 293 MTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGK 352
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+L +Y +M EG P+ +TYN ++ G+ ++ D M G + TYN
Sbjct: 353 MELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L D A+ + N M + G P+V+ + TL+ + G L+ F M
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD Y +I+ + G+L+ A F M+ G PN +TY +MI G+C GK D A
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + ME GC+ + YN ++S L + +EA + M E+G
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 133/305 (43%), Gaps = 10/305 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
M++ G T+N LI CT G G+A K+ + L N + +YN I+ L
Sbjct: 363 MLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQ----TYNQIIKGLF 418
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
G+ + V+ +M +G +P ++TYN ++ + G L+ R L M S PD
Sbjct: 419 GMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDER 478
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L+ KG K +A + M + G P+ +T ++DG + G +D F+ M
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERM 538
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
GC + Y +I+ +A+ M +G PN TY S+I G C
Sbjct: 539 EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTAT 598
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK--GKYIHLVSKF 294
+ A + EME + C PN Y +L+ L GK+ A + + E Y LVS
Sbjct: 599 NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDTYSTLVSGL 658
Query: 295 KRYKR 299
R R
Sbjct: 659 CREGR 663
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
F T +FN L+ G+ + + + +P ++N +++ L + +
Sbjct: 158 FGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAV 217
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V+ ++ PD TY ++ R KLD+ + D M + G +P+ TY+ L++ L
Sbjct: 218 LVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGL 277
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ A+++L M E G +P+V +T + L G +D M KGC P V
Sbjct: 278 CNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
YT +I+ AG++E A ++ M+ +G +PN TYN++I C G+F A +
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW 397
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
ME G N YN ++ L + +A V M++ G +V+
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVT 444
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 133/290 (45%), Gaps = 4/290 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G T T+N LI + G K N P + +Y ++ +
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M G +P+ TY ++ + GK+D L + M +G S TYN
Sbjct: 493 LDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNA 552
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ L KG++ A M E G P+ + +T+L++GL + + F EM K
Sbjct: 553 IISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKN 612
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C+P+ YT +I G+++ A+ L + G P + TY++++ G C G+ +EA
Sbjct: 613 CLPNAHTYTSLIYGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEAS 668
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+++ M+ +G +P+ +Y +L+ + K+ A E+ M KG HL
Sbjct: 669 QLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHL 718
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+ +G + TFN +I + G ++ V F K F+ P +Y +++ R+
Sbjct: 188 IFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRK 247
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V+ +M +G P+ +TY+ ++ G++ + +L+EM G P +TY +
Sbjct: 248 LDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTV 307
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ L + A+NL+ M + G PSV +T ++ GL RAG ++ + +M +G
Sbjct: 308 PISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEG 367
Query: 181 CMPDVVCYTVMITSYIAAG-----------------------------------ELEKAQ 205
+P+ V Y +I G ++EKA
Sbjct: 368 LVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAM 427
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+F+ M+ G P V TYN++I G + A + M+ C P+ Y L+S
Sbjct: 428 VVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGF 487
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
GKL A M++ G
Sbjct: 488 CKGGKLDSATSFFYEMLKCG 507
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 18/277 (6%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLF-------NFRPFKNSYNAILH 53
M ENG + T+N +I GL++ RF +++ F +P +Y ++++
Sbjct: 538 MEENGCSASIETYNAIIS-----GLSKG--NRFSEAEKFCAKMTEQGLQPNTITYTSLIN 590
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L L ++ +M + P+ TY ++ + GK+D RL + +G P
Sbjct: 591 GLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE----NGCEP 646
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
TY+ L+ L + + A L+ +MKE G PS+ + +L+ ++ +D F
Sbjct: 647 TIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIF 706
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
+ MA KG P + Y V+I + E+A ++F ++ K ++ + ++ G
Sbjct: 707 NLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQE 766
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
G D + MESR C P+ Y L L GK
Sbjct: 767 GDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F+P Y ++ AL G+ + + ++Q + + + D++ + +++ + G D
Sbjct: 714 FQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCM 773
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+ L M +P HTY IL L K K + + N ++EV PS
Sbjct: 774 KFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLREVSL-PS 821
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 130/258 (50%), Gaps = 3/258 (1%)
Query: 31 ERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
E F +S + ++ S ++ ALL + +E++Y++M P++ T+N+V+ A
Sbjct: 174 EAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINAL 233
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGFD 147
+ GK+++ ++++M G+SP+ +YN L+ LG K A +L M E
Sbjct: 234 CKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVS 293
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P++ F L+DG + NL F EM ++ +P+V+ Y +I G++ +A +
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGM 353
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
D M++ G PN+ TY+S+I GFC G EA M ++ +G P +YN L+
Sbjct: 354 RDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCK 413
Query: 268 AGKLAEAHEVIRHMVEKG 285
GK+ + + M +G
Sbjct: 414 LGKIDDGFALKEEMEREG 431
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 132/264 (50%), Gaps = 10/264 (3%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L ++++ R I+ +F F N +++AL + V + M GY+P++++YN
Sbjct: 210 LYKEMIRRKIQPNVFTF-------NVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYN 262
Query: 85 IVMCAKYRLG---KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
++ +LG K+ + +L EM + SP+ T+NIL+ K D +L + M
Sbjct: 263 TLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEM 322
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ P+V+ + +L++GL G ++ D+M + G P+++ Y +I + G +
Sbjct: 323 LDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMM 382
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A D+FD + +G P YN +I +C GK D+ + +EME G P+ YN L
Sbjct: 383 KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
++ L G + A ++ + KG
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTNKG 466
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 137/292 (46%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+EN TFNILI + + KV + + + P +YN++++ L
Sbjct: 287 MVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVI---PNVITYNSLINGLCN 343
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M G P+++TY+ ++ + G + + + D + G P
Sbjct: 344 GGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRM 403
Query: 118 YNILLHV---LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
YN+L+ LGK D A L M+ G P V + L+ GL R GN++A K FD
Sbjct: 404 YNMLIDAYCKLGKIDDGFA---LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFD 460
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ NKG +PD+V + +++ Y + GE KA L M G P TYN M++G+C G
Sbjct: 461 QLTNKG-LPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEG 519
Query: 235 KFDEACTMMKEME-SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M +ME R N YN L+ GKL +A+ ++ M+EKG
Sbjct: 520 NLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKG 571
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 125/279 (44%), Gaps = 20/279 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEV----GLARKVVERFIKSKLFNFRPFKNSY--NAI 51
M++ T+N LI C G++ G+ K+V ++ L + N + N +
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381
Query: 52 LHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+ L + + + +G P YN+++ A +LGK+D L +EM R G
Sbjct: 382 MKEALDM---------FDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI 432
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD TYN L+ L + AA L + + G P ++ F LM+G G
Sbjct: 433 VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAM 491
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP-NVFTYNSMIRGF 230
EM+ G P + Y +M+ Y G L+ A ++ M + +L NV +YN +++G+
Sbjct: 492 LLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGY 551
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
GK ++A ++ EM +G PN + Y + + + G
Sbjct: 552 SQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 8/217 (3%)
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
D+L +++ LG + F R G G+ + L+ L K ++ L
Sbjct: 157 DMLVLAYANNSRFELG-FEAFKR----SGYYGYKLSAMSCKPLMVALLKQNRSADVEYLY 211
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI-- 196
M P+V F +++ L + G ++ + ++M G P+VV Y +I Y
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKL 271
Query: 197 -AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G++ KA + M+ PN+ T+N +I GF + + KEM + PN
Sbjct: 272 GGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNV 331
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ YN+L++ L N GK+ EA + MV G +L++
Sbjct: 332 ITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLIT 368
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 2/302 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TA T++ LI G + F + P +YN I+ I
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ QM G +P+++TYNI++ ++ G ++ RLL+ M +G D TY
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ +G K A +L N M E G P+V+ + +++G +D F +M G
Sbjct: 488 LISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESG 547
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P Y +MI+ + + +A++ M+ +G LPNV TY S I G C G+ A
Sbjct: 548 NVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAF 607
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG--KYIHLVSKFKRYK 298
+ EM+ R PN Y++L+ L G+ +A ++ E Y LV
Sbjct: 608 KIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKG 667
Query: 299 RC 300
RC
Sbjct: 668 RC 669
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 140/307 (45%), Gaps = 16/307 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFR--PFKNSYNAILHAL 55
M+ +G TFN +I C G+V A I +F++ P +Y +++
Sbjct: 193 MLNSGIRPNLFTFNAMIKILCNKGKVQEAE-----LIMGHIFHYGACPDTFTYTSLIIGH 247
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
L ++ +M +G P+ +TY+ ++ G+L++ +L+EM G P
Sbjct: 248 CKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTV 307
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
H Y I + L + A+ LL MK+ G P+V +T L+ GLSR G + + +
Sbjct: 308 HAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHK 367
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M G +P V Y+ +I G E A +F+ M++ LPN TYN +I+GFC G
Sbjct: 368 MLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGY 427
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIH 289
+A + +M G +PN + YN ++ G + A ++ M G Y +
Sbjct: 428 IQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYAN 487
Query: 290 LVSKFKR 296
L+S F R
Sbjct: 488 LISGFSR 494
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 135/292 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G +T+ LI G + + K P +Y+A+++ L +
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ +++ M P+ TYN+++ +G + + + D+M ++G SP+ TYNI
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++H+ K A+ LL MK G + L+ G SR G L+ F+EM G
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y +I Y+ +++ A LF M+ G +P+ TYN MI GF + EA
Sbjct: 513 ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAE 572
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+M +G PN + Y + + L G+ + A ++ M ++ + +L +
Sbjct: 573 NFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCT 624
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 97/202 (48%), Gaps = 13/202 (6%)
Query: 92 RLGKLDQFHRLLDEMGR--------SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
+LGK D +D +GR SG P+ T+N ++ +L K A ++ H+
Sbjct: 176 QLGKFD-----MDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFH 230
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P +T+L+ G + GNLD FD M GC P+ V Y+ +I + G LE+
Sbjct: 231 YGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEE 290
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A D+ + MI KG P V Y I C AG+ EA ++ +M+ RGC PN Y L+S
Sbjct: 291 AMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALIS 350
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L GK A V M+ G
Sbjct: 351 GLSRDGKFEVAIGVYHKMLADG 372
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 131/275 (47%), Gaps = 3/275 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G + LA ++ +R +K P +Y+A+++ L + + + ++M D+G
Sbjct: 248 CKNGNLDLAFEMFDRMVKD---GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIE 304
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P + Y I + + G+ + +LL +M + G P+ TY L+ L + K A+ +
Sbjct: 305 PTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGV 364
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
+ M G P+ + ++ L++ L G + F+ M + +P+ Y V+I + +
Sbjct: 365 YHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCS 424
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G ++KA +FD M+ G PNV TYN +I + G + A +++ M+ G +
Sbjct: 425 IGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWT 484
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y L+S GKL A + MVE G ++V+
Sbjct: 485 YANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVT 519
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 135/290 (46%), Gaps = 6/290 (2%)
Query: 6 FPTTARTFNILICTCGEV---GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
F T +F+ L+ G+ GL R V + S + RP ++NA++ L + +
Sbjct: 163 FGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGI---RPNLFTFNAMIKILCNKGKVQ 219
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E + + G PD TY ++ + G LD + D M + G P+ TY+ L+
Sbjct: 220 EAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALI 279
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ L + A+++L M + G +P+V +T + L AG +M +GC
Sbjct: 280 NGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCG 339
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+V YT +I+ G+ E A ++ M+ G +P TY+++I + G+F+ A T+
Sbjct: 340 PNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTI 399
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M S PN YN ++ + G + +A + M++ G ++++
Sbjct: 400 FEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVIT 449
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 139/320 (43%), Gaps = 46/320 (14%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILH------- 53
+ P T T+N++I C+ G + A + ++ +K+ P +YN I+H
Sbjct: 407 DSLPNT-ETYNVIIKGFCSIGYIQKATAIFDQMLKA---GPSPNVITYNIIIHIYFKQGY 462
Query: 54 --------ALLGIRQYKLIEWVY--------------------QQMSDEGYAPDILTYNI 85
++ KL W Y +M + G +P+++TYN
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA 522
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ + K+D L +M SG P TYN+++ K ++ A N M + G
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQG 582
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P+V+ +T+ +DGL + G F EM + P++ Y+ +I G+ E A+
Sbjct: 583 LLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE 642
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
L D G PNV TY +++RG C G+ EA +++ M+ +G P+ +Y L+
Sbjct: 643 RLLD----DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQ 698
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ A ++ MV G
Sbjct: 699 CKNLEVESALKIFDSMVTTG 718
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 4/281 (1%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
NG T+ LI G F + P +YNAI++ L + +
Sbjct: 476 NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDD 535
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
++ +M + G P TYN+++ + ++ + +M + G P+ TY +
Sbjct: 536 ALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFID 595
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K + A + + MK+ + P++ +++L+DGL + G + + D+ GC P
Sbjct: 596 GLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEP 651
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+V YT ++ G +A L + M KG P+ Y +++ G C + + A +
Sbjct: 652 NVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIF 711
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M + G P Y L+ L A +A + + M++K
Sbjct: 712 DSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKK 752
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 10/284 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G ++ T+N++I + A + +K L P +Y + + L
Sbjct: 543 MVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLL---PNVITYTSFIDGLCK 599
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L ++ +M Y P++ TY+ ++ + G+ + RLLD+ G P+ T
Sbjct: 600 NGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDT 655
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + A L+ MK+ G PS + L+ G + +++ FD M
Sbjct: 656 YTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMV 715
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P + Y +I + A +KAQ +F M+ K + + ++ G G+ D
Sbjct: 716 TTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETD 775
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ ++ MESR C NF L L G E ++ + +
Sbjct: 776 LSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQL 819
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 126/253 (49%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + + + V+ ++ G P ++++N +M RLG LD+ RL M
Sbjct: 139 FNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L N M + G P+ + FTTL+D + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ + +M ++G PD++ Y +I G+L++ + L D M G P+ TY ++I
Sbjct: 259 SAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y LVS L G+ +A ++ R M+
Sbjct: 319 DGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 379 PDNGTYTMIINEF 391
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNI++ C GE+ A+ V + K + RP S+N +++ +
Sbjct: 127 ILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITK---WGLRPSVVSFNTLMNGYIR 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D+ + L +EM G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ V K +A+ + M GF P ++ + TL+ GL + G+L + DEM+
Sbjct: 244 FTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMS 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD + YT +I G+LE A + MI + + Y +++ G C G+ D
Sbjct: 304 MNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRAD 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M +EM S G P+ Y +++ G + A +++ M G
Sbjct: 364 DAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDG 411
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 136/276 (49%), Gaps = 6/276 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ L+ E G ++ F +K F ++ +L L+ ++ +KL+ Y+++
Sbjct: 69 FSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYKEIL 128
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGD 129
+ GY + +NIVM + G++ + + D + + G P ++N L++ LG D
Sbjct: 129 ECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLD 188
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ L + M G P V ++ L++GL + +D F+EM ++G +P+ V +T
Sbjct: 189 E---GFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFT 245
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + G ++ A +++ M+++G P++ TYN++I G C G + ++ EM
Sbjct: 246 TLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN 305
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ + Y TL+ G L A E + M+++
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKES 341
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM +G++PD++TYN ++ + G L Q L+DEM +G PD TY L+
Sbjct: 263 IYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCC 322
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K A M + + +T L+ GL + G D + F EM + G PD
Sbjct: 323 KEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLSVGLKPDNG 382
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
YT++I + G++ A L M G +P V T
Sbjct: 383 TYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 75/189 (39%), Gaps = 6/189 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G TF LI C G V A ++ ++ + F P +YN +++ L
Sbjct: 232 MLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQ---GFSPDLITYNTLIYGLCK 288
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K + + +MS G PD +TY ++ + G L+ M + D
Sbjct: 289 KGDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVA 348
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L + + A + M VG P +T +++ + G++ EM
Sbjct: 349 YTALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQ 408
Query: 178 NKGCMPDVV 186
G +P VV
Sbjct: 409 RDGHVPCVV 417
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 153/343 (44%), Gaps = 68/343 (19%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++G + T+N L+ C G V A +++ F K + + K Y+ ++ L
Sbjct: 257 MKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDR---YVLDKQGYSCLIDGLFR 313
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+++ + Y++M++ PD++ Y I+M + GK RLL+EM G PD H
Sbjct: 314 ARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHC 373
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFD-------PSVLHFTTLMDGLSRAGNLDACK 170
YN L+ K L LL+ K + + S +T L+ G+ R+G + +
Sbjct: 374 YNALI-------KGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQ 426
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF---------------------- 208
F+EM GC P VV + +I + AG +EKAQ LF
Sbjct: 427 QIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRV 486
Query: 209 ---------------DGMITK-----------GQLPNVFTYNSMIRGFCMAGKFDEACTM 242
G+I K G PN+ TYN +I GFC AG + A +
Sbjct: 487 LDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKL 546
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
KE++ +G +P+ + Y TL++ L +A + +A V+ +++ G
Sbjct: 547 FKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNG 589
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 146/323 (45%), Gaps = 35/323 (10%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--------- 55
GF +A F +LI ++ + K VE F K F+ +P +YN +LH +
Sbjct: 121 GFSISADAFTVLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLA 180
Query: 56 LGI--RQYKL------------------------IEWVYQQMSDEGYAPDILTYNIVMCA 89
LGI R KL ++ +M+ P+ +TY I++
Sbjct: 181 LGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISG 240
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+ K D +RL M G PD TYN LLH K + AL LL + ++ +
Sbjct: 241 LCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLD 300
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
++ L+DGL RA + + ++ +M PDV+ YT+M+ AG+ + A L +
Sbjct: 301 KQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLN 360
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M +G +P+ YN++I+G+C G DEA ++ E+ C + Y L+ + +G
Sbjct: 361 EMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSG 420
Query: 270 KLAEAHEVIRHMVEKGKYIHLVS 292
+ +A ++ M + G Y +V+
Sbjct: 421 LVGDAQQIFNEMEKHGCYPSVVT 443
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 130/282 (46%), Gaps = 37/282 (13%)
Query: 41 FRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
FR ++ S+N I+ L+ ++L V +++ G++ + +++ A ++ +++
Sbjct: 85 FRRLRSWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEK 144
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+ M PD TYN +LHV+ + + L AL + N M ++ P++ F+ L+D
Sbjct: 145 AVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILID 204
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
G+ ++G FDEM + +P+ + YT++I+ A + + A LF M G +P
Sbjct: 205 GMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIP 264
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMK---------------------------------- 244
+ TYN+++ GFC G+ DEA ++K
Sbjct: 265 DSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWY 324
Query: 245 -EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+M P+ ++Y ++ L AGK +A ++ M E+G
Sbjct: 325 RKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERG 366
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 144/334 (43%), Gaps = 57/334 (17%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
N P A TF+ILI C G+ A ++ + + ++ P K +Y I+ L ++
Sbjct: 191 NCLPNIA-TFSILIDGMCKSGKTQNALQMFDEMTQRRIL---PNKITYTIIISGLCQAQK 246
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ-------FHR---LLDEMGRS- 109
+ ++ M D G PD +TYN ++ +LG++D+ F + +LD+ G S
Sbjct: 247 ADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSC 306
Query: 110 ------------------------GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
PD Y I++ L K K AL LLN M E G
Sbjct: 307 LIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERG 366
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P + L+ G G LD K E++ C YT++I +G + AQ
Sbjct: 367 LVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQ 426
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV-------- 257
+F+ M G P+V T+N++I GFC AG ++A + +ME G NP+ +
Sbjct: 427 QIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEI-GRNPSLFLRLSQGANR 485
Query: 258 ------YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
T+V L ++G + +A+ ++ + + G
Sbjct: 486 VLDTASLQTMVEQLCDSGLILKAYNILMQLTDSG 519
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 15/192 (7%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP----------- 113
+ ++ +M G P ++T+N ++ + G +++ L +M G +P
Sbjct: 426 QQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM-EIGRNPSLFLRLSQGAN 484
Query: 114 ---DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACK 170
D + ++ L L A N+L + + GF P+++ + L+ G +AGN++
Sbjct: 485 RVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAF 544
Query: 171 YFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
F E+ KG PD V Y +I ++A E A + D ++ G P Y S +
Sbjct: 545 KLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWS 604
Query: 231 CMAGKFDEACTM 242
C K A ++
Sbjct: 605 CRRNKITLAFSL 616
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 3/220 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ Q++D G+AP+I+TYNI++ + G ++ +L E+ G SPD TY L++ L
Sbjct: 511 ILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLL 570
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD-ACKYFFDEMANKGCMPDV 185
++ A +L+ + + G P + + M R + A + + +
Sbjct: 571 SANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSE 630
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V +V GE+E+A M K + Y + G C AG+ +EA +
Sbjct: 631 VLKSV--EENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFT 688
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+E L+ L G L A E+ + ++KG
Sbjct: 689 LEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKG 728
>gi|449441228|ref|XP_004138384.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
gi|449499186|ref|XP_004160743.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01400,
mitochondrial-like [Cucumis sativus]
Length = 482
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 1/285 (0%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
+P T F+ +I GE L K ++ F F P N IL L+ R +
Sbjct: 137 YPVTPTAFSYIIKIYGEADLPDKALKVFYTMIDFGCTPSSKQLNRILEILVSHRNFIRPA 196
Query: 66 W-VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+ +++ G P+ +YNI++ A G + + L ++M PD TY L+
Sbjct: 197 FDLFKNARHHGVLPNTKSYNILIRAFCWNGNISIAYTLFNKMFERNVIPDVETYRTLMQG 256
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + ++ A++LL M G+ P L + TL++ L R L M KGC PD
Sbjct: 257 LCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLNSLCRKKKLREAYKLLCRMKVKGCNPD 316
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ Y +I + G A + + M + G LPN+ +Y S+ G C G F+ A ++
Sbjct: 317 IAHYNTVIMGFCREGRALDACKILEDMQSNGCLPNLVSYESLTNGLCDQGMFELAKGYVE 376
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
EM +G P+F V + LV + G++ E+ V+ M+++GK H
Sbjct: 377 EMTLKGFYPHFSVIHALVKGFHSIGRIHESCSVLEDMLKRGKAPH 421
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 3/286 (1%)
Query: 1 MIENGFPTTARTFN-ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
MI+ G +++ N IL R + F ++ P SYN ++ A
Sbjct: 167 MIDFGCTPSSKQLNRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNG 226
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ ++ +M + PD+ TY +M R +++ LL++M G+ PD +Y
Sbjct: 227 NISIAYTLFNKMFERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYA 286
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN-LDACKYFFDEMAN 178
LL+ L + K A LL MK G +P + H+ T++ G R G LDACK ++M +
Sbjct: 287 TLLNSLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACK-ILEDMQS 345
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC+P++V Y + G E A+ + M KG P+ +++++GF G+ E
Sbjct: 346 NGCLPNLVSYESLTNGLCDQGMFELAKGYVEEMTLKGFYPHFSVIHALVKGFHSIGRIHE 405
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+C+++++M RG P+ + ++S + A+ EV +++K
Sbjct: 406 SCSVLEDMLKRGKAPHSDTWEIIISGICEVEDTAKFCEVWEKILKK 451
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 1/184 (0%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPL-AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
G +P N +L +L + A +L + + G P+ + L+ GN+
Sbjct: 171 GCTPSSKQLNRILEILVSHRNFIRPAFDLFKNARHHGVLPNTKSYNILIRAFCWNGNISI 230
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
F++M + +PDV Y ++ ++ A DL + M+ KG +P+ +Y +++
Sbjct: 231 AYTLFNKMFERNVIPDVETYRTLMQGLCRKNQVNGAVDLLEDMLNKGYIPDTLSYATLLN 290
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYI 288
C K EA ++ M+ +GCNP+ YNT++ G+ +A +++ M G
Sbjct: 291 SLCRKKKLREAYKLLCRMKVKGCNPDIAHYNTVIMGFCREGRALDACKILEDMQSNGCLP 350
Query: 289 HLVS 292
+LVS
Sbjct: 351 NLVS 354
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H ++ + V+ ++ G P +++YN +M RLG LD+ RL M
Sbjct: 126 FNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAML 185
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L + M G P+ + FTTL+DG + G +D
Sbjct: 186 ASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVD 245
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A L D M K P+ TY ++I
Sbjct: 246 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLI 305
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G D A K M + + Y L+S L G+ +A +++R M+ G
Sbjct: 306 DGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVG 363
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C G++ +A+ V + K + RP SYN +++ +
Sbjct: 114 ILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITK---WGLRPSVVSYNTLMNGYIR 170
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY++++ + K+D + L DEM G P+ T
Sbjct: 171 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVT 230
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K + A+ + M P ++ + TL+ GL + G+L + DEM+
Sbjct: 231 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMS 290
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K PD + YT +I G+L+ A + MI + + Y ++I G C G+
Sbjct: 291 MKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSV 350
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM + G P+ Y +++ G + + ++++ M G +V+
Sbjct: 351 DAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVT 405
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y+QM + +PD++TYN ++ + G L Q H L+DEM PD TY L+
Sbjct: 250 IYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCC 309
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +A M + + +T L+ GL + G + EM N G PD
Sbjct: 310 KEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSR 369
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
YT++I + G++ K L M G +P+V TYN ++ G
Sbjct: 370 TYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 138/285 (48%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P T++ LI ++ V F++ N P ++N+++ L +
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E + + M ++G PD++TYN+++ G++D+ + D M PD +YNI
Sbjct: 299 VEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNI 358
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + K A+ + + + G PS++ L+ GL G + + FFDEM + G
Sbjct: 359 LINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD+ + ++ Y G +E+A F + + + N+ Y ++I G C GK D+A
Sbjct: 419 HIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAH 478
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ G +P+ + Y ++S G L EA +++R M + G
Sbjct: 479 ATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 128/284 (45%), Gaps = 1/284 (0%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNF-RPFKNSYNAILHALLGIRQY 61
+ G P TF LI + V F K N P + Y +++ L
Sbjct: 135 KKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHT 194
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ + + M P+ TY IV+ A + G LD LL+EM + PD TY+ L
Sbjct: 195 QKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTL 254
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K + L M + P+V F +++DGL + G ++ + M KG
Sbjct: 255 IDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV 314
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDV+ Y ++I Y G++++A+++FD MI K P++ +YN +I G+ K DEA
Sbjct: 315 DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQ 374
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +E+ +G P+ + N L+ L G+ A M+ G
Sbjct: 375 VCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAG 418
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 127/255 (49%), Gaps = 10/255 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MIE G T+N++I G+V AR++ + I + P SYN +++
Sbjct: 309 MIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSI---EPDIISYNILINGY-- 363
Query: 58 IRQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
RQ K+ E V +++S +G P I+T N+++ + LG+ DEM +G PD
Sbjct: 364 ARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDL 423
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+T+ LL K A++ + ++ D ++ +T ++DGL + G LD F++
Sbjct: 424 YTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEK 483
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ G PDV+ YT MI+ Y G L++A+D+ M G L + TYN ++RGF + K
Sbjct: 484 LPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNK 543
Query: 236 FDEACTMMKEMESRG 250
E ++E+ +
Sbjct: 544 VSEMKAFLEEIAGKS 558
Score = 104 bits (259), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 116/269 (43%), Gaps = 35/269 (13%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
+P +Y ++ A + +M + PDI TY+ ++ A +L + +
Sbjct: 210 KPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRT 269
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L EM P+ T+N ++ L K K A ++ +M E G DP V+ + ++DG
Sbjct: 270 LFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY-------------------------- 195
G +D + FD M NK PD++ Y ++I Y
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389
Query: 196 ---------IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
G + AQ+ FD M++ G +P+++T+ +++ G+ G +EA + ++
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
E R + N +Y ++ L GKL +AH
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAH 478
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 78/195 (40%), Gaps = 47/195 (24%)
Query: 138 LNHMKEVGFDPSVLHF-----------TTLMDGLSRAGNLDACKYFFDEMANKG-CMPDV 185
L H ++GF +HF TTL+ GL + + F ++ + C P+
Sbjct: 119 LMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNE 178
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y ++ G +KA DL M PN TY +I FC G D A +++ E
Sbjct: 179 VMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNE 238
Query: 246 MESRGCNPNFLVYNTLV---------SNLRN--------------------------AGK 270
M+ + P+ Y+TL+ N+R GK
Sbjct: 239 MKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGK 298
Query: 271 LAEAHEVIRHMVEKG 285
+ +A E++R+M+EKG
Sbjct: 299 VEDAEEIMRYMIEKG 313
>gi|384247929|gb|EIE21414.1| TPR-like protein [Coccomyxa subellipsoidea C-169]
Length = 448
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 131/274 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ +I CG RK +E + + ++Y+A+++ + + +L VY Q+
Sbjct: 75 TYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVYGQL 134
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
EG P+++TYNI++ ++G + ++LD + G P+ TYN +L + +P
Sbjct: 135 LREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRSGQP 194
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL + M G P+ +T L+ + G ++ F +M +GC +V+ Y+ +
Sbjct: 195 EHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSL 254
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I++ AG + A +L D M PN T+N+++ G++ A + ++M S GC
Sbjct: 255 ISACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGC 314
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ + Y L+S + A + + M +G
Sbjct: 315 KPDAVSYAILISAFDRGNQWCRALQALDEMQGQG 348
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 13/291 (4%)
Query: 4 NGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
+G T++ L+ C E+ LA V + ++ P +YN ++ H +G
Sbjct: 102 HGVVCNVHTYSALMNVCIKANELELALDVYGQLLRE---GCTPNLVTYNILIDIHGKMGN 158
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q + V + D+G P++ TYN ++ A R G+ + R+ + M G P TY
Sbjct: 159 WQEAV--QVLDALEDQGTKPEVRTYNTILSACNRSGQPEHALRVYERMLADGAQPTATTY 216
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ GK K AL + M G + +V+ +++L+ +AG DEM
Sbjct: 217 TALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGRWQLALELLDEMHR 276
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
C P+ V + ++++ G+ + AQD+F+ M + G P+ +Y +I F ++
Sbjct: 277 DNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAILISAFDRGNQWCR 336
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA---EAHEVIRHMVEKGK 286
A + EM+ +G P+ VYN ++ L +G L+ +A ++ + +G+
Sbjct: 337 ALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSAQLKAAQIFQAATRQGQ 387
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 35/232 (15%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
+ G RT+N ++ C G HAL
Sbjct: 171 DQGTKPEVRTYNTILSACNRSGQPE-------------------------HALR------ 199
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
VY++M +G P TY ++ A + GK+++ R+ +M R G + TY+ L+
Sbjct: 200 ----VYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLI 255
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K + AL LL+ M P+ + F L+ ++ G A + F++M + GC
Sbjct: 256 SACEKAGRWQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCK 315
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
PD V Y ++I+++ + +A D M +G P+V YN +I +G
Sbjct: 316 PDAVSYAILISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSG 367
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 6/192 (3%)
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D +TY ++ G + AL L+ M+ G +V ++ LM+ +A L+ +
Sbjct: 72 DVYTYTTIISQCGSHQQLRKALELVAEMRGHGVVCNVHTYSALMNVCIKANELELALDVY 131
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
++ +GC P++V Y ++I + G ++A + D + +G P V TYN+++ +
Sbjct: 132 GQLLREGCTPNLVTYNILIDIHGKMGNWQEAVQVLDALEDQGTKPEVRTYNTILSACNRS 191
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KY 287
G+ + A + + M + G P Y L+S GK+ EA + + MV +G Y
Sbjct: 192 GQPEHALRVYERMLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITY 251
Query: 288 IHLVSKFKRYKR 299
L+S ++ R
Sbjct: 252 SSLISACEKAGR 263
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G TA T+ LI G+ G + + F +Y++++ A +
Sbjct: 204 MLADGAQPTATTYTALISAYGKTGKIEEALRIFQDMVRRGCERNVITYSSLISACEKAGR 263
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++L + +M + P+ +T+N ++ A + G+ + ++M G PD +Y I
Sbjct: 264 WQLALELLDEMHRDNCKPNTVTFNALLSACAQGGQWKAAQDVFEQMPSCGCKPDAVSYAI 323
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
L+ +G++ AL L+ M+ G P V + +++ L+R+G L A
Sbjct: 324 LISAFDRGNQWCRALQALDEMQGQGHRPDVGVYNVVIEALTRSGVLSA 371
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 144/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ T TFN +I C G++ AR ++ F++ F P +YN+I+ +
Sbjct: 525 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE---GFIPSCMTYNSIVDGFIK 581
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
VY++M + G +P+++TY ++ + ++D + DEM G D
Sbjct: 582 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 641
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K +A +L + EVG P+ + + +++ G N++A ++ +M
Sbjct: 642 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 701
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N D+ YT +I + G L A DL+ M++KG +P++ T++ ++ G C G+ +
Sbjct: 702 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 761
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++EM+ + P+ L+YNTL++ G L EA + M+++G
Sbjct: 762 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 809
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 10/288 (3%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G + A + + + LF P K +Y+ ++ + +Y QM G
Sbjct: 336 CAQGNLDSALNLFNKITEDGLF---PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P + N ++ + ++ +L DE G + F TYNI++ L KG K A +L
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF-TYNIMMSWLCKGGKMDEACSL 451
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L++M G P+V+ + ++ G R GN+D F +M + P+VV Y+++I
Sbjct: 452 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 511
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G+ EKA DLFD M++ P FT+N++I G C G+ EA +K G P+ +
Sbjct: 512 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
YN++V G + A V R M E G Y L++ F + R
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 619
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 3/286 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+ E+G T+++LI C G K E + + KL P + N++L L
Sbjct: 351 ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPL 410
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN- 119
++ ++ + D G A +I TYNI+M + GK+D+ LLD M G P+ +YN
Sbjct: 411 WEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 469
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++L KG+ +A+ ++ + M P+V+ ++ L+DG + G+ + FD+M +
Sbjct: 470 MILGHCRKGNMDMAS-SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSL 528
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P + +I G++ +A+D + +G +P+ TYNS++ GF G D A
Sbjct: 529 NIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSA 588
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM G +PN + Y +L++ + ++ A + M EKG
Sbjct: 589 LAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 634
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 12/297 (4%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NI+ +C G++ A +++ + + P SYN ++ + V+
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMV---PNVVSYNDMILGHCRKGNMDMASSVF 487
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M P+++TY+I++ ++ G ++ L D+M +P T+N +++ L K
Sbjct: 488 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 547
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + L + E GF PS + + +++DG + GN+D+ + EM G P+VV Y
Sbjct: 548 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 607
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I + + ++ A D M KG +V Y+++I GFC + A + E+
Sbjct: 608 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 667
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK------GKYIHLVSKFKRYKR 299
G +PN +VYN+++S R+ + A + M+ G Y L+ + R
Sbjct: 668 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 724
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 36/322 (11%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
F R FN L+ ++ F + P+ N +L AL+ +
Sbjct: 146 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 205
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+Y +M G D T ++++ A + G++++ E G D Y+I++ +
Sbjct: 206 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 265
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHF-------------------------------- 153
K L LL MKE G+ PS F
Sbjct: 266 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNL 325
Query: 154 ---TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
T+LM G GNLD+ F+++ G P+ V Y+V+I +G +EKA +L+
Sbjct: 326 VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ 385
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G P+VF NS++RG+ A ++EA + E G N YN ++S L GK
Sbjct: 386 MKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGK 444
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
+ EA ++ +MV +G ++VS
Sbjct: 445 MDEACSLLDNMVNQGMVPNVVS 466
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 17/279 (6%)
Query: 24 GLARKVVERFIK-----------------SKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
G ARK++ R++ +K F+F +N +L+A + + +
Sbjct: 112 GHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAID 171
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ M + P + NI++ A R + + L ++M G D T ++++
Sbjct: 172 CFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACL 231
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A KE G ++ ++ + + N + +EM +G +P
Sbjct: 232 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 291
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+T +I + +A G + +A L + MI G+ N+ S+++G+C G D A + ++
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G PN + Y+ L+ N+G + +A E+ M G
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ LI C + LA K + + L +Y+A++
Sbjct: 595 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL---ELDVTAYSALIDGFCK 651
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + + ++ ++ + G +P+ + YN ++ L ++ +M D T
Sbjct: 652 RRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGT 711
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K + + A +L M G P ++ F L++GL G L+ + +EM
Sbjct: 712 YTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMD 771
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
K P V+ Y +I Y G L++A L D M+ +G +P+ TY+ +I G
Sbjct: 772 RKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 17/219 (7%)
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D +P + +++ CAK R F D +N LL+ + ++
Sbjct: 125 DSDPSPVVFVDHLINCAK-----------------RFDFELDHRVFNYLLNAYIRANRIE 167
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A++ N M P V + L+ L R + + +++M +G D VM+
Sbjct: 168 NAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMV 227
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + G +E+A++ F +G + Y+ +I+ C + +++EM+ RG
Sbjct: 228 RACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWV 287
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
P+ + +++ G + EA + M+ GK ++LV
Sbjct: 288 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 326
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+++ +++ L Q + + ++M + P +L YN ++ +R G L + L DEM
Sbjct: 746 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 805
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLA 133
G PD TY+IL++ KGD+ L+
Sbjct: 806 LDRGLVPDDVTYDILINGKFKGDRSLS 832
>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 867
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 135/288 (46%), Gaps = 5/288 (1%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI + F +N +I C G+ A+++++ IK K ++ SYN+I+
Sbjct: 545 MIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGC--TSYNSIIDGFFK 602
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Y++MS+ G +P+++T+ ++ + ++D ++ EM D
Sbjct: 603 EGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPA 662
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K + A L + + E+G P+V + L+ G G +DA + +M
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMV 722
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G D+ YT MI + G L A DL+ ++ G +P+ Y ++ G G+F
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFV 782
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M++EM+ + PN L+Y+T+++ G L EA V M+EKG
Sbjct: 783 RASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKG 830
Score = 90.5 bits (223), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 139/293 (47%), Gaps = 21/293 (7%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI----RQ 60
G P + T+ +I C + G + V+ +K ++ F S A + G
Sbjct: 305 GVPASQETYTSVIVACVKEGNMEEAVK--VKDEMVGFG-IPMSVIAATSLITGFCNGNEL 361
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVM---CAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K +++ + +M +EG APD + +++++ C + K + ++ M G +P
Sbjct: 362 GKALDF-FNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYK---RMKSVGIAPSSVL 417
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH---FTTLMDGLSRAGNLDACKYFFD 174
+ ++ K + P AAL + N F+ + H + L + G +DA F
Sbjct: 418 VHKMIQGCLKAESPEAALEIFND----SFETWIAHGFMCNKIFLLLCKQGKVDAATSFLR 473
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
M NKG P+VV Y M+ ++ ++ A+ +F M+ KG PN FTY+ +I GF
Sbjct: 474 MMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQ 533
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
A ++ +M + N ++YNT+++ L G+ ++A E++++++++ +Y
Sbjct: 534 DEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 1/245 (0%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
N PF N +L +L+ + +Y +M G A D +T ++M A R K ++
Sbjct: 199 NVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEA 258
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH-FTTLMD 158
++ + G PD +++ + K + AL+LL M+E G P+ +T+++
Sbjct: 259 MKIFRRVMSRGAEPDGLLFSLAVQAACKMKDLVMALDLLREMREKGGVPASQETYTSVIV 318
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+ GN++ DEM G V+ T +IT + EL KA D F+ M +G P
Sbjct: 319 ACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEEEGLAP 378
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ ++ MI FC + ++A + K M+S G P+ ++ + ++ A A E+
Sbjct: 379 DKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEAALEIF 438
Query: 279 RHMVE 283
E
Sbjct: 439 NDSFE 443
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 106/232 (45%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ENG TF LI C + LA +++ +KSK + + +Y A++
Sbjct: 616 MSENGISPNVVTFTSLINGFCKSNRMDLALEMIHE-MKSK--DLKLDVPAYGALIDGFCK 672
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
K ++ ++ + G P++ YN ++ LGK+D L +M G S D T
Sbjct: 673 KNDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFT 732
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K + A +L + + +G P + + L++GLS+ G +EM
Sbjct: 733 YTTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMK 792
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
K P+V+ Y+ +I + G L +A + D M+ KG + + +N ++ G
Sbjct: 793 KKDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSG 844
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 75/154 (48%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + YN ++ + + +Y++M ++G + D+ TY ++ + G L L
