Query 043973
Match_columns 124
No_of_seqs 126 out of 769
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 17:34:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043973.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043973hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ia6_A Cellulase CEL9M; cellul 100.0 1E-40 3.5E-45 280.2 2.9 108 5-124 325-432 (441)
2 2yik_A Endoglucanase; hydrolas 100.0 2.1E-39 7.2E-44 281.4 4.0 105 5-123 413-517 (611)
3 1tf4_A T. fusca endo/EXO-cellu 100.0 3.6E-39 1.2E-43 279.6 4.4 106 5-124 338-446 (605)
4 2xfg_A Endoglucanase 1; hydrol 100.0 1.9E-39 6.4E-44 274.4 1.9 106 5-124 360-465 (466)
5 1ks8_A Endo-B-1,4-glucanase; c 100.0 4.3E-39 1.5E-43 269.7 2.3 108 4-121 322-431 (433)
6 3gzk_A Cellulase; fold from GH 100.0 7.2E-38 2.5E-42 268.3 2.4 97 6-123 423-536 (537)
7 1g87_A Endocellulase 9G; endog 100.0 1.3E-37 4.4E-42 270.4 2.0 105 5-123 337-441 (614)
8 1ut9_A Cellulose 1,4-beta-cell 100.0 1.4E-36 4.7E-41 263.3 3.8 115 5-121 492-607 (609)
9 1clc_A Endoglucanase CELD; EC: 100.0 6.4E-35 2.2E-39 254.2 3.9 96 5-121 468-564 (639)
10 3h7l_A Endoglucanase; dehydrog 99.5 1.4E-15 4.7E-20 131.9 3.5 84 7-117 468-563 (586)
11 1ut9_A Cellulose 1,4-beta-cell 34.0 13 0.00044 31.9 1.1 15 74-88 543-557 (609)
12 3tgv_A Heme-binding protein HU 21.6 21 0.00072 24.5 0.2 21 24-44 128-148 (148)
No 1
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=1e-40 Score=280.18 Aligned_cols=108 Identities=38% Similarity=0.531 Sum_probs=94.7
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecC
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGG 84 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGG 84 (124)
.+++|++||++|||||||+||+++|||||||+|+|++||||+|+|+... ++ -...++|++|+||||||
T Consensus 325 ~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~~~----------~~--~~p~p~~~~l~GalvGG 392 (441)
T 1ia6_A 325 PDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYTYA----------NG--DNAKPAKHLLTGALVGG 392 (441)
T ss_dssp CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHHHCCCCC--------------CTTSCCSSCCTTCBCCC
T ss_pred CHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChhhccCCcc----------cc--CCCCCCcccCccceeeC
Confidence 3579999999999999999999999999999999999999999986421 01 12233488999999999
Q ss_pred CCCCCCccccCCCcccccccccchhhHHHHHHHhhcCCCC
Q 043973 85 PNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKSG 124 (124)
Q Consensus 85 P~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 124 (124)
||..|+|.|+|.+|++|||||||||+||++||+|...++|
T Consensus 393 P~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~~~~ 432 (441)
T 1ia6_A 393 PDQNDKFLDDANQYQYTEVALDYNAGLVGVLAGAIKFFGG 432 (441)
T ss_dssp CCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHHHHHHTC-
T ss_pred CCCCcCcCcccccccccccchhhhHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999887654
No 2
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=2.1e-39 Score=281.35 Aligned_cols=105 Identities=37% Similarity=0.477 Sum_probs=94.4
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecC
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGG 84 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGG 84 (124)
.+++|++||++|||||||+||+++|||||||+|+|++||||+|+|+.... ...++|++|+||||||
T Consensus 413 ~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~~~~--------------~p~p~~~vl~GaLVGG 478 (611)
T 2yik_A 413 TPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLKDAN--------------DSSPHKYVLYGALVGG 478 (611)
T ss_dssp SCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCSCTT--------------CCSCCSSCCTTCBCSC
T ss_pred cHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCccccc--------------CCCCCCCCCCceeecC
