Query 043973
Match_columns 124
No_of_seqs 126 out of 769
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 10:08:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043973.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/043973hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02308 endoglucanase 100.0 4.2E-47 9.1E-52 324.6 10.1 119 4-123 370-490 (492)
2 PLN02266 endoglucanase 100.0 3.7E-47 8.1E-52 325.9 9.6 120 4-124 388-509 (510)
3 PLN00119 endoglucanase 100.0 5.5E-47 1.2E-51 323.6 9.6 116 4-119 372-489 (489)
4 PLN02171 endoglucanase 100.0 2.4E-46 5.1E-51 327.2 10.1 120 4-123 377-498 (629)
5 PLN02909 Endoglucanase 100.0 5.2E-46 1.1E-50 317.4 9.8 116 4-120 368-485 (486)
6 PLN02340 endoglucanase 100.0 4.6E-46 1E-50 324.6 9.6 117 4-120 377-495 (614)
7 PLN02613 endoglucanase 100.0 1.1E-45 2.3E-50 316.3 9.4 119 4-122 362-482 (498)
8 PLN02175 endoglucanase 100.0 4.3E-45 9.3E-50 311.6 10.5 118 4-122 363-482 (484)
9 PLN02420 endoglucanase 100.0 3.6E-45 7.8E-50 314.6 9.9 118 4-121 390-509 (525)
10 PLN03009 cellulase 100.0 9.4E-45 2E-49 310.4 9.9 118 4-122 373-492 (495)
11 PLN02345 endoglucanase 100.0 5.5E-44 1.2E-48 304.0 9.7 113 4-121 347-461 (469)
12 PF00759 Glyco_hydro_9: Glycos 100.0 4.1E-37 8.9E-42 256.1 3.2 100 5-116 343-444 (444)
13 PF06052 3-HAO: 3-hydroxyanthr 27.9 26 0.00057 26.4 0.7 17 77-93 34-50 (151)
14 PF12503 CMV_1a_C: Cucumber mo 26.5 44 0.00095 22.8 1.5 13 25-37 43-55 (85)
15 cd03541 Rieske_RO_Alpha_CMO Ri 26.1 16 0.00034 25.8 -0.8 66 39-112 42-107 (118)
No 1
>PLN02308 endoglucanase
Probab=100.00 E-value=4.2e-47 Score=324.61 Aligned_cols=119 Identities=56% Similarity=0.957 Sum_probs=112.0
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+++++|++||++|||||||+||+++|||||||+|+|++||||+||||+..++|..++|.+|+ .|+++++ ||+|+|||
T Consensus 370 ~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n~P~~pHHR~as~p~~~~~~~~~~c~~~~-~~~~~~~pnp~vL~GAl 448 (492)
T PLN02308 370 ASPALLRQVAKRQVDYILGDNPLRMSYMVGYGSRFPQRIHHRGSSLPSVAAHPARIGCKEGS-RYFLSPNPNPNLLVGAV 448 (492)
T ss_pred cCHHHHHHHHHhccceeccCCCCCCceEeccCCCCCCchhhcCCCCCCcccCccccCCCCCc-cccCCCCCCcceeecee
Confidence 46789999999999999999999999999999999999999999999999999999999998 4877765 89999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcCCC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKS 123 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~ 123 (124)
|||||.+|.|.|+|.+|++|||||||||+||++||+|....+
T Consensus 449 VGGPd~~d~y~D~r~~y~~nEva~dyNA~~vg~la~l~~~~~ 490 (492)
T PLN02308 449 VGGPNVTDAFPDSRPYFQQSEPTTYINAPLVGLLAYFSAHPN 490 (492)
T ss_pred ecCCCCCCCCCccccccccCceeeehhhHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999986554
No 2
>PLN02266 endoglucanase
Probab=100.00 E-value=3.7e-47 Score=325.92 Aligned_cols=120 Identities=60% Similarity=1.035 Sum_probs=113.5
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+.+++|++||++|||||||+||+++|||||||.|+|++||||+||||++..+|..++|.+|| .|++++. ||+|+|||
T Consensus 388 ~~~~~~~~fA~~QidYiLG~NP~~~SyvVG~G~~~P~~pHHR~as~p~~~~~~~~~~C~~g~-~~~~~~~~n~~vL~GAl 466 (510)
T PLN02266 388 VTPARLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSVAAHPAKIQCSQGF-SIMNSQSPNPNVLVGAV 466 (510)
T ss_pred cCHHHHHHHHHhhhceeccCCCCCCceEEecCCCCCccccccCCCCCCcccCccccCCCCCc-cccCCCCCCcceeccee
Confidence 56789999999999999999999999999999999999999999999999999999999998 4776665 89999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcCCCC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKSG 124 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 124 (124)