Sbjct: 693 PNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDL 752
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
E+ G PD Y +L++ L K + + A +L MK+ P+VL ++T++ G R
Sbjct: 753 YSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHR 812
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
GNL+ DEM KG + D + ++++ +
Sbjct: 813 EGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRV 846
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 73/150 (48%)
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
NL++ K F+ S F L++ R +D F+ M ++ +P V +++S
Sbjct: 155 NLVDSSKRFDFELSSRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSL 214
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
+ + +++A+++++ M+ G + T ++R K +EA + + + SRG P+
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDG 274
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
L+++ V L A +++R M EKG
Sbjct: 275 LLFSLAVQAACKMKDLVMALDLLREMREKG 304
>gi|326504498|dbj|BAJ91081.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 793
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPF-KNSYNAILHALLGIR 59
M+ NG T+N+++ ++ + K V + S + P + +YN ++
Sbjct: 204 MVANGIQPAIVTYNVVLHVYSKIAVPWKDVVALVDSMKNDGIPLDRYTYNTLISCCRRGA 263
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YK V+ +M G+ PD +T+N ++ + D+ +L EM G P TYN
Sbjct: 264 LYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYN 323
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K A L M+ G P V+ +TTL+ GL RAG +DA +DEM
Sbjct: 324 SLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRN 383
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ Y +I + G+ + +FD + + G +P+V T+N+++ F G E
Sbjct: 384 GCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEV 443
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKY 287
+ KEM+ G P Y +L+S+ G ++ E+ + M+E G Y
Sbjct: 444 SGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIY 491
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 115/244 (47%), Gaps = 1/244 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHR 101
P ++Y A++ A +++ V+++M G P I+TYN+V+ ++
Sbjct: 176 PDASAYTALVSAFSRASRFRDAVAVFRRMVANGIQPAIVTYNVVLHVYSKIAVPWKDVVA 235
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+D M G D +TYN L+ +G A + + M+ GF+P + F +L+D
Sbjct: 236 LVDSMKNDGIPLDRYTYNTLISCCRRGALYKEAAKVFDEMRAAGFEPDKVTFNSLLDVYG 295
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A D EM GC P VV Y +I+SY+ G L++A +L + M KG P+V
Sbjct: 296 KARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVI 355
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
TY ++I G AGK D A EM GC PN YN L+ GK E V +
Sbjct: 356 TYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDL 415
Query: 282 VEKG 285
G
Sbjct: 416 RSAG 419
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 133/271 (49%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M GF TFN L+ G+ + + + + +L P +YN+++ + +
Sbjct: 275 MRAAGFEPDKVTFNSLLDVYGKARMHDEAIGVLKEMELGGCPPSVVTYNSLISSYVKDGL 334
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + ++M +G PD++TY ++ R GK+D DEM R+G P+ TYN
Sbjct: 335 LKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAAIGTYDEMLRNGCKPNLCTYNA 394
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + G K + + + ++ GF P V+ + TL+ + G F EM G
Sbjct: 395 LIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSG 454
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P+ Y +I+SY G +++ +++ MI G P++ TYN+++ G++++A
Sbjct: 455 YVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAE 514
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ EME+ C P+ L Y++L+ NA KL
Sbjct: 515 KLFAEMENLDCRPDELSYSSLLHAYANAKKL 545
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 140/287 (48%), Gaps = 8/287 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T+N ++ G + + F + + + RP + SY+++LHA ++
Sbjct: 485 MIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKK 544
Query: 61 YKLIEWVYQQMSDEGYAPDILTYN----IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +S++ YA I +++ ++ ++ L + + E+GR S D +
Sbjct: 545 LDKM----KALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRRCSLDIN 600
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
N ++ V GK +L+ MK + S + +LM SR G+ + C+ E+
Sbjct: 601 VLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCENILTEI 660
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ G PD Y MI +Y G++++A LF M + G +P++ TYN ++ + F
Sbjct: 661 KSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSYVANSMF 720
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+EA +++ M +RGC PN YN+++ GK+A+A + ++ +
Sbjct: 721 EEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKIADAKSFLSNLPQ 767
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 135/320 (42%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ GL +V F + K + P +++Y +++ + +
Sbjct: 419 GFVPDVVTWNTLLAVFGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQS 478
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y++M + G PDI TYN V+ A R G+ +Q +L EM PD +Y+ LLH
Sbjct: 479 MEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHA 538
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL----SRAGNLDACKYFFDEMANKG 180
K L+ + + E + + L+ L S+ NL + F E+ +
Sbjct: 539 YANAKK----LDKMKALSEDIYAEKIESHHGLVKTLVLVNSKVNNLSETEKAFLELGRRR 594
Query: 181 CMPDVVCYTVMITSY-----------------------------------IAAGELEKAQ 205
C D+ M++ Y G+ EK +
Sbjct: 595 CSLDINVLNAMVSVYGKNRMVKKVEEILSLMKGSSINLSTATYNSLMHMYSRLGDCEKCE 654
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ + + G P+ ++YN+MI + G+ EA + EM+S G P+ + YN V +
Sbjct: 655 NILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKSSGLIPDIVTYNIFVKSY 714
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
EA +++R+MV +G
Sbjct: 715 VANSMFEEAIDLVRYMVTRG 734
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 6/272 (2%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G P + T+N LI + + GL ++ E + ++ +P +Y ++ L +
Sbjct: 314 GCPPSVVTYNSLISSYVKDGLLKEAAELKEEMEVKGIQPDVITYTTLISGLDRAGKIDAA 373
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
Y +M G P++ TYN ++ GK + + D++ +GF PD T+N LL V
Sbjct: 374 IGTYDEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMAVFDDLRSAGFVPDVVTWNTLLAV 433
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
G+ + MK+ G+ P + +L+ SR G D + M G PD
Sbjct: 434 FGQNGLDSEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQSMEIYKRMIEAGIYPD 493
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+ Y ++++ G E+A+ LF M P+ +Y+S++ + A K D+ + +
Sbjct: 494 ISTYNAVLSALARGGRWEQAEKLFAEMENLDCRPDELSYSSLLHAYANAKKLDKMKALSE 553
Query: 245 EMESR------GCNPNFLVYNTLVSNLRNAGK 270
++ + G ++ N+ V+NL K
Sbjct: 554 DIYAEKIESHHGLVKTLVLVNSKVNNLSETEK 585
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N L+ +G K + K RP + SYN +++A Q K ++ +M
Sbjct: 636 TYNSLMHMYSRLGDCEKCENILTEIKSSGARPDRYSYNTMIYAYGRKGQMKEASRLFSEM 695
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G PDI+TYNI + + ++ L+ M G P+ TYN +L + K
Sbjct: 696 KSSGLIPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTRGCKPNERTYNSILQEYCRHGKI 755
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
A + L+++ ++ S L++ L+R + D
Sbjct: 756 ADAKSFLSNLPQLHPGISKQEQQRLLELLARHTSRD 791
>gi|297827821|ref|XP_002881793.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
gi|297327632|gb|EFH58052.1| EMB2654 [Arabidopsis lyrata subsp. lyrata]
Length = 822
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 149/291 (51%), Gaps = 14/291 (4%)
Query: 10 ARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQ 69
A T++ LI G G R + P +++YN +++A ++ V +
Sbjct: 178 AETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCK 237
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL---DEMGRSGFSPDFHTYNILLHVLG 126
+M+D G PD++T+NIV+ A Y+ G+ Q+ + L + M + PD T+NI+++ L
Sbjct: 238 KMTDNGVGPDLVTHNIVLSA-YKSGR--QYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 294
Query: 127 KGDKPLAALNLLNHMKEVGFD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K + AL++ N M++ + P V+ FT++M S G ++ C+ F+ M +G P+
Sbjct: 295 KLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPN 354
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA---GKFDEACT 241
+V Y ++ +Y G E A +F + G +P+V +Y S++ + + GK E
Sbjct: 355 IVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQPGKAKEVFL 414
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
MM++ + PN + YN L+ + G LAEA E+ R M + G ++VS
Sbjct: 415 MMRKERRK---PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVS 462
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 136/317 (42%), Gaps = 40/317 (12%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIR-QYKL 63
P T TFNI+I ++G + + ++ F ++ K RP ++ +I+H L +R + +
Sbjct: 281 PDTT-TFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMH-LYSVRGEIEN 338
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
V++ M EG P+I++YN +M A G + + ++ R+G PD +Y LL+
Sbjct: 339 CRAVFEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLN 398
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
G+ +P A + M++ P+V+ + L+D G L F +M G P
Sbjct: 399 SYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKP 458
Query: 184 DVV-----------------------------------CYTVMITSYIAAGELEKAQDLF 208
+VV Y I SYI A ELEKA L+
Sbjct: 459 NVVSVCTLLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALY 518
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M K + T+ +I G C K+ EA + +KEME VY++++
Sbjct: 519 QTMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQ 578
Query: 269 GKLAEAHEVIRHMVEKG 285
G++ EA + M G
Sbjct: 579 GQVTEAESIFNQMKMAG 595
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 129/265 (48%), Gaps = 8/265 (3%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSD---EGYAPDILTYNIVMCA 89
F + + ++ +P +Y+A+++A Q++ W M D AP TYN ++ A
Sbjct: 166 FFEMQKWSCKPDAETYDALINAHGRAGQWR---WAMNLMDDMLRAAIAPSRSTYNNLINA 222
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
G Q + +M +G PD T+NI+L G + AL+ MK P
Sbjct: 223 CGSSGNWRQALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPD 282
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANK--GCMPDVVCYTVMITSYIAAGELEKAQDL 207
F ++ LS+ G F+ M +K C PDVV +T ++ Y GE+E + +
Sbjct: 283 TTTFNIIIYCLSKLGQSSQALDVFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAV 342
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
F+ M+ +G PN+ +YN+++ + + G + A ++ +++ G P+ + Y +L+++
Sbjct: 343 FEAMLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGR 402
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + +A EV M ++ + ++V+
Sbjct: 403 SRQPGKAKEVFLMMRKERRKPNVVT 427
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 67 VYQQM-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V++ M S + Y YN+++ R +DQ L EM + PD TY+ L++
Sbjct: 129 VFKWMKSQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAH 188
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN----LDACKYFFDEMANKGC 181
G+ + A+NL++ M PS + L++ +GN L+ CK +M + G
Sbjct: 189 GRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRQALEVCK----KMTDNGV 244
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD+V + +++++Y + + KA F+ M P+ T+N +I G+ +A
Sbjct: 245 GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALD 304
Query: 242 MMKEMESR--GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ M + C P+ + + +++ G++ V M+ +G ++VS
Sbjct: 305 VFNSMRDKRAECRPDVVTFTSIMHLYSVRGEIENCRAVFEAMLAEGLKPNIVS 357
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 126/319 (39%), Gaps = 35/319 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G ++N L+ G++ + F K P SY ++L++ RQ
Sbjct: 346 MLAEGLKPNIVSYNALMGAYAVHGMSENALSVFGDIKRNGIVPDVVSYTSLLNSYGRSRQ 405
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V+ M E P+++TYN ++ A G L + + +M + G P+ +
Sbjct: 406 PGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGTKPNVVSVCT 465
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL + K + +L+ + G + + + + + A L+ + M K
Sbjct: 466 LLAACSRSKKKVNVETVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQTMRKKK 525
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
D V +T++I+ +Y G++ +A+
Sbjct: 526 VKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+F+ M G P+V Y SM+ + + K+ +AC + EME+ G P+ + + L+
Sbjct: 586 SIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF 645
Query: 266 RNAGKLAEAHEVIRHMVEK 284
G+ + ++ M EK
Sbjct: 646 NKGGQPSNVFVLMDLMREK 664
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%)
Query: 82 TYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM 141
Y+ V+CA + G++ + + ++M +G PD Y +LH +K A L M
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCKPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
+ G +P + + LM ++ G D M K + + ++ E
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEVPFTGAVFFEIFSACNTLQEW 686
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
++A DL M ++ N M+ F +GK + + ++ + G NF Y L
Sbjct: 687 KRAIDLIQMMDPYLPSLSIGLTNQMLYLFGKSGKVEAMMKLFYKIIASGVEINFKTYAIL 746
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
+ +L G + EV+ M + G
Sbjct: 747 LEHLLAVGNWRKYIEVLEWMSDAG 770
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 127/245 (51%), Gaps = 3/245 (1%)
Query: 44 FKNSYNAILHALLGIRQYKLIEW---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F S A+ + G+R+ IE + +++ D G +P++ YN ++ + + K +
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L D MG+ G P+ TY+IL+ + + K AL+ L M + G SV + +L++G
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGH 447
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G++ A + F EM NK P VV YT ++ Y + G++ KA L+ M KG P++
Sbjct: 448 CKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSI 507
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+T+ +++ G AG +A + EM PN + YN ++ G +++A E ++
Sbjct: 508 YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKE 567
Query: 281 MVEKG 285
M EKG
Sbjct: 568 MTEKG 572
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 137/306 (44%), Gaps = 38/306 (12%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G++ A +V+R + F P YNA++ +L R++ E ++ +M G P+
Sbjct: 346 GKIEEALNLVKRVVD---FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH----------------- 123
+TY+I++ R GKLD L EM +G + YN L++
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 124 VLGKGDKPLA------------------ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
++ K +P AL L + M G PS+ FTTL+ GL RAG
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
+ F+EMA P+ V Y VMI Y G++ KA + M KG +P+ ++Y
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+I G C+ G+ EA + + C N + Y L+ GKL EA V + MV++G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 286 KYIHLV 291
+ LV
Sbjct: 643 VDLDLV 648
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 119/244 (48%)
Query: 40 NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
+ +P +Y +++ L ++++++ + +M ++P + ++ + GK+++
Sbjct: 292 DLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEA 351
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L+ + G SP+ YN L+ L KG K A L + M ++G P+ + ++ L+D
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
R G LD F EM + G V Y +I + G++ A+ MI K P
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
V TY S++ G+C GK ++A + EM +G P+ + TL+S L AG + +A ++
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 280 HMVE 283
M E
Sbjct: 532 EMAE 535
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 115/255 (45%), Gaps = 8/255 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGIRQYKLIEWV 67
T++ILI C G++ A + + + L + P YN++++ E
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP----YNSLINGHCKFGDISAAEGF 459
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M ++ P ++TY +M GK+++ RL EM G +P +T+ LL L +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFR 519
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A+ L N M E P+ + + +++G G++ F EM KG +PD
Sbjct: 520 AGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I G+ +A+ DG+ N Y ++ GFC GK +EA ++ +EM
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 248 SRGCNPNFLVYNTLV 262
RG + + + Y L+
Sbjct: 640 QRGVDLDLVCYGVLI 654
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 14/292 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G ++ LI C G+ A+ V+ K N + Y +LH
Sbjct: 568 MTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG---NCELNEICYTGLLHGF-- 622
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
R+ KL E V Q+M G D++ Y +++ + F LL EM G PD
Sbjct: 623 CREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDD 682
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
Y ++ K A + + M G P+ + +T +++GL +AG ++ + +
Sbjct: 683 VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Query: 176 MANKGCMPDVVCYTVMITSYIAAGE--LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
M +P+ V Y + + GE ++KA +L + I KG L N TYN +IRGFC
Sbjct: 743 MQPVSSVPNQVTYGCFL-DILTKGEVDMQKAVELHNA-ILKGLLANTATYNMLIRGFCRQ 800
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G+ +EA ++ M G +P+ + Y T+++ L + +A E+ M EKG
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH---RLLD 104
YN ++ L ++ + + ++ + PD++TY ++ Y L K+ +F ++D
Sbjct: 265 YNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLV---YGLCKVQEFEIGLEMMD 321
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM FSP + L+ L K K ALNL+ + + G P++ + L+D L +
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGR 381
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+ FD M G P+ V Y+++I + G+L+ A M+ G +V+ YN
Sbjct: 382 KFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
S+I G C G A M EM ++ P + Y +L+ + GK+ +A + M K
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 285 G 285
G
Sbjct: 502 G 502
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 106/243 (43%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + +A+LH L+ R + L ++ M G PD+ Y V+ + L L + +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ M +G + YN+L+ L K K A+ + + P V+ + TL+ GL +
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ DEM P + ++ G++E+A +L ++ G PN+F
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
YN++I C KF EA + M G PN + Y+ L+ GKL A + MV
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 283 EKG 285
+ G
Sbjct: 430 DTG 432
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 112/241 (46%), Gaps = 6/241 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++ L + KL + ++M D G PD + Y ++ AK + G + + D M
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
G P+ TY +++ L K A L + M+ V P+ + + +D L++ G +D
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVD 768
Query: 168 ACKYFFDEMAN---KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
K E+ N KG + + Y ++I + G +E+A +L MI G P+ TY
Sbjct: 769 MQKAV--ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYT 826
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+MI C +A + M +G P+ + YNTL+ AG++ +A E+ M+ +
Sbjct: 827 TMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ 886
Query: 285 G 285
G
Sbjct: 887 G 887
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+P Y +++ A +K ++ M +EG P+ +TY V+ + G +++
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L +M P+ TY L +L KG+ + L++ G + + L+ G
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
R G ++ M G PD + YT MI +++KA +L++ M KG P+
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
YN++I G C+AG+ +A + EM +G PN T SN
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 121/319 (37%), Gaps = 41/319 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G + +N LI C G++ A + I KL P +Y +++
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL---EPTVVTYTSLMGGYCS 484
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y +M+ +G AP I T+ ++ +R G + +L +EM P+ T
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD--- 174
YN+++ + A L M E G P + L+ GL G K F D
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 175 --------------------------------EMANKGCMPDVVCYTVMITSYIAAGELE 202
EM +G D+VCY V+I + + +
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRK 664
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
L M +G P+ Y SMI G F EA + M + GC PN + Y ++
Sbjct: 665 LFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 263 SNLRNAGKLAEAHEVIRHM 281
+ L AG + EA + M
Sbjct: 725 NGLCKAGFVNEAEVLCSKM 743
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 110/244 (45%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
RP Y ++ +L ++ + + M G +I+ YN+++ + K+ +
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
+ ++ PD TY L++ L K + L +++ M + F PS ++L++GL
Sbjct: 283 GIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGL 342
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G ++ + + G P++ Y +I S + +A+ LFD M G PN
Sbjct: 343 RKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPND 402
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY+ +I FC GK D A + + EM G + YN+L++ G ++ A +
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 281 MVEK 284
M+ K
Sbjct: 463 MINK 466
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 144/288 (50%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ T TFN +I C G++ AR ++ F++ F P +YN+I+ +
Sbjct: 565 MLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEE---GFIPSCMTYNSIVDGFIK 621
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
VY++M + G +P+++TY ++ + ++D + DEM G D
Sbjct: 622 EGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTA 681
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ L+ K +A +L + EVG P+ + + +++ G N++A ++ +M
Sbjct: 682 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 741
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N D+ YT +I + G L A DL+ M++KG +P++ T++ ++ G C G+ +
Sbjct: 742 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 801
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A +++EM+ + P+ L+YNTL++ G L EA + M+++G
Sbjct: 802 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRG 849
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 10/288 (3%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G + A + + + LF P K +Y+ ++ + +Y QM G
Sbjct: 376 CAQGNLDSALNLFNKITEDGLF---PNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P + N ++ + ++ +L DE G + F TYNI++ L KG K A +L
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIF-TYNIMMSWLCKGGKMDEACSL 491
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L++M G P+V+ + ++ G R GN+D F +M + P+VV Y+++I
Sbjct: 492 LDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFK 551
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G+ EKA DLFD M++ P FT+N++I G C G+ EA +K G P+ +
Sbjct: 552 KGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
YN++V G + A V R M E G Y L++ F + R
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 659
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 140/286 (48%), Gaps = 3/286 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+ E+G T+++LI C G K E + + KL P + N++L L
Sbjct: 391 ITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPL 450
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN- 119
++ ++ + D G A +I TYNI+M + GK+D+ LLD M G P+ +YN
Sbjct: 451 WEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYND 509
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++L KG+ +A+ ++ + M P+V+ ++ L+DG + G+ + FD+M +
Sbjct: 510 MILGHCRKGNMDMAS-SVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSL 568
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P + +I G++ +A+D + +G +P+ TYNS++ GF G D A
Sbjct: 569 NIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSA 628
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM G +PN + Y +L++ + ++ A + M EKG
Sbjct: 629 LAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKG 674
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 12/297 (4%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NI+ +C G++ A +++ + + P SYN ++ + V+
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMV---PNVVSYNDMILGHCRKGNMDMASSVF 527
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
M P+++TY+I++ ++ G ++ L D+M +P T+N +++ L K
Sbjct: 528 SDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKV 587
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A + L + E GF PS + + +++DG + GN+D+ + EM G P+VV Y
Sbjct: 588 GQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTY 647
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
T +I + + ++ A D M KG +V Y+++I GFC + A + E+
Sbjct: 648 TSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLE 707
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK------GKYIHLVSKFKRYKR 299
G +PN +VYN+++S R+ + A + M+ G Y L+ + R
Sbjct: 708 VGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGR 764
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 134/322 (41%), Gaps = 36/322 (11%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
F R FN L+ ++ F + P+ N +L AL+ +
Sbjct: 186 FELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELR 245
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+Y +M G D T ++++ A + G++++ E G D Y+I++ +
Sbjct: 246 DLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAV 305
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHF-------------------------------- 153
K L LL MKE G+ PS F
Sbjct: 306 CKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNL 365
Query: 154 ---TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
T+LM G GNLD+ F+++ G P+ V Y+V+I +G +EKA +L+
Sbjct: 366 VVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQ 425
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M G P+VF NS++RG+ A ++EA + E G N YN ++S L GK
Sbjct: 426 MKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGK 484
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
+ EA ++ +MV +G ++VS
Sbjct: 485 MDEACSLLDNMVNQGMVPNVVS 506
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 118/279 (42%), Gaps = 17/279 (6%)
Query: 24 GLARKVVERFIK-----------------SKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
G ARK++ R++ +K F+F +N +L+A + + +
Sbjct: 152 GHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAID 211
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+ M + P + NI++ A R + + L ++M G D T ++++
Sbjct: 212 CFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACL 271
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A KE G ++ ++ + + N + +EM +G +P
Sbjct: 272 KEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEA 331
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+T +I + +A G + +A L + MI G+ N+ S+++G+C G D A + ++
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G PN + Y+ L+ N+G + +A E+ M G
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T+ LI C + LA K + + L +Y+A++
Sbjct: 635 MCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGL---ELDVTAYSALIDGFCK 691
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + + ++ ++ + G +P+ + YN ++ L ++ +M D T
Sbjct: 692 RRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGT 751
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ L K + + A +L M G P ++ F L++GL G L+ + +EM
Sbjct: 752 YTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMD 811
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
K P V+ Y +I Y G L++A L D M+ +G +P+ TY+ +I G
Sbjct: 812 RKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 863
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/219 (20%), Positives = 92/219 (42%), Gaps = 17/219 (7%)
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
D +P + +++ CAK R F D +N LL+ + ++
Sbjct: 165 DSDPSPVVFVDHLINCAK-----------------RFDFELDHRVFNYLLNAYIRANRIE 207
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A++ N M P V + L+ L R + + +++M +G D VM+
Sbjct: 208 NAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMV 267
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+ + G +E+A++ F +G + Y+ +I+ C + +++EM+ RG
Sbjct: 268 RACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWV 327
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
P+ + +++ G + EA + M+ GK ++LV
Sbjct: 328 PSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+++ +++ L Q + + ++M + P +L YN ++ +R G L + L DEM
Sbjct: 786 TFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM 845
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLA 133
G PD TY+IL++ KGD+ L+
Sbjct: 846 LDRGLVPDDVTYDILINGKFKGDRSLS 872
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 144/312 (46%), Gaps = 41/312 (13%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNI+I C GE+ AR + F++ K P +YN+++ + +E +
Sbjct: 202 TFNIVIDFLCKEGELVEARAL---FVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLV 258
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M G A D++TYN ++ + G++++ + EM R G + T++ + K
Sbjct: 259 SEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE 318
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A+ L M+ G P+ +T+L+DG +AG LD DEM ++G +P+VV Y
Sbjct: 319 GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTY 378
Query: 189 TVMITSYIAAGEL-----------------------------------EKAQDLFDGMIT 213
TVM+ G++ E+A DL + M
Sbjct: 379 TVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG +V Y ++I G C K DEA +++ +M G PN ++Y T++ L AGK +E
Sbjct: 439 KGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESE 498
Query: 274 AHEVIRHMVEKG 285
A ++ +++ G
Sbjct: 499 AVALLHKILDSG 510
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 140/283 (49%), Gaps = 12/283 (4%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKN--SYNAILHALLGIRQYKLI 64
P RT N ++ + LAR ++ +LF+ P N ++N ++ L ++ +L+
Sbjct: 166 PPNTRTCNHIL-----LRLARNRQGGLVR-RLFDLLPVPNVFTFNIVIDFL--CKEGELV 217
Query: 65 EW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E ++ +M G +PD++TYN ++ + G L++ +L+ EM +SG + D TYN L+
Sbjct: 218 EARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALI 277
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ K + A + MK G +V+ F+T +D + G + F +M +G M
Sbjct: 278 NCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMM 337
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ YT ++ AG L+ A L D M+ +G +PNV TY M+ G C GK EA +
Sbjct: 338 PNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNV 397
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ME G N L+Y TL+ A +++ M KG
Sbjct: 398 LSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKG 440
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 132/285 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G TF+ + + GL ++ ++ F + ++ P + +Y +++ +
Sbjct: 296 MKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGR 355
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +M +G P+++TY +++ + GK+ + +L M R G + Y
Sbjct: 356 LDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTT 415
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H + AL+LLN MK G + V + TL+ GL + +D K +MA G
Sbjct: 416 LIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCG 475
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ V YT ++ + AG+ +A L ++ G PNV TY ++I G C AG EA
Sbjct: 476 LRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAI 535
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M G +PN Y L+ G L +A ++ M++KG
Sbjct: 536 SHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKG 580
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 114/234 (48%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y ++ L ++ + + +M+ G P+ + Y +M A ++ GK + LL ++
Sbjct: 448 YGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKIL 507
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SGF P+ TY L+ L K A++ N M+E+G DP+V +T L+DG + G+L+
Sbjct: 508 DSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLN 567
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +EM +KG D V YT +I Y+ L+ A L MI G +++ Y I
Sbjct: 568 KAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFI 627
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
GFC EA ++ EM G P+ VYN L+ + G + EA + M
Sbjct: 628 SGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEM 681
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 8/217 (3%)
Query: 78 PDILTYNIVMC--AKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
P+ T N ++ A+ R G L RL D + P+ T+NI++ L K + + A
Sbjct: 167 PNTRTCNHILLRLARNRQGGL--VRRLFDLLP----VPNVFTFNIVIDFLCKEGELVEAR 220
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
L MK +G P V+ + +L+DG + G+L+ + EM GC DVV Y +I +
Sbjct: 221 ALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCF 280
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
G +EKA F M +G + NV T+++ + FC G EA + +M RG PN
Sbjct: 281 SKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNE 340
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y +LV AG+L +A ++ MV +G ++V+
Sbjct: 341 FTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVT 377
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G T+ +++ C G+V A V+ + + + Y ++H
Sbjct: 366 MVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERG---GVKANELLYTTLIHGHFM 422
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + QM ++G D+ Y ++ + K+D+ LL +M G P+
Sbjct: 423 NNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVI 482
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ L K K A+ LL+ + + GF P+V+ + L+DGL +AG++ F++M
Sbjct: 483 YTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR 542
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G P+V YT +I + G L KA L + MI KG + Y S+I G+
Sbjct: 543 ELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQ 602
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + +M G + Y +S N + EA V+ M+ G
Sbjct: 603 DAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTG 650
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 138/292 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G A TF+ LI + G ++ ++ + P +SY +++H +
Sbjct: 390 MFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGE 449
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + +M + G+ PD++T+ ++ G++ + + ++M PD + YN+
Sbjct: 450 VIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNV 509
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K AA NL+ M E P +TTL+DG R +LD + F+ M KG
Sbjct: 510 LISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKG 569
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDVV Y MI Y G + +A + M G++P+ FTY ++I G+ G A
Sbjct: 570 IHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGAL 629
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++ +M R C PN + Y++L++ G A + M +G + ++++
Sbjct: 630 SLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVIT 681
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 131/286 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M G T T+ L+ G G K+ + + P YN+++ AL R
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRS 379
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V +QM G PD +T++ ++ + G++ + RLL E R +P+ +Y
Sbjct: 380 ASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H + + A NLL M E G P V+ F L+ GL AG + ++MA +
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PD Y V+I+ L A++L + M+ + P+ + Y ++I GF DEA
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ + ME +G +P+ + YN ++ G + EA E + M + G+
Sbjct: 560 KIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGR 605
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 113/233 (48%), Gaps = 6/233 (2%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M +G P ++TY +M R G L++ LL EM P+ YN ++ L K
Sbjct: 319 EMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCR 378
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
AL +L M G DP + F+TL+ GL + G + + E P++ YT
Sbjct: 379 SASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYT 438
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + GE+ A +L M+ +G P+V T+ ++I G +AG+ EA + ++M +R
Sbjct: 439 SLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAAR 498
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG----KYIH--LVSKFKR 296
P+ +YN L+S L L A +I M+E+ KY++ L+ F R
Sbjct: 499 QLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIR 551
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 133/294 (45%), Gaps = 21/294 (7%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
A +N+LI C + AR ++E ++ N P K Y ++ +
Sbjct: 504 ANIYNVLISGLCKKKMLPAARNLIEEMLEQ---NVHPDKYVYTTLIDGFIRNESLDEARK 560
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M +G PD++ YN ++ + G +++ + M + G PD TY L+
Sbjct: 561 IFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYA 620
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AL+LL M + P+V+ +++L++G + G+ DA + F M ++G P+V+
Sbjct: 621 KQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVI 680
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC--MAGKFDEACTMMK 244
YT++I S ++ +A F+ M+ PN +T +S++ G C MA C+
Sbjct: 681 TYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTV 740
Query: 245 EMESRG-------------CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +G C+P YN ++ +L L EA ++ M KG
Sbjct: 741 NLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKG 794
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 87/184 (47%)
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D +L DEM D ++ +++ L L L+ G P+ + + L
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+DG R G++ EM KG +P VV Y +++ G+LEK L M +
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
PNV YNS+I C +A ++K+M + GC+P+ + ++TL+S L G++ EA
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420
Query: 277 VIRH 280
++R
Sbjct: 421 LLRE 424
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKL 63
PT A L+ T + G+ K E +++ + P N +L L+ R++
Sbjct: 184 AVPTRA-CLGALVATYADAGMEAKAAEMCQRAREHHGTLPGATHTNRLLRLLVERRRWDD 242
Query: 64 IEWVYQQM-SDEGYAPDILTYNIV--MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y +M ++E A D T +V +C + G +++ +L++ +G P+ YN+
Sbjct: 243 ARKLYDEMLAEESGADDYSTCVMVRGLCLE---GLVEKGLKLIEARWGAGCVPNAVFYNV 299
Query: 121 LLH-VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ +GD L LL M+ G P+V+ + TLM L R G+L+ EM +
Sbjct: 300 LIDGYCRRGDVGRGIL-LLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRER 358
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P+V Y +I + +A + M G P+ T++++I G C G+ EA
Sbjct: 359 RLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEA 418
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++E NPN Y +L+ G++ A ++ M+E+G +V+
Sbjct: 419 ERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVT 471
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 15/181 (8%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+++ Y+ ++ +LG D L M G P+ TY IL+ L K DK + A
Sbjct: 642 PNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMY 701
Query: 138 LNHMKEVGFDPSVLHFTTLMDGL------------SRAGNL---DACKYFFDEMANKGCM 182
+M P+ +L+ GL S NL A F + N C
Sbjct: 702 FEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCD 761
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P Y +I S L +A DL + M KG P+ T+ S++ GFC GK E T+
Sbjct: 762 PRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTI 821
Query: 243 M 243
+
Sbjct: 822 L 822
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 136/272 (50%), Gaps = 7/272 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAI--LHALLGIRQYKLIEWVYQ 69
T+N LI G + + F + + P + +Y + LH+ G + +YQ
Sbjct: 104 TYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMD--MYQ 161
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M G+ PD TY++++ + GK+ + +L +EM GF+P TYNI++ + K
Sbjct: 162 KMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSG 221
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ A+ L N M++ GF P + ++ +M+ L + G+L + F+EM G +PD Y
Sbjct: 222 NYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYG 281
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
VM+ + A E+A + + M+ G PNV NS++ + +FD A +++ M++
Sbjct: 282 VMVDMWGKARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAW 341
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G P + L+S+ + A+ H+V+ M
Sbjct: 342 GLVPTLQTHTILLSSCTAS---AQHHQVVNLM 370
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 3/224 (1%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
K +W +Q EGY D+ TY ++ R + RLL EM R G P TYN L
Sbjct: 52 KFFDWAKEQ---EGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRL 108
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H G+ + A+ + M+E G P + + TL+D S+AG D + +M G
Sbjct: 109 IHAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGF 168
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD Y+V+I AG++ +A LF+ M+ +G P++ TYN +I +G + A
Sbjct: 169 QPDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMK 228
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +M+ G +P+ + Y+ ++ L G L EA + M + G
Sbjct: 229 LYNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAG 272
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 109/239 (45%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++ + R ++ + Q+M EG P ++TYN ++ A R L + R+ +M
Sbjct: 69 TYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQM 128
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G SPD TY L+ + K A+++ M++ GF P ++ ++ L +AG +
Sbjct: 129 QEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKV 188
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
F+EM +G P +V Y ++I +G A L++ M G P+ TY+ M
Sbjct: 189 SEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIM 248
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ G EA M EME G P+ +Y +V A A E + M++ G
Sbjct: 249 MEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSG 307
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 116/243 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+ L+ + G ++ + K + F+P +Y+ I+H L +
Sbjct: 128 MQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGK 187
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++++M + G+AP ++TYNI++ + + G +L ++M +GF PD TY+I
Sbjct: 188 VSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSI 247
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ VLG+ A + N M++ G+ P + ++D +A N + ++ +M + G
Sbjct: 248 MMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAERALEWYQKMLDSG 307
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V ++ SY+ + + A + + M G +P + T+ ++ + + +
Sbjct: 308 LTPNVQISNSLLGSYLRMQQFDLAFGVIETMKAWGLVPTLQTHTILLSSCTASAQHHQVV 367
Query: 241 TMM 243
+M
Sbjct: 368 NLM 370
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
H NIL + + D L AL+ +N S H ++ +G A K+F
Sbjct: 7 HVCNILRQLNWRPDT-LVALSRVNRTL------SAFHINEVLKHQKESG--LALKFFDWA 57
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+G DV YT MI A E L M +G P V TYN +I + A
Sbjct: 58 KEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANF 117
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +M+ GC+P+ + Y TLV AG A ++ + M + G
Sbjct: 118 LGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAG 167
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 126/243 (51%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P YN ++ L + + M +G P+ +TYN ++ GKLD+ L
Sbjct: 255 PSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L+ M S P+ TY L++ L K + + LL M+E G+ + ++ L+ GL +
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFK 374
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + + +MA KGC P++V Y+ +I G+ +A+++ +GMI+ G LPNV+T
Sbjct: 375 EGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYT 434
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y+S+++GF G +EA + +EM+ GC+ N Y+ L+ L G++ EA V M+
Sbjct: 435 YSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKML 494
Query: 283 EKG 285
G
Sbjct: 495 TIG 497
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 146/315 (46%), Gaps = 40/315 (12%)
Query: 11 RTFNILICTCGEVGLARKVVERFIK-SKLFNFRPFKNSYNAILHALL--GI--RQYKLIE 65
R+F ++ G+ L K V+ F + F + S+N++L+ ++ G+ R + +
Sbjct: 113 RSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYD 172
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+V + +P+ L++N+V+ A +LG +D+ + M PD +TY L+ L
Sbjct: 173 YVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGL 232
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ++ A+ LL+ M+ G PS + + L+DGL + G+L D M KGC P+
Sbjct: 233 CKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNE 292
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA------------ 233
V Y +I G+L+KA L + M++ +PN TY ++I G
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLIS 352
Query: 234 -----------------------GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
GK +EA T+ K+M +GC PN +VY+ ++ L GK
Sbjct: 353 MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGK 412
Query: 271 LAEAHEVIRHMVEKG 285
EA E++ M+ G
Sbjct: 413 PNEAKEILNGMISSG 427
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 132/285 (46%), Gaps = 6/285 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G + +N+LI C G++ K+V+ F P + +YN ++H L
Sbjct: 248 MQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCF---PNEVTYNTLIHGLCL 304
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++M P+ +TY ++ + + RLL M G+ + H
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHI 364
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L+ L K K A+ L M E G P+++ ++ ++DGL R G + K + M
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ GC+P+V Y+ ++ + G E+A ++ M G N F Y+ +I G C G+
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
EA + +M + G P+ + Y++++ L G + A ++ M+
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEML 529
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 45/309 (14%)
Query: 6 FPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ-- 60
FP T+N LI C G++ A ++ER + SK P +Y +++ L+ R+
Sbjct: 289 FPNEV-TYNTLIHGLCLKGKLDKAVSLLERMVSSKCI---PNDVTYGTLINGLVKQRRAM 344
Query: 61 -------------YKLIEWVY--------------------QQMSDEGYAPDILTYNIVM 87
Y+L + +Y ++M+++G P+I+ Y+ V+
Sbjct: 345 DGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVI 404
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
R GK ++ +L+ M SG P+ +TY+ L+ K A+ + M E G
Sbjct: 405 DGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCS 464
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
+ ++ L+DGL G + + +M G PD V Y+ MI G ++ A L
Sbjct: 465 RNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKL 524
Query: 208 FDGMITKGQ---LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+ M+ + + P+V TYN ++ G CM A ++ M RGC+P+ + NT ++
Sbjct: 525 YHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNT 584
Query: 265 LRNAGKLAE 273
L E
Sbjct: 585 LSEKSDSCE 593
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 101/245 (41%), Gaps = 23/245 (9%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI +G T++ L+ + GL+ + ++ + + + Y+ ++ L G+ +
Sbjct: 423 MISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGR 482
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM---GRSGFSPDFHT 117
K V+ +M G PD + Y+ ++ +G +D +L EM PD T
Sbjct: 483 VKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVT 542
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDAC---KYFFD 174
YNILL L A++LLN M + G DP V+ T ++ LS D+C + F +
Sbjct: 543 YNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKS--DSCEEGRSFLE 600
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
E ++ + + A + + M+ K P T+ ++ C
Sbjct: 601 E---------------LVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMIVPEICKPK 645
Query: 235 KFDEA 239
K + A
Sbjct: 646 KINAA 650
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ LA+ V + K + RP S+N +++ +
Sbjct: 127 VLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITK---WGLRPSVVSFNTLINGYIK 183
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD+ TY+I++ + GKLD+ + L +EM +G P+ T
Sbjct: 184 LGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVT 243
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+H K +K A+ + M G P ++ + TL+ GL + G L DEM
Sbjct: 244 FTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMI 303
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD + YT +I G+LE A +L + MI + + Y ++I C G+
Sbjct: 304 MNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAG 363
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A M++EM S G P+ Y +++ A +++R M G
Sbjct: 364 DAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDG 411
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++ + +L + V+ ++ G P ++++N ++ +LG LD+ RL M
Sbjct: 139 FNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY+IL++ L K K A L N M + G P+ + FTTL+ G + +D
Sbjct: 199 ASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++G PD++ Y +I GEL++ DL D MI G P+ +Y ++I
Sbjct: 259 LAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A + +M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 379 PDNGTYTMIINEF 391
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 98/181 (54%)
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
E+ G+ + +NIL+ K + A ++ + + + G PSV+ F TL++G + G
Sbjct: 126 EVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
+LD M G PDV Y+++I G+L++A +LF+ M+ G +PN T+
Sbjct: 186 DLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFT 245
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++I G C K D A + K+M S+G +P+ + YNTL+ L G+L + H++I M+
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 285 G 285
G
Sbjct: 306 G 306
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 101/225 (44%), Gaps = 6/225 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +G T++ILI C G++ A ++ + + L P ++ ++H
Sbjct: 197 MHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLV---PNGVTFTTLIHGHCK 253
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ L +Y+QM +G +PD++TYN ++ + G+L Q H L+DEM +G PD +
Sbjct: 254 NEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKIS 313
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L+ K AL L N M + + +T L+ L R G + EM
Sbjct: 314 YTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREML 373
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ G PD YT++I + + + A L M G +P V T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGPVPGVVT 418
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%)
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F+ E+ G + + +++ + GE+ AQ +FD + G P+V ++N++I G+
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G DE + M + G P+ Y+ L++ L GKL EA+E+ M++ G
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNG 236
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 135/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E GF T+N LI C G+V K+ +K + P +YN ++H +
Sbjct: 517 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI---EPDTFTYNLLIHGMCR 573
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++ + P++ TY +++ + K+++ +L E+ +
Sbjct: 574 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 633
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ + + A L + M+ G P+ +++L+ G+ G ++ K DEM
Sbjct: 634 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 693
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G +P+VVCYT +I Y G+++K ++ M + PN TY MI G+ +G
Sbjct: 694 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 753
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ EM +G P+ + YN L + GK+ E ++ +M ++G