Confidence 46899999999999999999999999999999999999999999874211 1223489999999999
Q ss_pred CCCCCCccccCCCcccccccccchhhHHHHHHHhhcCCC
Q 043973 85 PNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKS 123 (124)
Q Consensus 85 P~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~ 123 (124)
||..|+|.|+|.+|++|||||||||+||++||+|...++
T Consensus 479 Pd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~ 517 (611)
T 2yik_A 479 PDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFG 517 (611)
T ss_dssp CCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999987544
No 3
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=3.6e-39 Score=279.64 Aligned_cols=106 Identities=38% Similarity=0.537 Sum_probs=93.8
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCC--CCCCCcceeee
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHS--SNPNILVGAIV 82 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~--~~p~~l~GalV 82 (124)
.+++|++||++|||||||+||+++|||||||+|+|++||||+|+|+-. .+++. ++|++|+||||
T Consensus 338 ~~~~y~~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~ss~~~~--------------~~~~~p~~~~~vl~GaLV 403 (605)
T 1tf4_A 338 RKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWT--------------DSIASPAENRHVLYGALV 403 (605)
T ss_dssp HHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTCSS--------------SCTTSSSSCSSCCTTCBC
T ss_pred cHHHHHHHHHHHHHHhcCCCCCCcceEecCCCCCCCCCcccccccCcc--------------ccccCCccCCCCCcceEE
Confidence 357899999999999999999999999999999999999999986321 12222 34899999999
Q ss_pred cCCCC-CCCccccCCCcccccccccchhhHHHHHHHhhcCCCC
Q 043973 83 GGPNQ-NDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKSG 124 (124)
Q Consensus 83 GGP~~-~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 124 (124)
||||. +|+|.|+|.+|++|||||||||+||++||+|...++|
T Consensus 404 GGP~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~ 446 (605)
T 1tf4_A 404 GGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGG 446 (605)
T ss_dssp CCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHCC
T ss_pred eCCCCCcccccccccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence 99998 9999999999999999999999999999999876543
No 4
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=1.9e-39 Score=274.44 Aligned_cols=106 Identities=32% Similarity=0.442 Sum_probs=94.2
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecC
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGG 84 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGG 84 (124)
++++|++||++|||||||+| ++|||||||+|+|++||||+|+||... .| -...++|++|+||||||
T Consensus 360 ~~~~y~~~A~~qidYiLG~N--~~SyvvG~G~~~p~~pHHR~ss~~~~~------~~------~~p~p~~~vl~GaLVGG 425 (466)
T 2xfg_A 360 KAKTYLEFARSQADYALGST--GRSFVVGFGENPPKRPHHRTAHGSWAD------SQ------MEPPEHRHVLYGALVGG 425 (466)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHTCSSS------CT------TSSSSCSSCCTTCBCCC
T ss_pred cHHHHHHHHHHhHHhhcCCC--CcceEeccCCCCCCCCcCchhccCccc------cc------cCCCCCCCCCccceeeC
Confidence 37899999999999999999 999999999999999999999986421 01 11234589999999999
Q ss_pred CCCCCCccccCCCcccccccccchhhHHHHHHHhhcCCCC
Q 043973 85 PNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKSG 124 (124)
Q Consensus 85 P~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~~ 124 (124)
||.+|+|.|+|.+|++|||||||||+||++||+|...++|
T Consensus 426 P~~~D~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~g~ 465 (466)
T 2xfg_A 426 PDSTDNYTDDISNYTCNEVACDYNAGFVGLLAKMYKLYGE 465 (466)
T ss_dssp CCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCccCcCcccccccccccchhhhHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999988775
No 5