||||+.+|.|.|+|.+|++|||||||||+||++||+|...+++
T Consensus 467 VGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~~yg~ 509 (510)
T PLN02266 467 VGGPDQHDRFPDERSDYEQSEPATYINAPLVGALAYLAHSYGQ 509 (510)
T ss_pred ecCCCCCCCCCccccccccCcceeecchHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999987754
No 3
>PLN00119 endoglucanase
Probab=100.00 E-value=5.5e-47 Score=323.58 Aligned_cols=116 Identities=44% Similarity=0.860 Sum_probs=110.6
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+.+++|++||++|||||||+||+++|||||||+|+|++||||+||||++.++|.+++|.+||..|++++. ||+|+|||
T Consensus 372 ~~~~~~~~fA~~QidYiLG~NP~~~SYvVGyG~n~P~~pHHR~as~~~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GAl 451 (489)
T PLN00119 372 LQASDLLQLARSQVDYILGSNPKNMSYMVGYGTNYPKKPHHRGASIVSIKKDKTPVTCSGGFDAWYNNPAPNPNVLMGAI 451 (489)
T ss_pred cCHHHHHHHHHHHHHHhcCCCCCCCceEeecCCCCCCccccccCCCCccccCCcccCCCCCccccccCCCCCcceeccee
Confidence 5678999999999999999999999999999999999999999999999999999999999977877765 89999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhh
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFA 119 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~ 119 (124)
||||+.+|.|.|+|.+|++|||||||||+||++||+|.
T Consensus 452 VGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~ 489 (489)
T PLN00119 452 VGGPDDNDVYGDERSNFQQAEPATVTVAPFVGVLAAVA 489 (489)
T ss_pred ecCCCCCCCcCccccccccCcceeecchHHHHHhhhcC
Confidence 99999999999999999999999999999999999984
No 4
>PLN02171 endoglucanase
Probab=100.00 E-value=2.4e-46 Score=327.16 Aligned_cols=120 Identities=48% Similarity=0.912 Sum_probs=114.2
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+.+++|++||++|||||||+||+++|||||||+|+|++||||+||||++..+|..++|.+||..|++++. ||+|+|||
T Consensus 377 ~~~~~y~~fA~~QidYiLG~Np~~~SYvVGyG~n~P~~pHHR~as~~~~~~~~~~~~C~~g~~~~~~~~~~np~vl~GAl 456 (629)
T PLN02171 377 AAPSQLLAFAKSQVDYILGDNPRATSYMVGYGANYPRQVHHRGSSIVSIKVDPSFVSCRGGYATWFSRKGSDPNLLTGAI 456 (629)
T ss_pred CCHHHHHHHHHHhhhhhcCCCCCCCceEeecCCCCCCCcccccccCCccccCccccCCCCccchhccCCCCCCCcccCce
Confidence 4679999999999999999999999999999999999999999999999999999999999988988876 88899999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcCCC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKS 123 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~ 123 (124)
|||||.+|.|.|+|.+|++|||||||||+||++||+|...++
T Consensus 457 VGGPd~~D~y~D~r~~y~~nEva~d~NA~~vg~lA~l~~~~~ 498 (629)
T PLN02171 457 VGGPDAYDNFADERDNYEQTEPATYNNAPLLGVLARLAGGHG 498 (629)
T ss_pred ecCCCcCCCCCccccccccCceeEecchHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999997543
No 5
>PLN02909 Endoglucanase
Probab=100.00 E-value=5.2e-46 Score=317.43 Aligned_cols=116 Identities=43% Similarity=0.719 Sum_probs=108.5
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+.+++|++||++|||||||+||+++|||||||+|+|++||||+||||+... +..++|.+||..|++++. ||+|+|||
T Consensus 368 ~~~~~y~~fA~~QidYiLG~NP~~~SYVVGfG~n~P~~pHHR~as~~~~~~-~~~~~c~~g~~~~~~~~~pn~~vL~GAl 446 (486)
T PLN02909 368 FDSTRLMAFAKQQIDYLLGANPQGRSYMVGFGPNPPKQPHHRGASVPVLPA-NTPVNCGLSFVEWFNKDRPNPNELTGAI 446 (486)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCCceEeccCCCCcCCccccccCCCCccc-CcccCCCCcccccccCCCCCcceeccce
Confidence 467899999999999999999999999999999999999999999998654 678999999977886654 89999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhc
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAG 120 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~ 120 (124)
||||+.+|.|.|+|.+|++|||||||||+||++||+|..