Sbjct: 754 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEG 801
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 126/274 (45%), Gaps = 35/274 (12%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ NA++H L + + ++M + G+ D +TYN ++ + GK+++ +L EM
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ G PD TYN+L+H + + K A+NL N K P+V + ++DG +A +
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612
Query: 167 DACKYFF-----------------------------------DEMANKGCMPDVVCYTVM 191
+ + F D+M +KG P Y+ +
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I G +E A+ L D M +G LPNV Y ++I G+C G+ D+ +++EM S
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+PN + Y ++ +G + A +++ MV KG
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 766
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 128/261 (49%), Gaps = 1/261 (0%)
Query: 32 RFIKSKLF-NFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAK 90
RF++ L N RP ++ L ++ ++ ++ ++G+ +++T N ++
Sbjct: 442 RFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGL 501
Query: 91 YRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSV 150
+ G + + RLL +M GF D TYN L+ K K L M + G +P
Sbjct: 502 CKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT 561
Query: 151 LHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
+ L+ G+ R G LD ++E ++ +P+V Y VMI Y A ++E+ + LF
Sbjct: 562 FTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTE 621
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
++T+ N YN++IR +C G EA + +M S+G P Y++L+ + N G+
Sbjct: 622 LLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGR 681
Query: 271 LAEAHEVIRHMVEKGKYIHLV 291
+ +A +I M ++G ++V
Sbjct: 682 MEDAKCLIDEMRKEGLLPNVV 702
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 132/271 (48%), Gaps = 20/271 (7%)
Query: 21 GEVGLARKVVERFIKSKLFNFR--PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAP 78
GE G+A V+ I FR F+N+ V++ ++++G P
Sbjct: 168 GESGVAVAAVDLLIHVYCTQFRNVGFRNAIG-----------------VFRFLANKGVFP 210
Query: 79 DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
+ T ++ + + +L++ + + + M R G SPD + ++ ++ KG K A+ L
Sbjct: 211 TVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCKGGKVEDAIQLF 269
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M+++G P+V+ + L+ GL + GNLD F ++M G ++ Y+V+I +
Sbjct: 270 FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKL 329
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
+ +A + + KG PN YN++I G+C G +A + +M S+G NPN +
Sbjct: 330 EKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTL 389
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
N+++ G++ +A ++ M+ +G I+
Sbjct: 390 NSIIQGFCKIGQMEQAECILEEMLSRGFSIN 420
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 121/226 (53%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ M G +P+++TYN ++ + G LD+ R ++M + G + TY++L++ L
Sbjct: 268 LFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLM 327
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +K A ++L E GF P+ + + TL+DG + GNL +M +KG P+ V
Sbjct: 328 KLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSV 387
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+I + G++E+A+ + + M+++G N + ++I CM +F+ A ++EM
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
R PN + TLV L GK ++A E+ ++EKG +LV+
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 493
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 126/272 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++ G T+N+LI +G + V + + K + P +Y ++ +
Sbjct: 552 MVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADK 611
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ E ++ ++ + + + YN ++ A R G + +L D+M G P TY+
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+H + + A L++ M++ G P+V+ +T L+ G + G +D EM++
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + YTVMI Y +G+++ A L M+ KG +P+ TYN + GFC GK +E
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ M G + + Y TLV + L
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHGWQQPSALT 823
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 125/253 (49%), Gaps = 3/253 (1%)
Query: 30 VERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
V RF+ +K P + +L +L+ + + WV++ M +G +PD+ ++ + A
Sbjct: 199 VFRFLANK--GVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINA 255
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
+ GK++ +L +M + G SP+ TYN L+H L K A M + G + +
Sbjct: 256 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
++ ++ L++GL + + E KG P+ V Y +I Y G L A +
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M++KG PN T NS+I+GFC G+ ++A +++EM SRG + N + T++ L
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 435
Query: 270 KLAEAHEVIRHMV 282
+ A +R M+
Sbjct: 436 RFESALRFLREML 448
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 6/286 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+E GF +N LI C G +G A ++ + SK N P + N+I+ I
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV-SKGIN--PNSVTLNSIIQGFCKI 399
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Q + E + ++M G++ + + ++ + + R L EM P+
Sbjct: 400 GQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLL 459
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ L K K A+ L + E GF +++ L+ GL + GN+ +M
Sbjct: 460 TTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLE 519
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G + D + Y +I+ G++E+ L M+ +G P+ FTYN +I G C GK DE
Sbjct: 520 RGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDE 579
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A + E +SR PN Y ++ A K+ E ++ ++ +
Sbjct: 580 AVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQ 625
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 131/284 (46%), Gaps = 6/284 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T+N LI C G + A + E+ +K + +Y+ +++ L+ + ++
Sbjct: 276 GVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGV---NATLITYSVLINGLMKLEKF 332
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V ++ ++G+ P+ + YN ++ ++G L R+ +M G +P+ T N +
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K + A +L M GF + FTT++ L ++ F EM +
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ T ++ G+ A +L+ ++ KG N+ T N++I G C G EA
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++K+M RG + + YNTL+S GK+ E ++ MV++G
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQG 556
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 130/278 (46%), Gaps = 8/278 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+++G T T+++LI + A V++ ++ F P + YN ++
Sbjct: 307 MVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEK---GFTPNEVVYNTLIDGYCK 363
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M +G P+ +T N ++ ++G+++Q +L+EM GFS +
Sbjct: 364 MGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGA 423
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG-NLDACKYFFDEM 176
+ ++H L + +AL L M P+ TTL+ GL + G + DA + +F +
Sbjct: 424 FTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWF-RL 482
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
KG ++V +I G +++A L M+ +G + + TYN++I G C GK
Sbjct: 483 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 542
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+E + EM +G P+ YN L+ + GKL EA
Sbjct: 543 EEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 580
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
F +ANKG P V T +++S + A ELEK+ +F+ M +G P+V+ +++ I FC
Sbjct: 200 FRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM-RQGVSPDVYLFSTAINAFCK 258
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
GK ++A + +ME G +PN + YN L+ L G L EA MV+ G L++
Sbjct: 259 GGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLIT 318
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 7/286 (2%)
Query: 3 ENGFPTTARTFNILICTCGE---VGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E GF +T+ I++ G + +AR + K + +N+++ +
Sbjct: 110 EKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAG 169
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTY 118
+K +++ M G +P ++T+N V+ + G+ + + DEM ++ G PD +TY
Sbjct: 170 LFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTY 229
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NIL+ K M DP V+ + TL+DGL RAG + + M+
Sbjct: 230 NILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSK 289
Query: 179 K--GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
K PDVV YT +I Y E+++A D+ + M +G PN+ TYN++I+G C A K+
Sbjct: 290 KCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKW 349
Query: 237 DEACTMMKEMESRGCN-PNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
D+ ++++M+ G + P+ +NTL+++ AG L EA +V +M
Sbjct: 350 DKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENM 395
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 133/278 (47%), Gaps = 4/278 (1%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
R FN LI + GE GL ++ V+ F KL P ++N++L LL + + + VY +
Sbjct: 156 RFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDE 215
Query: 71 M-SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
M G PD TYNI++ + +D+ EM PD TYN L+ L +
Sbjct: 216 MLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAG 275
Query: 130 KPLAALNLLNHMKEVGFD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
K A NL+N M + D P V+ +TTL+ G R +D +EM +G P++V
Sbjct: 276 KIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVT 335
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKG-QLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I A + +K +++ + M G +P+ T+N++I C AG DEA + + M
Sbjct: 336 YNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENM 395
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ + + Y+ L+ L G +A + + EK
Sbjct: 396 KKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEK 433
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 110 GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH---FTTLMDGLSRAGNL 166
GFS + TY I+L +LG+ A N L +++ L F +L+ AG
Sbjct: 112 GFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLF 171
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI-TKGQLPNVFTYNS 225
F+ M G P VV + ++ + G A++++D M+ T G P+ +TYN
Sbjct: 172 KESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNI 231
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+IRGFC DE KEM S C+P+ + YNTLV L AGK+ AH ++ M +K
Sbjct: 232 LIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKC 291
Query: 286 K 286
K
Sbjct: 292 K 292
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 119/289 (41%), Gaps = 11/289 (3%)
Query: 10 ARTFNILI---CTCGEVGLARKVVERFIKSKL----FNFRPFKNSYNAILHALLGIRQYK 62
+ ++++LI C G+ G A + + + ++ + +P SY + L + K
Sbjct: 404 SASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTK 463
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
E V +Q+ G D L+Y IV+ + G + + LL M R F PD Y+ L+
Sbjct: 464 KAERVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLI 522
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
+ DKPL A L M + + P + ++++ L G + M +
Sbjct: 523 DGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERNIR 582
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
++ T + G +KA + + + G + +++ C + EAC +
Sbjct: 583 QNINFSTKCLQLLFDRGLQDKAFKITELIYKNG---FCVKMDEVVQFLCNKRRALEACKL 639
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ N + + N ++ +L K +EA + +V+KG + L+
Sbjct: 640 LLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGLHQDLI 688
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 119/220 (54%), Gaps = 4/220 (1%)
Query: 68 YQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Q+M + G P I +YN ++ A L++ L G P+ TYNIL+ +
Sbjct: 101 FQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISV 160
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + + A LL+ M P V + T+++G+ ++G+L + FDEM +G +PDV+
Sbjct: 161 KKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVM 220
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQL--PNVFTYNSMIRGFCMAGKFDEACTMMK 244
CY +MI + G+ + +++++ ++ KG PNV TYN MI G C G+FDE+ M +
Sbjct: 221 CYNIMIDGFFKRGDYVQGKEIWERLV-KGSCVYPNVVTYNVMINGLCKMGRFDESLEMWE 279
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M+ C + Y++L+ L + G + A EV + MV++
Sbjct: 280 RMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKR 319
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 120/242 (49%), Gaps = 1/242 (0%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
++F +P SYNA+L+A + + E G P++ TYNI++ + +
Sbjct: 106 EIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQF 165
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+ LLD M PD ++Y +++ + K ++AL + + M E G P V+ + +
Sbjct: 166 VEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIM 225
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCM-PDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+DG + G+ K ++ + C+ P+VV Y VMI G +++ ++++ M
Sbjct: 226 IDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNE 285
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
++FTY+S+I G C G D A + KEM R + + YN L++ AGK+ E+
Sbjct: 286 CEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESF 345
Query: 276 EV 277
E+
Sbjct: 346 EL 347
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN + L R+ + V++ + G D TY +++ + G L++ ++L E
Sbjct: 361 SYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEA 420
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G D Y+ ++ L K + AL +++ M + G + S L++G RA L
Sbjct: 421 KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKL 480
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ FF EM KGC P VV Y +I A A M+ K P++ TY+ +
Sbjct: 481 EEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ G C K D A + +++ +G P+ ++N L+ L +AGK+ +A + +M +
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNC 600
Query: 287 YIHLVS 292
+LV+
Sbjct: 601 LPNLVT 606
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 122/269 (45%), Gaps = 3/269 (1%)
Query: 27 RKVVERFIKSKLFNFR---PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTY 83
RKV E +L R +Y ++H L + ++ D G D Y
Sbjct: 373 RKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAY 432
Query: 84 NIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKE 143
+ ++ + G++D+ ++ +M + G H N L++ + K A+ M+
Sbjct: 433 SSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMET 492
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G P+V+ + TL++GL +A F EM K PD++ Y++++ +++
Sbjct: 493 KGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDM 552
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A +L+ ++ KG P+V +N ++ G C AGK ++A + M+ C PN + +NTL+
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMD 612
Query: 264 NLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L A + A + M + G ++S
Sbjct: 613 GLYKARECEMASVIWACMFKNGFQPDIIS 641
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 2/216 (0%)
Query: 58 IRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+R KL E + +++M +G +P +++YN ++ + + + + EM + PD
Sbjct: 475 VRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDM 534
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY++L+ L +G K ALNL + G +P V LM GL AG ++ +
Sbjct: 535 ITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSN 594
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M C+P++V + ++ A E E A ++ M G P++ +YN ++G C G+
Sbjct: 595 MKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGR 654
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ + + G P + + LV + G L
Sbjct: 655 ISDGIALFDDALKNGILPTSITWYILVRAVLKLGPL 690
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 2/276 (0%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
R++N L+ E L K + P +YN ++ + RQ+ + +
Sbjct: 115 RSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDW 174
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VLGKGD 129
M + PD+ +Y V+ + G L + DEM G PD YNI++ +GD
Sbjct: 175 MWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGD 234
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+K P+V+ + +++GL + G D ++ M C D+ Y+
Sbjct: 235 YVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYS 294
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G ++ A +++ M+ + + +V TYN+++ GFC AGK E+ + M
Sbjct: 295 SLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKE 354
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C+ N + YN + L K+ EA V + +G
Sbjct: 355 NCH-NVVSYNIFIRGLFENRKVEEAISVWELLRRRG 389
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SYN +++ L ++ ++M ++ + PD++TY+++M + K+D L
Sbjct: 497 PTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNL 556
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
++ G PD +NIL+H L K AL L ++MK+ P+++ TLMDGL +
Sbjct: 557 WRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYK 616
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
A + + M G PD++ Y + + + G + LFD + G LP T
Sbjct: 617 ARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSIT 676
Query: 223 YNSMIRGFCMAGKFD 237
+ ++R G D
Sbjct: 677 WYILVRAVLKLGPLD 691
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
R KL++ EM G SP +YN L++ L K ++ A + + M E + P ++
Sbjct: 476 RASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMI 535
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
++ LMDGL + +D + ++ KG PDV + +++ +AG++E A L+ M
Sbjct: 536 TYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNM 595
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
LPN+ T+N+++ G A + + A + M G P+ + YN + L + G++
Sbjct: 596 KQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRI 655
Query: 272 AEAHEVIRHMVEKG 285
++ + ++ G
Sbjct: 656 SDGIALFDDALKNG 669
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 131/322 (40%), Gaps = 41/322 (12%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G +NI+I G+ +++ ER +K P +YN +++ L
Sbjct: 210 MFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCV--YPNVVTYNVMINGLCK 267
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ ++ ++++M D+ TY+ ++C +G +D + EM + D T
Sbjct: 268 MGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVT 327
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN LL+ + K + L M + +V+ + + GL ++ ++ +
Sbjct: 328 YNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLR 386
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS------------ 225
+G D Y V+I G L KA + G + F Y+S
Sbjct: 387 RRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVD 446
Query: 226 -----------------------MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+I GF A K +EA +EME++GC+P + YNTL+
Sbjct: 447 EALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLI 506
Query: 263 SNLRNAGKLAEAHEVIRHMVEK 284
+ L A + ++A+ ++ M+EK
Sbjct: 507 NGLCKAERFSDAYSFVKEMLEK 528
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 91/205 (44%), Gaps = 6/205 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T ++N LI C A V+ ++ +++P +Y+ ++ L
Sbjct: 490 METKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEK---DWKPDMITYSLLMDGLCQ 546
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + +++Q+ +G PD+ +NI+M GK++ L M +S P+ T
Sbjct: 547 GKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVT 606
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N L+ L K + A + M + GF P ++ + + GL G + FD+
Sbjct: 607 HNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDAL 666
Query: 178 NKGCMPDVVCYTVMITSYIAAGELE 202
G +P + + +++ + + G L+
Sbjct: 667 KNGILPTSITWYILVRAVLKLGPLD 691
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 76/171 (44%), Gaps = 6/171 (3%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E + T+++L +C ++ +A + + + L P +N ++H L
Sbjct: 525 MLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGL---EPDVTMHNILMHGLCS 581
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +Y M P+++T+N +M Y+ + + + M ++GF PD +
Sbjct: 582 AGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIIS 641
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
YNI L L + + L + + G P+ + + L+ + + G LD+
Sbjct: 642 YNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDS 692
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 9/278 (3%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ L T + R + F+K K + F P S NA L ++L +++ +L+ Y+QM
Sbjct: 153 FDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMR 212
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
+P++ T N+V+ A +LG+L++ +L++M G P+ T+N L+ G DK L
Sbjct: 213 RNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLIS--GYCDKGL 270
Query: 133 AALNLLNH---MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
L L M + G P+V+ F TL++G + G L F EM P+VV Y
Sbjct: 271 LGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYN 330
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I + AG E LF+ M ++ TYN +I G C GK +A M+KE++
Sbjct: 331 TLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKG 390
Query: 250 GCNPNFLVYNTLVSN--LRNAGKLAEAHEVIRHMVEKG 285
PN ++ L++ +RN + A V R MV G
Sbjct: 391 NLVPNASTFSALIAGQCVRNNSE--RAFLVYRSMVRSG 426
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 15/278 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHA--- 54
M N T N+++ C GE+ A +V+E K K P ++N+++
Sbjct: 211 MRRNRISPNVYTINMVVSAYCKLGELNKASEVLE---KMKDMGLCPNVVTFNSLISGYCD 267
Query: 55 --LLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
LLG+ K+ + + M G P+++T+N ++ + GKL + +R+ EM + +
Sbjct: 268 KGLLGL-ALKVRDLM---MGKNGVFPNVVTFNTLINGFCKEGKLHEANRVFSEMKLANVA 323
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
P+ TYN L++ G+ + L M+ +L + L+ GL + G Y
Sbjct: 324 PNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYM 383
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
E+ +P+ ++ +I E+A ++ M+ G PN T+ + FC
Sbjct: 384 VKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCK 443
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
FD A ++++M R P+ + + + S L G+
Sbjct: 444 NEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGR 481
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 7/257 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFI-KSKLFNFRPFKNSYNAILHALL 56
M + G TFN LI C G +GLA KV + + K+ +F P ++N +++
Sbjct: 246 MKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVF---PNVVTFNTLINGFC 302
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ V+ +M AP+++TYN ++ + G + L +EM R+ D
Sbjct: 303 KEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADIL 362
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ L K K A ++ + + P+ F+ L+ G N + + M
Sbjct: 363 TYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRSM 422
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G P+ + ++ +++ + + A + M+ + P+ + + G C G+
Sbjct: 423 VRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGRK 482
Query: 237 DEACTMMKEMESRGCNP 253
A + E+E++ P
Sbjct: 483 QFALMLCSEIEAKRLLP 499
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 13/187 (6%)
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD--PSVLH-----------FTTLMD 158
S HT++ LLH+L K A ++ + + + S+LH F TL
Sbjct: 99 SHTLHTHSFLLHILTKNRNFKTAQSIFSKIITTNSNLFESLLHSYTLCNSSPLVFDTLFK 158
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP 218
+ L F +M G P V ++S + E + M P
Sbjct: 159 TFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISP 218
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
NV+T N ++ +C G+ ++A ++++M+ G PN + +N+L+S + G L A +V
Sbjct: 219 NVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVR 278
Query: 279 RHMVEKG 285
M+ K
Sbjct: 279 DLMMGKN 285
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 6/230 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +NG TFN LI C G++ A +V F + KL N P +YN +++
Sbjct: 282 MGKNGVFPNVVTFNTLINGFCKEGKLHEANRV---FSEMKLANVAPNVVTYNTLINGFGQ 338
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ ++++M DILTYN ++ + GK + ++ E+ + P+ T
Sbjct: 339 AGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNAST 398
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ + A + M GF P+ F L + + D +M
Sbjct: 399 FSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDML 458
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ PD + + + G + A L + K LP F ++
Sbjct: 459 ERFMTPDSSILSEVYSGLCRCGRKQFALMLCSEIEAKRLLPQGFDREKIV 508
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 127/254 (50%), Gaps = 3/254 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GE R + E IKS+ F P SY+ ++H L+ ++ M ++G D
Sbjct: 531 GEPEKGRAMFEE-IKSR--RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
YNIV+ + GK+++ ++LL+EM GF P TY ++ L K D+ A L
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
K + +V+ +++L+DG + G +D +E+ KG P+V + ++ + + A E
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEE 707
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+ +A F M PN TY +I G C KF++A +EM+ +G P+ + Y T
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 261 LVSNLRNAGKLAEA 274
++S L AG +AEA
Sbjct: 768 MISGLAKAGNIAEA 781
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 1/281 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF + T ++ +C + R+ + + F FRP ++Y ++ A + ++
Sbjct: 128 GFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMM 187
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++QQM + GY P + + ++ + G++D LLDEM S D YN+ +
Sbjct: 188 LTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDS 247
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
GK K A + ++ G P + +T+++ L +A LD F+ + +P
Sbjct: 248 FGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPC 307
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
Y MI Y +AG+ ++A L + KG +P+V YN ++ GK DEA + +
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFE 367
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM+ + PN YN L+ L AGKL A E+ M + G
Sbjct: 368 EMK-KDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAG 407
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
SYN++L + R + ++ + +MS G+ P + T ++ + + KL + ++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNM 159
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ F P F Y L+ + L L M+E+G++P+V FTTL+ G ++ G +
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D+ DEM + D+V Y V I S+ G+++ A F + G P+ TY SM
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
I C A + DEA M + +E P YNT++ +AGK EA+ ++ KG
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 287 YIHLVS 292
+++
Sbjct: 340 IPSVIA 345
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 145/297 (48%), Gaps = 6/297 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G R +NI+I C CG+V A +++E +K+K F P +Y +++ L
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEE-MKTK--GFEPTVVTYGSVIDGLAK 634
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ + +++ Y+ ++ ++G++D+ + +L+E+ + G +P+ +T
Sbjct: 635 IDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYT 694
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL MKE+ P+ + + L++GL + + F+ EM
Sbjct: 695 WNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQ 754
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P + YT MI+ AG + +A LFD G +P+ YN+MI G +
Sbjct: 755 KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAM 814
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKF 294
+A ++ +E RG + + L+ L L +A V + E GK H +
Sbjct: 815 DAFSLFEETRRRGLHIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARHAARSW 871
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 112/219 (51%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++++ + PD +Y+I++ + G ++ + L M G D YNI++
Sbjct: 539 MFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K K A LL MK GF+P+V+ + +++DGL++ LD F+E +K +VV
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVV 658
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I + G +++A + + ++ KG PNV+T+NS++ A + +EA + M
Sbjct: 659 IYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ C PN + Y L++ L K +A + M ++G
Sbjct: 719 KELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M D + + Y ++ + G+ + H++ +M SPD N + +
Sbjct: 469 IYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMF 528
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K +P + +K F P ++ L+ GL +AG + F M +GC+ D
Sbjct: 529 KAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I + G++ KA L + M TKG P V TY S+I G + DEA + +E
Sbjct: 589 AYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S+ N ++Y++L+ G++ EA+ ++ +++KG
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N +I G G + + + P +YN IL L + + V+++M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ AP++ TYNI++ R GKLD L D M ++G P+ T NI++ L K K
Sbjct: 370 KKDA-APNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A + M P + F +L+DGL + G +D +++M + C + + YT +
Sbjct: 429 DEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSL 488
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I ++ G E ++ M+ + P++ N+ + AG+ ++ M +E++SR
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRF 548
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ Y+ L+ L AG E +E+ M E+G
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQG 582
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 134/282 (47%), Gaps = 8/282 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+NILI C G++ A ++ + K+ LF P + N ++ L ++ ++
Sbjct: 379 TYNILIDMLCRAGKLDCAFELRDSMQKAGLF---PNVRTVNIMVDRLCKSQKLDEACAIF 435
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+QM + PD +T+ ++ ++G++D +++ ++M S + Y L+
Sbjct: 436 EQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + M P + T MD + +AG + + F+E+ ++ +PD Y
Sbjct: 496 GRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSY 555
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I I AG + +LF M +G + + YN +I GFC GK ++A +++EM++
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
+G P + Y +++ L +L EA+ + K K I L
Sbjct: 616 KGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA--KSKRIEL 655
>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 1219
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ +M +G PD +TY V+ + G+++ R ++M SP YN L+H L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK A L+ M + G + F +++D + G + + FD M G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I Y AG++++A L M++ G P+ TYN++I G+C + ++A + +EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
ES G +P+ + YN ++ L + A A E+ + E G + L
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 4/201 (1%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+CA R D +L M + G P+ +YNILL L ++ AL LL M + G
Sbjct: 136 LCADKRTS--DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGG 193
Query: 147 D--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
D P V+ +TT+++G + G+LD + EM ++G +P+VV Y+ +I + A ++KA
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKA 253
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++ M+ G +PN TYNS++ G+C +G+ EA +K+M S G P+ + YN+L+
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 314 LCKNGRCTEARKMFDSMTKRG 334
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG RT+N ++ G ++ + K P +YN+++ L +
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G P+I TY ++ G L + H LLD M R+G P+ + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+ K K A+ + + M++ G +P + + T++ L ++G + DA +YF
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 173 -----------------FD----------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
FD EM ++G D + + +I S+ G + +++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G P++ TY+++I G+C+AGK DEA ++ M S G P+ + YNTL++
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ +A + R M G
Sbjct: 560 CKISRMEDALVLFREMESSG 579
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +M D G P+++TY+ ++ A + +D+ +L M ++G P+ TYN ++H
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+P A+ L M G +P V+ + +LMD L + G + FD M +G P++
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ Y G L + L D M+ G PN + ++ +I + GK D+A + +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+G NP+ + Y T++ L +G++ +A M+++
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++I+ AL + V M G P+ TYN ++ G+ +
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TYN L+ L K + A + + M + G P + + TL+ G +
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G P+ ++++I +Y G++++A +F M +G P+ T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G+ ++A ++M +P +VYN+L+ +L K +A E+I M+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 283 EKG 285
++G
Sbjct: 472 DRG 474
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G V A + E+ I +L P YN+++H+L ++ + + +M D G
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERL---SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPL 132
D + +N ++ + + G++ + +L D M R G PD TY+ L+ + GK D+
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE-- 532
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A LL M VG P + + TL++G + ++ F EM + G PD++ Y +++
Sbjct: 533 -ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A++L+ G+ G + TYN ++ G C DEA M + +
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N ++ L G+ EA ++ + G
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 7/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ GF A F L+ C A +V R + P SYN +L L
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCD 174
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + Q M D+G PD+++Y V+ ++ G LD+ + EM G P+
Sbjct: 175 ENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV 234
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ ++ L K A+ +L M + G P+ + +++ G +G F +
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PDVV Y ++ G +A+ +FD M +G P + TY ++++G+ G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E ++ M G +PN V++ L+ GK+ +A V M ++G
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 17/314 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCL 526
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +TYN ++ ++ +++ L EM SG SPD T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +P+V TY+ M G +
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK---------GKYI 288
E + ME GC N + N++V L G + A + + EK ++
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766
Query: 289 HLVS--KFKRYKRC 300
L+S K++ Y C
Sbjct: 767 DLLSGGKYQEYHSC 780
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 127/253 (50%), Gaps = 6/253 (2%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + +L + V+ + G P ++++N +M R G LD+ RL M
Sbjct: 139 FNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMH 198
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SG PD +TY++L++ L K K A L M + G P+ + FTTL+DG + G +D
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVD 258
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ +M ++ PD++ Y +I G+L++A++L + M KG P+ TY ++I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLI 318
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV----- 282
G C G + A K M + + Y L+S L G+ +A +++R M+
Sbjct: 319 DGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 283 -EKGKYIHLVSKF 294
+ G Y ++++F
Sbjct: 379 PDSGTYTMIINEF 391
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 138/273 (50%), Gaps = 2/273 (0%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F+ LI E G R +E + ++ FR ++ +L L+ ++ +KL+ Y+++
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTREHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYKEIL 128
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH-VLGKGDKP 131
+ GY + +NI+M + G++ + D + + G P ++N L++ + +GD
Sbjct: 129 ECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLD 188
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
L + M G P V ++ L++GL + +D F EM +KG +P+ V +T +
Sbjct: 189 -KGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTL 247
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + G+++ A +++ M+++ P++ TYN++I G C G +A ++ EM +G
Sbjct: 248 IDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGL 307
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
P+ + Y TL+ G L A E + M+E+
Sbjct: 308 KPDKITYTTLIDGSCKDGDLETAFEYRKRMIEE 340
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 141/297 (47%), Gaps = 10/297 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E G+P + FNIL+ C GE+ L++ V + K + RP S+N +++
Sbjct: 127 ILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIRK---WGLRPSVVSFNTLMNGY-- 181
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
IRQ L + + M G PD+ TY++++ + K+D+ + L EM G P+
Sbjct: 182 IRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNG 241
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
T+ L+ K K A+ + M P ++ + TL+ GL + G+L + +E
Sbjct: 242 VTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINE 301
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M+ KG PD + YT +I G+LE A + MI + + Y ++I G C G+
Sbjct: 302 MSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGR 361
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+A M++EM S G P+ Y +++ G + ++++ M G +V+
Sbjct: 362 SVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 418
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 128/265 (48%)
Query: 28 KVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVM 87
KV E + P Y I+ + +++ + +M G P+++ YN V+
Sbjct: 249 KVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVL 308
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD 147
+ ++ LL EM + D T+NIL+ + + LL M E G
Sbjct: 309 KGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCM 368
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P V+ +TT+++G + G +D M + GC P+ + YT+++ + A++L
Sbjct: 369 PDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEEL 428
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
MI +G LPN T+N++I C G ++A ++K+M GCNP+ + Y+T++ L
Sbjct: 429 MSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGK 488
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
AGK EA E++ M+ KG ++++
Sbjct: 489 AGKTEEALELLNVMINKGITPNVIT 513
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 10/221 (4%)
Query: 75 GYAPDILTYNIVM---CAKYRLGKLDQF-------HRLLDEMGRSGFSPDFHTYNILLHV 124
G DI++YN V+ CA R G +++ H L +M + G +PD Y ++
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ K A +L+ M G P+V+ + T++ G+ A + + EM K C D
Sbjct: 276 ICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLD 335
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V + +++ + G +++ +L + M+ G +P+V TY ++I GFC G DEA ++K
Sbjct: 336 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 395
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M S GC PN + Y ++ L + + +A E++ M+++G
Sbjct: 396 NMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG 436
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 116/224 (51%), Gaps = 1/224 (0%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++IE + +QM + G PD++TY V+ + G +D+ LL M G P+ +Y I+
Sbjct: 354 RVIE-LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIV 412
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
L L ++ + A L++ M + G P+ + F T+++ L + G ++ +M GC
Sbjct: 413 LKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGC 472
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PD++ Y+ +I AG+ E+A +L + MI KG PNV TY+SM G+ D+
Sbjct: 473 NPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ 532
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M ++ + ++YN ++S+L + A + + +MV G
Sbjct: 533 MFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNG 576
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 134/298 (44%), Gaps = 7/298 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + P TFNIL+ + GL +V+E + P +Y +++ G +
Sbjct: 327 MYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN---GFCK 383
Query: 61 YKLIE---WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
LI+ + + M G P+ ++Y IV+ + L+ M + G P+ T
Sbjct: 384 EGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVT 443
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N +++ L K A+ LL M G +P ++ ++T++DGL +AG + + M
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI 503
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG P+V+ Y+ M + G ++K +FD + + YN++I C + D
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETD 563
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE-KGKYIHLVSKF 294
A + M S GC PN Y L+ L + G L EA +++ + + HL +F
Sbjct: 564 LAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLTRRF 621
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 123/255 (48%), Gaps = 3/255 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
IC G +A +++ R + +P YN +L + +++ E + +M +
Sbjct: 276 ICKEGHHEVANEILSRMPS---YGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNC 332
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
D +T+NI++ + G +D+ LL++M G PD TY +++ K A+
Sbjct: 333 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVM 392
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL +M G P+ + +T ++ GL + M +GC+P+ V + +I
Sbjct: 393 LLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLC 452
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
G +E+A +L M+ G P++ +Y+++I G AGK +EA ++ M ++G PN +
Sbjct: 453 KKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVI 512
Query: 257 VYNTLVSNLRNAGKL 271
Y+++ L G++
Sbjct: 513 TYSSMAFALAREGRI 527
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/221 (19%), Positives = 95/221 (42%), Gaps = 13/221 (5%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G A ++ YN ++ R+G+++ RL + P+ +TY ++ L + A
Sbjct: 79 GNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADA 135
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
L +L+ M P + +++ R+G + + + KG D ++I +
Sbjct: 136 LAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINA 195
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE--------- 245
G +++ ++ + G ++ +YN++++G C A ++ + +M E
Sbjct: 196 ICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALS 255
Query: 246 -MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M GC P+ +Y T++ + G A+E++ M G
Sbjct: 256 QMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYG 296
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 6/190 (3%)
Query: 94 GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHF 153
G+ R LD G + D YN ++ + + AA L V P+ +
Sbjct: 66 GRTADAVRALDAAGNAAGVVD---YNAMVAGYCRVGQVEAARRL---AAAVPVPPNAYTY 119
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
++ GL G + DEM ++ C+P Y V+I S +G A + + +
Sbjct: 120 FPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHA 179
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
KG + N +I C G DE M++++ GC + + YN ++ L A + +
Sbjct: 180 KGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGD 239
Query: 274 AHEVIRHMVE 283
E++ MV+
Sbjct: 240 VEELMDEMVK 249
>gi|357512797|ref|XP_003626687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520709|gb|AET01163.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 501
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 150/312 (48%), Gaps = 19/312 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G T ++ + CT V A ++++ + SK + P SYN ++ L
Sbjct: 154 MVSDGISPDKGTVDLAVRSLCTADRVDDAVELIKE-LSSK--HCSPDIYSYNFLVKNLCK 210
Query: 58 IRQYKLIEWVYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
R L+ +M + P+++TY I++ L + RL+D + GF PD
Sbjct: 211 SRTLSLVYAFIDEMRTKFDVKPNLVTYTILIDNVCNTKNLREATRLVDILEEEGFKPDCF 270
Query: 117 TYNILLH---VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
YN ++ +L +G + A+ + N MKE G +P ++ + TL+ GLS++G + K
Sbjct: 271 LYNTIMKGYCMLSRGSE---AIEVYNRMKEKGVEPDLITYNTLIFGLSKSGRVSEAKKLL 327
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
MA KG PD V YT ++ GE A L + M KG PN TYN+++ G C +
Sbjct: 328 RVMAEKGHFPDEVTYTSLMNGMCRKGETLAALALLEEMEMKGCSPNTCTYNTLLHGLCKS 387
Query: 234 GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK------GKY 287
FD+A + M+S G + Y T V L + G++A+A+EV + VE Y
Sbjct: 388 RMFDKAMELYGAMKSDGLKLDMASYATFVRALCSVGRVADAYEVFDYAVESKSLSDVAAY 447
Query: 288 IHLVSKFKRYKR 299
L S K +K+
Sbjct: 448 STLESTLKWFKK 459
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 125/294 (42%), Gaps = 41/294 (13%)
Query: 40 NFRPFKNSYNAIL-HALLGI-RQYKLIEWVYQQ---MSDEGYAPDILTYNIVMCAKYRLG 94
+F P K++Y+ +L H +Y + ++Q M +G +PD T ++ + +
Sbjct: 118 SFSPDKSTYHILLTHCCKSTDSKYSTLSLIHQTLNLMVSDGISPDKGTVDLAVRSLCTAD 177
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD------------------KP----- 131
++D L+ E+ SPD ++YN L+ L K KP
Sbjct: 178 RVDDAVELIKELSSKHCSPDIYSYNFLVKNLCKSRTLSLVYAFIDEMRTKFDVKPNLVTY 237
Query: 132 -------------LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
A L++ ++E GF P + T+M G ++ M
Sbjct: 238 TILIDNVCNTKNLREATRLVDILEEEGFKPDCFLYNTIMKGYCMLSRGSEAIEVYNRMKE 297
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
KG PD++ Y +I +G + +A+ L M KG P+ TY S++ G C G+
Sbjct: 298 KGVEPDLITYNTLIFGLSKSGRVSEAKKLLRVMAEKGHFPDEVTYTSLMNGMCRKGETLA 357
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A +++EME +GC+PN YNTL+ L + +A E+ M G + + S
Sbjct: 358 ALALLEEMEMKGCSPNTCTYNTLLHGLCKSRMFDKAMELYGAMKSDGLKLDMAS 411
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 121/245 (49%), Gaps = 4/245 (1%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
P +N ++ + IR KL ++ +M G P ++T+N +M + L+ +
Sbjct: 242 PEAKQFNMLMRDM--IRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSAN 299
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L M ++G +PD +TY + L K + A+ + M+E G +P+ + FTTL+D
Sbjct: 300 ALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAH 359
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ GN+ A EMA +G D+V Y + +L+ A D+ + M G P+
Sbjct: 360 CKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDK 419
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
TY ++I GFC G+ D A M +EM G + + Y TL+S L +G+ ++ ++
Sbjct: 420 VTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCE 479
Query: 281 MVEKG 285
M+E G
Sbjct: 480 MMEAG 484
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 127/271 (46%), Gaps = 19/271 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVG----LARKVVERFIKSKLFNFRPFKNSYNAILH 53
M E G F LI C G V L R++ R IK+ L +YNA+ +
Sbjct: 340 MRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLV-------AYNALAN 392
Query: 54 ALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSP 113
L +R K + ++M + G PD +TY ++ + G+LD + EM G +
Sbjct: 393 GLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVAL 452
Query: 114 DFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFF 173
D TY L+ L K + + + +L M E G +P +T ++D + ++
Sbjct: 453 DEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLL 512
Query: 174 DEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA 233
EM NKG P VV Y V++ + G+++ A L + M+ G P+ TYN ++ G C
Sbjct: 513 KEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVCPDDITYNILLDGHCKH 572
Query: 234 GKFDEACTMMKEMES-RGCNPNFLVYNTLVS 263
GK +A +E++S +G +F +Y +L++
Sbjct: 573 GKVRDA----EELKSAKGMVSDFGLYTSLIN 599
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 129/295 (43%), Gaps = 6/295 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+++ G P A+ FN+L+ G++ AR + + ++ + P ++N ++ +
Sbjct: 235 LLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGV---PPTVVTFNTLMSGMCK 291
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ M+ G APD+ TY M + G++ + +EM G +P+
Sbjct: 292 ASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVV 351
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ K A L L M G ++ + L +GL R +L A +EM
Sbjct: 352 FTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMR 411
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G PD V YT +I + GEL+ A ++ M +G + TY ++I G +G+
Sbjct: 412 NNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSV 471
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ ++ EM G P+ Y ++ + ++++ M KG+ +V+
Sbjct: 472 DSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVT 526
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G P T TFN L+ C ++ A + K+ + P +Y A + L
Sbjct: 270 MLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGV---APDVYTYGAFMQGLCK 326
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++++M + G P+ + + ++ A + G + L EM G D
Sbjct: 327 AGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVA 386
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L + L + AA +++ M+ G P + +TTL+DG + G LD EM+
Sbjct: 387 YNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMS 446
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++G D V YT +I+ +G ++ + M+ G P+ TY +I FC
Sbjct: 447 DEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+++G P + YN +++ G++ A ++ M+ G
Sbjct: 507 TGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIG 554
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 116/235 (49%), Gaps = 3/235 (1%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++++M+ G D++ YN + R+ L + +++EM +G PD TY L+
Sbjct: 371 LHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFC 430
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A+ + M + G + +TTL+ GLS++G + EM G PD
Sbjct: 431 KEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNT 490
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT++I ++ +++ L M KG+ P V TYN ++ GFC+ G+ A ++ M
Sbjct: 491 TYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAM 550
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV--IRHMVEK-GKYIHLVSKFKRYK 298
+ G P+ + YN L+ GK+ +A E+ + MV G Y L+++F + K
Sbjct: 551 LNIGVCPDDITYNILLDGHCKHGKVRDAEELKSAKGMVSDFGLYTSLINEFVKKK 605
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 14/237 (5%)
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKY--------------RLGKLDQFHRLLDEMGR 108
L+ V + +DEG PD + +++ + RL + + + ++
Sbjct: 178 LVSAVAKAYADEGLLPDGCSLLLLLALRRGVRVPLPAWSDLMNRLPSVPEAYAFYLQLLD 237
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+G P+ +N+L+ + + K +A N+ + M G P+V+ F TLM G+ +A +L++
Sbjct: 238 AGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNS 297
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
MA G PDV Y + AG ++ A ++F+ M +G PN + ++I
Sbjct: 298 ANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLID 357
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
C G + +EM +RG + + YN L + L L A++++ M G
Sbjct: 358 AHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNG 414
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 1/221 (0%)
Query: 66 WV-YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
W Y ++ D GY P+ +N++M ++G + + DE+ + G P ++N L+
Sbjct: 127 WAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISG 186
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
K L M+ P V F+ L++GL + G LD FDEM KG +P+
Sbjct: 187 CCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPN 246
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V +TV+I G+++ A F M+ +G P++ TYN++I G C G EA ++
Sbjct: 247 GVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVN 306
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM + G P+ + + TL+ G + A E+ R MVE+G
Sbjct: 307 EMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEG 347
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 137/286 (47%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERF-IKSKLFNFR--PFKNSYNAILHALLGIR 59
