Query 043979
Match_columns 443
No_of_seqs 308 out of 2260
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 17:41:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/043979.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/043979hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 1.5E-69 5E-74 575.7 45.2 393 1-405 166-604 (605)
2 3d2f_A Heat shock protein homo 100.0 4.4E-68 1.5E-72 568.9 43.6 399 1-407 169-628 (675)
3 2kho_A Heat shock protein 70; 100.0 7.6E-69 2.6E-73 570.2 37.1 391 1-405 166-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.1E-61 3.7E-66 510.7 41.0 339 1-341 170-519 (554)
5 2v7y_A Chaperone protein DNAK; 100.0 1.5E-59 5.3E-64 490.1 37.2 331 1-341 140-485 (509)
6 3i33_A Heat shock-related 70 k 100.0 6.6E-36 2.3E-40 303.2 24.1 204 1-204 189-403 (404)
7 4gni_A Putative heat shock pro 100.0 7.5E-36 2.6E-40 303.3 22.4 202 1-203 181-402 (409)
8 3qfu_A 78 kDa glucose-regulate 100.0 5.6E-35 1.9E-39 295.1 24.1 200 1-203 184-394 (394)
9 4e81_A Chaperone protein DNAK; 100.0 2.8E-34 9.5E-39 265.2 22.0 188 214-405 2-216 (219)
10 1dkg_D Molecular chaperone DNA 100.0 1.9E-33 6.6E-38 283.0 22.4 199 1-203 166-383 (383)
11 1u00_A HSC66, chaperone protei 100.0 3E-31 1E-35 247.1 23.3 186 216-407 1-215 (227)
12 3dob_A Heat shock 70 kDa prote 99.9 4.9E-27 1.7E-31 204.3 16.4 127 215-341 2-128 (152)
13 3h0x_A 78 kDa glucose-regulate 99.9 8.8E-27 3E-31 203.0 16.6 127 215-341 2-128 (152)
14 3dqg_A Heat shock 70 kDa prote 99.9 1.8E-26 6.1E-31 200.5 17.3 126 215-341 2-127 (151)
15 3n8e_A Stress-70 protein, mito 99.9 2.3E-26 7.8E-31 205.6 17.9 160 210-376 17-176 (182)
16 1jce_A ROD shape-determining p 99.9 1.5E-26 5.1E-31 229.4 13.0 185 1-203 126-327 (344)
17 2op6_A Heat shock 70 kDa prote 99.9 1.9E-24 6.7E-29 188.9 16.8 127 215-341 2-128 (152)
18 1q5l_A Chaperone protein DNAK; 99.9 2.1E-23 7.2E-28 178.0 12.1 120 210-329 14-133 (135)
19 4a2a_A Cell division protein F 99.8 9.8E-20 3.4E-24 184.6 14.6 173 2-202 186-394 (419)
20 2ych_A Competence protein PILM 99.8 2.5E-18 8.5E-23 172.2 12.5 153 2-177 169-331 (377)
21 2fsj_A Hypothetical protein TA 99.8 2.9E-18 1E-22 169.8 12.0 163 1-200 166-343 (346)
22 3h1q_A Ethanolamine utilizatio 99.7 2.1E-17 7.1E-22 158.0 13.2 141 2-199 124-272 (272)
23 2zgy_A Plasmid segregation pro 99.6 2.7E-16 9.1E-21 154.1 7.5 161 2-199 144-319 (320)
24 1k8k_A ARP3, actin-like protei 99.6 2.7E-15 9.4E-20 152.3 11.1 187 1-201 139-387 (418)
25 2fxu_A Alpha-actin-1, actin, a 99.6 3.2E-15 1.1E-19 149.7 9.3 181 1-200 132-348 (375)
26 3lof_A Heat shock 70 kDa prote 99.5 1.7E-14 6E-19 119.1 9.1 93 342-443 21-113 (113)
27 1ud0_A HSC70, 70 kDa heat-shoc 99.5 6E-14 2.1E-18 115.9 6.8 103 335-443 7-113 (113)
28 4ehu_A Activator of 2-hydroxyi 99.4 1.2E-12 4E-17 125.3 15.2 166 1-203 74-256 (276)
29 2p32_A Heat shock 70 kDa prote 99.4 4.2E-13 1.4E-17 111.9 7.7 91 342-443 30-120 (120)
30 3js6_A Uncharacterized PARM pr 99.4 1.4E-12 4.8E-17 129.2 9.5 166 1-203 157-338 (355)
31 4apw_A ALP12; actin-like prote 99.2 7.5E-11 2.6E-15 115.7 11.2 164 2-203 153-326 (329)
32 1k8k_B ARP2, actin-like protei 99.1 1.2E-10 4.2E-15 117.0 7.8 174 1-200 136-363 (394)
33 1nbw_A Glycerol dehydratase re 98.9 1E-09 3.4E-14 111.4 6.1 171 5-200 392-605 (607)