T Consensus 447 VGGPd~~D~y~D~r~~y~~nE~a~dyNA~~vg~lA~l~~ 485 (486)
T PLN02909 447 VGGPDRQDNFVDKRWNSSYTEPCTYINSLAVGVLAKLAA 485 (486)
T ss_pred ecCCCCCCCccccccccccCcceeecchHHHHHHHHHhc
Confidence 999999999999999999999999999999999999975
No 6
>PLN02340 endoglucanase
Probab=100.00 E-value=4.6e-46 Score=324.64 Aligned_cols=117 Identities=43% Similarity=0.811 Sum_probs=112.5
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+.+++|++||++|||||||+||+++|||||||+|+|++||||+||||++..+|.+++|.+|+..|++++. ||+|+|||
T Consensus 377 ~~~~~y~~fA~sQidYiLG~NP~~~SYVVGyG~n~P~~pHHR~as~~~~~~~~~~v~c~~g~~~~~~~~~~np~vL~GAL 456 (614)
T PLN02340 377 VQPQELLDFARSQADYILGKNPKGMSYMVGYGPKYPIHVHHRGSSIPSIFALHSTVGCVQGFDSWYRRKEADPNVIYGAL 456 (614)
T ss_pred cCHHHHHHHHHHhhHhhcCCCCCCCceEeccCCCCCCccccccccCCccccccccccCcccccccccCCCCCCCCCCCce
Confidence 4589999999999999999999999999999999999999999999999999999999999988988865 89999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhc
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAG 120 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~ 120 (124)
|||||.+|+|.|+|++|++|||||||||+||++||+|..
T Consensus 457 VGGPd~~D~y~D~r~~y~~nEvAidyNAplvg~lA~L~~ 495 (614)
T PLN02340 457 VGGPDANDNFSDDRSNYEQTEPTLSGNAPLVGLFAKLQS 495 (614)
T ss_pred eeCCCCCCCCCccccccccccceeehhHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999986
No 7
>PLN02613 endoglucanase
Probab=100.00 E-value=1.1e-45 Score=316.33 Aligned_cols=119 Identities=51% Similarity=0.913 Sum_probs=112.7
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+++++|++||++|||||||+||+++|||||||.|+|++||||+||||+++++|.++.|.+||..|+++++ ||+|+|||
T Consensus 362 ~~~~~~~~~a~~Qi~yiLG~Np~~~syvvG~G~n~P~~pHHR~as~p~~~~~~~~~~c~~g~~~~~~~~~Pnp~~l~GAl 441 (498)
T PLN02613 362 FSASQIRNFAKSQVDYILGNNPMKMSYMVGFGTKYPTQIHHRGSSIPSIQVLPEKVDCNGGFSSYYNSDTPNPNVHVGAI 441 (498)
T ss_pred cCHHHHHHHHHHhHHHhcCCCCCCCcceeccCCCCCCcccccccCCCccccCccccCCCCCccccccCCCCCCceeeeee
Confidence 4688999999999999999999999999999999999999999999999999999999999977876655 88999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcCC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGK 122 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~ 122 (124)
||||+.+|.|.|+|.+|++|||||||||+||++||+|....