+ G T +FN LI C + G V E F +K + + R P +++A+++ L
Sbjct: 170 KRGLRPTVVSFNTLISGCCKAG---AVEEGFRLKGVMESERVCPDVFTFSALINGLCKEG 226
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ ++ +M +G P+ +T+ +++ + + GK+D + M G PD TYN
Sbjct: 227 RLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYN 286
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L++ L K A L+N M G P + FTTL+DG + G++++ M +
Sbjct: 287 ALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEE 346
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G D V +TV+I+ G + A+ + M++ G P+ TY ++ FC G
Sbjct: 347 GIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMG 406
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+S G P + YN L++ L G++ A ++ M+ G
Sbjct: 407 FKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVG 452
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 97/195 (49%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+Q M +G PD++TYN ++ ++G L + RL++EM SG PD T+ L+ K
Sbjct: 270 FQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCK 329
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+AL + M E G + + FT L+ GL R G + + +M + G PD
Sbjct: 330 YGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPT 389
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
YT+++ + G + L M + G +P V TYN+++ G C G+ A ++ M
Sbjct: 390 YTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAML 449
Query: 248 SRGCNPNFLVYNTLV 262
+ G PN + YN L+
Sbjct: 450 NVGVAPNDITYNILL 464
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 111/238 (46%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
+N ++H + V+ ++ G P ++++N ++ + G +++ RL M
Sbjct: 145 FNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVME 204
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
PD T++ L++ L K + L + M G P+ + FT L+DG + G +D
Sbjct: 205 SERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVD 264
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
F M +G PD+V Y +I G+L++A+ L + M G P+ T+ ++I
Sbjct: 265 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLI 324
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C G + A + + M G + + + L+S L G++ +A ++R M+ G
Sbjct: 325 DGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAG 382
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 116/275 (42%), Gaps = 13/275 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G TF +LI C G+V LA K + + + RP +YNA+++ L
Sbjct: 238 MCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGV---RPDLVTYNALINGLCK 294
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVM--CAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ K + +MS G PD +T+ ++ C KY G ++ + M G D
Sbjct: 295 VGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKY--GDMESALEIKRRMVEEGIELDD 352
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ +L+ L + + A +L M GF P +T ++D + GN+ E
Sbjct: 353 VAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKE 412
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G +P VV Y ++ G+++ A+ L D M+ G PN TYN ++ G G
Sbjct: 413 MQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGS 472
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ E +G ++ Y LV+ K
Sbjct: 473 SVDVDIFNSE---KGLVKDYASYTALVNESSKTSK 504
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 76/150 (50%)
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+ G+ P+ F LM G + G + + + FDE+ +G P VV + +I+ AG +E
Sbjct: 135 DSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVE 194
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+ L M ++ P+VFT++++I G C G+ DE + EM +G PN + + L+
Sbjct: 195 EGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLI 254
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
GK+ A + + M+ +G LV+
Sbjct: 255 DGQCKGGKVDLALKNFQMMLAQGVRPDLVT 284
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
ELE++ + ++ G PN F +N ++ GFC G A + E+ RG P + +N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181
Query: 260 TLVSNLRNAGKLAEA 274
TL+S AG + E
Sbjct: 182 TLISGCCKAGAVEEG 196
>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
Length = 479
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 118/237 (49%), Gaps = 4/237 (1%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
NA+L L R+ + I V++++ + P+ L+Y ++ A R GK+D+ + EM R
Sbjct: 4 NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
PD TYN+++ L K + A+ M E P V+ + TL+ GL + G +
Sbjct: 64 EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGRVAQ 119
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
F M G P V YT +I + + E A L M ++ P V++Y S+I
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIIN 179
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G C K D+A + +EM+ GC P+ + YNTL+ L +L EA +++ MVE G
Sbjct: 180 GLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 7/264 (2%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G++ A + + KL P +YN ++ L R+ ++ M +
Sbjct: 45 LCRTGKIDKACSTIAEMAREKLV---PDVFTYNVVIDTLCKARRISRAIEFFETMPE--- 98
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PD++TYN ++ + G++ Q L M +G +P TY L+ V K + A
Sbjct: 99 -PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL M P+V + ++++GL + +D F+EM GC PD V Y +I
Sbjct: 158 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
L +A+DL M+ G P+ T+ ++I G C + EA + + M +GC P+ +
Sbjct: 218 VKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 277
Query: 257 VYNTLVSNLRNAGKLAEAHEVIRH 280
+ LVS L KL A V+R+
Sbjct: 278 THTVLVSKLCILRKLRPALSVVRN 301
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 122/267 (45%), Gaps = 12/267 (4%)
Query: 29 VVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV-- 86
VV R I S+ + +P SY ++ AL + +M+ E PD+ TYN+V
Sbjct: 21 VVFRRIFSQ--DCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVID 78
Query: 87 -MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
+C R+ + +F + E PD TYN LL L K + A +L M+ G
Sbjct: 79 TLCKARRISRAIEFFETMPE-------PDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAG 131
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
PS + +TTL+D + + MA++ C P V Y +I ++++A
Sbjct: 132 ITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAY 191
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF+ M G P+ TYN++I G C+ + EA ++ M G P+ + + L+ L
Sbjct: 192 QLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGL 251
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ EA + + M ++G LV+
Sbjct: 252 CTTDRIKEAFVLFQGMAKQGCAPDLVT 278
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 120/254 (47%), Gaps = 2/254 (0%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
F + KL +P + +YN ++H L ++ + + M + G+ PD +T+ ++
Sbjct: 194 FEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCT 253
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
++ + L M + G +PD T+ +L+ L K AL+++ + +V+
Sbjct: 254 TDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP--ACPEAVIL 311
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+T + L R D +MA +G P+VV YT E +A F M+
Sbjct: 312 YTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRML 371
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+G P++ YN ++ GFC A + D A M++ M+ G PN + YNTLV + GK+
Sbjct: 372 EQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVE 431
Query: 273 EAHEVIRHMVEKGK 286
E++ MV +G+
Sbjct: 432 AIGELLHTMVSRGR 445
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL---- 96
F+P K ++ A++ L + K ++Q M+ +G APD++T+ +++ L KL
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296
Query: 97 -----------------------------DQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
D+ RLL +M R G P+ TY LG
Sbjct: 297 SVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGD 356
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ + A M E G +P ++ + L+DG +A LD + M G P++V
Sbjct: 357 WKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNIVT 416
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y ++ + G++E +L M+++G+ P+V T+++++ G M G+ D A + +
Sbjct: 417 YNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNLAM 476
Query: 248 SRG 250
S+G
Sbjct: 477 SQG 479
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
F +P YN L L+ + KL+E ++ +M + PD+ T+NI++ A + +L
Sbjct: 158 FAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRP 217
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
+L++M G PD T+ L+ + AL + M E G + + + L++
Sbjct: 218 AILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVN 277
Query: 159 GLSRAGNL-DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQL 217
GL + G + +A ++ ++E +G PD V + ++ G +++ ++ D M+ KG
Sbjct: 278 GLCKEGRIEEALRFIYEE---EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFE 334
Query: 218 PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEV 277
+V+TYNS+I G C G+ DEA ++ M SR C PN + YNTL+ L + A E+
Sbjct: 335 LDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATEL 394
Query: 278 IRHMVEKG 285
R + KG
Sbjct: 395 ARVLTSKG 402
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 138/285 (48%), Gaps = 2/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ + P TFNILI + R + + RP + ++ ++ +
Sbjct: 190 MVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEAD 249
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + M + G ++ N+++ + G++++ R + E GF PD T+N
Sbjct: 250 VEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNA 307
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L + L +++ M E GF+ V + +L+ GL + G +D M ++
Sbjct: 308 LVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD 367
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+ V Y +I + +E A +L + +KG LP+V T+NS+I+G C+ + A
Sbjct: 368 CEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAM 427
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM+ +GC+P+ Y+ L+ +L + +L EA +++ M G
Sbjct: 428 ELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG 472
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 2/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+E+G T+ + N+L+ + G + + RFI + F P + ++NA+++ L
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEAL-RFIYEE-EGFCPDQVTFNALVNGLCRTGH 317
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + M ++G+ D+ TYN ++ +LG++D+ +L M P+ TYN
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K + AA L + G P V F +L+ GL N + F+EM KG
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKG 437
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD Y+++I S + L++A L M G NV YN++I G C + +A
Sbjct: 438 CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAE 497
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +ME G + + + YNTL++ L + ++ EA +++ M+ +G
Sbjct: 498 DIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEG 542
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 5/281 (1%)
Query: 7 PTTARTFNILICT-CGEVGL-ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
P T T+N LI T C E + A + R + SK P ++N+++ L ++
Sbjct: 370 PNTV-TYNTLIGTLCKENHVEAATELARVLTSK--GVLPDVCTFNSLIQGLCLTSNREIA 426
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
++++M ++G PD TY+I++ + +L + LL EM SG + + YN L+
Sbjct: 427 MELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDG 486
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K ++ A ++ + M+ +G S + + TL++GL ++ ++ D+M +G PD
Sbjct: 487 LCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPD 546
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
YT M+ + G++++A D+ M G P++ TY ++I G C AG+ D A +++
Sbjct: 547 KFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLR 606
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ +G YN ++ L + EA + R M+EKG
Sbjct: 607 SVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKG 647
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 7/278 (2%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
TFN LI +E F + K P + +Y+ ++ +L R+ K + ++M
Sbjct: 409 TFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEM 468
Query: 72 SDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
G A +++ YN + +C R+G + + D+M G S TYN L++ L K
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAED---IFDQMEMLGVSRSSVTYNTLINGLCKS 525
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A L++ M G P +TT++ + G++ M GC PD+V Y
Sbjct: 526 KRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTY 585
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+I AG ++ A L + KG + YN +I+ C + EA + +EM
Sbjct: 586 GTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMME 645
Query: 249 RGCNPNFLVYNTLVSNLRN-AGKLAEAHEVIRHMVEKG 285
+G P+ + Y + L N G + EA + M+EKG
Sbjct: 646 KGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKG 683
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 95/221 (42%), Gaps = 38/221 (17%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN ++ L + E ++ QM G + +TYN ++ + ++++ +L+D+M
Sbjct: 480 YNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMI 539
Query: 108 RSGFSPDFHTYNILL-HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G PD TY +L + +GD AA +++ +M G +P ++ + TL+ GL +AG +
Sbjct: 540 MEGLKPDKFTYTTMLKYFCQQGDIKRAA-DIVQNMTLNGCEPDIVTYGTLIGGLCKAGRV 598
Query: 167 DA---------------------------CKY--------FFDEMANKGCMPDVVCYTVM 191
D CK F EM KG PDV+ Y ++
Sbjct: 599 DVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIV 658
Query: 192 ITSYI-AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
G +++A D M+ KG LP ++ + G C
Sbjct: 659 FRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 84/214 (39%), Gaps = 5/214 (2%)
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L +W Q Y+ ++ ++ R G D LL +M S D T+ I L
Sbjct: 78 LFQWASAQ---PNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFL 134
Query: 123 HVLGKGDKPLAALNLLNHMKEVGF--DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
A +N L + E F P + + L +A L + +M
Sbjct: 135 ETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADA 194
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PDV + ++I + A +L A + + M G P+ T+ ++++GF + A
Sbjct: 195 VPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGAL 254
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
+ + M GC + N LV+ L G++ EA
Sbjct: 255 RIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA 288
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%)
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
PD Y V ++ + A +L+ + L M+ P+V T+N +IR C A + A M
Sbjct: 162 PDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILM 221
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+++M + G P+ + TL+ + A + MVE G + VS
Sbjct: 222 LEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVS 271
>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 373
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 3/222 (1%)
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
E VY++M++ +PD + YN ++ +R G++ L + MGR S + ++NI++
Sbjct: 10 ERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGRED-SQNVVSFNIMMRG 68
Query: 125 L-GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L G GD A+++ M + GF + L+DG + G ++ KG +
Sbjct: 69 LFGNGDVD-KAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVL 127
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D Y+ MI +L++A + +GMI G PN YN++I GF KFD+A +
Sbjct: 128 DAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVF 187
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+EM S C+P + YNTL++ L + AEA+++++ M+EKG
Sbjct: 188 REMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKG 229
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C G++ A +V + +SK+ P YNA+L+ + K +++ M E +
Sbjct: 1 CESGDIDGAERVYKEMAESKV---SPDAVVYNAMLNGFFRAGRIKDCIELWELMGRED-S 56
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
+++++NI+M + G +D+ + + M +SGF D TY IL+ K +L +
Sbjct: 57 QNVVSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRV 116
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L +E G ++ +++GL + LD + M G P+ Y +I ++
Sbjct: 117 LGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVG 176
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
+ + A +F M + P V TYN++I G C +F EA ++KEM +G P +
Sbjct: 177 VSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVIT 236
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
Y+ L+ L K+ A ++ ++ G
Sbjct: 237 YSLLMKGLCQGHKVEMALQLWNQVISNG 264
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 133/279 (47%), Gaps = 10/279 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M ++GF + T+ IL+ C G + + +V+ + K F +Y+A+++ L
Sbjct: 85 MTQSGFVEDSTTYGILVDGFCKNGYINKSLRVL-GIAEEKGGVLDAF--AYSAMINGL-- 139
Query: 58 IRQYKLIEWV--YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ KL E V M G P+ YN ++ + K D R+ EMG + SP
Sbjct: 140 CKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTV 199
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN L++ L KG++ A +L+ M E G+ P V+ ++ LM GL + ++ +++
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQ 259
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ + G PDV ++I + G+ + A L+ M PN+ T+N+++ GF G
Sbjct: 260 VISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGD 319
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
A + + G P+ + YN + L + +++ A
Sbjct: 320 IRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFA 358
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 102/220 (46%)
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
++G D Y+ ++ + KLD+ +L+ M ++G +P+ H YN L++ K
Sbjct: 122 EKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFD 181
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A+ + M P+V+ + TL++GL + EM KG P V+ Y++++
Sbjct: 182 DAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLM 241
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
++E A L++ +I+ G P+V N +I G C GK A + +M C
Sbjct: 242 KGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCA 301
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN + +NTL+ G + A + ++ G +VS
Sbjct: 302 PNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVS 341
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 100/212 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P + YN +++ +G+ ++ V+++M +P ++TYN ++ + + + + L
Sbjct: 162 PNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDL 221
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ EM G+ P TY++L+ L +G K AL L N + G P V L+ GL
Sbjct: 222 VKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCS 281
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + +M C P++V + ++ + G++ A ++ ++ G P++ +
Sbjct: 282 VGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVS 341
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
YN ++G C + A +++ ++ P+
Sbjct: 342 YNITLKGLCSCSRISFAILFLQDALAKKIAPS 373
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 6/178 (3%)
Query: 9 TARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T T+N LI C A +V+ ++ ++P +Y+ ++ L + ++
Sbjct: 198 TVVTYNTLINGLCKGERFAEAYDLVKEMLEK---GWKPCVITYSLLMKGLCQGHKVEMAL 254
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++ Q+ G PD+ NI++ +GK L +M R +P+ T+N L+
Sbjct: 255 QLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGF 314
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K AL + + G P ++ + + GL + F + K P
Sbjct: 315 YKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAP 372
>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 794
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ +M +G PD +TY V+ + G+++ R ++M SP YN L+H L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK A L+ M + G + F +++D + G + + FD M G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I Y AG++++A L M++ G P+ TYN++I G+C + ++A + +EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
ES G +P+ + YN ++ L + A A E+ + E G + L
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG RT+N ++ G ++ + K P +YN+++ L +
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G P+I TY ++ G L + H LLD M R+G P+ + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+ K K A+ + + M++ G +P + + T++ L ++G + DA +YF
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 173 -----------------FD----------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
FD EM ++G D + + +I S+ G + +++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G P++ TY+++I G+C+AGK DEA ++ M S G P+ + YNTL++
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ +A + R M G
Sbjct: 560 CKISRMEDALVLFREMESSG 579
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 4/201 (1%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+CA R D +L M + G P+ +YNILL L ++ AL LL M + G
Sbjct: 136 LCADKRTS--DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGG 193
Query: 147 D--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
D P V+ +TT+++G + G+LD + EM ++G +P+VV Y+ +I + A ++KA
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKA 253
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++ M+ G +PN TYNS++ G+C +G+ EA +K+M S G P+ + YN+L+
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 314 LCKNGRCTEARKMFDSMTKRG 334
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY +++ Y +M D G P+++TY+ ++ A + +D+ +
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M ++G P+ TYN ++H +P A+ L M G +P V+ + +LMD L +
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + FD M +G P++ Y ++ Y G L + L D M+ G PN +
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++ +I + GK D+A + +M +G NP+ + Y T++ L +G++ +A M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 283 EK 284
++
Sbjct: 437 DE 438
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++I+ AL + V M G P+ TYN ++ G+ +
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TYN L+ L K + A + + M + G P + + TL+ G +
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G P+ ++++I +Y G++++A +F M +G P+ T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G+ ++A ++M +P +VYN+L+ +L K +A E+I M+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 283 EKG 285
++G
Sbjct: 472 DRG 474
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G V A + E+ I +L P YN+++H+L ++ + + +M D G
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERL---SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
D + +N ++ + + G++ + +L D M R G PD TY+ L+ K A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL M VG P + + TL++G + ++ F EM + G PD++ Y +++
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A++L+ G+ G + TYN ++ G C DEA M + +
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N ++ L G+ EA ++ + G
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 7/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ GF A F L+ C A +V R + P SYN +L L
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCD 174
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + Q M D+G PD+++Y V+ ++ G LD+ + EM G P+
Sbjct: 175 ENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV 234
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ ++ L K A+ +L M + G P+ + +++ G +G F +
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PDVV Y ++ G +A+ +FD M +G P + TY ++++G+ G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E ++ M G +PN V++ L+ GK+ +A V M ++G
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCL 526
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +TYN ++ ++ +++ L EM SG SPD T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +P+V TY+ M G +
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + ME GC N + N++V L G + A + + EK
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 143/289 (49%), Gaps = 17/289 (5%)
Query: 9 TARTFNILI-CTCGEV---------GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
T +FN+L+ C C + LA +VV R I + + P K +Y+ ++ AL
Sbjct: 270 TLLSFNLLLKCVCSSLVPRNHQLYLELALRVVHRSIPA--WKLVPDKFTYSTVVSALADA 327
Query: 59 -RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + V++ + D A + +N V+ A R G + +L M G +P T
Sbjct: 328 GRVDDAVALVHEMVVDGVVAAE--AFNPVLGAMLRTGDVTGAAKLFSFMQLKGCAPSAAT 385
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYFFDEM 176
YN+LLH L + AA+ ++ M+ P V+ + ++DGL R G L DACK +EM
Sbjct: 386 YNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDACK-VIEEM 444
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+KG +P+ ++ +IT + GE+++A ++D M+ G PNV Y++MI G GK
Sbjct: 445 RSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGLARCGKM 504
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + +EM C PN + Y+++V G ++A M+ G
Sbjct: 505 TEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIG 553
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 36 SKLFNF------RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
+KLF+F P +YN +LH LL + K V ++M P ++TY V+
Sbjct: 368 AKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDG 427
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPLAALNLLNHMKEVGF 146
R G+L+ ++++EM G P+ ++ ++ LG+ D+ A + + M G
Sbjct: 428 LVRCGRLEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDR---ASRVWDTMVAAGI 484
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
P+V+ ++ ++DGL+R G + + F EM C+P+++ Y+ M+ Y G+ +A
Sbjct: 485 KPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALS 544
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
++ M+ G PN TY+ +I G C G+ +A + K M RGC P+ + Y +++
Sbjct: 545 FWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFC 604
Query: 267 NAGKLAEAHEVIRHMVEKG 285
+G + + M+ +G
Sbjct: 605 VSGMVDAGLRLFYDMLARG 623
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 136/308 (44%), Gaps = 42/308 (13%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G +A T+N+L+ CG A V+ R ++++ P +Y A++ L+ +
Sbjct: 378 GCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVV---PGVMTYGAVVDGLVRCGRL 434
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V ++M +G P+ ++ V+ +LG++D+ R+ D M +G P+ Y+ +
Sbjct: 435 EDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAM 494
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L + K A L M E P+++ +++++ G + G+ F+++M GC
Sbjct: 495 IDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGC 554
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ V Y+V+I G + A ++ M+ +G +P+ Y SMI+GFC++G D
Sbjct: 555 TPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLR 614
Query: 242 MMKEMESRG------------------------------------CNPNFLVYNTLVSNL 265
+ +M +RG C+P+ + NT + +
Sbjct: 615 LFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREI 674
Query: 266 RNAGKLAE 273
K E
Sbjct: 675 EVGQKGQE 682
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 120/236 (50%), Gaps = 7/236 (2%)
Query: 18 CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
C GEV A +V + + + + +P Y+A++ L + E ++++M +
Sbjct: 464 CKLGEVDRASRVWDTMVAAGI---KPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCV 520
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+I+TY+ ++ +++G Q ++M R G +P+ TY++L++ L + A+ +
Sbjct: 521 PNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMV 580
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA-CKYFFDEMANKGCMPDVVCYTVMITSYI 196
HM G P + +T+++ G +G +DA + F+D +A PDV+CY V++ +
Sbjct: 581 WKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLL 640
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A +L +A DL + M+ + P+ T N+ +R + K E ++ + R CN
Sbjct: 641 RAKDLPRAMDLLNQMLDQACDPDTVTCNTFLREIEVGQKGQE---FLEGLVVRLCN 693
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 4/257 (1%)
Query: 8 TTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
+T R F+ L T + R + F++ K + F P S NA + +LLG + +
Sbjct: 166 STPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Y++M +P+ T N+VM R GKLD+ LL +M R GF +YN L + G
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL--IAGH 283
Query: 128 GDKPL--AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+K L +AL L N M + G P+V+ F TL+ G RA L F EM P+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I Y G+ E A ++ M+ G ++ TYN++I G C K +A +KE
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 246 MESRGCNPNFLVYNTLV 262
++ PN ++ L+
Sbjct: 404 LDKENLVPNSSTFSALI 420
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 122/264 (46%), Gaps = 7/264 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNS---YNAILHALLGIRQYKLIEWVYQQMSDEGYA 77
G V L KV + L+++R ++ ++++ +++++ + QM D G+
Sbjct: 145 GGVDLPAKVFDAL----LYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL 200
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P + + N M + G++D R EM R SP+ +T N+++ + K + L
Sbjct: 201 PTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIEL 260
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L M+ +GF + + + TL+ G G L + + M G P+VV + +I +
Sbjct: 261 LQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
A +L++A +F M PN TYN++I G+ G + A ++M G + L
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHM 281
YN L+ L K +A + ++ +
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKEL 404
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 105/248 (42%), Gaps = 6/248 (2%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
GF T ++N LI C G + A K+ KS L +P ++N ++H +
Sbjct: 268 GFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL---QPNVVTFNTLIHGFCRAMKL 324
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V+ +M AP+ +TYN ++ + G + R ++M +G D TYN L
Sbjct: 325 QEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNAL 384
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ L K K A + + + P+ F+ L+ G N D + M GC
Sbjct: 385 IFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGC 444
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P+ + ++++++ + + A + M+ + + T + + G GK
Sbjct: 445 HPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKK 504
Query: 242 MMKEMESR 249
+++EME +
Sbjct: 505 LLQEMEGK 512
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 22/205 (10%)
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM--------------------KEVGFD 147
R+ S T+ I+LH L K K +A ++L + +E
Sbjct: 108 RNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDST 167
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
P V F +L + F +M + G +P V ++S + G ++ A
Sbjct: 168 PRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRF 225
Query: 208 FDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
+ M PN +T N ++ G+C +GK D+ ++++ME G + YNTL++
Sbjct: 226 YREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCE 285
Query: 268 AGKLAEAHEVIRHMVEKGKYIHLVS 292
G L+ A ++ M + G ++V+
Sbjct: 286 KGLLSSALKLKNMMGKSGLQPNVVT 310
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 145/302 (48%), Gaps = 7/302 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G P T+N LI + R+ + F + K +P N+YN++L
Sbjct: 393 MADSGLPDVF-TYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGC 451
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+Y +M EG+ P+++TY +M D + LLDEM ++G S + +TYN+
Sbjct: 452 MDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNV 511
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ + D+ +L GF P+++ + ++++G +AG + + + +M KG
Sbjct: 512 LINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKG 571
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+++ YT I Y G + A + + + +G P++ YN++I GFC G A
Sbjct: 572 LPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHAL 631
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKF 294
++ + G PN +VYN+L++ +N + E + M++ G Y L+ F
Sbjct: 632 QLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGF 691
Query: 295 KR 296
+
Sbjct: 692 SK 693
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 12/302 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +NG T+N+LI C V +++ F+ F P +YN+I++ +
Sbjct: 497 MKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSE---GFIPTMMTYNSIINGFVK 553
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
VYQQM ++G P+I+TY + R G D ++L+++ R G PD
Sbjct: 554 AGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVA 613
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L++ + AL LL + + G P+ + + +L+ G + F++ M
Sbjct: 614 YNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMI 673
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + D YT +I + G + A +L+ M+ KG +P+ FT+ ++ G C +G D
Sbjct: 674 KGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDID 733
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLV 291
A +++EM PN +YN L++ KL EA + M+ G Y LV
Sbjct: 734 GAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793
Query: 292 SK 293
SK
Sbjct: 794 SK 795
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 99/219 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
++ +M GY D ++ +M A + G + RL DEM + PD Y + + L
Sbjct: 179 LFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALC 238
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AL +L MKEVGFD + T++D L + G ++ DEM + G DV+
Sbjct: 239 KLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVI 298
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
T ++ Y E+ A +LF + G +P Y +IRG G +A + ++M
Sbjct: 299 VATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM 358
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G P+ + ++ L N + +A + M + G
Sbjct: 359 TGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG 397
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 122/285 (42%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G ++ L+ A+ + F++ + +R ++A++ A L
Sbjct: 148 MVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGM 207
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ ++ +M PD Y + + A +LG + R+L EM GF TY
Sbjct: 208 HEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRT 267
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ VL K + AL + + M++ G V+ TTLM G + F E G
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDG 327
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+P V Y V+I G +KA +L M +G LP+ F + +++G ++ +A
Sbjct: 328 IVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAV 387
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ +EM G P+ YN L+ A KL EA + M + G
Sbjct: 388 CLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAG 431
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%)
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ D P AA + HM G P + T L+ +R + F EM +G D
Sbjct: 134 RSDLPSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAW 193
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
+ ++++ + G E A LFD M P+ Y I C G A M++EM
Sbjct: 194 MFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREM 253
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ G + Y T+V L G++ EA V M + GK + ++
Sbjct: 254 KEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVI 298
>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g02860-like [Brachypodium distachyon]
Length = 791
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 112/232 (48%), Gaps = 1/232 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG-KLDQFHR 101
P ++Y A++ AL +++ V+++M G P ++TYN+V+ ++ +
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L+D M + G D +TYN L+ + A + + M+ GF+P + +L+D
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+A D EM GC P VV Y +I+SY+ G LE+A L + M KG P+V
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
TY +++ G AGK D A EM GC PN YN L+ GK E
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPE 405
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 130/281 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G P T+N LI C L ++ + F + + F P K + N++L R+
Sbjct: 238 MRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARR 297
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y V ++M G P ++TYN ++ + + G L++ +L +EM G PD TY
Sbjct: 298 YDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTT 357
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L + K AA+ N M G P++ + L+ G FDE+ + G
Sbjct: 358 LVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAG 417
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+PDVV + ++ + G + +F M G +P TY S+I + G FD+A
Sbjct: 418 FVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAM 477
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ K M G +P+ YN ++S L G+ +A ++ M
Sbjct: 478 EIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEM 518
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 1/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPF-KNSYNAILHALLGIR 59
M+ NG T+N+++ ++ + K V + S + P + +YN ++
Sbjct: 202 MVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRA 261
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
YK V+ +M G+ PD +T N ++ + + D+ +L EM + G P TYN
Sbjct: 262 LYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQGGCPPSVVTYN 321
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K A L M+ G +P V+ +TTL+ GL RAG +DA ++EM
Sbjct: 322 SLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLRN 381
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P++ Y +I + G+ + +FD + + G +P+V T+N+++ F G E
Sbjct: 382 GCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEV 441
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KEM+ G P Y +L+S+ G +A E+ + M+E G
Sbjct: 442 SGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 487
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 136/287 (47%), Gaps = 8/287 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MIE G T+N ++ G + + F + + + RP + SY+++LHA ++
Sbjct: 483 MIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKK 542
Query: 61 YKLIEWVYQQMSDEGYAPDILTYN----IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + +S++ YA I ++N ++ ++ L + E+ R S D +
Sbjct: 543 LDKM----KSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDIN 598
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
N ++ + GK +L+ MKE + S + +LM SR G+ + C+ E+
Sbjct: 599 VLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEI 658
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
+ PD Y MI +Y G++++A LF M G +P++ TYN ++ + F
Sbjct: 659 KSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMF 718
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+EA +++ M + GC PN YNT++ + G++A+ I ++ E
Sbjct: 719 EEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRIADGKSFISNLPE 765
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 122/276 (44%), Gaps = 6/276 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G P + T+N LI + + GL + + + ++ P +Y ++ L +
Sbjct: 308 MEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGK 367
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y +M G P++ TYN ++ GK + + DE+ +GF PD T+N
Sbjct: 368 IDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNT 427
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
LL V G+ + MK+ G+ P + +L+ SR G D + M G
Sbjct: 428 LLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAG 487
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+ Y ++++ G E+A+ LF M P+ +Y+S++ + A K D+
Sbjct: 488 IHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMK 547
Query: 241 TMMKEMESR------GCNPNFLVYNTLVSNLRNAGK 270
++ +++ + G ++ N+ V+NL + K
Sbjct: 548 SLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEK 583
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 132/320 (41%), Gaps = 43/320 (13%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+N L+ G+ GL +V F + K + P +++Y +++ + +
Sbjct: 417 GFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQA 476
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+Y++M + G PDI TYN V+ A R G+ +Q +L EM PD +Y+ LLH
Sbjct: 477 MEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHA 536
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL----SRAGNLDACKYFFDEMANKG 180
K L+ + + E + + L+ L S+ NL + F E+ +
Sbjct: 537 YANAKK----LDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRR 592
Query: 181 CMPDVVCYTVMIT-----------------------------------SYIAAGELEKAQ 205
C D+ MI+ Y G+ EK +
Sbjct: 593 CSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCE 652
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++ + + P+ ++YN+MI + G+ EA + EM+ G P+ + YN V +
Sbjct: 653 NILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSY 712
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
EA +++R+MV G
Sbjct: 713 VANSMFEEAIDLVRYMVTHG 732
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 12/171 (7%)
Query: 121 LLHVLGKGDKPLAALNLLN-----HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+L L +P AL ++ H + V P VL T + L+RAG L D
Sbjct: 113 VLSALASRGRPGVALAAIHAARDLHGERVLHHPRVL--PTAIRVLARAGRLADASALLDA 170
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC-MAG 234
+ PD YT +I++ A A +F M+ G P + TYN ++ + +A
Sbjct: 171 APD----PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAV 226
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ E ++ M G + YNTL+S R EA +V M G
Sbjct: 227 PWKEVLALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAG 277
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 141/283 (49%), Gaps = 4/283 (1%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
GF T+ LI G + +E F +++ + +P YN+++ L RQ ++
Sbjct: 345 GFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL--CRQGLIL 402
Query: 65 E--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
V +M +EG PDI TYNI++ ++G + ++++ G+ PD T+N L+
Sbjct: 403 HALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLI 462
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
K K +AL L+ M G P V+ + ++++GL +AG F+EM KGC
Sbjct: 463 DGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCR 522
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P+ + Y ++I ++ +LE+A + M G +P+ ++N++I GFC G D A +
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL 582
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++++ +G + +N L+ + + A ++ M+ KG
Sbjct: 583 FQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 625
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 134/287 (46%), Gaps = 12/287 (4%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L +C +V A + + R + P +YN I+ G + +++
Sbjct: 282 TYNTLMRGLCKDSKVQEAAQYLGRMMNQGCI---PDDFTYNTIID---GYCKSGMLQEAT 335
Query: 69 QQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ + D +G+ PD +TY ++ G +++ L +E PD YN L+ L
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGL 395
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ L AL ++N M E G P + + +++GL + GN+ ++ KG +PDV
Sbjct: 396 CRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDV 455
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ +I Y +L+ A L + M T G P+V TYNS++ G C AGK E +E
Sbjct: 456 FTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEE 515
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M +GC PN + YN L+ N +L EA VI M + G VS
Sbjct: 516 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVS 562
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 138/291 (47%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVV-ERFIKSKLFNFRPFKNSYNAILHALL 56
M+E G T+NI+I C G + A V+ + +K L + F + L
Sbjct: 411 MVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLK 470
Query: 57 GIRQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+L+E W Y G APD++TYN V+ + GK + + +EM G P+
Sbjct: 471 LDSALQLVERMWTY------GIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 524
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYNIL+ K ++ A ++ M + G P + F TL+ G R G+LD F
Sbjct: 525 AITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQ 584
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ KG + ++I +Y + ++ A+ +F MI+KG P+++TY ++ G C A
Sbjct: 585 KLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAA 644
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A + EM S+G P+ + +++ L +++EA +I MV G
Sbjct: 645 NVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMG 695
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 123/260 (47%), Gaps = 4/260 (1%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
AR + + + +F P ++N +LHAL + ++ G + + T NI
Sbjct: 195 ARHLFDEMLGRDVF---PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNI 251
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
+ G+L++ L++ MG + +PD TYN L+ L K K A L M G
Sbjct: 252 WIRGLCEDGRLEEAVALVERMG-AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQG 310
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P + T++DG ++G L + KG +PD V Y +I A G++E+A
Sbjct: 311 CIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERAL 370
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+LF+ K P++ YNS+++G C G A +M EM GC+P+ YN +++ L
Sbjct: 371 ELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGL 430
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
G +++A V+ + KG
Sbjct: 431 CKMGNISDAAVVMNDAIVKG 450
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 132/335 (39%), Gaps = 71/335 (21%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G R V+ F + LF P +YNAI+ AL+ + VY +M G APD
Sbjct: 82 ARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDA 141
Query: 81 LTYNI-----------------------------------VMCAKYRLGKLDQFHRLLDE 105
T+ + V+ Y G L DE
Sbjct: 142 RTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDE 201
Query: 106 M-GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD----------------- 147
M GR F PD T+N +LH L + + + LL + + G
Sbjct: 202 MLGRDVF-PDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDG 260
Query: 148 -----------------PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
P V+ + TLM GL + + + M N+GC+PD Y
Sbjct: 261 RLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNT 320
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I Y +G L++A +L + KG +P+ TY S+I G C G + A + E +++
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +VYN+LV L G + A +V+ MVE+G
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 35/244 (14%)
Query: 77 APDILTYNIVM-----------CAKY------------------------RLGKLDQFHR 101
APD++TYN +M A+Y + G L +
Sbjct: 277 APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATE 336
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
LL + GF PD TY L++ L AL L N + P ++ + +L+ GL
Sbjct: 337 LLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLC 396
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R G + +EM +GC PD+ Y ++I G + A + + I KG LP+VF
Sbjct: 397 RQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVF 456
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
T+N++I G+C K D A +++ M + G P+ + YN++++ L AGK E +E M
Sbjct: 457 TFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEM 516
Query: 282 VEKG 285
+ KG
Sbjct: 517 ILKG 520
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 93/258 (36%), Gaps = 41/258 (15%)
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF--HTYNILLHVL 125
+ + S E A I Y ++ G+LD L RS +PD Y +
Sbjct: 23 HAEPSSELTASTIPAYRALIRELVSAGRLDDVDAALAS-ARSHLAPDSLQPLYVASIQAY 81
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ + AA++ M P+ + +MD L A D + M G PD
Sbjct: 82 ARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDA 141
Query: 186 VCYTVMITSYI-----------------------------------AAGELEKAQDLFDG 210
+TV + S+ A G A+ LFD
Sbjct: 142 RTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDE 201
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M+ + P+V T+N+++ C G E+ ++ ++ RG + N N + L G+
Sbjct: 202 MLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261
Query: 271 LAEAHEVIRHMVEKGKYI 288
L EA ++ M G Y+
Sbjct: 262 LEEAVALVERM---GAYV 276
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 142/289 (49%), Gaps = 6/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G P T+N +I C V A+ ++ + + + + +P +YN ++H
Sbjct: 237 MTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGV---QPDNVTYNTLIHGYST 293
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ Q+K ++++M+ G P+ +T + + + G++++ D M G + +
Sbjct: 294 LGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIIS 353
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y+ LLH + NL N M G P+ F L++G ++ G + + F++M
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PDV+ Y +I ++ G ++ A D F+ MI KG PN Y +I+GFC G
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLV 473
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+A ++ E+ ++G P L + +L+++L G++ EA + ++ G+
Sbjct: 474 KAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGE 522
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 36 SKLFNFR------PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCA 89
S LFN P ++ +N +++ + ++++ M G PD+LTY V+ A
Sbjct: 371 SNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHA 430
Query: 90 KYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
R+G +D + M G P+F Y L+ + A L+ ++ G P
Sbjct: 431 FCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPC 490
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+L F +L++ L + G + + FD + G DV +T +I Y G++ +A + D
Sbjct: 491 ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHD 550
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
M++ G P++ TY +++ G C G+ D+ + +E+ +G P Y ++ L +AG
Sbjct: 551 AMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAG 610
Query: 270 KLAEAHEVIRHMVEKG 285
+ A A E+ + M+E G
Sbjct: 611 RTAAAKEMFQEMIESG 626
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 43 PFKNSYNAILHALL--GIRQYKLIEWVYQQMSDEGYAP-DILTYNIVMCAKYRLGKLDQF 99
P SY+ +L ++ G Q+ L + + + G P +++ Y+ V+ ++ GK+ +
Sbjct: 172 PDAISYSTVLKSVCDDGRSQWAL-DILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEA 230
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L EM + G P+ TYN ++H L K A +L M G P + + TL+ G
Sbjct: 231 CDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHG 290
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
S G F EM ++G +P+ V + + G +E+A++ FD M+ KG N
Sbjct: 291 YSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLN 350
Query: 220 VFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIR 279
+ +Y++++ G+ AG + + M G PN V+N LV+ G + EA +
Sbjct: 351 IISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFE 410
Query: 280 HMVEKG------KYIHLVSKFKR 296
M ++G Y+ ++ F R
Sbjct: 411 DMQKRGLNPDVLTYLAVIHAFCR 433
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 11/257 (4%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ---- 98
P +Y+ ++ R+ L + + +G D++ + ++ + D+
Sbjct: 101 PTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDV 160
Query: 99 -FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN-HMKEVGFDP-SVLHFTT 155
FHR M G PD +Y+ +L + + AL++L +K+ G P +V+ ++T
Sbjct: 161 LFHR----MPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYST 216
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++ GL + G + F EM +G P+VV Y +I + A ++KAQ + M+ G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P+ TYN++I G+ G++ +A M KEM SRG PN + +T V+ L G++ EA
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336
Query: 276 EVIRHMVEKGKYIHLVS 292
E M+ KG ++++S
Sbjct: 337 EFFDSMLAKGHKLNIIS 353
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 110/265 (41%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G FNIL+ + G+ R+ + F + P +Y A++HA +
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ M D+G P+ Y ++ G L + L+ E+ G P ++
Sbjct: 437 MDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFAS 496
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K + A + + + G V FT+L+DG G + D M + G