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=4.3e-39 Score=269.69 Aligned_cols=108 Identities=42% Similarity=0.612 Sum_probs=97.0
Q ss_pred cChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCC--CCCCcceee
Q 043973 4 VIPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSS--NPNILVGAI 81 (124)
Q Consensus 4 ~~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~--~p~~l~Gal 81 (124)
+.+++|+++|++|||||||+| ++|||||||+|+|++||||+|+||+. | ..|..++ .+++ +|++|+|||
T Consensus 322 ~~~~~y~~~A~~qldYiLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~~---~--~~c~~~~---~~~~~pn~~~l~Gal 391 (433)
T 1ks8_A 322 LSASSYRQFAQTQIDYALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPA---P--ATCDWNT---FNSPDPNYHVLSGAL 391 (433)
T ss_dssp SSHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHCCCT---T--SCCSHHH---HTCSSCCSSCCTTCB
T ss_pred CCHHHHHHHHHHhHhhccCCC--CcceEeccCCCCCCCCcchhhcCCCc---c--ccccccc---cCCCCCCCCCCccce
Confidence 467899999999999999998 88999999999999999999999864 3 3787653 4444 478999999
Q ss_pred ecCCCCCCCccccCCCcccccccccchhhHHHHHHHhhcC
Q 043973 82 VGGPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGG 121 (124)
Q Consensus 82 VGGP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 121 (124)
|||||..|+|.|+|.+|++|||||||||+||++||+|...
T Consensus 392 vGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 392 VGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp CCCCCTTSCCCCCTTCHHHHCCCHHHHHHHHHHHHHHHHT
T ss_pred ecCCCcccCcCcCccccccccccHHhHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999764
No 6
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=7.2e-38 Score=268.32 Aligned_cols=97 Identities=31% Similarity=0.514 Sum_probs=89.5
Q ss_pred hhHHHHHH-HhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecC
Q 043973 6 PRGKIRNK-MYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGG 84 (124)
Q Consensus 6 ~~~y~~~a-~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGG 84 (124)
..+|+++| ++|||||||+||+++|||||||+|+|++||||.++++.. +++++||||||
T Consensus 423 ~~~y~~~aa~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~s~~~~~---------------------~~p~~GalVGG 481 (537)
T 3gzk_A 423 LHPAAHTVAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVADDV---------------------DHPVPGMVVGG 481 (537)
T ss_dssp CCTTHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCSCBCHHHHHHCT---------------------TSCCTTCBCCC
T ss_pred CHHHHHHHHHHhHHHhcCCCCCCceeEecCCCCCCCCCcchhhhcCCC---------------------CCCCCCCCccC
Confidence 36799999 999999999999999999999999999999999876431 67899999999
Q ss_pred CCCC----------------CCccccCCCcccccccccchhhHHHHHHHhhcCCC
Q 043973 85 PNQN----------------DGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKS 123 (124)
Q Consensus 85 P~~~----------------d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~ 123 (124)
||.. |+|.|+|.+|++|||||||||+||++||+|.+..+
T Consensus 482 Pn~~~~D~~~~~~~~~~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~g 536 (537)
T 3gzk_A 482 PNRHLQDEIARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEARG 536 (537)
T ss_dssp CCTTCCSHHHHHHCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHSCCC
T ss_pred CCcccccchhhhcccCCCcccCcCCCCccccccccchHHHHHHHHHHHHHHHhcC
Confidence 9976 89999999999999999999999999999998765
No 7
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=1.3e-37 Score=270.39 Aligned_cols=105 Identities=28% Similarity=0.389 Sum_probs=92.1
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecC
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGG 84 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGG 84 (124)
++++|++||++|||||||+| ++|||||||+++|++||||+|+|+... .| -...++|++|+||||||
T Consensus 337 ~~~~y~~~A~~qidYiLG~n--~~SyvvG~G~~~p~~pHHR~ss~~~~~------~~------~~p~p~~~~l~GaLVGG 402 (614)