T Consensus 442 VGGPd~~D~y~D~r~~y~~nEva~dyNA~~vgalA~l~~~~ 482 (498)
T PLN02613 442 VGGPDSNDQYSDKRSDYSHAEPTTYINAAFVGSVAALIKQV 482 (498)
T ss_pred ecCCCcCCCccccccccccccceeecccHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999998654
No 8
>PLN02175 endoglucanase
Probab=100.00 E-value=4.3e-45 Score=311.61 Aligned_cols=118 Identities=66% Similarity=1.129 Sum_probs=109.6
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCC--CCCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSS--NPNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~--~p~~l~Gal 81 (124)
+++++|++||++|||||||+||+++|||||||+|+|++||||+||||+...++..++|.+|+. |++++ +||+|+|||
T Consensus 363 ~~~~~~~~fA~~Q~~yiLG~np~~~syvvG~g~n~p~~pHHR~AS~p~~~~~~~~~~C~~g~~-~~~~~~pn~~vL~GAl 441 (484)
T PLN02175 363 IVPNALISLSKRQVDYILGDNPIKMSYMVGFSSNFPKRIHHRASSLPSHALRSNSLGCNGGFQ-SFYTQNPNPNILTGAI 441 (484)
T ss_pred cCHHHHHHHHHHhhhhhccCCCCCCceEeecCCCCCCCccccccCCCcccccccccCCCCCcc-cccCCCCCcceeccee
Confidence 568899999999999999999999999999999999999999999999888888899999984 54444 499999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcCC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGK 122 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~ 122 (124)
||||+.+|.|.|+|++|++|||||||||+||++||+|....
T Consensus 442 VGGPd~~D~y~D~r~dy~~nEva~dyNA~~vgalA~l~~~~ 482 (484)
T PLN02175 442 VGGPNQNDGYPDQRDDYSHAEPATYINAAFVGPLAYFAAGR 482 (484)
T ss_pred ecCCCCCCCcCccccccccCcceeecchHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999998653
No 9
>PLN02420 endoglucanase
Probab=100.00 E-value=3.6e-45 Score=314.55 Aligned_cols=118 Identities=41% Similarity=0.816 Sum_probs=111.8
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+++++|++||++|||||||+||+++|||||||.|+|++||||.||||++.+++..++|.+||++|++.+. ||+|+|||
T Consensus 390 ~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~~~~~~~~~~c~~g~~~~~~~~~pn~~vL~GAL 469 (525)
T PLN02420 390 VTPDEMLGFAKSQIDYILGSNPMETSYLVGYGPKYPTRVHHRGASIASFKEHKGFIGCTQGYDNWYGRSEPNPSVLVGAL 469 (525)
T ss_pred CCHHHHHHHHHHhhhhhccCCCCCCceEeccCCCCCCCccccccCCCccccccccccCcccccccccCCCCCcccccCce
Confidence 4578999999999999999999999999999999999999999999998888888999999988887764 89999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGG 121 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 121 (124)
||||+.+|.|.|+|.+|++|||+|||||+||++||+|...
T Consensus 470 VGGPd~~D~y~D~r~~y~~nE~~~~~nA~~vg~lA~L~~~ 509 (525)
T PLN02420 470 VGGPDCQDNFDDRRGNYVQTEACTYNTAPLVGVFARLIEL 509 (525)
T ss_pred ecCCCCCCCcccccccccccccchhhhhHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999864
No 10
>PLN03009 cellulase
Probab=100.00 E-value=9.4e-45 Score=310.38 Aligned_cols=118 Identities=53% Similarity=0.979 Sum_probs=110.7
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+.+.+|++||++|||||||+||+++|||||||+|+|++||||.|++|++.++|..+.|.+|+ .|++.+. ||+|+|||
T Consensus 373 ~~~~~y~~~A~~Q~dYiLG~Np~~~SYVvGyG~~~p~~pHHR~as~~~~~~~~~~~~c~~g~-~~~~~~~p~p~vl~GaL 451 (495)
T PLN03009 373 IGPDSLRQQAKRQVDYILGDNPMGLSYMVGYSERYPQRIHHRGSSLPSIKDHPEAIACKEGS-VYFNSSNPNPNVLVGAV 451 (495)
T ss_pred CCHHHHHHHHHHHHHHhcCCCCCCCceEecCCCCCcCchhhccccCCccccccccccCccCc-cccCCCCCCCCcccceE
Confidence 35789999999999999999999999999999999999999999999988889999999999 4887766 78999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcCC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGK 122 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~ 122 (124)
|||||.+|+|.|+|++|++|||||||||+||++||+|....