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
PD+V Y ++ G ++ LF ++ KG P FTY ++ G AG+ A
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNL 265
M +EM G Y+ L++ L
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGL 641
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 3/258 (1%)
Query: 17 ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY 76
+C G V A+++ + I++ + N + +++ I + V+ M G
Sbjct: 501 LCKEGRVFEAQRIFDMIIRT---GEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGI 557
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
PDI+TY ++ + G++D L E+ G P TY I+L L + AA
Sbjct: 558 EPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKE 617
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
+ M E G ++ ++ L+ GL R + F ++ D+V +MI+
Sbjct: 618 MFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMF 677
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFL 256
A E+A+ LF + G +P V TY M+ G +EA + M G +P
Sbjct: 678 KARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSH 737
Query: 257 VYNTLVSNLRNAGKLAEA 274
N +V L G++ +A
Sbjct: 738 FINVIVRTLLEKGEIVKA 755
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 119/288 (41%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G + LI CT G++ A ++V I++K P S+ ++++ L
Sbjct: 447 MIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYE-IRNK--GLGPCILSFASLINHLCK 503
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + ++ + G D+ + ++ +GK+ + R+ D M G PD T
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++ K + L L + G P+ + ++DGL AG A K F EM
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI 623
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G + Y++++T E+A +F + ++ N MI A + +
Sbjct: 624 ESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRRE 683
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + G P Y ++ NL G + EA V M++ G
Sbjct: 684 EAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 83/183 (45%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++++ +G P TY I++ + G+ + EM SG + TY+ILL L
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLC 642
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A+ + + + ++ ++ + +A + + F + + G +P V
Sbjct: 643 RNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQ 702
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT+M+ + I G +E+A+ +F M+ G P N ++R G+ +A M +
Sbjct: 703 TYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRV 762
Query: 247 ESR 249
+ +
Sbjct: 763 DGK 765
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
+P V Y+++I A L+ A F ++ +G +V +S++RG C A + DEA
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159
Query: 242 MM-KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ M GC P+ + Y+T++ ++ + G+ A +++R V++G
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQG 204
>gi|298705285|emb|CBJ48975.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 674
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 127/281 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +G T+N +I CG+ G V + P ++ + + A RQ
Sbjct: 206 MRRDGILPVTVTYNTVISACGKSGQWSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQ 265
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + QM ++ D Y + A +LGK + R LDEM +G + D T ++
Sbjct: 266 WHHVLRIMDQMQEDEVWVDKYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSV 325
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+ + A LL M + G P+V+ +T+LM L R G + D M +KG
Sbjct: 326 AISACADKGQWAQAEKLLEDMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKG 385
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MP+V Y+V I + A E +A L M +G PN +YN+ IR AG+ EA
Sbjct: 386 VMPNVRTYSVAIAACADAKEWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEAL 445
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+M EMESRG + + Y T V+ + A A E++ M
Sbjct: 446 DLMDEMESRGVKASVVTYGTAVAACQRAADWKMALELLAAM 486
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 133/292 (45%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G A ++ +I C +K V+ + P +YN ++ A Q
Sbjct: 171 MRQSGLAPNAVIYSTVISACERSDQWQKAVKLLRTMRRDGILPVTVTYNTVISACGKSGQ 230
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ L + +MSD G P +T+ M A R + R++D+M D + Y
Sbjct: 231 WSLAVSLLDEMSDMGCPPGPVTFASAMLACERARQWHHVLRIMDQMQEDEVWVDKYAYTT 290
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+H G+ K + L+ M G V+ + + + G + ++M + G
Sbjct: 291 AIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLEDMLDDG 350
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+V+ YT ++ G+ E+A + D M +KG +PNV TY+ I A ++ A
Sbjct: 351 LTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKEWRRAL 410
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++KEME G +PN + YNT + +AG+L+EA +++ M +G +V+
Sbjct: 411 ALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVT 462
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
K +Y +HA + ++ +M G A D++T ++ + A G+ Q +LL+
Sbjct: 285 KYAYTTAIHAAGQLGKWARCVRYLDEMDSNGVAKDVVTVSVAISACADKGQWAQAEKLLE 344
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+M G +P+ TY L+ VL +G + A+ +L+ M+ G P+V ++ + + A
Sbjct: 345 DMLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAK 404
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
EM +G P+ + Y I + AG+L +A DL D M ++G +V TY
Sbjct: 405 EWRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYG 464
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ + A + A ++ M PN +VY ++ AG+ ++A V +E+
Sbjct: 465 TAVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKAL-VDADQIEE 523
Query: 285 GKYIHLVSKFKRYKRC 300
I L +K + + C
Sbjct: 524 A--IQLFNKLQARRNC 537
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 107/260 (41%), Gaps = 11/260 (4%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G T+ L+ G + ++ + P +Y+ + A ++
Sbjct: 346 MLDDGLTPNVITYTSLMVVLRRGGQHERAIKILDLMRSKGVMPNVRTYSVAIAACADAKE 405
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ + ++M EG +P+ ++YN + A G+L + L+DEM G TY
Sbjct: 406 WRRALALLKEMEREGVSPNEISYNTAIRACGDAGQLSEALDLMDEMESRGVKASVVTYGT 465
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-----------DAC 169
+ + AL LL M+ +P+ + + ++ AG +A
Sbjct: 466 AVAACQRAADWKMALELLAAMRREQIEPNEIVYGGIIKACCAAGQASKALVDADQIEEAI 525
Query: 170 KYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRG 229
+ F A + C + YT ++ + ++A LF M + +P V Y S++R
Sbjct: 526 QLFNKLQARRNCSVTIHSYTPLVDALTRELRWQEAIMLFQEMEDRKIMPTVQCYTSVVRA 585
Query: 230 FCMAGKFDEACTMMKEMESR 249
+G++D A ++ +M +
Sbjct: 586 CERSGQYDVALRLLDDMRKK 605
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 142/287 (49%), Gaps = 4/287 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERFIKSKL-FNFRPFKNSYNAILHALLGIRQYKLIEWV 67
+ ++F ++ G+ L K +E F + F +P S+N++L+ ++ +
Sbjct: 106 SEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEF 165
Query: 68 YQQM---SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
Y + D P++L++N+++ + +LG +D L EM PD +TY L+
Sbjct: 166 YNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDG 225
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L K D+ A++LL+ M+ G PS F L++GL + G+ D M KGC+P+
Sbjct: 226 LCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPN 285
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V Y +I G+L+KA L D M++ +PN TY ++I G G+ + ++
Sbjct: 286 EVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLV 345
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
ME RG N VY+ LVS L GK EA + + ++KG ++ V
Sbjct: 346 LMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTV 392
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 9 TARTFNILICTCGEVGLARKVVERF---IKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
T ++FN ++ + G + +E + + +K N P S+N I+ ++ +
Sbjct: 142 TVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAI 201
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++++M PD TY +M ++ ++D+ LLDEM G P T+N+L++ L
Sbjct: 202 ELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGL 261
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K L+++M G P+ + + TL+ GL G LD D M + C+P+
Sbjct: 262 CKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNE 321
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V Y +I + G + M +G + N + Y+ ++ G GK +EA + KE
Sbjct: 322 VTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKE 381
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+GC N ++Y+ LV L K EA +++ M +KG
Sbjct: 382 SMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKG 421
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 9/285 (3%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVER-FIKSKLFNFRPFKNSYNAILHALLG 57
IE FP+ A TFN+LI C G+ K+V+ F+K + P + +YN ++H L
Sbjct: 244 IEGCFPSPA-TFNVLINGLCKKGDFTRVTKLVDNMFLKGCV----PNEVTYNTLIHGLCL 298
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + +M P+ +TY ++ + G+ R+L M G+ + +
Sbjct: 299 KGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYV 358
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y++L+ L K K A+ L + G + + ++ L+DGL R D EM
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMT 418
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+KGC P+ ++ ++ + G KA +++ M N Y+ +I G C GK
Sbjct: 419 DKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVM 478
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
EA + +M + GC P+ + Y++++ L +AG + EA ++ M+
Sbjct: 479 EAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML 523
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 116/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++N +++ L + + + M +G P+ +TYN ++ GKLD+ L
Sbjct: 249 PSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSL 308
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
LD M S P+ TY +++ L K + L +L M+E G+ + ++ L+ GL +
Sbjct: 309 LDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFK 368
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + F E +KGC + V Y+ ++ + ++A + M KG PN FT
Sbjct: 369 EGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFT 428
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++S+++GF G +A + K+M C N + Y+ L+ L GK+ EA V M+
Sbjct: 429 FSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKML 488
Query: 283 EKG 285
G
Sbjct: 489 ATG 491
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 47/297 (15%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW-- 66
T+N LI C G++ A +++R + SK P + +Y I++ L ++Q + ++
Sbjct: 288 TYNTLIHGLCLKGKLDKALSLLDRMVSSKCV---PNEVTYGTIINGL--VKQGRALDGAR 342
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V M + GY + Y++++ ++ GK ++ RL E G + Y+ L+ L
Sbjct: 343 VLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLC 402
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ KP A+ +L+ M + G P+ F++LM G GN + +M C + V
Sbjct: 403 RDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEV 462
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
CY+V+I G++ +A ++ M+ G P+V Y+SMI+G C AG +EA + EM
Sbjct: 463 CYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEM 522
Query: 247 E-------------------------------------SRGCNPNFLVYNTLVSNLR 266
RGC+P+ + N + LR
Sbjct: 523 LCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLR 579
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 2/153 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G A TF+ L+ EVG + K +E + N + Y+ ++H L +
Sbjct: 417 MTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGK 476
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM--GRSGFSPDFHTY 118
V+ +M G PD++ Y+ ++ G +++ +L +EM PD TY
Sbjct: 477 VMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITY 536
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
NIL + L K A++LLN M + G DP ++
Sbjct: 537 NILFNALCKQSSISRAVDLLNSMLDRGCDPDLV 569
>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ +M +G PD +TY V+ + G+++ R ++M SP YN L+H L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK A L+ M + G + F +++D + G + + FD M G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I Y AG++++A L M++ G P+ TYN++I G+C + ++A + +EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
ES G +P+ + YN ++ L + A A E+ + E G + L
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 4/201 (1%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+CA R D +L M + G P+ +YNILL L ++ AL LL M + G
Sbjct: 136 LCADKRTS--DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGG 193
Query: 147 D--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
D P V+ +TT+++G + G+LD + EM ++G +P+VV Y+ +I + A ++KA
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKA 253
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++ M+ G +PN TYNS++ G+C +G+ EA +K+M S G P+ + YN+L+
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 314 LCKNGRCTEARKMFDSMTKRG 334
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG RT+N ++ G ++ + K P +YN+++ L +
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G P+I TY ++ G L + H LLD M R+G P+ + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+ K K A+ + + M++ G +P + + T++ L ++G + DA +YF
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 173 -----------------FD----------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
FD EM ++G D + + +I S+ G + +++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G P++ TY+++I G+C+AGK DEA ++ M S G P+ + YNTL++
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ +A + R M G
Sbjct: 560 CKISRMEDALVLFREMESSG 579
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY +++ Y +M D G P+++TY+ ++ A + +D+ +
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEV 256
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M ++G P+ TYN ++H +P A+ L M G +P V+ + +LMD L +
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + FD M +G P++ Y ++ Y G L + L D M+ G PN +
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++ +I + GK D+A + +M +G NP+ + Y T++ L +G++ +A M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 283 EK 284
++
Sbjct: 437 DE 438
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++I+ AL + V M G P+ TYN ++ G+ +
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TYN L+ L K + A + + M + G P + + TL+ G +
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G P+ ++++I +Y G++++A +F M +G P+ T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G+ ++A ++M +P +VYN+L+ +L K +A E+I M+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 283 EKG 285
++G
Sbjct: 472 DRG 474
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G V A + E+ I +L P YN+++H+L ++ + + +M D G
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERL---SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
D + +N ++ + + G++ + +L D M R G PD TY+ L+ K A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL M VG P + + TL++G + ++ F EM + G PD++ Y +++
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A++L+ G+ G + TYN ++ G C DEA M + +
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N ++ L G+ EA ++ + G
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
SYN +L L + + + Q M D+G PD+++Y V+ ++ G LD+ +
Sbjct: 164 SYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYH 223
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM G P+ TY+ ++ L K A+ +L M + G P+ + +++ G +G
Sbjct: 224 EMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSG 283
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
F +M + G PDVV Y ++ G +A+ +FD M +G P + TY
Sbjct: 284 QPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYG 343
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
++++G+ G E ++ M G +PN V++ L+ GK+ +A V M ++
Sbjct: 344 TLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403
Query: 285 G 285
G
Sbjct: 404 G 404
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCL 526
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +TYN ++ ++ +++ L EM SG SPD T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +P+V TY+ M G +
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + ME GC N + N++V L G + A + + EK
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 130/265 (49%), Gaps = 4/265 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLGI 58
M+ +G T+N LI + G + + F + + +P + +Y ++ HA G
Sbjct: 390 MVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGF 449
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ +YQ+M G +PD TY++++ + G L H+L EM G +P+ TY
Sbjct: 450 LDIAMD--MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
NI++ + K +AL L M+ GF+P + ++ +M+ L G L+ + F EM
Sbjct: 508 NIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K +PD Y +++ + AG +EKA + M+ G LPNV T NS++ F K E
Sbjct: 568 KNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAE 627
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVS 263
A +++ M + G P+ Y L+S
Sbjct: 628 AYELLQNMLALGLRPSLQTYTLLLS 652
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
W+ +Q G+ D TY ++ R + ++LLDEM R G P+ TYN L+H
Sbjct: 353 WLKRQ---PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSY 409
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
G+ + A+N+ N M+E G P + + TL+D ++AG LD + M G PD
Sbjct: 410 GRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDT 469
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y+V+I AG L A LF M+ +G PN+ TYN M+ A + A + ++
Sbjct: 470 FTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRD 529
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
M++ G P+ + Y+ ++ L + G L EA V M +K
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQK 568
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILICTCG---EVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+ GF T+ ++ G + G K+++ ++ +P +YN ++H+
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRD---GCQPNTVTYNRLIHSYGRAN 413
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
V+ QM + G PD +TY ++ + G LD + M G SPD TY+
Sbjct: 414 YLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYS 473
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++++ LGK AA L M + G P+++ + +MD ++A N + + +M N
Sbjct: 474 VIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNA 533
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G PD V Y++++ G LE+A+ +F M K +P+ Y ++ + AG ++A
Sbjct: 534 GFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKA 593
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M G PN N+L+S K+AEA+E++++M+ G
Sbjct: 594 WQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALG 639
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%)
Query: 142 KEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGEL 201
++ GF +TT++ L RA A DEM GC P+ V Y +I SY A L
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
+A ++F+ M G P+ TY ++I AG D A M + M++ G +P+ Y+ +
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++ L AG L AH++ MV++G +LV+
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVT 506
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%)
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+A +F+ G D YT M+ + A + L D M+ G PN TYN +
Sbjct: 346 NALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRL 405
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I + A +EA + +M+ GC P+ + Y TL+ AG L A ++ + M G
Sbjct: 406 IHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI-- 58
M GF T++I++ G G + F + + N+ P + Y +L L G
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY-GLLVDLWGKAG 588
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
K +W YQ M G P++ T N ++ R+ K+ + + LL M G P TY
Sbjct: 589 NVEKAWQW-YQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Query: 119 NILLHVLGKGDKPL 132
+LL G L
Sbjct: 648 TLLLSCCTDGRSKL 661
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 2/282 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNSYNAILHALLGIRQYKL 63
G +++ F+ L+ E G ++ F +K N + PF N +L ++ + +
Sbjct: 157 GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPF-NGCKCLLERMIKMSSPMV 215
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
Y ++ D GY P++ T+N++M + GK+ + DE+ ++G P ++N L++
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K L M+E P V ++ L+DGL + L+ + F EM ++G +P
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+ V +T +I G ++ A +++ M TKG ++ YN++I G C G F EA +
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM RG P+ Y TL+ G L A E+ + MV++G
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEG 437
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 134/290 (46%), Gaps = 14/290 (4%)
Query: 3 ENGFPTTARTFNILI---CTCG--EVGLARKVVERFIKSKLFNFRPFKN--SYNAILHAL 55
+ G TA +FN LI C G E G K+V + FR F + +Y+A++ L
Sbjct: 260 KTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMV-------MEEFRVFPDVFTYSALIDGL 312
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
Q + ++++M D G P+ +T+ ++ + + G++D + +M G D
Sbjct: 313 CKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADL 372
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
YN L+ L KG A + M + G P +TTL+DG + G+L+ E
Sbjct: 373 VLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKE 432
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M +G D V +T +I+ G++ A+ M+ G P+ TY ++ GFC G
Sbjct: 433 MVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGD 492
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+S G P + YN L++ L G++ A ++ M+ G
Sbjct: 493 VKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLG 542
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 7/232 (3%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+YQQM +G D++ YN ++ + G + + + EM + G PD TY LL
Sbjct: 359 IYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSC 418
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K AL + M + G + FT ++ GL R G + + EM G PD
Sbjct: 419 KEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDG 478
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YT+++ + G+++ L M + G +P V TYN ++ G C G+ A ++ M
Sbjct: 479 TYTMVMDGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAM 538
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYK 298
+ G P+ + YN L+ GKL + V M LVS + Y+
Sbjct: 539 LNLGVVPDDITYNILLQGHCKHGKLGDFQNVKTEM-------GLVSDYASYR 583
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%)
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
F+ LL + K P+ AL + + G+ P+V F LM+ L + G + + FD
Sbjct: 197 FNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
E+ G P V + +I Y +G LE+ L M P+VFTY+++I G C
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKEC 316
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+ ++A + KEM RG PN + + TL++ G++ A E+ + M KG LV
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLV 373
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 9/273 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G TF LI C G V LA ++ ++ L + YN ++ L
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGL---KADLVLYNTLIDGLCK 384
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ +M+ G PD TY ++ + G L+ + EM + G D
Sbjct: 385 GGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVA 444
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ ++ L + K + A L M G P +T +MDG + G++ EM
Sbjct: 445 FTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQ 504
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G +P V+ Y V++ G+++ A L + M+ G +P+ TYN +++G C GK
Sbjct: 505 SDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLG 564
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
+ + EM G ++ Y +L+ L A K
Sbjct: 565 DFQNVKTEM---GLVSDYASYRSLLHELSKASK 594
>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
Length = 700
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++ G A T +IL+ C G+V A++V E + + L P YN +++ +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLV---PTTVIYNTLINGYCQV 382
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R + +++QM PD +TYN ++ +L + + L+ EM +SG P T+
Sbjct: 383 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 442
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G + +L+ M++ G V+ F +++ + G + D+M
Sbjct: 443 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 502
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K P+ Y +I +YI +G+ E+A L + M G ++ TYN +++G C + + DE
Sbjct: 503 KDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 562
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ + ++G P+ + YNT++S N G +A E+++ M + G
Sbjct: 563 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 609
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 135/290 (46%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E P A ++N++I G ++ F + P + +YN ++ + +
Sbjct: 187 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLE 246
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ QM +G P+++TYN+++ R G++D+ L+DEM PD TY+IL
Sbjct: 247 AGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILF 306
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + + L+L + G + L++GL + G + K F+ + + G +
Sbjct: 307 DGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLV 366
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P V Y +I Y +L A +F+ M ++ P+ TYN++I G C +A +
Sbjct: 367 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 426
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EME G +P+ +NTL+ AG+L + V+ M +KG ++S
Sbjct: 427 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 476
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 142/292 (48%), Gaps = 5/292 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +GF T++IL G ++ ++ F +S + + +L+ L +
Sbjct: 295 MLPDGF-----TYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGK 349
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V++ + G P + YN ++ ++ L + ++M PD TYN
Sbjct: 350 VAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNA 409
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K + A +L+ M++ G DPSV F TL+D AG L+ C +M KG
Sbjct: 410 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 469
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
DV+ + ++ ++ G++ +A + D MI K PN YNS+I + +G ++A
Sbjct: 470 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAL 529
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++M++ G + + + YN L+ L + ++ EA E+I + +G +VS
Sbjct: 530 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 581
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 121/245 (49%), Gaps = 2/245 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +S N +L +LL + ++ + + + G PD +N V+ A G LD +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 103 LDEMGRS--GFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
L MGRS PD +YN+++ L + K AL + + M ++G P+ + + T++DG
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G+L+A D+M + G P+VV Y V+++ G +++ + L D M + LP+
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
FTY+ + G G+ ++ E +G + L++ L GK+A+A +V
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEM 359
Query: 281 MVEKG 285
+V G
Sbjct: 360 LVHTG 364
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 124/274 (45%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI ++ + K + ++ + P ++N ++ A Q + V M
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G D++++ V+ A + GK+ + +LD+M +P+ YN ++ +
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L+ MK G S++ + L+ GL R+ +D + + N+G PDVV Y +
Sbjct: 526 EQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 585
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I++ G+ +KA +L M G P + T ++++ AG+ + + ++M +
Sbjct: 586 ISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNV 645
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +Y +V ++ + + M EKG
Sbjct: 646 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 148 PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDL 207
PS+ L++ L G + F + G PD + ++ + +AAG+L+ A +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179
Query: 208 FD--GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
G P+ F+YN +I G +GK +A + EM G PN + YNT++
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G L + M+ G ++V+
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVT 266
Score = 38.1 bits (87), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 44/111 (39%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
G ++N +I C G K +E + + RP + + ++ AL +
Sbjct: 573 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHD 632
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+E +YQQM + P Y I++ A R + L EM G + D
Sbjct: 633 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683
>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
Length = 1144
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 114/224 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ +M +G PD +TY V+ + G+++ R ++M SP YN L+H L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK A L+ M + G + F +++D + G + + FD M G PD++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDII 515
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I Y AG++++A L M++ G P+ TYN++I G+C + ++A + +EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
ES G +P+ + YN ++ L + A A E+ + E G + L
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 112/201 (55%), Gaps = 4/201 (1%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+CA R D +L M + G P+ +YNILL L ++ AL LL M + G
Sbjct: 136 LCADKRTS--DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGG 193
Query: 147 D--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
D P V+ +TT+++G + G+LD + EM ++G +P+VV Y+ +I + A ++KA
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKA 253
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++ M+ G +PN TYNS++ G+C +G+ EA +K+M S G P+ + YN+L+
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 314 LCKNGRCTEARKMFDSMTKRG 334
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 149/320 (46%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG RT+N ++ G ++ + K P +YN+++ L +
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G P+I TY ++ G L + H LLD M R+G P+ + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+ K K A+ + + M++ G +P + + T++ L ++G + DA +YF
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 173 -----------------FD----------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
FD EM ++G D + + +I S+ G + +++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G P++ TY+++I G+C+AGK DEA ++ M S G P+ + YNTL++
Sbjct: 500 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ +A + R M G
Sbjct: 560 CKISRMEDALVLFREMESSG 579
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
Y +M D G P+++TY+ ++ A + +D+ +L M ++G P+ TYN ++H
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+P A+ L M G +P V+ + +LMD L + G + FD M +G P++
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++ Y G L + L D M+ G PN + ++ +I + GK D+A + +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+G NP+ + Y T++ L +G++ +A M+++
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDE 438
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +Y++I+ AL + V M G P+ TYN ++ G+ +
Sbjct: 232 PNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TYN L+ L K + A + + M + G P + + TL+ G +
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G P+ ++++I +Y G++++A +F M +G P+ T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G+ ++A ++M +P +VYN+L+ +L K +A E+I M+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 283 EKG 285
++G
Sbjct: 472 DRG 474
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 124/273 (45%), Gaps = 9/273 (3%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G V A + E+ I +L P YN+++H+L ++ + + +M D G
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERL---SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH---VLGKGDKPL 132
D + +N ++ + + G++ + +L D M R G PD TY+ L+ + GK D+
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE-- 532
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A LL M VG P + + TL++G + ++ F EM + G PD++ Y +++
Sbjct: 533 -ATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIIL 591
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
A++L+ G+ G + TYN ++ G C DEA M + +
Sbjct: 592 QGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQ 651
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N ++ L G+ EA ++ + G
Sbjct: 652 LETRTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 7/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ GF A F L+ C A +V R + P SYN +L L
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCD 174
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + Q M D+G PD+++Y V+ ++ G LD+ + EM G P+
Sbjct: 175 ENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV 234
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ ++ L K A+ +L M + G P+ + +++ G +G F +
Sbjct: 235 VTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PDVV Y ++ G +A+ +FD M +G P + TY ++++G+ G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E ++ M G +PN V++ L+ GK+ +A V M ++G
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 131/314 (41%), Gaps = 17/314 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPDIITYSTLIDGYCL 526
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +TYN ++ ++ +++ L EM SG SPD T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +P+V TY+ M G +
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK---------GKYI 288
E + ME GC N + N++V L G + A + + EK ++
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766
Query: 289 HLVS--KFKRYKRC 300
L+S K++ Y C
Sbjct: 767 DLLSGGKYQEYHSC 780
>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
Length = 794
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 149/320 (46%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M++NG RT+N ++ G ++ + K P +YN+++ L +
Sbjct: 260 MVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGR 319
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M+ G P+I TY ++ G L + H LLD M R+G P+ + ++I
Sbjct: 320 CTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSI 379
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL-DACKYF------- 172
L+ K K A+ + + M++ G +P + + T++ L ++G + DA +YF
Sbjct: 380 LICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDER 439
Query: 173 -----------------FD----------EMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
FD EM ++G D + + +I S+ G + +++
Sbjct: 440 LSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESE 499
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LFD M+ G PN+ TY+++I G+C+AGK DEA ++ M S G P+ + YNTL++
Sbjct: 500 KLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGY 559
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ +A + R M G
Sbjct: 560 CKISRMEDALVLFREMESSG 579
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SY +++ Y +M D G P+++TYN ++ A + +D+ +
Sbjct: 197 PDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEV 256
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L M ++G P+ TYN ++H +P A+ L M G +P V+ + +LMD L +
Sbjct: 257 LTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCK 316
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G + FD M +G P++ Y ++ Y G L + L D M+ G PN +
Sbjct: 317 NGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 376
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
++ +I + GK D+A + +M +G NP+ + Y T++ L +G++ +A M+
Sbjct: 377 FSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMI 436
Query: 283 EK 284
++
Sbjct: 437 DE 438
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 115/226 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+ +M +G PD +TY V+ + G+++ R ++M SP YN L+H L
Sbjct: 396 VFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
DK A L+ M + G + F +++D + G + + FD M G P+++
Sbjct: 456 IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNII 515
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y+ +I Y AG++++A L M++ G P+ TYN++I G+C + ++A + +EM
Sbjct: 516 TYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
ES G +P+ + YN ++ L + A A E+ + E G + L +
Sbjct: 576 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELST 621
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 87 MCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGF 146
+CA R D +L M + G P+ +YNILL L ++ AL LL M + G
Sbjct: 136 LCADKRTS--DAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGG 193
Query: 147 D--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
D P V+ +TT+++G + G+LD + EM ++G +P+VV Y +I + A ++KA
Sbjct: 194 DCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKA 253
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
++ M+ G +PN TYNS++ G+C +G+ EA +K+M S G P+ + YN+L+
Sbjct: 254 MEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDY 313
Query: 265 LRNAGKLAEAHEVIRHMVEKG 285
L G+ EA ++ M ++G
Sbjct: 314 LCKNGRCTEARKMFDSMTKRG 334
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 115/243 (47%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P +YN+I+ AL + V M G P+ TYN ++ G+ +
Sbjct: 232 PNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGF 291
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L +M G PD TYN L+ L K + A + + M + G P + + TL+ G +
Sbjct: 292 LKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYAT 351
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G L D M G P+ ++++I +Y G++++A +F M +G P+ T
Sbjct: 352 KGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVT 411
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y ++I C +G+ ++A ++M +P +VYN+L+ +L K +A E+I M+
Sbjct: 412 YGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEML 471
Query: 283 EKG 285
++G
Sbjct: 472 DRG 474
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 129/290 (44%), Gaps = 7/290 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I+ GF A F L+ C A +V R + P SYN +L L
Sbjct: 117 VIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ--LGCIPNVFSYNILLKGLCD 174
Query: 58 IRQYKLIEWVYQQMSDEG--YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ + + Q M D+G PD+++Y V+ ++ G LD+ + EM G P+
Sbjct: 175 ENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNV 234
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TYN ++ L K A+ +L M + G P+ + +++ G +G F +
Sbjct: 235 VTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKK 294
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M + G PDVV Y ++ G +A+ +FD M +G P + TY ++++G+ G
Sbjct: 295 MHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
E ++ M G +PN V++ L+ GK+ +A V M ++G
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG 404
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 3/270 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
++C G V A + E+ I +L P YN+++H+L ++ + + +M D G
Sbjct: 418 ILCKSGRVEDAMRYFEQMIDERL---SPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474
Query: 76 YAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAAL 135
D + +N ++ + + G++ + +L D M R G P+ TY+ L+ K A
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL M VG P + + TL++G + ++ F EM + G PD++ Y +++
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNF 255
A++L+ G+ G + TYN ++ G C DEA M + +
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654
Query: 256 LVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+N ++ L G+ EA ++ + G
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANG 684
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G FN +I C G V + K+ + ++ +P +Y+ ++
Sbjct: 470 MLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR---IGVKPNIITYSTLIDGYCL 526
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + M G PD +TYN ++ ++ +++ L EM SG SPD T
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + + AA L + E G + + ++ GL + D F +
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ + +MI + + G ++A+DLF + G +P+V TY+ M G +
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLE 706
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
E + ME GC N + N++V L G + A + + EK
Sbjct: 707 ELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEK 753
>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 592
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 147/330 (44%), Gaps = 49/330 (14%)
Query: 3 ENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILHAL 55
+ G+ + +T+ +LI C G+ VG RK+ ER N+ P Y+ ++ L
Sbjct: 174 KTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEER-------NWNPNVVVYSTVMDGL 226
Query: 56 LGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
+ +MS +G P+++TY ++ G+ + LLDEM + G PD
Sbjct: 227 CKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDL 286
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
+ NIL+ VL K K + A +++ M VG P V + +L+D +D F+
Sbjct: 287 QSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFEL 346
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M ++GC+PD+V YT +I + + KA L D MI G P+V T+ ++I GFC G+
Sbjct: 347 MVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGR 406
Query: 236 -----------------------------------FDEACTMMKEMESRGCNPNFLVYNT 260
EA ++ ME + N ++Y+
Sbjct: 407 PLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSI 466
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
++ + +AGKL A E+ + KG I++
Sbjct: 467 ILDGMCSAGKLNTALELFSCLPAKGLQINV 496
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G ++ NIL+ C G++ A+ V+ I L P +YN+++
Sbjct: 277 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMI---LVGEVPDVFTYNSLIDRYCL 333
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q V++ M G PDI+ Y ++ ++ +++ LLDEM + GF+PD T
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+ L+ + +PLAA L +M + G P++ ++DGL ++ L F M
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
++V Y++++ +AG+L A +LF + KG NV+ Y MI GF G D
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLD 513
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ ME GC P+ YN V L ++A + + + M +KG
Sbjct: 514 KAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 145/294 (49%), Gaps = 8/294 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G + TF ILI C G+VG A ++V+ K+ +R +Y +++ L
Sbjct: 137 MLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKT---GYRSDVKTYGVLINGLCK 193
Query: 58 I-RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + + + W+ ++M + + P+++ Y+ VM + G + + L EM G P+
Sbjct: 194 MGKTSEAVGWL-RKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLV 252
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TY L+ L + A +LL+ M ++G P + L+D L + G + K M
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
G +PDV Y +I Y ++++A +F+ M+++G LP++ Y S+I G+C
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHL 290
++A ++ EM G P+ + + TL+ G+ A E+ +M + G+ +L
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNL 426
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 129/282 (45%), Gaps = 35/282 (12%)
Query: 39 FNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+P N ++++L ++ V M G P ++T+ I++ G + +
Sbjct: 105 LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGR 164
Query: 99 FHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMD 158
L+D + ++G+ D TY +L++ L K K A+ L M+E ++P+V+ ++T+MD
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224
Query: 159 GLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDG-------- 210
GL + G + EM+ KG P++V YT +I G ++A L D
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284
Query: 211 ---------------------------MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
MI G++P+VFTYNS+I +C+ + DEA +
Sbjct: 285 DLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVF 344
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ M SRGC P+ + Y +L+ + +A ++ M++ G
Sbjct: 345 ELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVG 386
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 1/206 (0%)
Query: 88 CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM-KEVGF 146
C +L +D+ M + P + +LL + K A++L+ M +G
Sbjct: 48 CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107
Query: 147 DPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQD 206
P +++ L + M G P VV +T++I G++ +A +
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167
Query: 207 LFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLR 266
L D + G +V TY +I G C GK EA +++ME R NPN +VY+T++ L
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227
Query: 267 NAGKLAEAHEVIRHMVEKGKYIHLVS 292
G ++EA + M KG +LV+
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVT 253
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 1/200 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
MI+ GF T+ LI +VG E F+ + P + IL L +
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
++ M +I+ Y+I++ GKL+ L + G + + Y I
Sbjct: 442 LSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTI 501
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
+++ K A +LL++M+E G P + + GL + + M +KG
Sbjct: 502 MINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKG 561
Query: 181 CMPDVVCYTVMITSYIAAGE 200
D T MI +Y++ +
Sbjct: 562 FSVDAT-TTEMIINYLSTNQ 580
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 8/287 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY-APD 79
G+ + K + F + K P YN ++ L+ ++ I +Y ++ EG +PD
Sbjct: 170 GKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPD 229
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+TY+ ++ A +L + D RL DEM +G P Y +L + K +K AAL L+
Sbjct: 230 TITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVE 289
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
MK G P+V +T L+ GL + G +D F M GC PDVV +I AG
Sbjct: 290 EMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAG 349
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKEMESRGCNPNFLVY 258
LE A LF M + PNV TYN++I+ F EA ++M++ G P+ Y
Sbjct: 350 RLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTY 409
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
L+ ++ +A ++ M EKG Y L+ R KR
Sbjct: 410 AILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKR 456
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRL-GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++ +M AP+++TYN V+ A + + ++M +G +P TY IL+
Sbjct: 357 LFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGF 416
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ++ AL LL M E GF P + +L+D L RA +A F E+
Sbjct: 417 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSA 476
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y VMI + G L A DLF M G P+V+TYN+++ G AG DEA ++M+
Sbjct: 477 RVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRN 536
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
M GC P+ +N +++ L G A E+ M E
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKE 574
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 126/287 (43%), Gaps = 3/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G N LI G G ++ F K P +YN ++ A+ +
Sbjct: 326 MLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKA 385
Query: 61 --YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ W +++M G AP TY I++ + ++++ LL+EM GF P Y
Sbjct: 386 PASEAALW-FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAY 444
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ LG+ + AA L +KE S + ++ G L F EM
Sbjct: 445 CSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKK 504
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC PDV Y +++ I AG +++A L M G P++ ++N ++ G G
Sbjct: 505 LGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKR 564
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M +M+ P+ + YNT++S L AG A +++R M KG
Sbjct: 565 AIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG 611
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 125/310 (40%), Gaps = 36/310 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++ LI G++ F + K P + Y IL + + + + ++M
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G AP + TY ++ ++G++D + L M + G PD N L+++LG+ +
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRL 351
Query: 132 LAALNL------------------------------------LNHMKEVGFDPSVLHFTT 155
AL L MK G PS +
Sbjct: 352 EDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAI 411
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+DG + ++ +EM KG P Y +I S A E A +LF +
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENC 471
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ Y MI+ F G+ +A + EM+ GC+P+ YN L+S + AG + EAH
Sbjct: 472 GRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAH 531
Query: 276 EVIRHMVEKG 285
++R+M E G
Sbjct: 532 SLMRNMRENG 541
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G G V+ F + K P +YNA++ ++
Sbjct: 469 ENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMID 528
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + M + G PDI ++NI++ + G + + +M S PD +YN +L
Sbjct: 529 EAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTIL 588
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L + A L+ MK GF+ + ++++++ + +
Sbjct: 589 SCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGK 628
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG ++ NI++ + G ++ +E F K K P SYN IL L
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGM 596
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+++ + ++M +G+ D +TY+ ++ A +GK+D+
Sbjct: 597 FEMAAKLMREMKLKGFEYDSITYSSILEA---VGKVDE 631
>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
Length = 482
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 132/263 (50%), Gaps = 10/263 (3%)
Query: 36 SKLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAK 90
+L +FR N SYN +++A ++ ++ +M G AP TYN + +C
Sbjct: 90 QELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRV 149
Query: 91 YRLGKLDQFH-RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPS 149
RLG+ QF+ RLL SG F TYNIL+ K D+ A+ LLN + G +
Sbjct: 150 ERLGEAQQFYERLLS----SGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVT 205
Query: 150 VLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFD 209
+ ++D L + G + + FF+ M G P V +TV+I A + +A+++F
Sbjct: 206 SAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFF 265
Query: 210 GMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
+ G P+V + ++ GFC G DEA + + M +RGC PN + N L++ L A
Sbjct: 266 SYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAK 325
Query: 270 KLAEAHEVIRHMVEKGKYIHLVS 292
+L++A EV +V++ +V+
Sbjct: 326 RLSQAREVFEEVVKRQAKPDVVT 348
Score = 110 bits (275), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 136/301 (45%), Gaps = 35/301 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
++NILI + + ++ F + K P ++YN ++ L + + + Y+++
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162
Query: 72 SDEGYAPDILTYNIVM---CAKYRL--------------------------------GKL 96
G +TYNI++ C R+ GK+
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKI 222
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+ + M + G P T+ +L+ L K ++ A + E G PSV+ + L
Sbjct: 223 HEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCL 282
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
MDG + G +D F+ M N+GC P+ V ++I A L +A+++F+ ++ +
Sbjct: 283 MDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQA 342
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHE 276
P+V TY++ + G C A + D+A ++ + +G P+ ++Y L+S L + G+L EA +