T 1g87_A 337 KVSVYKDFLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAHGSWTD------QM------TSPTYHRHTIYGALVGG 402 (614)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--SSCCBTTSSSSCCSCCBCHHHHTCSSS------CT------TSSSSCSSCCTTCBCCC
T ss_pred CHHHHHHHHHHHHHHhcCCC--CcceEeccCCCCCCCCcchhhccCccc------cc------cCCCCCCCCccccEeeC
Confidence 37899999999999999998 889999999999999999999986421 01 01234589999999999
Q ss_pred CCCCCCccccCCCcccccccccchhhHHHHHHHhhcCCC
Q 043973 85 PNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGGKS 123 (124)
Q Consensus 85 P~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~~~ 123 (124)
||..|+|.|+|.+|++|||||||||+||++||+|...++
T Consensus 403 P~~~D~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~ 441 (614)
T 1g87_A 403 PDNADGYTDEINNYVNNEIACDYNAGFTGALAKMYKHSG 441 (614)
T ss_dssp CCTTSCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCcccCccccccchhhcCCccccchHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999987543
No 8
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=1.4e-36 Score=263.32 Aligned_cols=115 Identities=21% Similarity=0.234 Sum_probs=95.9
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCC-CcccCCCCCccccCCCCCCCcceeeec
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHP-QSIRCDGGFEPFFHSSNPNILVGAIVG 83 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p-~~~~c~~g~~~~~~~~~p~~l~GalVG 83 (124)
...+|+++|++|||||||+||+++|||||||+|+|++||||+++.+.....| ...+|..|. .-...++|++ .|||||
T Consensus 492 ~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l~Gg-p~~~~~dp~~-~ga~vg 569 (609)
T 1ut9_A 492 GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGIISGG-PNSRFEDPTI-NAAVKK 569 (609)
T ss_dssp CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCBCCC-CCTTCCSHHH-HHHSCT
T ss_pred ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCCCCC-CCCCCCCccc-ccccCC
Confidence 4578999999999999999999999999999999999999987754433232 245787664 1112234565 899999
Q ss_pred CCCCCCCccccCCCcccccccccchhhHHHHHHHhhcC
Q 043973 84 GPNQNDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGG 121 (124)
Q Consensus 84 GP~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 121 (124)
||+.+|+|.|+|.+|++|||||||||+||++||+|.+.
T Consensus 570 gp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 570 DTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp TCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred CCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999754
No 9
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=6.4e-35 Score=254.21 Aligned_cols=96 Identities=26% Similarity=0.289 Sum_probs=88.3
Q ss_pred ChhHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecC
Q 043973 5 IPRGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGG 84 (124)
Q Consensus 5 ~~~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGG 84 (124)
.+++|++||++|||||||+||+++|||||||.|+|++||||.++++ ++ |++++||||||
T Consensus 468 ~~~~~~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~-------------~~--------~~~~~GalVGG 526 (639)
T 1clc_A 468 PNNDYVNAALDAISHVFGRNYYNRSYVTGLGINPPMNPHDRRSGAD-------------GI--------WEPWPGYLVGG 526 (639)
T ss_dssp CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSSCBCHHHHHS-------------SC--------SSCCSSCBCCC
T ss_pred CHHHHHHHHHHHHhhccCCCCCCceEEEecCCCCCCCCcchhhccC-------------CC--------CCCCCeeeecC
Confidence 5689999999999999999999999999999999999999976542 12 57799999999
Q ss_pred CCC-CCCccccCCCcccccccccchhhHHHHHHHhhcC
Q 043973 85 PNQ-NDGFPDDRSDYSHSEPATYINAAMVGPLAYFAGG 121 (124)
Q Consensus 85 P~~-~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 121 (124)
|+. +|+|.|+|.+|++|||+|||||+|+++||+|...