T Consensus 452 VGGP~~~d~y~D~r~~y~~NEvaidyNA~lv~~lA~l~~~~ 492 (495)
T PLN03009 452 VGGPGEDDSYEDDRDDFRKSEPTTYINAPFVGVLAYFAANP 492 (495)
T ss_pred eeCCCCCCCCCcccccccccchhhhhhHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999998643
No 11
>PLN02345 endoglucanase
Probab=100.00 E-value=5.5e-44 Score=304.04 Aligned_cols=113 Identities=42% Similarity=0.770 Sum_probs=105.2
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCC--CCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSN--PNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~--p~~l~Gal 81 (124)
+++++|++||++|||||||+||+++|||||||.|+|++||||+||||+. ..+.|.+|| .|++++. ||+|+|||
T Consensus 347 ~~~~~~~~fA~~QidYiLG~NP~~~SYvVGfG~n~P~~pHHR~As~p~~----~~~~c~~g~-~~~~~~~pn~~vL~GAl 421 (469)
T PLN02345 347 FKPSDLRKFAKSQADYILGKNPMKMSYLVGYGDKYPQYVHHRGASIPAD----AKTGCKDGF-KWLHSSEPNPNVATGAL 421 (469)
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCcceEeecCCCCCCCcccccCCCCCC----CCcCCCCCc-ccccCCCCCCceeccce
Confidence 5679999999999999999999999999999999999999999999873 467999998 5887776 89999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGG 121 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 121 (124)
||||+.+|.|.|+|.+|++|||++|+||+||++||+|+..
T Consensus 422 VGGPd~~D~y~D~r~~y~~nEva~y~nA~~vg~la~l~~~ 461 (469)
T PLN02345 422 VGGPFQNDTFVDSRDNSMQNEPTTYNSALLVGLLSSLVTT 461 (469)
T ss_pred ecCCCccCCccccccccccccceeehhhHHHHHHHHHhcC
Confidence 9999999999999999999999998899999999999853
No 12
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 9 GH9 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family E. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1RQ5_A 1CLC_A 3H7L_B 1K72_B 1G87_B 1GA2_A 1KFG_A 1UT9_A 2YIK_A 3RX5_A ....
Probab=100.00 E-value=4.1e-37 Score=256.06 Aligned_cols=100 Identities=43% Similarity=0.695 Sum_probs=73.9
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCcccc--CCCCCCCcceeee
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFF--HSSNPNILVGAIV 82 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~--~~~~p~~l~GalV 82 (124)
...+|+++|++|||||||+||+++|||||||+|+|++||||.+|. .|. +..+. ..++|++|+||||
T Consensus 343 ~~~~y~~~a~~qldyiLG~Np~~~SyV~G~G~~~p~~pHHr~~s~----------~~~--~~~~~~~~~pn~~~l~Galv 410 (444)
T PF00759_consen 343 GDQEYRDFAQSQLDYILGRNPFGQSYVTGYGENSPQHPHHRASSA----------HCS--WDDGINSPPPNPHVLYGALV 410 (444)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTT--BSBTTSSSSBBSS-B-HHCHH----------HTC--CSSTSTSSSS-SS--TT-BB
T ss_pred ChHHHHHHHHHHhhhhcCcCCCCceeeecCCCCCCCCCcCchhhc----------ccc--ccccCCCCCCCccCcccccc
Confidence 468899999999999999999999999999999999999999760 011 11122 2345899999999
Q ss_pred cCCCCCCCccccCCCcccccccccchhhHHHHHH
Q 043973 83 GGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLA 116 (124)
Q Consensus 83 GGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA 116 (124)
||||..|+|.|+|.+|++|||||||||+||++||
T Consensus 411 GGP~~~~~y~D~~~~~~~nEvaid~NA~l~~~lA 444 (444)
T PF00759_consen 411 GGPNSADSYVDDRSSYSTNEVAIDYNAPLVGALA 444 (444)
T ss_dssp S-SSTTS----STT-TTTHBBBHHHHHHHHHHHH
T ss_pred CCCCccCCccCCCcccccchHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999997
No 13
>PF06052 3-HAO: 3-hydroxyanthranilic acid dioxygenase; InterPro: IPR010329 Members of this protein family, from both bacteria and eukaryotes, are the enzyme 3-hydroxyanthranilate 3,4-dioxygenase (1.13.11.6 from EC). It is part of the kynurenine pathway for the degradation of tryptophan and the biosynthesis of nicotinic acid [].The prokaryotic homologue is involved in the 2-nitrobenzoate degradation pathway []. The enzyme acts on the tryptophan metabolite 3-hydroxyanthranilate and produces 2-amino-3-carboxymuconate semialdehyde, which can rearrange spontaneously to quinolinic acid and feed into nicotinamide biosynthesis, or undergo further enzymatic degradation.; GO: 0000334 3-hydroxyanthranilate 3,4-dioxygenase activity, 0005506 iron ion binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 1ZVF_A 1YFX_A 1YFW_A 1YFY_A 1YFU_A 2QNK_A 3FE5_A.