Sbjct: 343 KPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARK 402
Query: 277 V 277
V
Sbjct: 403 V 403
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 130/265 (49%), Gaps = 1/265 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G T+ +N +I T + G + F + + RP + ++ ++ L +
Sbjct: 197 LVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANR 256
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++ + G +P ++ + +M + G +D+ R+ + M G +P+ + NI
Sbjct: 257 VARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNI 316
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K + A + + + P V+ ++T MDGL RA +D + + +KG
Sbjct: 317 LINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKG 376
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFD-GMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
PDVV YT +I+ + G L++A+ +F+ M G PN FT N ++ GF +AG+ DEA
Sbjct: 377 GTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEA 436
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSN 264
+ + RG P+ ++ + +N
Sbjct: 437 RELFQRFVERGVQPDCRTFSAMANN 461
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%)
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
H NI + L K D A + +K+ + + + L++ + +D F E
Sbjct: 67 HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
M GC P Y +I L +AQ ++ +++ G + TYN ++ GFC A +
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA ++ E+ +RG YN ++ L GK+ EA M + G
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDG 236
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L HV GK D+ AL L + + D L L+ LS+AG + C M ++
Sbjct: 9 LCHV-GKLDE---ALELFHSLVS---DGCGLPADLLVRELSKAGRAEECLKVVKLMLDRQ 61
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
+ + + I S + ++KA+ F + L N +YN +I FC + DEA
Sbjct: 62 QLRERHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAI 121
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EM++ GC P+ YNTL+ L +L EA + ++ G ++
Sbjct: 122 QLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFIT 173
>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
gi|219887141|gb|ACL53945.1| unknown [Zea mays]
Length = 522
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 141/287 (49%), Gaps = 6/287 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
++ G A T +IL+ C G+V A +V+E + + L P YN +++ +
Sbjct: 148 LKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV---PTTVIYNTLINGYCQV 204
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
R + +++QM PD +TYN ++ +L + + L+ EM +SG P T+
Sbjct: 205 RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETF 264
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ G + +L+ M++ G V+ F +++ + G + D+M
Sbjct: 265 NTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIY 324
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
K P+ Y +I +YI +G+ E+A L + M G ++ TYN +++G C + + DE
Sbjct: 325 KDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDE 384
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A ++ + ++G P+ + YNT++S N G +A E+++ M + G
Sbjct: 385 AEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYG 431
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 133/290 (45%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E P A ++N++I G ++ F + P +YN ++ + +
Sbjct: 9 EGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLE 68
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ QM +G P+I+TYN+++ R G++D+ L+DEM PD TY+IL
Sbjct: 69 AGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILF 128
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L + + L+L + G + L++GL + G + + + + + G +
Sbjct: 129 DGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLV 188
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTM 242
P V Y +I Y +L A +F+ M ++ P+ TYN++I G C +A +
Sbjct: 189 PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDL 248
Query: 243 MKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ EME G +P+ +NTL+ AG+L + V+ M +KG ++S
Sbjct: 249 VMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVIS 298
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 140/292 (47%), Gaps = 5/292 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +GF T++IL G +R ++ F +S + + +L+ L +
Sbjct: 117 MFPDGF-----TYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGK 171
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
E V + + G P + YN ++ ++ L + ++M PD TYN
Sbjct: 172 VAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNA 231
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L K + A +L+ M++ G DPSV F TL+D AG L+ C +M KG
Sbjct: 232 LINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG 291
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
DV+ + ++ ++ G++ +A + D MI K PN YNS+I + +G ++A
Sbjct: 292 IKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAF 351
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
++++M++ G + + + YN L+ L + ++ EA E+I + +G +VS
Sbjct: 352 LLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVS 403
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 2/275 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI ++ + K + ++ + P ++N ++ A Q + V M
Sbjct: 228 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 287
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV-LGKGDK 130
+G D++++ V+ A + GK+ + +LD+M +P+ YN ++ + GD
Sbjct: 288 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 347
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L L+ MK G S++ + L+ GL R+ +D + + N+G PDVV Y
Sbjct: 348 EQAFL-LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNT 406
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+I++ G+ +KA +L M G P + TY++++ AG+ + + ++M +
Sbjct: 407 IISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKN 466
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +Y +V ++ + + M EKG
Sbjct: 467 VEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
G ++N +I C G K +E + + RP +Y+ ++ AL +
Sbjct: 395 QGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHD 454
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+E +YQQM + P Y I++ A R + L EM G + D
Sbjct: 455 MECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 2/221 (0%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
W +++M G+ P+++ N ++ ++ Q L +EMGR G + +T+NIL +VL
Sbjct: 207 WSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVL 266
Query: 126 GKGDKPLAALN-LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ D + +N L M+E GFDP V+ + TL+D R G L+ Y + M +G MPD
Sbjct: 267 CR-DGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPD 325
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V YT ++ G + +A LF MI +G P+V YN++I +C G EA +++
Sbjct: 326 LVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLH 385
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM G +P+ LV G+L A ++ + + G
Sbjct: 386 EMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLG 426
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 21/267 (7%)
Query: 39 FNFRPFKNSYNAILHALLGIRQY----KLIEWVYQQMSDEGYAPDILTYNIVMCAKY--- 91
+ R ++Y I+H L RQ+ K + + + D + D+ N+V+C ++
Sbjct: 126 LDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQ-NLVLCTEHCNW 184
Query: 92 ----------RLGKLDQFHRL---LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
KLD H +M + GF P+ N +L+ L K L
Sbjct: 185 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 244
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M +G + F L L R G+++ F ++M +G PDVV Y +I SY+
Sbjct: 245 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 304
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G LE A L+ M +G +P++ +Y S++RG C G+ EA + M RG +P+ ++Y
Sbjct: 305 GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLY 364
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NTL+ G L EA ++ M+ G
Sbjct: 365 NTLIGAYCKDGMLQEARSLLHEMIGIG 391
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F +LI ++ L + F K F P + N IL+ L ++ +Y++M
Sbjct: 189 FEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMG 248
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
G + T+NI+ R G +++ + L++M GF PD TYN L+ + +
Sbjct: 249 RIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLE 308
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A L M G P ++ +T+LM GL R G + F M ++G PDVV Y +I
Sbjct: 309 DAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLI 368
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+Y G L++A+ L MI G P+ FT ++ G+ G+ A ++ E++ G
Sbjct: 369 GAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVT 428
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+Y L+ +L + A ++ ++E
Sbjct: 429 VAHDIYKYLIISLCREDRPFAAKSLLERILEDS 461
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 6/282 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + A TFNIL +C G+V +E+ + F P +YN ++ + + +
Sbjct: 251 GVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEE---GFDPDVVTYNTLIDSYVRRGRL 307
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++Y+ M G PD+++Y +M RLG++ + H+L M G PD YN L
Sbjct: 308 EDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTL 367
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K A +LL+ M +G P L++G R G L + E+ G
Sbjct: 368 IGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGV 427
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
Y +I S A+ L + ++ P+ YN +I FC + EA
Sbjct: 428 TVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALL 487
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ EM +R P Y +L+ + + + ++ MVE
Sbjct: 488 LKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVE 529
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 6/281 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR---PFKNSYNAILHALLG 57
M E GF T+N LI + G ++ + F K+ R P SY +++ L
Sbjct: 282 MEEEGFDPDVVTYNTLIDSYVRRG---RLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCR 338
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ +M D G PD++ YN ++ A + G L + LL EM G PD T
Sbjct: 339 LGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFT 398
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
IL+ G+ + ++ALNL+ ++++G + + L+ L R A K + +
Sbjct: 399 CRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERIL 458
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD Y +I S+ + + +A L MI + P TY S+I C +
Sbjct: 459 EDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSV 518
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ +M EM P+ + LV+ G +A ++
Sbjct: 519 DGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLL 559
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 70/170 (41%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+++ ++ + PD YN ++ + R + + L EM + P TY L+H + +
Sbjct: 455 ERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEI 514
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
++ + L+ M E P L++G + GN D + A D +
Sbjct: 515 NRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAKDFQFFDSESF 574
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
++ Y G K +L D M+ G LPN T +I G + + ++
Sbjct: 575 NSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 624
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 130/301 (43%), Gaps = 40/301 (13%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
G+ A +VV IK + P +Y A++ L + V+ M ++ P++
Sbjct: 129 GKTREASEVVGEMIKKSV----PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNV 184
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
Y ++ A R KLD +RL EM + G+ P TY +LL L G + A ++ +
Sbjct: 185 DVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSS 244
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE------------------------- 175
M+ G P + +L+ G AG + K F E
Sbjct: 245 MRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRAS 304
Query: 176 -----------MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
M +KGC+P + Y +I + A E++KA LF M KG PN Y+
Sbjct: 305 KVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYS 364
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ I G C GK +EA ++ RGC P+ + YN L+ L A ++ EAH + R M E+
Sbjct: 365 TFIDGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGER 424
Query: 285 G 285
G
Sbjct: 425 G 425
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G+ T +L+ E+ +V E F + + +YNAIL AL+
Sbjct: 36 MVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGD 95
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +G P +L Y ++ + GK + ++ EM + PD TY
Sbjct: 96 FDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTA 154
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ VL K ++ A+ + + M E P+V +T+L+ R LD F EM +G
Sbjct: 155 LISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRG 214
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P Y +++ G A D+ M ++G +P+ TY S+I G CMAG+ EA
Sbjct: 215 YGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAK 274
Query: 241 TMMKE-MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ KE +E + +YN L+ L A K+ EA EV MV+KG
Sbjct: 275 VLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKG 320
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P ++SYN ++ L + + M EGY PD++T +++ + ++ + L
Sbjct: 8 PDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCEL 67
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
E+ +G + YN +L L + G P VL + T++D L +
Sbjct: 68 FQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKTMLDCLIK 127
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
G EM K +PD + YT +I+ + A +FD M+ K +PNV
Sbjct: 128 TGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDV 186
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y S++ C K D A + EM RG P+ Y L+ L N G+ A+++ M
Sbjct: 187 YTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMR 246
Query: 283 EKG 285
+G
Sbjct: 247 SRG 249
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 108/223 (48%), Gaps = 7/223 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
MI+ G+ +A T+ +L+ C G LA + ++S+ P +N+Y ++++
Sbjct: 210 MIQRGYGPSASTYGLLLRCLCNGGRSYLAYDI-HSSMRSR--GHVPDENTYASLIYGCCM 266
Query: 58 IRQYKLIEWVYQQ-MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + ++++ + E D YN+++ R K+++ + M G P
Sbjct: 267 AGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQ 326
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ K ++ AL L M+E GF P+ + ++T +DGL + G ++ FF +
Sbjct: 327 TYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQS 386
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
+GC+PD V Y +I A +++A L+ M +G + +
Sbjct: 387 VERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIAD 429
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 103/230 (44%), Gaps = 2/230 (0%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M ++G PD +YN+++ +L +DQ +L M G+ PD T +L+ + +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
L ++ G +L + ++ L +G+ D F D G +P V+ Y
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
M+ I G+ +A ++ MI K +P+ TY ++I C + D+A + M +
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKK-SVPDGMTYTALISVLCKHNRADDAMKVFDIMVEKE 179
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSKFKRYKRC 300
PN VY +L++ KL A+ + M+++G Y S + RC
Sbjct: 180 IVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRG-YGPSASTYGLLLRC 228
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 124/289 (42%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+E+G ++N+L+ V AR ++ + + P + ++
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGE---GYDPDVVTCGLLVDKFCE 57
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ + ++Q++ G A +L YN ++ A G D + D G P
Sbjct: 58 MKRVGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLA 117
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L L K K A ++ M + P + +T L+ L + D FD M
Sbjct: 118 YKTMLDCLIKTGKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMV 176
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
K +P+V YT ++ ++ +L+ A LF MI +G P+ TY ++R C G+
Sbjct: 177 EKEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSY 236
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
A + M SRG P+ Y +L+ AG++ EA + + ++E K
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEK 285
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 133/287 (46%), Gaps = 8/287 (2%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGY-APD 79
G+ + K + F + K P YN ++ L+ ++ I +Y ++ EG +PD
Sbjct: 170 GKAKMVNKALSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPD 229
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLN 139
+TY+ ++ A +L + D RL DEM +G P Y +L + K +K AAL L+
Sbjct: 230 TITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVE 289
Query: 140 HMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAG 199
MK G P+V +T L+ GL + G +D F M GC PDVV +I AG
Sbjct: 290 EMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAG 349
Query: 200 ELEKAQDLFDGMITKGQLPNVFTYNSMIRG-FCMAGKFDEACTMMKEMESRGCNPNFLVY 258
LE A LF M + PNV TYN++I+ F EA ++M++ G P+ Y
Sbjct: 350 RLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTY 409
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
L+ ++ +A ++ M EKG Y L+ R KR
Sbjct: 410 AILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKR 456
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 103/218 (47%), Gaps = 1/218 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRL-GKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++ +M AP+++TYN V+ A + + ++M +G +P TY IL+
Sbjct: 357 LFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGF 416
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K ++ AL LL M E GF P + +L+D L RA +A F E+
Sbjct: 417 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSA 476
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y VMI + G L A DLF G P+V+TYN+++ G AG DEA ++M+
Sbjct: 477 RVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRN 536
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
M GC P+ +N +++ L G A E+ M E
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKE 574
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 125/287 (43%), Gaps = 3/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+++G N LI G G ++ F K P +YN ++ A+ +
Sbjct: 326 MLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKA 385
Query: 61 --YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ W +++M G AP TY I++ + ++++ LL+EM GF P Y
Sbjct: 386 PASEAALW-FEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAY 444
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ LG+ + AA L +KE S + ++ G L F E
Sbjct: 445 CSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEK 504
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
GC PDV Y +++ I AG +++A L M G P++ ++N ++ G G
Sbjct: 505 LGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKR 564
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M +M+ P+ + YNT++S L AG A +++R M KG
Sbjct: 565 AIEMFTKMKESEIMPDAVSYNTILSCLSRAGMFEMAAKLMREMKLKG 611
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 124/310 (40%), Gaps = 36/310 (11%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T++ LI G++ F + K P + Y IL + + + + ++M
Sbjct: 232 TYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEM 291
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+G AP + TY ++ ++G++D + L M + G PD N L+++LG+ +
Sbjct: 292 KGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRL 351
Query: 132 LAALNL------------------------------------LNHMKEVGFDPSVLHFTT 155
AL L MK G PS +
Sbjct: 352 EDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAI 411
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
L+DG + ++ +EM KG P Y +I S A E A +LF +
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENC 471
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ Y MI+ F G+ +A + E E GC+P+ YN L+S + AG + EAH
Sbjct: 472 GRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAH 531
Query: 276 EVIRHMVEKG 285
++R+M E G
Sbjct: 532 SLMRNMRENG 541
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 73/160 (45%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++AR + ++I G G V+ F + + P +YNA++ ++
Sbjct: 469 ENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAGMID 528
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ + M + G PDI ++NI++ + G + + +M S PD +YN +L
Sbjct: 529 EAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTIL 588
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
L + A L+ MK GF+ + ++++++ + +
Sbjct: 589 SCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAVGK 628
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG ++ NI++ + G ++ +E F K K P SYN IL L
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGM 596
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
+++ + ++M +G+ D +TY+ ++ A +GK+D+
Sbjct: 597 FEMAAKLMREMKLKGFEYDSITYSSILEA---VGKVDE 631
>gi|115466932|ref|NP_001057065.1| Os06g0199100 [Oryza sativa Japonica Group]
gi|51091829|dbj|BAD36643.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113595105|dbj|BAF18979.1| Os06g0199100 [Oryza sativa Japonica Group]
Length = 1283
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 142/284 (50%), Gaps = 10/284 (3%)
Query: 3 ENGFPTTARTFNILICTCGE---VGLARKVVERFIKSKLFNFRPFKNSYNAIL--HALLG 57
+ G A T+N LI C + + A V E I S+ RP +YNA++ H G
Sbjct: 126 QAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASEC---RPDLWTYNAMVSVHGRCG 182
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
Q E +++++ ++G+ PD +TYN ++ A + G +++ R+ +E+ ++GF D T
Sbjct: 183 KAQEA--ELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDGIT 240
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN ++H+ GK + AL L + M+ +G P + +T L+D L + + +EMA
Sbjct: 241 YNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMA 300
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P +V ++ +I +Y +G + A+ FD M+ G P+ Y M+ F + +
Sbjct: 301 DAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETR 360
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ + + M G P+ +Y L++ L + E VI+ M
Sbjct: 361 KLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDM 404
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 118/237 (49%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N ++ G G A++ F + F+P +YN++L+A + +E V +++
Sbjct: 170 TYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEEL 229
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G+ D +TYN ++ ++G+LD L DEM G +PD TY +L+ LGK D+
Sbjct: 230 VKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRI 289
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A +L M + G P+++ F+ L+ +++G D + FD M G PD + Y VM
Sbjct: 290 SEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVM 349
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+ + + E K L+ MI G P+ Y ++ + DE ++++ME+
Sbjct: 350 LDVFARSDETRKLMVLYRAMIKDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEA 406
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 111/252 (44%), Gaps = 37/252 (14%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA--AL 135
P + +N +M R G+ D +LLD M PD ++N L++ K A AL
Sbjct: 59 PTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVAL 118
Query: 136 NLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSY 195
LL+ +++ G P + + TL+ S+ NLD F+EM C PD+ Y M++ +
Sbjct: 119 ELLHEVRQAGLRPDAITYNTLISACSQGSNLDDAVAVFEEMIASECRPDLWTYNAMVSVH 178
Query: 196 IAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA---------------------- 233
G+ ++A+ +F ++ KG P+ TYNS++ F
Sbjct: 179 GRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKAGFRKDG 238
Query: 234 -------------GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
G+ D A + EM + GC P+ + Y LV +L +++EA +V+
Sbjct: 239 ITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEE 298
Query: 281 MVEKGKYIHLVS 292
M + G LV+
Sbjct: 299 MADAGLKPTLVT 310
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 8/279 (2%)
Query: 12 TFNILI-----CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
+FN LI C G+A +++ ++ L RP +YN ++ A
Sbjct: 98 SFNTLINARAKSGCLAAGVALELLHEVRQAGL---RPDAITYNTLISACSQGSNLDDAVA 154
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V+++M PD+ TYN ++ R GK + + E+ GF PD TYN LL+
Sbjct: 155 VFEEMIASECRPDLWTYNAMVSVHGRCGKAQEAELMFKELVEKGFQPDAVTYNSLLYAFA 214
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + + + GF + + T++ + G LD +DEM GC PD V
Sbjct: 215 KEGDVERVERVCEELVKAGFRKDGITYNTMIHMYGKMGRLDLALGLYDEMRAIGCTPDAV 274
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
YTV++ S + +A + + M G P + T++++I + +G+ D+A M
Sbjct: 275 TYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVTFSALICAYAKSGRQDDAERTFDRM 334
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ L Y ++ + + + + R M++ G
Sbjct: 335 VESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMIKDG 373
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 115/257 (44%), Gaps = 10/257 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
++E GF A T+N L+ G+V +V E +K+ FR +YN ++H
Sbjct: 194 LVEKGFQPDAVTYNSLLYAFAKEGDVERVERVCEELVKA---GFRKDGITYNTMIHMYGK 250
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + L +Y +M G PD +TY +++ + ++ ++ + ++L+EM +G P T
Sbjct: 251 MGRLDLALGLYDEMRAIGCTPDAVTYTVLVDSLGKMDRISEAGKVLEEMADAGLKPTLVT 310
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
++ L+ K + A + M E G P L + ++D +R+ + M
Sbjct: 311 FSALICAYAKSGRQDDAERTFDRMVESGVKPDRLAYLVMLDVFARSDETRKLMVLYRAMI 370
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PD Y V++ + E ++ + + M ++ + + +I+ C++
Sbjct: 371 KDGYKPDDGLYQVLLAALAKGNEHDEIEGVIQDMEAVFEMNPLVISSILIKAECIS---- 426
Query: 238 EACTMMKEMESRGCNPN 254
+ +++K +G P+
Sbjct: 427 QGASLLKRACLQGYEPD 443
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 104/232 (44%), Gaps = 1/232 (0%)
Query: 37 KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKL 96
K + P + Y ++ L ++++ +E + +M G+ PD++ N ++ G
Sbjct: 719 KAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNF 778
Query: 97 DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
D+ + + +G PD TYN L+ + + +P LL M + G P + + L
Sbjct: 779 DRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKIL 838
Query: 157 MDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
+ +A + F+EM KG + Y +M+ Y A KA+ L M G
Sbjct: 839 LAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDGI 898
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV-SNLRN 267
P + T + ++ + +G DEA ++ ++S + L Y+T++ + LRN
Sbjct: 899 EPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEISTLPYSTVLDAYLRN 950
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 121/278 (43%), Gaps = 6/278 (2%)
Query: 11 RTFNILICTCGEVGL---ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWV 67
R +N LI E GL AR + + IK P S N ++ AL+ + + V
Sbjct: 623 RIWNALIHAYAESGLYEHARAIFDIMIKKGPL---PTVESVNGMMRALIVDGRLDELYVV 679
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Q++ D T +++ A + G + + ++ + M +G+ P+ H Y I++ +L
Sbjct: 680 VQELQDLDIKISKSTVLLMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCH 739
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ ++ M+ GF P ++ TL+ + GN D + + G PD
Sbjct: 740 NKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDT 799
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y +I Y E+ L M +G P + +Y ++ A +++A + +EM
Sbjct: 800 YNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMR 859
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++G N +Y+ ++ RNA ++A ++ M E G
Sbjct: 860 TKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAMKEDG 897
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 94/222 (42%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F+P N +L G + VY + + G PD TYN ++ R + ++
Sbjct: 758 FKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGF 817
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL EMG+ G +P +Y ILL GK A L M+ G+ + + +M
Sbjct: 818 TLLYEMGKRGLTPKLESYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIY 877
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
A N ++ M G P + +++TSY +G ++A+ + + + + +
Sbjct: 878 RNARNHSKAEHLLSAMKEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSLKSSNLEIST 937
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
Y++++ + + T + EM+ G P+ V+ + +
Sbjct: 938 LPYSTVLDAYLRNRDYSLGITKLLEMKRDGVEPDHQVWTSFI 979
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 108/276 (39%), Gaps = 6/276 (2%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
+ LI E L + + F + P + Y +I++ + E YQ M
Sbjct: 520 YEYLITYLEEAELFPEACQVFCDMQFLGIVPSQKIYQSIIYTCC---RLGFPETAYQLMD 576
Query: 73 DEGYAP---DILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
D + +IL+ + M Y KL Q + + D +N L+H +
Sbjct: 577 DAARSDISLNILSCRVAMIEAYGKLKLWQQAENFVKGLKQESGVDRRIWNALIHAYAESG 636
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A + + M + G P+V +M L G LD E+ +
Sbjct: 637 LYEHARAIFDIMIKKGPLPTVESVNGMMRALIVDGRLDELYVVVQELQDLDIKISKSTVL 696
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+M+ ++ AG++ + +++GM G LPN+ Y MI C +F + M+ EME
Sbjct: 697 LMLEAFAKAGDVFEVMKIYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGA 756
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P+ +V NTL+ G EV ++E G
Sbjct: 757 GFKPDLVVLNTLLLMYTGTGNFDRTIEVYHSILEAG 792
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 92/215 (42%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y M GY P++ Y I++ + ++ EM +GF PD N LL +
Sbjct: 714 IYNGMKAAGYLPNMHLYRIMISLLCHNKRFRDVELMVAEMEGAGFKPDLVVLNTLLLMYT 773
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + + + E G +P + TL+ SR + EM +G P +
Sbjct: 774 GTGNFDRTIEVYHSILEAGLEPDEDTYNTLIVMYSRNFRPEEGFTLLYEMGKRGLTPKLE 833
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +++ + A E+A LF+ M TKG N Y+ M++ + A +A ++ M
Sbjct: 834 SYKILLAASGKAKLWEQADLLFEEMRTKGYRLNRSIYHMMMKIYRNARNHSKAEHLLSAM 893
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+ G P + L+++ +G EA +V+ +
Sbjct: 894 KEDGIEPTIATMHILMTSYGTSGHPDEAEKVLNSL 928
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE--A 274
LP V +N+M+ + +G+FD+A ++ M + P+ + +NTL++ +G LA A
Sbjct: 58 LPTVQVFNAMMGVYARSGRFDDARQLLDAMRDQDIEPDLVSFNTLINARAKSGCLAAGVA 117
Query: 275 HEVIRHMVEKG 285
E++ + + G
Sbjct: 118 LELLHEVRQAG 128
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 130/265 (49%), Gaps = 3/265 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI 80
GE+ R + E IK++ P SY+ ++H L+ K ++ +M ++G D
Sbjct: 565 GEIEKGRALFEE-IKAQ--GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDT 621
Query: 81 LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNH 140
YNIV+ + GK+++ ++LL+EM G P TY ++ L K D+ A L
Sbjct: 622 RAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 681
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
K D +V+ +++L+DG + G +D +E+ KG P+ + ++ + + A E
Sbjct: 682 AKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEE 741
Query: 201 LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNT 260
+++A F M PN TY+ M+ G C KF++A +EM+ +G PN + Y T
Sbjct: 742 IDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTT 801
Query: 261 LVSNLRNAGKLAEAHEVIRHMVEKG 285
++S L G + EA ++ G
Sbjct: 802 MISGLARVGNVLEAKDLFERFKSSG 826
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 4/270 (1%)
Query: 26 ARKVVERF--IKS-KLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILT 82
+RK+ E F I++ + F FRP ++Y ++ AL + + + +QM + GY +
Sbjct: 180 SRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHL 239
Query: 83 YNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMK 142
+ ++C R G++D LLDEM + F+ D YN+ + GK K A + +K
Sbjct: 240 FTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELK 299
Query: 143 EVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
G P + FT+++ L +A +D F+E+ + +P V Y MI Y + G+
Sbjct: 300 SQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFN 359
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A L + KG +P+V YN ++ GK +EA +++ M+ PN YN L+
Sbjct: 360 EAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA-PNLTSYNILI 418
Query: 263 SNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
L AG+L A +V M E G + ++++
Sbjct: 419 DMLCKAGELEAALKVQDSMKEAGLFPNIIT 448
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 120/239 (50%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+YNA+L + R + +E + ++MS G+ P T ++ + + KL + +++ M
Sbjct: 134 AYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETM 193
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+ F P + Y L+ L + L LL M+E+G++ +V FTTL+ +R G +
Sbjct: 194 RKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRV 253
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
DA DEM + D+V Y V I + G+++ A F + ++G +P+ T+ SM
Sbjct: 254 DAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSM 313
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
I C A + DEA + +E++S P YNT++ + GK EA+ ++ KG
Sbjct: 314 IGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKG 372
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 123/241 (51%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
F P N+ ++ + + R+ + V + M + P Y ++ A + D
Sbjct: 163 FGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPML 222
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
LL +M G+ H + L+ V + + AAL+LL+ MK F+ ++ + +D
Sbjct: 223 TLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCF 282
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ G +D FF E+ ++G +PD V +T MI A +++A +LF+ + + +P V
Sbjct: 283 GKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCV 342
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRH 280
+ YN+MI G+ GKF+EA ++++ + +GC P+ + YN +++ L GK+ EA ++
Sbjct: 343 YAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEA 402
Query: 281 M 281
M
Sbjct: 403 M 403
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 109/215 (50%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M G +PD++ N M ++ G++++ L +E+ G +PD +Y+IL+H L
Sbjct: 538 IYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLV 597
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
KG L MKE G + ++DG ++G ++ +EM KG P VV
Sbjct: 598 KGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVV 657
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I L++A LF+ +K NV Y+S+I GF G+ DEA +++E+
Sbjct: 658 TYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEEL 717
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
+G PN +N L+ L A ++ EA ++M
Sbjct: 718 MQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNM 752
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 146/292 (50%), Gaps = 6/292 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G R +NI+I C G+V A +++E +K+K +P +Y +++ L
Sbjct: 612 MKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEE-MKTK--GLQPTVVTYGSVIDGLAK 668
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
I + ++++ + +++ Y+ ++ ++G++D+ + +L+E+ + G +P+ +T
Sbjct: 669 IDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYT 728
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
+N LL L K ++ AL +MK + P+ + ++ +++GL + + F+ EM
Sbjct: 729 WNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQ 788
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G P+ + YT MI+ G + +A+DLF+ + G +P+ YN+MI G A K
Sbjct: 789 KQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAM 848
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
+A + +E +GC L+ L A L +A V + E K H
Sbjct: 849 DAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQH 900
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 113/220 (51%), Gaps = 2/220 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+Y++M D G P+ + Y ++ ++ G+ + H++ EM G SPD N + +
Sbjct: 503 LYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVF 562
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG-NLDACKYFFDEMANKGCMPDV 185
K + L +K G P V ++ L+ GL + G + D K F+ EM +G D
Sbjct: 563 KAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFY-EMKEQGLHLDT 621
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
Y ++I + +G++ KA L + M TKG P V TY S+I G + DEA + +E
Sbjct: 622 RAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEE 681
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+S+ + N +VY++L+ G++ EA+ ++ +++KG
Sbjct: 682 AKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKG 721
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 132/300 (44%), Gaps = 7/300 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G+ T F LIC G + + K +F YN + + +
Sbjct: 228 MQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGK 287
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + ++ +G PD +T+ ++ + ++D+ L +E+ + P + YN
Sbjct: 288 VDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNT 347
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ G K A +LL K G PSV+ + ++ L R G ++ + M
Sbjct: 348 MIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDA 407
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P++ Y ++I AGELE A + D M G PN+ T N MI C A + DEAC
Sbjct: 408 A-PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK------YIHLVSKF 294
++ ++ + C P+ + + +L+ L GK+ +A+ + M++ G+ Y L+ F
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 135/283 (47%), Gaps = 6/283 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
++NILI C GE+ A KV + ++ LF P + N ++ L ++ ++
Sbjct: 413 SYNILIDMLCKAGELEAALKVQDSMKEAGLF---PNIITVNIMIDRLCKAQRLDEACSIF 469
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+ + PD +T+ ++ R GK++ + L ++M SG +P+ Y L+ K
Sbjct: 470 LGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKC 529
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ + M G P ++ MD + +AG ++ + F+E+ +G PDV Y
Sbjct: 530 GRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSY 589
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
+++I + G + LF M +G + YN +I GFC +GK ++A +++EM++
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT 649
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
+G P + Y +++ L +L EA+ + K +++V
Sbjct: 650 KGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 1/274 (0%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N ++ G G + + R +++ + P SYN ++ L + + V M
Sbjct: 379 AYNCILTCLGRKGKVEEAL-RILEAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSM 437
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ G P+I+T NI++ + +LD+ + + +PD T+ L+ LG+ K
Sbjct: 438 KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKV 497
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A L M + G P+ + +T+L+ + G + + EM ++GC PD++
Sbjct: 498 NDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNY 557
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ AGE+EK + LF+ + +G P+V +Y+ +I G G + + EM+ +G
Sbjct: 558 MDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGL 617
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YN ++ +GK+ +A++++ M KG
Sbjct: 618 HLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 134/282 (47%), Gaps = 3/282 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
+N +I G VG + + K P +YN IL L + + + + M
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
+ AP++ +YNI++ + G+L+ ++ D M +G P+ T NI++ L K +
Sbjct: 404 KMDA-APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
A ++ + P + F +L+DGL R G ++ +++M + G P+ V YT +
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I ++ G E ++ M+ +G P++ N+ + AG+ ++ + +E++++G
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGL 582
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVSK 293
P+ Y+ L+ L G + +++ M E+G +HL ++
Sbjct: 583 TPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQG--LHLDTR 622
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/293 (28%), Positives = 132/293 (45%), Gaps = 16/293 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G T T+ LI C GE+ A KV++ + +L + + + +L
Sbjct: 390 MQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRL--------DVDEVTYTVLV 441
Query: 58 ---IRQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFS 112
++ K+ E V+ M G AP+++TY + + G + + LL EM G
Sbjct: 442 DGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLE 501
Query: 113 PDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYF 172
+ TYN L++ L K A+ + M G P V +TTL+D L ++G LD
Sbjct: 502 LNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDL 561
Query: 173 FDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCM 232
EM + G P +V Y V++ + +G +E + L + M+ K PN TYNS+++ +C+
Sbjct: 562 LQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCI 621
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K M SR PN YN L+ A + EA M+EKG
Sbjct: 622 GNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 127/253 (50%), Gaps = 9/253 (3%)
Query: 37 KLFNFRPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLG 94
+LF P KN SYN +L L G + + ++ +M+ PD++TY I++ LG
Sbjct: 252 ELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGILIHGYCALG 308
Query: 95 KLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHM--KEVGFDPSVLH 152
+L+ +LLD+M G P+ Y ++ +L + AL ++ M +V D +V
Sbjct: 309 ELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAV-- 366
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMI 212
+TT++ G G+L + + +FDEM KG D V YT +I AGEL++A+ + M+
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML 426
Query: 213 TKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLA 272
+ + TY ++ G+C GK EA + M RG PN + Y L L G +
Sbjct: 427 ARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQ 486
Query: 273 EAHEVIRHMVEKG 285
A+E++ M KG
Sbjct: 487 AANELLHEMSNKG 499
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
E P T+ ILI C GE+ A K+++ + + P Y +++ L
Sbjct: 287 EMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGV---EPNATVYTSVVALLCDKG 343
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ V + M D Y V+ G L R DEM R G + D TY
Sbjct: 344 RVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYT 403
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L++ L + + A +L M D + +T L+DG + G + + M +
Sbjct: 404 TLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQR 463
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
G P+VV YT + G+++ A +L M KG N TYNS+I G C AG D+A
Sbjct: 464 GVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQA 523
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M +M++ G P+ Y TL+ L +G+L AH++++ M++ G
Sbjct: 524 MRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNG 569
Score = 117 bits (293), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 128/287 (44%), Gaps = 6/287 (2%)
Query: 1 MIENGFPTTARTFN---ILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G A + L+C G V A VVE + K+ Y +L
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAV---YTTVLSGFCN 376
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +M +G A D +TY ++ R G+L + ++L EM D T
Sbjct: 377 KGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVT 436
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y +L+ K K A + N M + G P+V+ +T L DGL + G++ A EM+
Sbjct: 437 YTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMS 496
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
NKG + Y +I AG L++A M G P+V+TY ++I C +G+ D
Sbjct: 497 NKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELD 556
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
A +++EM G P + YN L++ +G++ +++ M+EK
Sbjct: 557 RAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK 603
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 126/277 (45%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+ +L+ C G++ A +V ++ + P +Y A+ L + +
Sbjct: 436 TYTVLVDGYCKRGKMAEAFQVHNTMVQRGVA---PNVVTYTALSDGLCKQGDVQAANELL 492
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+MS++G + TYN ++ + G LDQ R + +M +G PD +TY L+ L K
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
+ A +LL M + G P+++ + LM+G +G ++ K + M K P+ Y
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
++ Y ++ +++ GM ++ PN TYN +I+G C A EA EM
Sbjct: 613 NSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIE 672
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G Y+ L+ L K EA ++ M ++G
Sbjct: 673 KGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEG 709
>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 687
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 143/279 (51%), Gaps = 3/279 (1%)
Query: 16 LICTCGEVGLARKVVERFIKSK-LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDE 74
+I T G+ + + ++ F + + +F P SYN +L+A + +Q+ +E ++
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G AP++ TYN+++ + + ++ LD M + GF PD +Y+ +++ L K K A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE-MANKGCMPDVVCYTVMIT 193
L L + M E G P V + L+DG + + +D + + P+V + +MI+
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
G ++ +++ M + +++TY+S+I G C AG D+A ++ E++ R +
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ + YNT++ GK+ E+ E+ R M K +++VS
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-VNIVS 361
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 2/282 (0%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G R++N L+ E KV F + P +YN ++ ++++
Sbjct: 109 GCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKA 168
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
M EG+ PD+ +Y+ V+ + GKLD L DEM G +PD YNIL+
Sbjct: 169 RGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDG 228
Query: 125 LGKGDKPLAALNLLNH-MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
K A+ L + +++ P+V ++ GLS+ G +D C ++ M
Sbjct: 229 FLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREK 288
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
D+ Y+ +I AG ++KA+ +F+ + + +V TYN+M+ GFC GK E+ +
Sbjct: 289 DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ME + + N + YN L+ L GK+ EA + R M KG
Sbjct: 349 RIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 51 ILHALLG--IRQYKLIEWVY--QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ +AL+G IR +L E + ++M G P +++YNI++C + GK + + EM
Sbjct: 466 VCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM 525
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
+G+ PD TY+ILL L + K AL L + + G + V+ L+ GL G L
Sbjct: 526 LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKL 585
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
D M ++ C ++V Y ++ + G+ +A ++ M G P++ +YN++
Sbjct: 586 DDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTI 645
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
++G CM A + + G P +N LV + N
Sbjct: 646 MKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 130/324 (40%), Gaps = 52/324 (16%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNS-----YNAILHALLGIRQYKL 63
T+N ++ C CG K+ E +L+ KNS YN ++ LL +
Sbjct: 327 TYNTMLGGFCRCG------KIKESL---ELWRIMEHKNSVNIVSYNILIKGLLENGKIDE 377
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+++ M +GYA D TY I + G +++ ++ E+ SG D + Y ++
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
L K + A NL+ M + G + + L+ GL R L +F EM GC P
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY-------------------- 223
VV Y ++I AG+ +A M+ G P++ TY
Sbjct: 498 TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELW 557
Query: 224 ---------------NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
N +I G C GK D+A T+M ME R C N + YNTL+
Sbjct: 558 HQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKV 617
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
G A + +M + G ++S
Sbjct: 618 GDSNRATVIWGYMYKMGLQPDIIS 641
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T+ I I C G V A V++ ++S + + +Y +I+ L
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQE-VESSGGHLDVY--AYASIIDCLCK 441
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
++ + + ++MS G + N ++ R +L + L EMG++G P +
Sbjct: 442 KKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVS 501
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L K K A + M E G+ P + ++ L+ GL R +D + +
Sbjct: 502 YNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G DV+ + ++I + G+L+ A + M + N+ TYN+++ GF G +
Sbjct: 562 QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSN 621
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
A + M G P+ + YNT++ L
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%)
Query: 42 RPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHR 101
RP SYN ++ L ++ ++M + G+ PD+ TY+I++C R K+D
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
L + +SG D +NIL+H L K A+ ++ +M+ +++ + TLM+G
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
+ G+ + + M G PD++ Y ++ + A + FD G P V+
Sbjct: 616 KVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVY 675
Query: 222 TYNSMIRG 229
T+N ++R
Sbjct: 676 TWNILVRA 683
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 6/199 (3%)
Query: 1 MIENGFPTTARTFNILIC---TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M +NG T ++NILIC G+ G A V+ +++ ++P +Y+ +L L
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLEN---GWKPDLKTYSILLCGLCR 546
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ L ++ Q G D++ +NI++ +GKLD ++ M + + T
Sbjct: 547 DRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K A + +M ++G P ++ + T+M GL + FFD+
Sbjct: 607 YNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDAR 666
Query: 178 NKGCMPDVVCYTVMITSYI 196
N G P V + +++ + +
Sbjct: 667 NHGIFPTVYTWNILVRAVV 685
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 115/221 (52%), Gaps = 2/221 (0%)
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
W +++M G+ P+++ N ++ ++ Q L +EMGR G + +T+NIL +VL
Sbjct: 211 WSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMGRIGVHSNAYTFNILTYVL 270
Query: 126 GKGDKPLAALN-LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
+ D + +N L M+E GFDP V+ + TL+D R G L+ Y + M +G MPD
Sbjct: 271 CR-DGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLEDAFYLYKIMYRRGVMPD 329
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
+V YT ++ G + +A LF MI +G P+V YN++I +C G EA +++
Sbjct: 330 LVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLH 389
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM G +P+ LV G+L A ++ + + G
Sbjct: 390 EMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLG 430
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 21/267 (7%)
Query: 39 FNFRPFKNSYNAILHALLGIRQY----KLIEWVYQQMSDEGYAPDILTYNIVMCAKY--- 91
+ R ++Y I+H L RQ+ K + + + D + D+ N+V+C ++
Sbjct: 130 LDIRLSSHNYCLIIHILAWSRQFPLAMKFLSELIELSKDVSSSEDVFQ-NLVLCTEHCNW 188
Query: 92 ----------RLGKLDQFHRL---LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLL 138
KLD H +M + GF P+ N +L+ L K L
Sbjct: 189 NPVIFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELY 248
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
M +G + F L L R G+++ F ++M +G PDVV Y +I SY+
Sbjct: 249 EEMGRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRR 308
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G LE A L+ M +G +P++ +Y S++RG C G+ EA + M RG +P+ ++Y
Sbjct: 309 GRLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLY 368
Query: 259 NTLVSNLRNAGKLAEAHEVIRHMVEKG 285
NTL+ G L EA ++ M+ G
Sbjct: 369 NTLIGAYCKDGMLQEARSLLHEMIGIG 395
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F +LI ++ L + F K F P + N IL+ L ++ +Y++M
Sbjct: 193 FEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEMG 252