T Consensus 527 P~~~~d~y~D~r~~y~~nE~~~~~nA~~v~~la~~~~~ 564 (639)
T 1clc_A 527 GWPGPKDWVDIQDSYQTNEIAINWNAALIYALAGFVNY 564 (639)
T ss_dssp CCSSTTCCCCCTTCTTTSBCCHHHHHHHHHHHHTTTTC
T ss_pred CCccccccccCcccceeccccccchHHHHHHHHHhhhc
Confidence 999 9999999999999999999999999999998764
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=99.55 E-value=1.4e-15 Score=131.91 Aligned_cols=84 Identities=19% Similarity=0.187 Sum_probs=65.8
Q ss_pred hHHHHHHHhcchhhcCCCCCCCceEEeeCCCCCCCcccCCCCccccCCCCCcccCCCCCccccCCCCCCCcceeeecCCC
Q 043973 7 RGKIRNKMYKVDYILGVNPLKMSYMVGFGPNFSRRIHHRGSSLLSLANHPQSIRCDGGFEPFFHSSNPNILVGAIVGGPN 86 (124)
Q Consensus 7 ~~y~~~a~~QidYiLG~Np~g~SyvvG~G~~~P~~pHHR~ss~p~~~~~p~~~~c~~g~~~~~~~~~p~~l~GalVGGP~ 86 (124)
.+|+++|++|||||||+||+++|||||||+|+|+ ||.+. ++ ++ ++|.|+|||+
T Consensus 468 ~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~---------------~~--------~~-~pG~i~gG~~ 520 (586)
T 3h7l_A 468 QQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQY---------------GF--------FN-AKGGVCNGIT 520 (586)
T ss_dssp HHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGG---------------TB--------CC-CTTCBBCCCE
T ss_pred HHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCccc---------------CC--------CC-CCccccCCCC
Confidence 7899999999999999999999999999999887 67532 22 34 7899999998
Q ss_pred CC------------CCccccCCCcccccccccchhhHHHHHHH
Q 043973 87 QN------------DGFPDDRSDYSHSEPATYINAAMVGPLAY 117 (124)
Q Consensus 87 ~~------------d~y~D~r~~y~~nEvaid~NA~lv~~lA~ 117 (124)
.. ....|.-.+|..+|--|=--|=+..+++.
T Consensus 521 ~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~ 563 (586)
T 3h7l_A 521 GGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMS 563 (586)
T ss_dssp ECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHH
T ss_pred CCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHH
Confidence 52 12335667899999887766655555543
No 11
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=34.03 E-value=13 Score=31.89 Aligned_cols=15 Identities=47% Similarity=0.767 Sum_probs=13.4
Q ss_pred CCCcceeeecCCCCC
Q 043973 74 PNILVGAIVGGPNQN 88 (124)
Q Consensus 74 p~~l~GalVGGP~~~ 88 (124)
|++++|+|||||+..
T Consensus 543 ~~~~~G~l~Ggp~~~ 557 (609)
T 1ut9_A 543 PAPPPGIISGGPNSR 557 (609)
T ss_dssp CCCCSSCBCCCCCTT
T ss_pred CCCCCCCCCCCCCCC
Confidence 789999999999974
No 12
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=21.60 E-value=21 Score=24.46 Aligned_cols=21 Identities=29% Similarity=0.570 Sum_probs=13.1
Q ss_pred CCCCCceEEeeCCCCCCCccc
Q 043973 24 NPLKMSYMVGFGPNFSRRIHH 44 (124)
Q Consensus 24 Np~g~SyvvG~G~~~P~~pHH 44 (124)
.|....||-|||-+.-.+-||
T Consensus 128 ~p~~~r~V~GFG~~~~~~~~~ 148 (148)
T 3tgv_A 128 QPEQGLFVKGFGLEHHHHHHH 148 (148)
T ss_dssp EECSCCEEESCGGGC------
T ss_pred EeEEEEEECccccceecccCC
Confidence 577899999999886554444
Done!