Probab=27.94 E-value=26 Score=26.37 Aligned_cols=17 Identities=35% Similarity=0.696 Sum_probs=10.7
Q ss_pred cceeeecCCCCCCCccc
Q 043973 77 LVGAIVGGPNQNDGFPD 93 (124)
Q Consensus 77 l~GalVGGP~~~d~y~D 93 (124)
+.=.+|||||....|..
T Consensus 34 f~VmvVGGPN~R~DyHi 50 (151)
T PF06052_consen 34 FIVMVVGGPNQRTDYHI 50 (151)
T ss_dssp EEEEEEESSB--SSEEE
T ss_pred eEEEEEcCCCCCCcccc
Confidence 44568999997665644
No 14
>PF12503 CMV_1a_C: Cucumber mosaic virus 1a protein C terminal ; InterPro: IPR022184 This domain family is found in viruses, and is approximately 90 amino acids in length. The family is found in association with PF01443 from PFAM, PF01660 from PFAM. There is a conserved GLG sequence motif. 1a protein is the major virulence factor of the (Cucumber mosaic virus. The Ns strain of CMV causes necrotic lesions to Nicotiana spp. while other strains cause systemic mosaic. The determinant of the pathogenesis of these different strains is the specific amino acid residue at the 461 residue of the 1a protein. ; GO: 0008168 methyltransferase activity, 0016817 hydrolase activity, acting on acid anhydrides
Probab=26.48 E-value=44 Score=22.84 Aligned_cols=13 Identities=38% Similarity=0.813 Sum_probs=11.4
Q ss_pred CCCCceEEeeCCC
Q 043973 25 PLKMSYMVGFGPN 37 (124)
Q Consensus 25 p~g~SyvvG~G~~ 37 (124)
|.+..|+|||-++
T Consensus 43 P~~~~Y~VGyNe~ 55 (85)
T PF12503_consen 43 PEGYEYMVGYNES 55 (85)
T ss_pred CCCeEEEeeecCC
Confidence 8899999999655
No 15
>cd03541 Rieske_RO_Alpha_CMO Rieske non-heme iron oxygenase (RO) family, Choline monooxygenase (CMO) subfamily, N-terminal Rieske domain of the oxygenase alpha subunit; ROs comprise a large class of aromatic ring-hydroxylating dioxygenases that enable microorganisms to tolerate and utilize aromatic compounds for growth. The oxygenase alpha subunit contains an N-terminal Rieske domain with an [2Fe-2S] cluster and a C-terminal catalytic domain with a mononuclear Fe(II) binding site. The Rieske [2Fe-2S] cluster accepts electrons from a reductase or ferredoxin component and transfers them to the mononuclear iron for catalysis. CMO is a novel RO found in certain plants which catalyzes the first step in betaine synthesis. CMO is not found in animals or bacteria. In these organisms, the first step in betaine synthesis is catalyzed by either the membrane-bound choline dehydrogenase (CDH) or the soluble choline oxidase (COX).
Probab=26.09 E-value=16 Score=25.76 Aligned_cols=66 Identities=12% Similarity=0.022 Sum_probs=34.7
Q ss_pred CCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecCCCCCCCccccCCCcccccccccchhhHH
Q 043973 39 SRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGGPNQNDGFPDDRSDYSHSEPATYINAAMV 112 (124)
Q Consensus 39 P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGGP~~~d~y~D~r~~y~~nEvaid~NA~lv 112 (124)
...+| |.+.+-....+-..+.|.- +.| ..-+.|-+++.|...+.-.=+++++.-.|+.++-=.+||
T Consensus 42 n~C~H-rg~~L~~g~~~~~~i~CP~--Hgw-----~f~l~G~l~~~P~~~~~~~~~~~~~~L~~~~~~~~~g~v 107 (118)
T cd03541 42 NVCTH-RASILACGSGKKSCFVCPY--HGW-----VYGLDGSLTKATQATGIQNFNPKELGLVPLKVAEWGPFV 107 (118)
T ss_pred CCCCC-CcCCccCCccccCEEEeCC--CCC-----EEcCCCeEEeCCCcccccCCCHHHCCCceEeEEEECCEE
Confidence 34454 7776543222223456653 222 334679999999764321113456666666655444443
Done!