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
G + T+NI+ R G +++ + L++M GF PD TYN L+ + +
Sbjct: 253 RIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRLE 312
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A L M G P ++ +T+LM GL R G + F M ++G PDVV Y +I
Sbjct: 313 DAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLI 372
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
+Y G L++A+ L MI G P+ FT ++ G+ G+ A ++ E++ G
Sbjct: 373 GAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVT 432
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+Y L+ +L + A ++ ++E
Sbjct: 433 VAHDIYKYLIISLCREDRPFAAKSLLERILEDS 465
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 119/282 (42%), Gaps = 6/282 (2%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G + A TFNIL +C G+V +E+ + F P +YN ++ + + +
Sbjct: 255 GVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEE---GFDPDVVTYNTLIDSYVRRGRL 311
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ ++Y+ M G PD+++Y +M RLG++ + H+L M G PD YN L
Sbjct: 312 EDAFYLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTL 371
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+ K A +LL+ M +G P L++G R G L + E+ G
Sbjct: 372 IGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGV 431
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
Y +I S A+ L + ++ P+ YN +I FC + EA
Sbjct: 432 TVAHDIYKYLIISLCREDRPFAAKSLLERILEDSFQPDSDIYNKLIESFCRSNNVSEALL 491
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
+ EM +R P Y +L+ + + + ++ MVE
Sbjct: 492 LKLEMINRNYKPTTDTYKSLIHCMCEINRSVDGEGLMVEMVE 533
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 6/281 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFR---PFKNSYNAILHALLG 57
M E GF T+N LI + G ++ + F K+ R P SY +++ L
Sbjct: 286 MEEEGFDPDVVTYNTLIDSYVRRG---RLEDAFYLYKIMYRRGVMPDLVSYTSLMRGLCR 342
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + ++ +M D G PD++ YN ++ A + G L + LL EM G PD T
Sbjct: 343 LGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMIGIGIHPDSFT 402
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
IL+ G+ + ++ALNL+ ++++G + + L+ L R A K + +
Sbjct: 403 CRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPFAAKSLLERIL 462
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD Y +I S+ + + +A L MI + P TY S+I C +
Sbjct: 463 EDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEINRSV 522
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ +M EM P+ + LV+ G +A ++
Sbjct: 523 DGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLL 563
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 70/170 (41%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+++ ++ + PD YN ++ + R + + L EM + P TY L+H + +
Sbjct: 459 ERILEDSFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTYKSLIHCMCEI 518
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
++ + L+ M E P L++G + GN D + A D +
Sbjct: 519 NRSVDGEGLMVEMVESEVIPDHEICRALVNGYCKEGNADKAESLLVSFAQDFQFFDSESF 578
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
++ Y G K +L D M+ G LPN T +I G + + ++
Sbjct: 579 NSLVKVYRDVGNETKLMELQDRMLKAGFLPNSLTCRYIIHGIWKSMRLNK 628
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 132/285 (46%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+++ G T NI I E G + V ++S P +YN ++ L +
Sbjct: 141 VLKRGMSVNKFTCNIWIRGLCEGGRLEEAVA-LVESMDAYIAPDVVTYNTLMRGLCKDSK 199
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ ++M ++G PD TYN ++ + L + LL + GF PD TY
Sbjct: 200 VQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCS 259
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L++ L AL L N + P ++ + +L+ GL R G + +EM G
Sbjct: 260 LINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDG 319
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C PD+ Y ++I G + A + + I KG LP+VFT+N+MI G+C K D A
Sbjct: 320 CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL 379
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+++ M G P+ + YN++++ L AGK E +E M+ KG
Sbjct: 380 QLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 141/286 (49%), Gaps = 4/286 (1%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
I GF T+ LI G + +E F +++ + +P YN+++ L RQ
Sbjct: 246 IFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL--CRQG 303
Query: 62 KLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
++ V +M ++G PDI TYNIV+ ++G + ++++ G+ PD T+N
Sbjct: 304 LILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 363
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
++ K K +AL L+ M G P + + ++++GL +AG F+EM K
Sbjct: 364 TMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILK 423
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC P+ + Y ++I ++ +LE+A + M G +P+ ++N++I GFC G D A
Sbjct: 424 GCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++++ +G + +N L+ + + A ++ M+ KG
Sbjct: 484 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 529
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 140/291 (48%), Gaps = 12/291 (4%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVV-ERFIKSKLFNFRPFKNSYNAILHALL 56
M+E+G T+NI+I C G + A V+ + +K L + F + L
Sbjct: 315 MVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLK 374
Query: 57 GIRQYKLIE--WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+L+E W+Y G APD +TYN V+ + GK + + +EM G P+
Sbjct: 375 LDSALQLVERMWMY------GIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPN 428
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
TYNIL+ K ++ A ++ M + G P + F TL+ G R G+LD F
Sbjct: 429 AITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQ 488
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAG 234
++ KG + ++I +Y + ++ A+ +F MI+KG P+++TY ++ G C A
Sbjct: 489 KLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAA 548
Query: 235 KFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
D A + EM S+G P+ + ++++L +++EA +I MV G
Sbjct: 549 NVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMG 599
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 130/280 (46%), Gaps = 12/280 (4%)
Query: 12 TFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N L +C +V A + + R + P +YN I+ G + +++
Sbjct: 186 TYNTLMRGLCKDSKVQEAAQYLRRMMNQGCI---PDDFTYNTIID---GYCKRDMLQEAT 239
Query: 69 QQMSD---EGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
+ + D +G+ PD +TY ++ G +++ L +E PD YN L+ L
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ L AL ++N M E G P + + +++GL + GN+ ++ KG +PDV
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
+ MI Y +L+ A L + M G P+ TYNS++ G C AGK E +E
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEE 419
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M +GC PN + YN L+ N +L EA VI M + G
Sbjct: 420 MILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 120/317 (37%), Gaps = 69/317 (21%)
Query: 38 LFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDI----------------- 80
LF P +YNAI+ AL+ + VY +M G APD
Sbjct: 3 LFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPH 62
Query: 81 ------------------LTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
L Y V+ Y G L DEM R PD T+N +L
Sbjct: 63 VALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVL 122
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFD----------------------------------P 148
H L + + + LL + + G P
Sbjct: 123 HALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAP 182
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
V+ + TLM GL + + + M N+GC+PD Y +I Y L++A +L
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELL 242
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
I KG +P+ TY S+I G C G + A + E +++ P+ +VYN+LV L
Sbjct: 243 KDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 302
Query: 269 GKLAEAHEVIRHMVEKG 285
G + A +V+ MVE G
Sbjct: 303 GLILHALQVMNEMVEDG 319
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 63/176 (35%), Gaps = 35/176 (19%)
Query: 141 MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGE 200
M G P+ + +MD L D + M + G PD +TV I S+ G
Sbjct: 1 MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60
Query: 201 LE-----------------------------------KAQDLFDGMITKGQLPNVFTYNS 225
A+ LFD M+ + P+V T+N+
Sbjct: 61 PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
++ C G E+ ++ ++ RG + N N + L G+L EA ++ M
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM 176
>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Cucumis sativus]
Length = 505
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 138/281 (49%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G + I+I + G + E + K KL P +YN+++ + L
Sbjct: 172 GLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLA 231
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
V+ ++S G A + +TYNI++ R G++ + LL+ M R+ +P T+N+L+
Sbjct: 232 FKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDG 291
Query: 125 LGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPD 184
L + AL+ L +K +G P+++ + L+ G S+ GN EM ++G P
Sbjct: 292 LCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPS 351
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V YT+++ +++ + ++EKA ++F M G +P+ TY +I G C+ G EA + K
Sbjct: 352 KVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYK 411
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M PN ++YNT+++ +A + + MV+ G
Sbjct: 412 SMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNG 452
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 111/254 (43%), Gaps = 6/254 (2%)
Query: 3 ENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIR 59
+ G A T+NILI C G+V A ++ER ++ + P ++N ++ L
Sbjct: 240 KRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHI---NPTTRTFNMLMDGLCNTG 296
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
Q +++ G P ++TYNI++ ++G L+ EM G SP TY
Sbjct: 297 QLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYT 356
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
IL++ + D A + + MK +G P + L+ GL GN+ + M
Sbjct: 357 ILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEM 416
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
P+ V Y MI Y KA + M+ G PNV +Y S I+ C GK EA
Sbjct: 417 HLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEA 476
Query: 240 CTMMKEMESRGCNP 253
++KEM G P
Sbjct: 477 KRLLKEMTEAGLKP 490
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
QM G +P++ Y I++ A R G +DQ + M G + + + Y I+++ K
Sbjct: 132 QMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKG 191
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
L MK VG P++ + +L+ R G L FDE++ +G + V Y
Sbjct: 192 YKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYN 251
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++I G++ KA+ L + M P T+N ++ G C G+ D+A + +++++
Sbjct: 252 ILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLI 311
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G P + YN L+S G + E++R M ++G
Sbjct: 312 GLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRG 347
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 117/237 (49%), Gaps = 9/237 (3%)
Query: 49 NAILHALLGIRQYKLIEWV---YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDE 105
+A+++A L Q +L+E ++ M +G++P ++N + + G LD+ E
Sbjct: 42 DAVINASL---QSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTE 98
Query: 106 -MGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
+GR+ F D +++ I + + LL M+ +G P+V +T L++ R G
Sbjct: 99 YLGRTQF--DVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNG 156
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
++D K F M + G + YT+MI + G + +L+ M G LPN++TYN
Sbjct: 157 DIDQAKVMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYN 216
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
S+I +C GK A + E+ RG N + YN L+ L G++++A ++ M
Sbjct: 217 SLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERM 273
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 34/175 (19%)
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDE----------------------------- 175
G PS F +D L+++GNLD FF E
Sbjct: 68 GHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRTQFDVYSFWITIKAFCENGNVSKGF 127
Query: 176 -----MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
M G P+V YT++I + G++++A+ +F M G N + Y MI GF
Sbjct: 128 ELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGF 187
Query: 231 CMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G + + ++M+ G PN YN+L++ GKL+ A +V + ++G
Sbjct: 188 FKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 141/305 (46%), Gaps = 37/305 (12%)
Query: 16 LICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEG 75
L+ G + K + F ++K +P ++YN+++ L+ Q++ + VY +M +EG
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 76 YA-PDILTYNIVMCAKYRLGKLDQFHRLLD------------------------------ 104
PD +TY+ ++ + +LG+ D RL D
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 105 -----EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
EM R+G SP +TY L+ LGK + A +L +M G P V+ LM+
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNI 347
Query: 160 LSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS-YIAAGELEKAQDLFDGMITKGQLP 218
L + G L+ F+EM C P VV Y +I + + + + + FD M G P
Sbjct: 348 LGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSP 407
Query: 219 NVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVI 278
+ FTY+ +I G+C + ++A +++EM+ +G P Y +L++ L A + A+E+
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 279 RHMVE 283
+ + E
Sbjct: 468 KELKE 472
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 135/287 (47%), Gaps = 3/287 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G N L+ G+VG ++ F + + P SYN ++ AL +
Sbjct: 329 MLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKA 388
Query: 61 --YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
++ W + +M +G +P TY+I++ + ++++ LL+EM GF P Y
Sbjct: 389 PVSEVSSW-FDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAY 447
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L++ LGK + AA L +KE + S + ++ + G L F+EM N
Sbjct: 448 CSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKN 507
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+G PDV Y +++ + AG + +A L M G ++ ++N ++ GF G
Sbjct: 508 QGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRR 567
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A M + M+ G P+ + YNTL+ +AG EA ++R M +KG
Sbjct: 568 AIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKG 614
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 136/316 (43%), Gaps = 37/316 (11%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP T T++ LI + ++G + F + K +P + Y +L + + +
Sbjct: 230 FPDTI-TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 66 WVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
++++M G +P + TY ++ + G++++ + L M G +PD N L+++L
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNIL 348
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL-SRAGNLDACKYFFDEMANKGCMPD 184
GK + N+ N M P+V+ + T++ L + +FD+M G P
Sbjct: 349 GKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPS 408
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP-------------------------- 218
Y+++I Y +EKA L + M KG P
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468
Query: 219 -------NVFT--YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAG 269
NV + Y MI+ F GK EA + EM+++G P+ YN L+S + AG
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 270 KLAEAHEVIRHMVEKG 285
+ EA+ ++R M E G
Sbjct: 529 MVNEANSLLRKMEENG 544
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 2/190 (1%)
Query: 98 QFHRLLDEMGRSGF-SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTL 156
+ +R + E+ R+ + S + L+ LG+ AL++ K P+ + ++
Sbjct: 144 EMYRTIQEVVRNTYVSVGPVVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSV 203
Query: 157 MDGLSRAGNLDACKYFFDEMANKG-CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
+ L + G + + EM N+G C PD + Y+ +I+SY G + A LFD M
Sbjct: 204 ILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNC 263
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
P Y +++ + GK ++A + +EM+ GC+P Y L+ L AG++ EA+
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAY 323
Query: 276 EVIRHMVEKG 285
++ ++M+ G
Sbjct: 324 DLYKNMLTDG 333
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 3/165 (1%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
EN ++R + ++I G+ G + V+ F + K P +YNA++ ++
Sbjct: 472 ENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVN 531
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ ++M + G DI ++NI++ R G + + + M G PD TYN LL
Sbjct: 532 EANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLL 591
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
A L+ MK+ GF+ + +++++D + GN+D
Sbjct: 592 GCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAV---GNMD 633
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ENG + NI++ G+ R+ +E F K +P +YN +L
Sbjct: 540 MEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGM 599
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQ 98
++ + ++M D+G+ D +TY+ ++ A +G +D
Sbjct: 600 FEEAARLMREMKDKGFEYDAITYSSILDA---VGNMDH 634
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 130/276 (47%), Gaps = 2/276 (0%)
Query: 11 RTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQ 70
R++N L+ E KV F + P +YN ++ ++++
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNW 174
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M EG+ PD+ +Y+ V+ + GKLD L DEM +PD YNIL+ K
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKD 234
Query: 131 PLAALNLLNH-MKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
A+ L + +++ P+V ++ GLS+ G +D C +D M D+ Y+
Sbjct: 235 HKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYS 294
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+I G ++KA+ +F+ ++ + +V TYN+M+ GFC GK E+ + + ME R
Sbjct: 295 SLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQR 354
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ N + YN L+ L GK+ EA + R M KG
Sbjct: 355 N-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKG 389
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 67 VYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVL 125
V+++M + G P I +YN ++ A + + L +G +P+ TYN+L+ +
Sbjct: 100 VFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K + A LN M + GF P V ++T+++ L++ G LD FDEM+ + PDV
Sbjct: 160 CKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVAPDV 219
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMK 244
CY ++I ++ + + A L+D ++ + PNV T+N MI G G+ D+ +
Sbjct: 220 TCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWD 279
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ + Y++L+ L + G + +A V +VE+ +I +V+
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVT 327
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 100/219 (45%)
Query: 49 NAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGR 108
NA++ L+ + + + M G P +++YNI++C GK + + EM
Sbjct: 468 NALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE 527
Query: 109 SGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA 168
+G PD TY+ILL L + K AL L + + G +P V+ L+ GL G LD
Sbjct: 528 NGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDD 587
Query: 169 CKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIR 228
M ++ C ++V Y ++ Y + +A ++ M G P++ +YN++++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILK 647
Query: 229 GFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRN 267
G C+ + A + + G P +N LV + N
Sbjct: 648 GLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAVVN 686
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 96/196 (48%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V Q++ +G D+ Y ++ + +L++ L+ EM + G + H N L+ L
Sbjct: 416 VMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ + A L+ M + G P+V+ + L+ GL AG F EM G PD+
Sbjct: 476 RDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLK 535
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y++++ ++E A +L+ + G P+V +N +I G C GK D+A T+M M
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 247 ESRGCNPNFLVYNTLV 262
E R C N + YNTL+
Sbjct: 596 EHRNCTANLVTYNTLM 611
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 127/286 (44%), Gaps = 11/286 (3%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKN--SYNAILHALLGIRQYKLIEW 66
T+N ++ C CG K+ E ++ R N SYN ++ LL +
Sbjct: 327 TYNTMLGGFCRCG------KIKESLELWRIMEQRNSVNIVSYNILIKGLLENGKIDEATM 380
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
+++ M +GYA D TY I + G +++ ++ E+ G D + Y ++ L
Sbjct: 381 IWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLC 440
Query: 127 KGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
K + A NL+ M + G + + L+ GL R L M GC+P VV
Sbjct: 441 KKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVV 500
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y ++I AG+ +A M+ G P++ TY+ ++ G C K + A + +
Sbjct: 501 SYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQF 560
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G P+ +++N L+ L + GKL +A V+ +M + +LV+
Sbjct: 561 LQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVT 606
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 6/268 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ T+ I I C G V A V++ ++SK + + +Y +I+ L
Sbjct: 385 MPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQE-VESKGGHLDVY--AYASIIDCLCK 441
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + + ++MS G + N ++ R +L L+ MG++G P +
Sbjct: 442 KRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVS 501
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNIL+ L + K A + M E G P + ++ L+ GL R ++ + +
Sbjct: 502 YNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFL 561
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G PDV+ + ++I + G+L+ A + M + N+ TYN+++ G+ +
Sbjct: 562 QSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSN 621
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNL 265
A + M G P+ + YNT++ L
Sbjct: 622 RATVIWGYMYKMGLQPDIISYNTILKGL 649
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFN-FRPFKNSYNAILHALLGIR 59
M +NG T ++NILIC E G + F+K L N +P +Y+ +L L R
Sbjct: 490 MGKNGCLPTVVSYNILICGLCEAGKFGEA-SAFVKEMLENGLKPDLKTYSILLGGLCRDR 548
Query: 60 QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +L ++ Q G PD++ +NI++ +GKLD ++ M + + TYN
Sbjct: 549 KIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
L+ K A + +M ++G P ++ + T++ GL + FFD+ N
Sbjct: 609 TLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNH 668
Query: 180 GCMPDVVCYTVMITSYI 196
G P V + +++ + +
Sbjct: 669 GIFPTVYTWNILVRAVV 685
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRL 102
P SYN ++ L ++ ++M + G PD+ TY+I++ R K++ L
Sbjct: 497 PTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALEL 556
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
+ +SG PD +NIL+H L K A+ ++ +M+ +++ + TLM+G +
Sbjct: 557 WHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFK 616
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
+ + + M G PD++ Y ++ + A + FD G P V+T
Sbjct: 617 VRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYT 676
Query: 223 YNSMIRG 229
+N ++R
Sbjct: 677 WNILVRA 683
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 145/310 (46%), Gaps = 18/310 (5%)
Query: 1 MIENGF--PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
M ++G+ P ++N++I + G K F + F P +YN+++ L
Sbjct: 128 MADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKA 187
Query: 59 RQYKLIEWVYQQMSDEG----------------YAPDILTYNIVMCAKYRLGKLDQFHRL 102
+ E V QQM D+G PD++TY++++ ++G+ + +
Sbjct: 188 QAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNI 247
Query: 103 LDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR 162
D M R G +PD +TY LLH + +LL M + G F L+ ++
Sbjct: 248 FDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAK 307
Query: 163 AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFT 222
LD F EM KG P+VV YT +I AG +E A F M+++G P++ T
Sbjct: 308 NETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIIT 367
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
+ S+I G C G++ + + EM +RG +PN + NT++ +L G++ EAH+ ++
Sbjct: 368 FTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQII 427
Query: 283 EKGKYIHLVS 292
G +VS
Sbjct: 428 HVGVKPDVVS 437
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 143/335 (42%), Gaps = 51/335 (15%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVER-FIKSKLFN------------FRPF 44
M+ GFP T+N +I C + A V+++ F K +L +P
Sbjct: 165 MLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPD 224
Query: 45 KNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+Y+ ++ I + ++ M G PD TY ++ G L H LL
Sbjct: 225 VVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLA 284
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
M + G + H +NIL+ K + A+ M++ GF P+V+ +TT++D L +AG
Sbjct: 285 LMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAG 344
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK--------------------- 203
++ F +M ++G PD++ +T +I GE +K
Sbjct: 345 RVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLN 404
Query: 204 --------------AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
A D FD +I G P+V +Y +I G+C+ GK DE+ ++ M S
Sbjct: 405 TIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
G P+ + Y+ L++ G++ +A + R M K
Sbjct: 465 GLRPDNVTYSALLNGYCKNGRVDDALALYREMFSK 499
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 128/285 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + GF T+ +I + G V F + P ++ +++H L I +
Sbjct: 321 MRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGE 380
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+K +E + +M + G P+ + N +M + + G++ + H D++ G PD +Y I
Sbjct: 381 WKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTI 440
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ K ++ LL M +G P + ++ L++G + G +D + EM +K
Sbjct: 441 LIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKD 500
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+ + Y +++ AG + A++ + ++ G + TYN ++ G C DEA
Sbjct: 501 VKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEAL 560
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M + + S+ +N ++ L G++ +A + ++ G
Sbjct: 561 RMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSG 605
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 10/290 (3%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ G TF LI CT GE K+ I + P N I+ +L
Sbjct: 356 MVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGI---HPNAIFLNTIMDSL-- 410
Query: 58 IRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDF 115
++ +++E + Q+ G PD+++Y I++ GK+D+ +LL M G PD
Sbjct: 411 CKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDN 470
Query: 116 HTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE 175
TY+ LL+ K + AL L M P+ + + ++ GL AG + A + F+ +
Sbjct: 471 VTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMK 530
Query: 176 MANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGK 235
+ + G + Y +++ +++A +F G+ +K V T+N MI G G+
Sbjct: 531 IVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGR 590
Query: 236 FDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ + G P+ ++Y ++ + G L E+ E+ M + G
Sbjct: 591 IGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNG 640
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 115/252 (45%), Gaps = 6/252 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
+I G ++ ILI C G++ + K++ R + RP +Y+A+L+
Sbjct: 426 IIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVS---IGLRPDNVTYSALLNGYCK 482
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ +Y++M + P+ +TYNI++ + G++ ++ SG +T
Sbjct: 483 NGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINT 542
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YNI+L L + AL + ++ F V F ++ GL + G + K F +
Sbjct: 543 YNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAIL 602
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
G +PD + Y +MI S+I G LE++ +LF M G N T N+++R G
Sbjct: 603 PSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVR 662
Query: 238 EACTMMKEMESR 249
A T + +++ +
Sbjct: 663 RAGTYLTKIDEK 674
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 105/239 (43%), Gaps = 38/239 (15%)
Query: 86 VMCAKYRLGKL--DQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLA-------ALN 136
++ ++R G L + L DE+ S H +N +L V+ GD + A++
Sbjct: 18 IIVEQHRSGSLGLEDALNLFDELLPRARSASVHAFNRVLTVVAHGDSSSSQRHGAALAVS 77
Query: 137 LLNHMKEVGFD---PSVLHFTTLMDGLSRAGNLD--------ACKYFFDEMANKG--CMP 183
L N M +VG + F L+ G LD + MA+ G C P
Sbjct: 78 LFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPP 137
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMA---------- 233
+V+ Y ++I GE++KA LF M+ +G PN+ TYNS+I G C A
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197
Query: 234 ------GKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
G+ +EA ++K+M G P+ + Y+ L+ G+ EA + MV +G+
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%)
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+M G PD +TY+ ++ + G++D L EM P+ TYNI+LH L
Sbjct: 460 RMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAG 519
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ +AA + + G + + ++ GL +D F + +K +V +
Sbjct: 520 RVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFN 579
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
+MI + G + A+ LF ++ G +P+ Y MI+ G +E+ + ME
Sbjct: 580 IMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKN 639
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
GC N N +V L G + A + + EK
Sbjct: 640 GCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEK 674
>gi|449438016|ref|XP_004136786.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g41720-like [Cucumis sativus]
Length = 707
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 147/286 (51%), Gaps = 8/286 (2%)
Query: 12 TFNILICTCGEVG---LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
T+N LI G G A ++E +++ + P ++++N +++A ++ V
Sbjct: 67 TYNALINAHGRAGQWRWATNIMEDMLRAAI---PPSRSTFNNLINACGSCGNWREALRVC 123
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
++M+D G PD++T+NIV+ A + + + M + PD T NI++H L K
Sbjct: 124 KKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKV 183
Query: 129 DKPLAALNLLNHMKEVGFD--PSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVV 186
+ A+ + + M+E + P V+ FT+++ S G ++ CK F M +G P++V
Sbjct: 184 KQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIV 243
Query: 187 CYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEM 246
Y +I++Y + G ++A +FD M G P+V +Y S+I F + + A + M
Sbjct: 244 SYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMM 303
Query: 247 ESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ C PN + YN L+ + G L +A +++R M + G + ++VS
Sbjct: 304 KRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVS 349
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 136/324 (41%), Gaps = 40/324 (12%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERF--IKSKLFNFRPFKNSYNAILHALLGIR-QYKL 63
P T T NI+I +V + +E F ++ K RP ++ +I+H L +R Q +
Sbjct: 168 PDTT-TLNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIH-LYSVRGQIED 225
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+ V+ M EG P+I++YN ++ A G + + DEM RSGF PD +Y L+
Sbjct: 226 CKAVFSTMLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLIS 285
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
G+ +P A + + MK P+++ + LMD G L EM G P
Sbjct: 286 TFGRSQQPARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHP 345
Query: 184 DVVCYTVM-----------------------------------ITSYIAAGELEKAQDLF 208
+VV + I SY+ GE EKA +L+
Sbjct: 346 NVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLY 405
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M K P+ T+ +I G C K++EA KEM + +Y++++
Sbjct: 406 RSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQ 465
Query: 269 GKLAEAHEVIRHMVEKGKYIHLVS 292
G+L +A + + G LV+
Sbjct: 466 GQLVKAESLFNSLKGSGCCPDLVT 489
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 117/262 (44%), Gaps = 2/262 (0%)
Query: 33 FIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYR 92
F + + + +P +YNA+++A Q++ + + M P T+N ++ A
Sbjct: 53 FFEMQKWRCKPDVETYNALINAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGS 112
Query: 93 LGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLH 152
G + R+ +M +G PD T+NI+L G + AL+ MK P
Sbjct: 113 CGNWREALRVCKKMTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTT 172
Query: 153 FTTLMDGLSRAGNLDACKYFFDEMANK--GCMPDVVCYTVMITSYIAAGELEKAQDLFDG 210
++ L + F M K C PDVV +T +I Y G++E + +F
Sbjct: 173 LNIVIHCLIKVKQYGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFST 232
Query: 211 MITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGK 270
M+ +G PN+ +YN++I + G EA ++ EM+ G P+ + Y +L+S + +
Sbjct: 233 MLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQ 292
Query: 271 LAEAHEVIRHMVEKGKYIHLVS 292
A A EV M +LVS
Sbjct: 293 PARAREVFDMMKRNKCKPNLVS 314
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 126/286 (44%), Gaps = 2/286 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M +NG T NI++ K + F K N RP + N ++H L+ ++Q
Sbjct: 126 MTDNGVGPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQ 185
Query: 61 YKLIEWVYQQMSDEGYA--PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
Y ++ M ++ PD++T+ ++ G+++ + M G P+ +Y
Sbjct: 186 YGQAIEIFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSY 245
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
N L+ A ++ + MK GF P V+ +T+L+ R+ + FD M
Sbjct: 246 NALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQPARAREVFDMMKR 305
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
C P++V Y ++ +Y + G L +A D+ M G PNV + +++ G+
Sbjct: 306 NKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICTLLAACGRFGQKVN 365
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+++ E RG + N + N+ + + N G+ +A + R M K
Sbjct: 366 IDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENK 411
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 124/320 (38%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G ++N LI G+ ++ F + K F P SY +++ +Q
Sbjct: 233 MLAEGIKPNIVSYNALISAYASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQ 292
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V+ M P++++YN +M A G L Q +L EM + G P+ +
Sbjct: 293 PARAREVFDMMKRNKCKPNLVSYNALMDAYGSNGYLPQAVDILREMEQDGIHPNVVSICT 352
Query: 121 LLHVLGKGDKPL-----------------------------------AALNLLNHMKEVG 145
LL G+ + + A+NL M+
Sbjct: 353 LLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGEYEKAINLYRSMENKT 412
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P + FT L+ G R + FF EM + Y+ MI +Y G+L KA+
Sbjct: 413 TKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSSMICAYSKQGQLVKAE 472
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
LF+ + G P++ TY +MI + + +++ C + +EME+ + + + L+
Sbjct: 473 SLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAF 532
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+ + + M EKG
Sbjct: 533 NKGNQASNVLILAEIMKEKG 552
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 110/281 (39%), Gaps = 46/281 (16%)
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
++ +W+ Q Y YN+++ R ++DQ L EM + PD TYN L
Sbjct: 15 QVFDWMKNQ---RNYCARNDIYNMMIRLHARHNRIDQARGLFFEMQKWRCKPDVETYNAL 71
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ G+ + A N++ M PS F L++ GN +M + G
Sbjct: 72 INAHGRAGQWRWATNIMEDMLRAAIPPSRSTFNNLINACGSCGNWREALRVCKKMTDNGV 131
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITK----------------------GQL-- 217
PD+V + +++++Y + + KA F+ M GQ
Sbjct: 132 GPDLVTHNIVLSAYKSGAQYSKALSYFELMKGTNIRPDTTTLNIVIHCLIKVKQYGQAIE 191
Query: 218 -------------PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
P+V T+ S+I + + G+ ++ + M + G PN + YN L+S
Sbjct: 192 IFSSMREKRSECRPDVVTFTSIIHLYSVRGQIEDCKAVFSTMLAEGIKPNIVSYNALISA 251
Query: 265 LRNAGKLAEAHEVIRHMVEKG------KYIHLVSKFKRYKR 299
+ G EA V M G Y L+S F R ++
Sbjct: 252 YASHGMDKEAFSVFDEMKRSGFCPDVVSYTSLISTFGRSQQ 292
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/320 (18%), Positives = 119/320 (37%), Gaps = 35/320 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G + L+ CG G + ++L + N+ + + + I +
Sbjct: 338 MEQDGIHPNVVSICTLLAACGRFGQKVNIDSVLSAAELRGIHLNTIACNSAIGSYMNIGE 397
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVM--------------------------------- 87
Y+ +Y+ M ++ PD +T+ I++
Sbjct: 398 YEKAINLYRSMENKTTKPDSVTFTILISGCCRMSKYEEALCFFKEMLDLRIPLSSEIYSS 457
Query: 88 --CAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
CA + G+L + L + + SG PD TY +++ + L M+
Sbjct: 458 MICAYSKQGQLVKAESLFNSLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANN 517
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
+ + LM ++ + M KG + + M+++ + KA
Sbjct: 518 IQLDSIACSALMKAFNKGNQASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKAT 577
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
DL + M L ++ T N +++ +GK + + + G + N Y+ L+ NL
Sbjct: 578 DLINLMEPSFHLVSLGTINHLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNL 637
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
+AGK + EV++ M + G
Sbjct: 638 LSAGKWRKYIEVLQWMNDAG 657
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 116/283 (40%), Gaps = 5/283 (1%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFR-PFKNS-YNAILHALLGIRQYKLIEWVYQ 69
TF ILI C + + + F ++ + R P + Y++++ A Q E ++
Sbjct: 419 TFTILISGCCRMSKYEEALCFF--KEMLDLRIPLSSEIYSSMICAYSKQGQLVKAESLFN 476
Query: 70 QMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGD 129
+ G PD++TY ++ A ++ L EM + D + L+ KG+
Sbjct: 477 SLKGSGCCPDLVTYTAMINAYSASEMWEKVCALYQEMEANNIQLDSIACSALMKAFNKGN 536
Query: 130 KPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYT 189
+ L L MKE G + +F ++ S + + M + +
Sbjct: 537 QASNVLILAEIMKEKGIPFNDANFFEMLSACSILRDWRKATDLINLMEPSFHLVSLGTIN 596
Query: 190 VMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESR 249
++ +G+ E LF + G N+ TY+ +++ AGK+ + +++ M
Sbjct: 597 HLLQFLGKSGKTEIMIKLFYRFVALGSSVNINTYSILLKNLLSAGKWRKYIEVLQWMNDA 656
Query: 250 GCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G P+ +YN ++ ++ G AE VI+ V I L+S
Sbjct: 657 GIQPSHAMYNNILFFAQHCGD-AEYAAVIKERVGMRLCISLIS 698
>gi|302768589|ref|XP_002967714.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
gi|300164452|gb|EFJ31061.1| hypothetical protein SELMODRAFT_63558 [Selaginella moellendorffii]
Length = 384
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 127/274 (46%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+ LI G + + F + K P +YNA++ +K +Y +M
Sbjct: 90 TYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEM 149
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G A D+ TYNI + + G L+ RLLDEM G PD TYN LL V K
Sbjct: 150 DGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYF 209
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
+ A +L M E G+ P++ + ++ + ++ F+ + +KG +P++V Y+ M
Sbjct: 210 VKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAM 269
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
++ Y G +A L+D MI G +P + Y+ +I + G + EA ++M G
Sbjct: 270 LSLYGRHGLYTEAAKLWDEMIEAGCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGI 329
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P+ +Y L+ AG+ EA + M ++G
Sbjct: 330 VPDTKIYTALMDAYGKAGRCREAELLYFEMTKEG 363
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M + G + T+N LI G GL ++ +E + + ++YN I A+ G R
Sbjct: 114 MKDKGESPNSWTYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYN-IAIAMYGKRG 172
Query: 61 Y-KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYN 119
+ +E + +M +G PD +TYN ++ + + H +L EM +G+ P+ TYN
Sbjct: 173 LLEDMERLLDEMDTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYN 232
Query: 120 ILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
I+L K A L ++K G P+++ ++ ++ R G +DEM
Sbjct: 233 IMLSSARKEQSVAEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEA 292
Query: 180 GCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEA 239
GC+P ++ Y+ +I SY G ++A F M G +P+ Y +++ + AG+ EA
Sbjct: 293 GCIPCIIAYSGLIESYGHHGMYQEALACFQDMRKSGIVPDTKIYTALMDAYGKAGRCREA 352
Query: 240 CTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ EM G P+ + Y LV NAG+L
Sbjct: 353 ELLYFEMTKEGFVPDGITYGILVRAFANAGRL 384
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 5/249 (2%)
Query: 47 SYNAILHALLGIRQYKLIEW---VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL 103
+Y I+H L RQ ++ + + M + G PD + YN ++ G+L+ ++L
Sbjct: 19 TYTVIIHGYL--RQKSKLDHALRLLEVMKESGKKPDEILYNCLVNGLVNSGRLEAAEKIL 76
Query: 104 DEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRA 163
D+M R S + TY L+ + L MK+ G P+ + L+ G R
Sbjct: 77 DDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSWTYNALIQGYGRK 136
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTY 223
G +DEM GC DV Y + I Y G LE + L D M TKG P+ TY
Sbjct: 137 GLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEMDTKGVPPDQVTY 196
Query: 224 NSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVE 283
N+++ + F +A +++EM G PN YN ++S+ R +AEA ++ ++
Sbjct: 197 NTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSVAEATQLFENLKS 256
Query: 284 KGKYIHLVS 292
KG ++V+
Sbjct: 257 KGVVPNIVT 265
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 130/289 (44%), Gaps = 7/289 (2%)
Query: 1 MIENGFPTTARTFNILIC----TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL 56
M+++G T T+ ++I ++ A +++E +S +P + YN +++ L+
Sbjct: 8 MMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKES---GKKPDEILYNCLVNGLV 64
Query: 57 GIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFH 116
+ + E + M + + +++TY ++ G+L +L EM G SP+
Sbjct: 65 NSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGESPNSW 124
Query: 117 TYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM 176
TYN L+ G+ AL L + M VG V + + + G L+ + DEM
Sbjct: 125 TYNALIQGYGRKGLFKEALELYDEMDGVGCAKDVHTYNIAIAMYGKRGLLEDMERLLDEM 184
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKF 236
KG PD V Y ++ Y KA ++ M G PN++TYN M+
Sbjct: 185 DTKGVPPDQVTYNTLLDVYAKKSYFVKAHEILREMTEAGYRPNIWTYNIMLSSARKEQSV 244
Query: 237 DEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EA + + ++S+G PN + Y+ ++S G EA ++ M+E G
Sbjct: 245 AEATQLFENLKSKGVVPNIVTYSAMLSLYGRHGLYTEAAKLWDEMIEAG 293
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 2/120 (1%)
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYI-AAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
AC F+ M GC VV YTV+I Y+ +L+ A L + M G+ P+ YN +
Sbjct: 1 ACSLFY-RMMKDGCEATVVTYTVIIHGYLRQKSKLDHALRLLEVMKESGKKPDEILYNCL 59
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ G +G+ + A ++ +M+ + N + Y L+ N G+L + ++ + M +KG+
Sbjct: 60 VNGLVNSGRLEAAEKILDDMKRDKVSANLVTYTNLIKEYANTGRLQDCRKLFQEMKDKGE 119
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 134/285 (47%), Gaps = 1/285 (0%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ +G A FN ++ G + + F +L P +YN ++H LL +
Sbjct: 145 MVADGV-VAAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGR 203
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
V ++M EG P ++TY V+ R G++ ++ +EM R+G + + Y+
Sbjct: 204 AGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYST 263
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
++ K + AL + M P+V+ ++ ++ GL+ G + + F EM +
Sbjct: 264 VITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSK 323
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
C P+++ Y MI Y G+ +A +++ MI G +PN +Y+ +I G C G+ +A
Sbjct: 324 CAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAM 383
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ K M RGC P+ + Y +++ L +G + + M+ G
Sbjct: 384 MVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASG 428
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 50/323 (15%)
Query: 9 TARTFNILI-CTCGEV---------GLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
T +FN+L+ C C + +A +++ I ++ P K +Y+ ++ AL
Sbjct: 75 TLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPG--WDLAPDKFTYSTVVSALADA 132
Query: 59 -RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R + V++ ++D A + +N V+ A R G + +L + M G P T
Sbjct: 133 GRVDDAVALVHEMVADGVVAAE--AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAAT 190
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSR--------------- 162
YN+L+H L + AA+ ++ M+ G P V+ + ++DGL R
Sbjct: 191 YNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEME 250
Query: 163 --------------------AGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELE 202
+G +D ++ M P+VV Y+ MI G++
Sbjct: 251 RNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMT 310
Query: 203 KAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLV 262
+A+ LF MI PN+ TY SMI+G+ G A ++ +EM GC PN + Y+ L+
Sbjct: 311 EAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILI 370
Query: 263 SNLRNAGKLAEAHEVIRHMVEKG 285
+ L N G+L +A V +HM+++G
Sbjct: 371 NGLCNVGRLKDAMMVWKHMLDRG 393
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 120/234 (51%), Gaps = 7/234 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M NG ++ +I C GE+ A KV E + S + RP Y+A++ L
Sbjct: 249 MERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPV---RPNVVLYSAMIGGLAN 305
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ E ++++M D AP+I+TY ++ +++G + + +EM +G P+ +
Sbjct: 306 FGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVS 365
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDA-CKYFFDEM 176
Y+IL++ L + A+ + HM + G P + +T+++ GL +G +D + F+D +
Sbjct: 366 YSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDML 425
Query: 177 ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
A+ PDV+ Y V++ + A +L +A DL + M+ +G P+ T N +R F
Sbjct: 426 ASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREF 479
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 121/295 (41%), Gaps = 42/295 (14%)
Query: 4 NGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
G TA T+N+L+ CG G A V+ R + + P +Y A++ L+ +
Sbjct: 182 KGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVV---PGVMTYGAVVDGLVRCGR 238
Query: 61 YKLIEWVYQQMSDEGYA-----------------------------------PDILTYNI 85
K V ++M G A P+++ Y+
Sbjct: 239 VKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSA 298
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ GK+ + L EM S +P+ TY ++ K AL++ M G
Sbjct: 299 MIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAG 358
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P+ + ++ L++GL G L + M ++GC PD + YT MI +G ++
Sbjct: 359 CMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGL 418
Query: 206 DLFDGMITKGQL-PNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYN 259
LF M+ G P+V +YN ++ G +A A ++ M +GC+P+ + N
Sbjct: 419 RLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCN 473
>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g15630, mitochondrial; Flags: Precursor
gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 627
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Query: 5 GFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N L+ G + AR ++ +KSK F+P +YN IL + +
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISE-MKSK--GFQPDMQTYNPILSWMCNEGRA 311
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
V ++M + G PD ++YNI++ G L+ DEM + G P F+TYN L
Sbjct: 312 S---EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTL 368
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
+H L +K AA L+ ++E G + + L++G + G+ DEM G
Sbjct: 369 IHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGI 428
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
P YT +I + +A +LF+ ++ KG P++ N+++ G C G D A +
Sbjct: 429 QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFS 488
Query: 242 MMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++KEM+ NP+ + YN L+ L GK EA E++ M +G
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTC---GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G + ++NILI C G++ +A + +K + P +YN ++H L
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV---PTFYTYNTLIHGLFM 374
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + E + +++ ++G D +TYNI++ + G + L DEM G P T
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y L++VL + +K A L + G P ++ TLMDG GN+D EM
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMD 494
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
PD V Y ++ G+ E+A++L M +G P+ +YN++I G+ G
Sbjct: 495 MMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTK 554
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
A + EM S G NP L YN L+ L + A E++R M +G
Sbjct: 555 HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEG 602
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 75 GYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAA 134
G P I+TYN ++ G+++ ++ EM GF PD TYN +L + + A
Sbjct: 255 GIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---A 311
Query: 135 LNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITS 194
+L MKE+G P + + L+ G S G+L+ + DEM +G +P Y +I
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 195 YIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPN 254
++E A+ L + KG + + TYN +I G+C G +A + EM + G P
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 255 FLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLV 291
Y +L+ L K EA E+ +V KG LV
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLV 468
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 3/222 (1%)
Query: 71 MSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDK 130
M ++G+ P T N ++ RL +++ +M R + +T+NI+++VL K K
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGK 240
Query: 131 PLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTV 190
A L M+ G P+++ + TL+ G S G ++ + EM +KG PD+ Y
Sbjct: 241 LKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNP 300
Query: 191 MITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRG 250
+++ G +A ++ M G +P+ +YN +IRG G + A EM +G
Sbjct: 301 ILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQG 357
Query: 251 CNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
P F YNTL+ L K+ A +IR + EKG + V+
Sbjct: 358 MVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVT 399
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 3/273 (1%)
Query: 13 FNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMS 72
F++L+ C ++ + + +E F K F P + N IL L + + + Y M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 73 DEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPL 132
++ T+NI++ + GKL + L M G P TYN L+ +
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 133 AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMI 192
A +++ MK GF P + + ++ + G EM G +PD V Y ++I
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILI 334
Query: 193 TSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCN 252
G+LE A D M+ +G +P +TYN++I G M K + A +++E+ +G
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 253 PNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ + YN L++ G +A + M+ G
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDG 427
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 107/228 (46%)
Query: 3 ENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYK 62
E G + T+NILI + G A+K + +P + +Y ++++ L + +
Sbjct: 390 EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR 449
Query: 63 LIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILL 122
+ +++++ +G PD++ N +M +G +D+ LL EM +PD TYN L+
Sbjct: 450 EADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
Query: 123 HVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM 182
L K A L+ MK G P + + TL+ G S+ G+ DEM + G
Sbjct: 510 RGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFN 569
Query: 183 PDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
P ++ Y ++ E E A++L M ++G +PN ++ S+I
Sbjct: 570 PTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 134/274 (48%), Gaps = 8/274 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALL-GIRQYKLIEWV 67
T+NI+I C C +A VV + +K F + P + +++++ G R + ++ V
Sbjct: 106 TYNIVINCLCRCSRFVIALSVVGKMMK---FGYEPDVVTVSSLINGFCQGNRVFGAVDLV 162
Query: 68 YQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
+M + D++ YN ++ + G ++ L M R G D TYN L+ L
Sbjct: 163 -SKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCC 221
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
+ A L+ M P+V+ FT L++ R G K F++EM + PDV
Sbjct: 222 SGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFT 281
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEME 247
Y MI G++++A+ + D M+TKG P+V TYN++I GFC + DE +++EM
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMS 341
Query: 248 SRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
RG + + +NT++ AG+ A E+ M
Sbjct: 342 QRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 139/288 (48%), Gaps = 37/288 (12%)
Query: 42 RPFKN--SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQF 99
RP + ++ +L + + Y L+ ++ M G D+ TYNIV+ R +
Sbjct: 64 RPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIA 123
Query: 100 HRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
++ +M + G+ PD T + L++ +G++ A++L++ M+E+ V+ + T++DG
Sbjct: 124 LSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDG 183
Query: 160 LSRAGNLDACKYFFDEMANKGC-----------------------------------MPD 184
+ G ++ F M G +P+
Sbjct: 184 FCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPN 243
Query: 185 VVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMK 244
V+ +T +I +++ G+ +A+ ++ MI + P+VFTYNSMI G CM G+ DEA ++
Sbjct: 244 VITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILD 303
Query: 245 EMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M ++GC P+ + YNTL++ ++ E +++R M ++G + V+
Sbjct: 304 LMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVT 351
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 21/294 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGE----VGLARKVVERFIKSKLFNFRPFKNSYNAILH 53
M +G T+N L+ C G L R +V R I + F N++
Sbjct: 200 MERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAF----- 254
Query: 54 ALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
+R+ K +E Y++M PD+ TYN ++ G++D+ ++LD M G
Sbjct: 255 ----VREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGC 310
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
PD TYN L++ K + L+ M + G + F T++ G +AG DA +
Sbjct: 311 FPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQE 370
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
F M ++ P++ Y++++ +EKA LF+ M ++ TYN +I G C
Sbjct: 371 IFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMC 427
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
M G ++A + + +G P+ + Y T++S +A + R M E G
Sbjct: 428 MIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 6/228 (2%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A+K E I+ + P +YN+++H L Q + + M +G PD++TYN
Sbjct: 263 AKKFYEEMIRRCI---DPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNT 319
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ + ++D+ +L+ EM + G D T+N ++ + +P AA + + M G
Sbjct: 320 LINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---G 376
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
P++ ++ L+ GL ++ F+ M D+ Y ++I G +E A
Sbjct: 377 SRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAW 436
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
DLF + KG P+V TY +MI GFC +D+A + ++M+ G P
Sbjct: 437 DLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 113/264 (42%), Gaps = 21/264 (7%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHAL--LGIRQY 61
NGF R F G V L K+ E K + YN I+ G+
Sbjct: 147 NGFCQGNRVF-------GAVDLVSKMEEMRCKLDVV-------IYNTIIDGFCKTGLVNN 192
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
L+ ++ +M +G D +TYN ++ G+ RL+ +M P+ T+ L
Sbjct: 193 ALV--LFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTAL 250
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGC 181
++ + K L A M DP V + +++ GL G +D K D M KGC
Sbjct: 251 INAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGC 310
Query: 182 MPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACT 241
PDVV Y +I + +++ L M +G + + T+N++I+G+ AG+ D A
Sbjct: 311 FPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQE 370
Query: 242 MMKEMESRGCNPNFLVYNTLVSNL 265
+ M SR PN Y+ L+ L
Sbjct: 371 IFSRMGSR---PNIRTYSILLYGL 391
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 68/152 (44%)
Query: 134 ALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMIT 193
A++L +M + PS++ F+ L+ ++++ N D F M G D+ Y ++I
Sbjct: 53 AIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVIN 112
Query: 194 SYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNP 253
A + M+ G P+V T +S+I GFC + A ++ +ME C
Sbjct: 113 CLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKL 172
Query: 254 NFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+ ++YNT++ G + A + M G
Sbjct: 173 DVVIYNTIIDGFCKTGLVNNALVLFGRMERDG 204
>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
Length = 789
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 128/268 (47%), Gaps = 3/268 (1%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
LA V R +K N P +++ ++ L K ++ +M+ G PD TY
Sbjct: 179 LALTVYTRMMK---LNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYC 235
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
+V+ R ++D +RL D+M SG PDF T N LL+ D+ A +LL ++
Sbjct: 236 VVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKD 295
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKA 204
G+ V ++ L+ GL RA + + + +M PDV YT+M+ AG++ A
Sbjct: 296 GYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDA 355
Query: 205 QDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
+L + M G +P+ YN +I+GFC G EA ++ E+ C PN Y+ L+S
Sbjct: 356 LELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISG 415
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
+ G +A E+ M + G Y V+
Sbjct: 416 MCRNGLTRDAQEIFNEMEKLGCYPSAVT 443
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 127/293 (43%), Gaps = 62/293 (21%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y+ ++ L ++Y+ ++ +Y++M ++ PD+ Y I+M GK+ LL+EM
Sbjct: 304 YSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMT 363
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFD-------PSVLHFTTLMDGL 160
SG PD YN+L+ K + LL+ + + + P+V ++ L+ G+
Sbjct: 364 ESGVVPDTVCYNVLI-------KGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGM 416
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF------------ 208
R G + F+EM GC P V + +I G+LEKA LF
Sbjct: 417 CRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLF 476
Query: 209 -------------------------DGMITK-----------GQLPNVFTYNSMIRGFCM 232
G+I K G P ++TYN ++ GFC
Sbjct: 477 LRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCK 536
Query: 233 AGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G F+ A + +EM+ +G +P+ + Y TL++ L + +A++V M + G
Sbjct: 537 LGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNG 589
Score = 107 bits (267), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 101/192 (52%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
++G D+ M +PD +TYN++L VL + + L AL + M ++ P+V
Sbjct: 138 KMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVA 197
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
F+ L+DGL ++GN+ + FDEM +G +PD Y V+I+ + ++ A LFD M
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKM 257
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
G P+ T N+++ GFCM + DEA ++++ E G + Y+ L+ L A +
Sbjct: 258 KDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317
Query: 272 AEAHEVIRHMVE 283
+ + R M+E
Sbjct: 318 EDVQLLYRKMIE 329
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 132/302 (43%), Gaps = 21/302 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M + G A T+ ++I C V A ++ F K K P + NA+L+
Sbjct: 222 MTQRGILPDAFTYCVVISGLCRSKRVDDAYRL---FDKMKDSGVGPDFVTCNALLNGFCM 278
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + + +GY D+ Y+ ++ +R + + L +M PD +
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y I++ L + K AL LLN M E G P + + L+ G G L + E++
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
C P+V Y+++I+ G AQ++F+ M G P+ T+NS+I G C G+ +
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458
Query: 238 EACTMMKEMESRGCNPNFLV--------------YNTLVSNLRNAGKLAEAHEVIRHMVE 283
+A + +ME G NP+ + +V L ++G + +A+ ++ + +
Sbjct: 459 KAHLLFYKMEI-GRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLAD 517
Query: 284 KG 285
G
Sbjct: 518 SG 519
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 115/287 (40%), Gaps = 55/287 (19%)
Query: 25 LARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYN 84
L RK++E N +P Y ++ L + + + +M++ G PD + YN
Sbjct: 323 LYRKMIED-------NVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYN 375
Query: 85 IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEV 144
+++ +G L + L E+ R P+ TY+IL+ + + A + N M+++
Sbjct: 376 VLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKL 435
Query: 145 GFDPSVLHFTTLMDGLSRAGNLDACKYFFDEM---------------------------- 176
G PS + F +L+DGL + G L+ F +M
Sbjct: 436 GCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKM 495
Query: 177 --------------------ANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQ 216
A+ G P + Y +++ + G A LF M KG
Sbjct: 496 VEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGL 555
Query: 217 LPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
P+ TY ++I G + ++A + +ME GC P+ VY T+++
Sbjct: 556 SPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMT 602
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Query: 96 LDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTT 155
L+ + + L+ + G + +L+ V K A+ M++ P V +
Sbjct: 107 LELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNM 166
Query: 156 LMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKG 215
++D L + L + M C+P+V ++++I +G ++ A LFD M +G
Sbjct: 167 ILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRG 226
Query: 216 QLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
LP+ FTY +I G C + + D+A + +M+ G P+F+ N L++ ++ EA
Sbjct: 227 ILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAF 286
Query: 276 EVIRHMVEKGKYI 288
++R + EK Y+
Sbjct: 287 SLLR-LFEKDGYV 298
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 6 FPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIE 65
FP +T++ILI GL R E F + + P ++N+++ L Q +
Sbjct: 403 FPN-VKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAH 461
Query: 66 WVYQQMSDEGYAPDIL------TYNIVMCAKYR--------LGKLDQFHRLLDEMGRSGF 111
++ +M + G P + +++ A + G + + +R+L ++ SG
Sbjct: 462 LLFYKM-EIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGD 520
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+P +TYNIL++ K A L M+ G P + + TL++GL R +
Sbjct: 521 APGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYK 580
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
FD+M GC PD Y M+T EL +A L+
Sbjct: 581 VFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLW 617
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 19/247 (7%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E+G +N+LI C G + AR + + F P +Y+ ++ +
Sbjct: 362 MTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCF---PNVKTYSILISGMCR 418
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLL--DEMGRS------ 109
+ + ++ +M G P +T+N ++ + G+L++ H L E+GR+
Sbjct: 419 NGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLR 478
Query: 110 ---GFSPDFHTYNILLHVLGKGDKPL--AALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
G S + ++ V D L A +L + + G P + + L++G + G
Sbjct: 479 LSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLG 538
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
N + F EM KG PD V Y +I + E A +FD M G P+ Y
Sbjct: 539 NFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYR 598
Query: 225 SMIRGFC 231
+M+ C
Sbjct: 599 TMMTWMC 605
>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 933
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 137/287 (47%), Gaps = 11/287 (3%)
Query: 7 PTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEW 66
P + N L+ + + L R + S RP +YN +L AL +
Sbjct: 70 PADPASLNALLYSHCRLRLLRPAIALLRSS-----RPTTVAYNILLAAL---SDHAHAPA 121
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLG 126
V +M G D +T N ++ R G++D L D G + D +N L+
Sbjct: 122 VLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR-GGGIHALDVIGWNTLIAGYC 180
Query: 127 K-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
+ GD P AAL++ + M G V+ + TL+ G RAG +DA + D M G P+V
Sbjct: 181 RVGDTP-AALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNV 239
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
YT I Y +E+A DL++GM+ G L +V T ++++ G C G+F EA + +E
Sbjct: 240 ATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFRE 299
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
M+ G PN + Y TL+ +L AG+ E ++ MV +G + LV+
Sbjct: 300 MDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVT 346
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 18/294 (6%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVV----ERFIKSKLFNFRPFKNSYNAILH 53
M G P +N L+ C G+V AR V+ E + + + PF Y
Sbjct: 195 MTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY----- 249
Query: 54 ALLGIRQYKLIEW--VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGF 111
R + E +Y+ M G D++T + ++ R G+ + + L EM + G
Sbjct: 250 ----CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGA 305
Query: 112 SPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKY 171
+P+ TY L+ L K + L+LL M G ++ +T LMD L + G D K
Sbjct: 306 APNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKD 365
Query: 172 FFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFC 231
+ P+ V YTV+I + A +++A+ + M K PNV T++S+I GF
Sbjct: 366 TLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFV 425
Query: 232 MAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
G D+A + M+ RG NPN + Y TL+ A EV M+ +G
Sbjct: 426 KRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEG 479
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 132/317 (41%), Gaps = 37/317 (11%)
Query: 5 GFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLI 64
G T+N +I + G K ++ + K+ + +P +YN ++ L G +
Sbjct: 584 GLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKA 643
Query: 65 EWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHV 124
+++ +M G++P LT+ V+ A + +LD + + M +G D YN LL V
Sbjct: 644 KYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQV 703
Query: 125 L-----------------GKGDKP----LAALNLLNHMKEVGFD---------------P 148
L G G P AL +L H K D P
Sbjct: 704 LCYHGMTRKATVVLEEMLGSGIAPDTITFNAL-ILGHCKSSHLDNAFATYAQMLHQNISP 762
Query: 149 SVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLF 208
++ F TL+ GL G + EM G P+ + Y ++ T + +A L+
Sbjct: 763 NIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLY 822
Query: 209 DGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNA 268
M+ KG +P V TYN++I F AG +A + K+M+ RG +P Y+ LVS
Sbjct: 823 CEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRI 882
Query: 269 GKLAEAHEVIRHMVEKG 285
E + ++ M EKG
Sbjct: 883 RNGTEVKKCLKDMKEKG 899
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 138/322 (42%), Gaps = 39/322 (12%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
M+ G T+ L+ G+ G +V + RF S N P +Y ++ AL
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSD--NLSPNGVTYTVLIDALCKA 392
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
E V +M ++ +P+++T++ V+ + G LD+ M G +P+ TY
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452
Query: 119 NILLHVLGKGDKPLAAL-------------------NLLNHMKE---------------- 143
L+ K AAL +L+N +++
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512
Query: 144 VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEK 203
G +++TTL+DGL +AG++ F E+ ++ +PD V Y V I G+ ++
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572
Query: 204 AQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVS 263
A+ M G P+ TYN+MI C G+ +A ++ EM+ PN + YNTLV+
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632
Query: 264 NLRNAGKLAEAHEVIRHMVEKG 285
L G + +A ++ MV G
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAG 654
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 35/252 (13%)
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
Q++ D PD + YN+ + LGK + L EM G PD TYN ++ +
Sbjct: 543 QELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRK 602
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP----- 183
+ AL LL+ MK P+++ + TL+ GL G ++ KY +EM + G P
Sbjct: 603 GETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTH 662
Query: 184 ------------------------------DVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
D+ Y ++ G KA + + M+
Sbjct: 663 RRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLG 722
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+ T+N++I G C + D A +M + +PN +NTL+ L + G++ E
Sbjct: 723 SGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGE 782
Query: 274 AHEVIRHMVEKG 285
A V+ M + G
Sbjct: 783 AGTVLIEMEKSG 794
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 125/284 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ NG T + L+ G + F + P +Y ++ +L +
Sbjct: 265 MVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGR 324
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
K + + +M G D++TY +M + GK D+ L SP+ TY +
Sbjct: 325 GKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTV 384
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ L K A +L M+E P+V+ F+++++G + G LD + M +G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
P+VV Y +I + + A +++ M+ +G N F +S++ G GK +EA
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+ K+ G + + + Y TL+ L AG + A + + ++++
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDR 548
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 105/234 (44%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
YN +L L + V ++M G APD +T+N ++ + LD +M
Sbjct: 697 YNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQML 756
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SP+ T+N LL L + A +L M++ G +P+ L + L G + N
Sbjct: 757 HQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKV 816
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
+ EM KG +P V Y +I+ + AG + +A++LF M +G P TY+ ++
Sbjct: 817 EAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHM 281
G+ E +K+M+ +G +P+ + + G +A +++++
Sbjct: 877 SGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 116/288 (40%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVE--RFIKSKLFNFRPFKNSYNAILHALLGI 58
M E TF+ +I + GL K E R +K + N P +Y ++
Sbjct: 405 MEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGIN--PNVVTYGTLIDGFFKF 462
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ VY M EG + + ++ + GK+++ L + SG S D Y
Sbjct: 463 QGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNY 522
Query: 119 NILLHVLGK-GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
L+ L K GD P A + + P + + ++ L G K F EM
Sbjct: 523 TTLIDGLFKAGDMP-TAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
N G PD Y MI S+ GE KA L M PN+ TYN+++ G G +
Sbjct: 582 NMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVE 641
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A ++ EM S G +P+ L + ++ + +L ++ M+ G
Sbjct: 642 KAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAG 689
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 82/214 (38%), Gaps = 6/214 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ +G TFN LI C + A + + N P ++N +L L
Sbjct: 720 MLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQ---NISPNIATFNTLLGGLES 776
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + V +M G P+ LTY+I+ + + RL EM GF P T
Sbjct: 777 VGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVST 836
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
YN L+ K A L M++ G P+ + L+ G SR N K +M
Sbjct: 837 YNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMK 896
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
KG P + + ++ G +AQ L +
Sbjct: 897 EKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 58/144 (40%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M ++G T++IL G+ + + + + F P ++YNA++
Sbjct: 790 MEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGM 849
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ +++ M G P TY+I++ R+ + + L +M GFSP T +
Sbjct: 850 MTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSF 909
Query: 121 LLHVLGKGDKPLAALNLLNHMKEV 144
+ K A LL ++ V
Sbjct: 910 ICRAFSKPGMTWQAQRLLKNLYRV 933
>gi|302771417|ref|XP_002969127.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
gi|300163632|gb|EFJ30243.1| hypothetical protein SELMODRAFT_61162 [Selaginella moellendorffii]
Length = 646
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 125/260 (48%), Gaps = 8/260 (3%)
Query: 47 SYNAILHALLGIR--QYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLD 104
+YN +L L G R + I+ ++Q+M D +PD TYN ++ A + + RL
Sbjct: 111 TYNVMLD-LYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQ 169
Query: 105 EMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAG 164
EM +G P+ TYN LL V GKG A LL M+ G P+++ + L+ +RAG
Sbjct: 170 EMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAG 229
Query: 165 NLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYN 224
D + +KG PD Y +I+++ A EKA + F M PN+ TYN
Sbjct: 230 LCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYN 289
Query: 225 SMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEK 284
+I + K D+ + K M+ + C P+ + +N+L+ + N G L E V R M
Sbjct: 290 ILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRA 349
Query: 285 GKYIHLVSKF----KRYKRC 300
G Y+ V F + Y RC
Sbjct: 350 G-YMPGVDTFNILIECYGRC 368
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 123/274 (44%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N +I C + ++ + F + K P + +YNA+L +K + +M
Sbjct: 147 TYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEM 206
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
G +P+I+TYN ++ A R G D+ L + G PD TY L+ + ++
Sbjct: 207 EAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERY 266
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL M++ P+++ + L+D R LD F M K C PD+V + +
Sbjct: 267 EKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSL 326
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
+ S+ G L + ++F M G +P V T+N +I + G D + + K + G
Sbjct: 327 LKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGL 386
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
P + L+++L G+ + +V + M E G
Sbjct: 387 QPTVPTFAALMASLAREGRWQQCEKVSQEMAEAG 420
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 4/263 (1%)
Query: 21 GEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM-SDEGYAPD 79
G+ A +V E K F R + +IL L Q +++ + DE Y+ D
Sbjct: 16 GKWKKALEVFEWIRKHDCFKLRGVATA--SILSVLGNHEQLPAALELFESLKQDESYSLD 73
Query: 80 ILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK-GDKPLAALNLL 138
+ Y ++ R + D+ L + M R G + TYN++L + GK GD +L
Sbjct: 74 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 133
Query: 139 NHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAA 198
MK++ P + T++ + + F EM GC P+ V Y ++ Y
Sbjct: 134 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKG 193
Query: 199 GELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVY 258
G ++A +L M G PN+ TYN +I + AG DEA + K + S+G P+ Y
Sbjct: 194 GMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTY 253
Query: 259 NTLVSNLRNAGKLAEAHEVIRHM 281
TL+S A + +A E M
Sbjct: 254 CTLISAFNRAERYEKALETFTEM 276
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 136/328 (41%), Gaps = 36/328 (10%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
++ G T+ LI K +E F + + N P +YN ++ + +
Sbjct: 241 LLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEK 300
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ V++ M ++ PD++T+N ++ + G L + + EM R+G+ P T+NI
Sbjct: 301 LDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNI 360
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ G+ ++++ + G P+V F LM L+R G C+ EMA G
Sbjct: 361 LIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAG 420
Query: 181 CMPDVVCYTVMITSYIAAG----------ELEK-AQDLFDGMITK--------------- 214
C+ +I SY +G ELEK A+ G++ K
Sbjct: 421 LQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCCMDNEA 480
Query: 215 ----------GQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN 264
G P++ +N+MI G + A +++E+ P+ + YN L+S
Sbjct: 481 QLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSM 540
Query: 265 LRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
G +A EV+ M GK +L++
Sbjct: 541 YGREGMYHKAEEVMSEMRRAGKAPNLIT 568
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 127/286 (44%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M E G T+N L+ G+ G+ ++ E ++ + P +YN ++ A
Sbjct: 171 MKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGL 230
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + + +G PD TY ++ A R + ++ EM ++ +P+ TYNI
Sbjct: 231 CDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNI 290
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ + G+ +K + + M+E P ++ + +L+ G L F EM G
Sbjct: 291 LIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAG 350
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
MP V + ++I Y G ++ + D++ G++ G P V T+ +++ G++ +
Sbjct: 351 YMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCE 410
Query: 241 TMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ +EM G + + L+ + N+G+ + + I + + K
Sbjct: 411 KVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAK 456
Score = 87.4 bits (215), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 29/300 (9%)
Query: 1 MIENGFPTTARTFNILI-C--TCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M G+ TFNILI C CG V + + + +++ L +P ++ A++ +L
Sbjct: 346 MKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGL---QPTVPTFAALMASLAR 402
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+++ E V Q+M++ G + ++ + G+ Q + +DE+ +S P
Sbjct: 403 EGRWQQCEKVSQEMAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQP---- 458
Query: 118 YNILLHVLGK------------GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGN 165
L +L K + LA LN + + G P + F ++ ++ G
Sbjct: 459 ---LSGILCKTFVLAYCKCCMDNEAQLA----LNQLYDNGHSPDIKVFNAMISMCAKRGW 511
Query: 166 LDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS 225
++ +E+ PD V Y +++ Y G KA+++ M G+ PN+ TYN+
Sbjct: 512 IERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGMYHKAEEVMSEMRRAGKAPNLITYNT 571
Query: 226 MIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
++ + G+ D+A + +M + P+ +NTLV + + G EA VI +M E G
Sbjct: 572 LLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHG 631
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 85/163 (52%), Gaps = 4/163 (2%)
Query: 70 QMSDEGYAPDILTYN--IVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGK 127
Q+ D G++PDI +N I MCAK G +++ +LL+E+ ++ PD TYN L+ + G+
Sbjct: 486 QLYDNGHSPDIKVFNAMISMCAKR--GWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGR 543
Query: 128 GDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVC 187
A +++ M+ G P+++ + TL+ ++ G +D F +M PD
Sbjct: 544 EGMYHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFT 603
Query: 188 YTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGF 230
+ ++ SY + G ++A + + M G P T+ +++ G+
Sbjct: 604 FNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGY 646
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 86/188 (45%), Gaps = 8/188 (4%)
Query: 121 LLHVLGKGDKPLAALNLLNHMKE-VGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANK 179
+L VLG ++ AAL L +K+ + V +T+L+ LSRA D F+ M +
Sbjct: 44 ILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQRE 103
Query: 180 GCMPDVVCYTVMITSYIAAGE-LEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
G + V Y VM+ Y G+ ++ Q LF M P+ +TYN+MI E
Sbjct: 104 GQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQE 163
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG------KYIHLVS 292
A + +EM+ GC PN + YN L+ G EA E++ M G Y L++
Sbjct: 164 ALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIA 223
Query: 293 KFKRYKRC 300
+ R C
Sbjct: 224 AYARAGLC 231
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 75/159 (47%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
+ +NG + FN +I C + G + V+ + + +P +YN ++
Sbjct: 487 LYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYNCLMSMYGREGM 546
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
Y E V +M G AP+++TYN ++ + + G++D R+ +M + PD T+N
Sbjct: 547 YHKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARVRPDNFTFNT 606
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDG 159
L+ AL+++ +M E G P+ + F L+DG
Sbjct: 607 LVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDG 645
>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
Length = 806
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+ NA++H L + K V Q M ++G D +TYNI++ + K+++ +L +M
Sbjct: 469 TSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDM 528
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
R GF PD T+N LLH K +LL+ MK G P ++ + T++DG +A ++
Sbjct: 529 TRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDI 588
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNS- 225
K + E+ ++G P+V Y +I Y G++ A D + M + G P TY S
Sbjct: 589 RKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSL 648
Query: 226 ----------------------------------MIRGFCMAGKFDEACTMMKEMESRGC 251
MI+G+C GK EA +EM SRG
Sbjct: 649 MYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGI 708
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+PN L Y TL+ +G EA ++ MV G
Sbjct: 709 SPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSG 742
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 122/263 (46%)
Query: 1 MIENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQ 60
M+ G + T+NI+I C + + ++ F+P ++N +LHA + +
Sbjct: 493 MLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGK 552
Query: 61 YKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNI 120
+ + QM EG PDI++Y ++ + + + L E+ G P+ YN
Sbjct: 553 MEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNA 612
Query: 121 LLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKG 180
L+ G+ A++ + MK G P+ + + +LM + AG ++ K F +
Sbjct: 613 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENN 672
Query: 181 CMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEAC 240
V+ YT+MI Y G++ +A F+ M ++G PN TY +++ + +G +EA
Sbjct: 673 VDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEAS 732
Query: 241 TMMKEMESRGCNPNFLVYNTLVS 263
+ EM G P+ + Y TL++
Sbjct: 733 KLFDEMVGSGVIPDNITYGTLIA 755
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 115/245 (46%), Gaps = 2/245 (0%)
Query: 43 PFKNSYNAILHALLGIRQYKLIEWVYQQMSDE-GYAPDILTYNIVMCAKYRLGKLDQFHR 101
P + NA L AL+ Q V+ +M + A + +Y ++ A + GK+D
Sbjct: 183 PSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFE 242
Query: 102 LLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLS 161
+L E+ R+G P TYN+L+ L K + A L M++ G PSV+ F L++GL+
Sbjct: 243 MLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLA 302
Query: 162 RAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVF 221
R EM G P+ V Y +I + G +A LFD M+ K P
Sbjct: 303 RGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAV 362
Query: 222 TYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSN-LRNAGKLAEAHEVIRH 280
TYN + + C G+ + A ++++M S G + ++NT+V+ L+ +L +
Sbjct: 363 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNE 422
Query: 281 MVEKG 285
MV +G
Sbjct: 423 MVTRG 427
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 1/224 (0%)
Query: 67 VYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRS-GFSPDFHTYNILLHVL 125
++ +S G P I T N + A R G+LD + DEM S + + ++Y ++ L
Sbjct: 172 AFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKAL 231
Query: 126 GKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDV 185
K K A +L + G P+V+ + LMD L ++G ++ M G P V
Sbjct: 232 CKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSV 291
Query: 186 VCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKE 245
V + ++I + + M G PN YN +I C G +A + E
Sbjct: 292 VTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDE 351
Query: 246 MESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIH 289
M + P + YN + L G++ A ++ M+ G +H
Sbjct: 352 MVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVH 395
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 130/327 (39%), Gaps = 42/327 (12%)
Query: 5 GFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
G T T+N+L +C G V A ++ R + + P ++ +++ L ++
Sbjct: 251 GLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM---TPSVVTFGILINGLARGERF 307
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
+ V Q+M G +P+ + YN ++ R G Q RL DEM P TYN++
Sbjct: 308 GEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLI 367
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL-SRAGNLDACKYFFDEMANKG 180
L K + A +L M +G F T++ L R L++ +EM +G
Sbjct: 368 AKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRG 427
Query: 181 CMPDVVCYTVMITSYIAAGE-----------------------------------LEKAQ 205
P+ T + G+ +++A
Sbjct: 428 MRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEAT 487
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
+ M+ KG + TYN MIRG C K +EA + +M RG P+ +NTL+
Sbjct: 488 KVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAY 547
Query: 266 RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
N GK+ E ++ M +G +VS
Sbjct: 548 CNLGKMEETFHLLDQMKTEGLQPDIVS 574
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 123/288 (42%), Gaps = 5/288 (1%)
Query: 1 MIENGFPTTARTFNIL---ICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M+ TA T+N++ +C GE+ A +++E + + N+ A L L
Sbjct: 352 MVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWL--LQR 409
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
R+ + + + +M G P+ M + GK + + + G + T
Sbjct: 410 TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLAT 469
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
N L+H L +G A ++ M G + + + ++ G + ++ +M
Sbjct: 470 SNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 529
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+G PD+ + ++ +Y G++E+ L D M T+G P++ +Y ++I G C A
Sbjct: 530 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 589
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + E+ RG PN +YN L+ G ++ A + + M G
Sbjct: 590 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNG 637
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 1/130 (0%)
Query: 164 GNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLP-NVFT 222
G+L F ++++G P + + + + AG+L+ A+++FD M + N ++
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223
Query: 223 YNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMV 282
Y +MI+ C AGK D M+ E+ G P + YN L+ L +G++ EA + M
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283
Query: 283 EKGKYIHLVS 292
+ G +V+
Sbjct: 284 QGGMTPSVVT 293
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 108/202 (53%), Gaps = 4/202 (1%)
Query: 77 APDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALN 136
+PD++ + +V+ R +LD+ +L+ R+G PD+ TYN+ + L K ++ A
Sbjct: 38 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 97
Query: 137 LLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYI 196
LL M E P+ + +T L+DGL +AG LD ++M KG P + YTV+I
Sbjct: 98 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLS 157
Query: 197 AAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC----N 252
AG +E+A+ +F M+ G P+ F Y ++I G GK DEA + +M GC
Sbjct: 158 KAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVE 217
Query: 253 PNFLVYNTLVSNLRNAGKLAEA 274
P+ +++N ++ L +G L +A
Sbjct: 218 PDVVIHNLVIRQLCASGNLEDA 239
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 124/264 (46%), Gaps = 8/264 (3%)
Query: 26 ARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNI 85
A V+ER +++ P +YN + L + + ++M ++ P +TY
Sbjct: 60 AFSVLERAVRA---GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116
Query: 86 VMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVG 145
++ + G+LD+ +L++M G SP TY +++ L K + A + M G
Sbjct: 117 LVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNG 176
Query: 146 FDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCM----PDVVCYTVMITSYIAAGEL 201
P +T L+ GL++ G LD + ++M GC PDVV + ++I A+G L
Sbjct: 177 CRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNL 236
Query: 202 EKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTL 261
E A FD + L + FT+N ++ C A + +EA +K+M R C P Y +L
Sbjct: 237 EDALAYFDELDDSLDLTH-FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSL 295
Query: 262 VSNLRNAGKLAEAHEVIRHMVEKG 285
V G+L EA ++ VE+G
Sbjct: 296 VDGFLKLGRLDEALLQLKEAVERG 319
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 92 RLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVL 151
+ G+LD+ LLDEM SPD + ++++ L + + A ++L G +P +
Sbjct: 21 KTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYV 77
Query: 152 HFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGM 211
+ +DGL +A +D +M K C+P V YT ++ + AG L++A + + M
Sbjct: 78 TYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQM 137
Query: 212 ITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKL 271
+ KG P + TY +I G AG+ +EA + +M GC P+ VY L+S L GKL
Sbjct: 138 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKL 197
Query: 272 AEAHEVIRHMVEKG 285
EA + MVE G
Sbjct: 198 DEALVYLNQMVENG 211
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 142/320 (44%), Gaps = 37/320 (11%)
Query: 2 IENGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQY 61
+E GF A T+ +I ++G + ERF + + + P +Y A++ + +
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375
Query: 62 KLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNIL 121
VY+QM G +TYNI++ + G++ + + M G TY+ L
Sbjct: 376 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 435
Query: 122 LHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDE------ 175
+ AA+ L M + G +P+++ + ++ GL RAG L ++F++
Sbjct: 436 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 495
Query: 176 ------------------------------MANKGCMPDVVCYTVMITSYIAAGELEKAQ 205
M ++G P++ Y++++ AG LE
Sbjct: 496 CPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTL 555
Query: 206 DLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNL 265
++F M+++G P+V +N++IR C+AG+ DEA + +E+E R P+ Y +L+ L
Sbjct: 556 EIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSA-PDAWSYWSLLDAL 614
Query: 266 RNAGKLAEAHEVIRHMVEKG 285
++ EA + HM +G
Sbjct: 615 SRCERMEEARLLSFHMKLQG 634
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
++N ++ AL + + ++MS+ P + TY ++ +LG+LD+ L E
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
GF PD TY ++ L K + + M+ G++P + + L+DG +A +
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+ +M G + V Y +++ AG + +A F M +G + V TY+++
Sbjct: 376 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 435
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAH 275
+ GFC G A + + M RGC PN + YN ++ L AGKLA+A+
Sbjct: 436 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 484
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 136/295 (46%), Gaps = 7/295 (2%)
Query: 2 IENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGI 58
+++ T TFN L+ C A V++ + + F P +Y +++ L +
Sbjct: 246 LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCF---PTLFTYTSLVDGFLKL 302
Query: 59 RQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTY 118
+ ++ + G+ PD +TY ++ +LG++++ EM G+ PD TY
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362
Query: 119 NILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMAN 178
L+ K A + M + G S + + ++DGL +AG + F M
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 422
Query: 179 KGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDE 238
+GC+ VV Y+ ++ + + G + A +LF M+ +G PN+ +YN +IRG C AGK +
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAK 482
Query: 239 ACTMMKEMESRGCNPNFLVYNTLVSNL-RNAGKLAEAHEVIRHMVEKGKYIHLVS 292
A +++ R P+ +N+ + L + + + E+ MV +G +L S
Sbjct: 483 AYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHS 537
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 3/132 (2%)
Query: 154 TTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMIT 213
T L++GL + G LD DEM C PD+V +TV+I L++A + + +
Sbjct: 13 TALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVLERAVR 69
Query: 214 KGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAE 273
G P+ TYN I G C A + D+A ++K+M+ + C P + Y LV L AG+L E
Sbjct: 70 AGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDE 129
Query: 274 AHEVIRHMVEKG 285
A ++ MVEKG
Sbjct: 130 AMAILEQMVEKG 141
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 12/225 (5%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M E G T T++ L+ C+ G V A ++ R + P SYN I+ L
Sbjct: 420 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDR---GCEPNLVSYNIIIRGLCR 476
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIV---MCAKYRLGKLDQFHRLLDEMGRSGFSPD 114
+ + ++++ PD+ T+N +C RL + L + M G SP+
Sbjct: 477 AGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQ--RLDTVGDGVELFESMVSQGTSPN 534
Query: 115 FHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFD 174
H+Y+IL+ + + L + + M G P V+ F TL+ L AG +D F
Sbjct: 535 LHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFR 594
Query: 175 EMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPN 219
E+ + PD Y ++ + +E+A+ L M +G P
Sbjct: 595 ELERRSA-PDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAPR 638
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 131/282 (46%), Gaps = 7/282 (2%)
Query: 4 NGFPTTARTFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKL 63
+ P+ T L+ + GL V + + P + N IL L R +L
Sbjct: 125 SALPSVVDTLLSLL---ADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSEL 181
Query: 64 IEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLH 123
+++Q+ AP++ T+NI++ + G L + LL M G SPD TYN L+
Sbjct: 182 AWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLID 237
Query: 124 VLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMP 183
GK + L+ M+ G P V+ + L++ + G ++ +F EM +G M
Sbjct: 238 GYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297
Query: 184 DVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMM 243
+VV ++ + ++ G + +A LF M KG PN TY ++ G C AG+ D+A +
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357
Query: 244 KEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
EM +G N + Y LV L GK+AEA +V R M G
Sbjct: 358 NEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAG 399
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 130/288 (45%), Gaps = 6/288 (2%)
Query: 1 MIENGFPTTARTFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLG 57
M++ G P T+ +L+ C G+V A V ++ R + Y ++H
Sbjct: 360 MVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERA---GIRANELLYTTLIHGHFV 416
Query: 58 IRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHT 117
+ + + +M D+G D+ Y ++ L KLD+ LL++M G P+
Sbjct: 417 YKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVI 476
Query: 118 YNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMA 177
Y ++ K K A+ LL M + GF P+++ + L+DGL +AG++D F++M
Sbjct: 477 YTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV 536
Query: 178 NKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFD 237
+ G P+V YT ++ G L+KA L D MI KG + S++ G G
Sbjct: 537 DLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQ 596
Query: 238 EACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+A + +M + G + Y V N + EA EV+ M+E G
Sbjct: 597 DAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENG 644
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 134/277 (48%), Gaps = 6/277 (2%)
Query: 12 TFNILI---CTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVY 68
TFNI+I C G++ AR ++ R K P +YN+++ + + +E +
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARM---KAIGCSPDVVTYNSLIDGYGKCGELEEVEKLV 252
Query: 69 QQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKG 128
+M G PD++TYN ++ + G++++ + EM R G + T++ + K
Sbjct: 253 GEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKN 312
Query: 129 DKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCY 188
A+ L M+ G P+ + +T L+DG +AG LD +EM +G +VV Y
Sbjct: 313 GMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTY 372
Query: 189 TVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMES 248
TV++ G++ +A+D+F M G N Y ++I G + + A +++ EM+
Sbjct: 373 TVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKD 432
Query: 249 RGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKG 285
+G + +Y L+ L N KL EA ++ M E G
Sbjct: 433 KGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECG 469
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 113/227 (49%)
Query: 48 YNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMG 107
Y A++ L +++ + + +M + G P+ + Y +M A ++ K + LL +M
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMM 501
Query: 108 RSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLD 167
SGF P+ TY L+ L K A++ N M ++G +P+V +T L+DGL + G LD
Sbjct: 502 DSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLD 561
Query: 168 ACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMI 227
DEM +KG D V T ++ ++ G L+ A L MI G +++ Y +
Sbjct: 562 KAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFV 621
Query: 228 RGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEA 274
GFC EA ++ EM G P+ +VYN L++ + G + EA
Sbjct: 622 WGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEA 668
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 4/215 (1%)
Query: 78 PDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNL 137
P+ T N ++ R + RL +++ +P+ T+NI++ L K A L
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLP----APNVFTFNIMIDFLCKEGDLAEARAL 216
Query: 138 LNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIA 197
L MK +G P V+ + +L+DG + G L+ + EM GC PDVV Y ++ +
Sbjct: 217 LARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCK 276
Query: 198 AGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGCNPNFLV 257
G +E+A F M +G + NV T+++ + FC G EA + +M +G PN +
Sbjct: 277 FGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVT 336
Query: 258 YNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
Y LV AG+L +A + MV++G +++V+
Sbjct: 337 YTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVT 371
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 134/281 (47%)
Query: 12 TFNILICTCGEVGLARKVVERFIKSKLFNFRPFKNSYNAILHALLGIRQYKLIEWVYQQM 71
T+N LI G+ G +V + + + RP +YNA+++ + + + +M
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM 290
Query: 72 SDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEMGRSGFSPDFHTYNILLHVLGKGDKP 131
EG +++T++ + A + G + + +L +M G P+ TY L+ K +
Sbjct: 291 KREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRL 350
Query: 132 LAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNLDACKYFFDEMANKGCMPDVVCYTVM 191
AL L N M + G +V+ +T L+DGL + G + + F M G + + YT +
Sbjct: 351 DDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTL 410
Query: 192 ITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSMIRGFCMAGKFDEACTMMKEMESRGC 251
I + E+A L M KG +V Y ++I G C K DEA +++ +M+ G
Sbjct: 411 IHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGL 470
Query: 252 NPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGKYIHLVS 292
PN ++Y ++ A K +EA +++ M++ G ++V+
Sbjct: 471 KPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVT 511
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 108/244 (44%)
Query: 47 SYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFHRLLDEM 106
+Y ++ L + E V++ M G + L Y ++ + ++ LL EM
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEM 430
Query: 107 GRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGLSRAGNL 166
G D Y L+ L K A +LLN M E G P+ + +T +MD +A
Sbjct: 431 KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKE 490
Query: 167 DACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNVFTYNSM 226
+M + G P++V Y ++ AG +++A F+ M+ G PNV Y ++
Sbjct: 491 SEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTAL 550
Query: 227 IRGFCMAGKFDEACTMMKEMESRGCNPNFLVYNTLVSNLRNAGKLAEAHEVIRHMVEKGK 286
+ G C G+ D+A ++ EM +G + + +V +L+ G L +A + M+ G
Sbjct: 551 VDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGL 610
Query: 287 YIHL 290
+ L
Sbjct: 611 QLDL 614
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 94/208 (45%)
Query: 41 FRPFKNSYNAILHALLGIRQYKLIEWVYQQMSDEGYAPDILTYNIVMCAKYRLGKLDQFH 100
+P Y I+ A R+ + Q+M D G+ P+I+TY ++ + G +D+
Sbjct: 470 LKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAI 529
Query: 101 RLLDEMGRSGFSPDFHTYNILLHVLGKGDKPLAALNLLNHMKEVGFDPSVLHFTTLMDGL 160
++M G P+ Y L+ L K + A+ LL+ M + G + T+LMDG
Sbjct: 530 SHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGH 589
Query: 161 SRAGNLDACKYFFDEMANKGCMPDVVCYTVMITSYIAAGELEKAQDLFDGMITKGQLPNV 220
+ GNL +M N G D+ YT + + +++A+++ MI G P+
Sbjct: 590 LKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDA 649
Query: 221 FTYNSMIRGFCMAGKFDEACTMMKEMES 248
YN +I G +EA + EMES
Sbjct: 650 VVYNCLINKCQKLGNMEEAAILQNEMES 677
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.140 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,722,097,091
Number of Sequences: 23463169
Number of extensions: 197411041
Number of successful extensions: 668770
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7280
Number of HSP's successfully gapped in prelim test: 4953
Number of HSP's that attempted gapping in prelim test: 518835
Number of HSP's gapped (non-prelim): 71425
length of query: 300
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 159
effective length of database: 9,050,888,538
effective search space: 1439091277542
effective search space used: 1439091277542
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 76 (33.9 bits)