34 2d0o_A DIOL dehydratase-reacti 98.9 9.3E-10 3.2E-14 111.2 4.7 171 5-200 390-603 (610)
35 3dwl_A Actin-related protein 3 98.3 2.4E-07 8.1E-12 93.8 3.5 184 2-200 156-395 (427)
36 1hux_A Activator of (R)-2-hydr 98.1 3.4E-05 1.2E-09 73.0 12.7 73 125-202 185-257 (270)
37 3qb0_A Actin-related protein 4 97.8 3.4E-05 1.2E-09 79.1 8.2 66 135-200 394-470 (498)
38 2i7n_A Pantothenate kinase 1; 97.0 0.0064 2.2E-07 59.4 12.4 47 153-199 306-358 (360)
39 4fo0_A Actin-related protein 8 96.9 0.0063 2.2E-07 63.8 12.3 49 153-201 501-564 (593)
40 3l0q_A Xylulose kinase; xlylul 96.7 0.004 1.4E-07 64.9 9.0 85 118-204 408-492 (554)
41 2itm_A Xylulose kinase, xylulo 96.7 0.0029 1E-07 64.7 7.6 81 120-204 357-437 (484)
42 2zf5_O Glycerol kinase; hypert 96.5 0.0054 1.8E-07 63.0 8.7 76 126-204 368-443 (497)
43 4bc3_A Xylulose kinase; transf 96.5 0.0054 1.9E-07 63.6 8.8 78 125-204 407-484 (538)
44 3hz6_A Xylulokinase; xylulose, 96.5 0.0052 1.8E-07 63.3 8.6 79 120-204 375-453 (511)
45 2ews_A Pantothenate kinase; PA 96.3 0.011 3.6E-07 56.2 8.6 76 119-199 207-286 (287)
46 3ll3_A Gluconate kinase; xylul 96.3 0.008 2.7E-07 61.8 8.4 80 120-204 364-443 (504)
47 3i8b_A Xylulose kinase; strain 96.3 0.0059 2E-07 63.0 7.2 77 120-204 395-474 (515)
48 2dpn_A Glycerol kinase; thermu 96.1 0.012 4.1E-07 60.4 8.5 80 120-204 368-448 (495)
49 3g25_A Glycerol kinase; IDP007 96.1 0.0082 2.8E-07 61.7 7.2 51 152-204 404-454 (501)
50 3ifr_A Carbohydrate kinase, FG 96.1 0.0071 2.4E-07 62.3 6.4 51 152-204 400-450 (508)
51 3jvp_A Ribulokinase; PSI-II, N 96.0 0.0093 3.2E-07 62.4 7.2 80 120-204 410-490 (572)
52 3ezw_A Glycerol kinase; glycer 96.0 0.0083 2.8E-07 62.1 6.7 81 119-204 371-452 (526)
53 3h3n_X Glycerol kinase; ATP-bi 96.0 0.0089 3E-07 61.5 6.8 80 120-204 373-453 (506)
54 4e1j_A Glycerol kinase; struct 96.0 0.0066 2.3E-07 62.7 5.8 51 152-204 425-475 (520)
55 2p3r_A Glycerol kinase; glycer 96.0 0.009 3.1E-07 61.5 6.6 51 152-204 401-451 (510)
56 2w40_A Glycerol kinase, putati 95.7 0.013 4.4E-07 60.3 6.3 80 120-204 376-457 (503)
57 2d4w_A Glycerol kinase; alpha 95.6 0.016 5.6E-07 59.5 6.9 80 120-204 373-453 (504)
58 2uyt_A Rhamnulokinase; rhamnos 95.4 0.02 7E-07 58.5 6.5 79 118-202 361-440 (489)
59 3h6e_A Carbohydrate kinase, FG 93.9 0.1 3.4E-06 53.3 7.4 72 125-202 362-436 (482)
60 4am6_A Actin-like protein ARP8 87.5 0.55 1.9E-05 49.0 5.3 83 2-99 254-346 (655)
61 3eno_A Putative O-sialoglycopr 85.1 2 6.7E-05 41.4 7.6 69 131-204 233-306 (334)
62 3vth_A Hydrogenase maturation 84.1 1.6 5.4E-05 46.8 6.9 67 133-204 679-750 (761)
63 3cer_A Possible exopolyphospha 84.0 0.73 2.5E-05 44.6 4.0 44 2-45 120-165 (343)
64 2ivn_A O-sialoglycoprotein end 84.0 2.2 7.5E-05 40.9 7.4 66 133-203 230-300 (330)
65 3mdq_A Exopolyphosphatase; str 83.8 0.55 1.9E-05 44.9 3.0 42 2-44 107-149 (315)
66 1t6c_A Exopolyphosphatase; alp 83.8 0.8 2.7E-05 43.8 4.1 20 25-44 137-156 (315)
67 3ttc_A HYPF, transcriptional r 83.3 2.8 9.7E-05 44.0 8.3 65 132-201 584-651 (657)
68 2e2o_A Hexokinase; acetate and 82.6 2.4 8.4E-05 39.6 7.0 50 152-202 239-288 (299)
69 4g9i_A Hydrogenase maturation 82.1 3.7 0.00013 44.1 8.8 64 134-202 692-760 (772)
70 3qbx_A Anhydro-N-acetylmuramic 81.1 4.1 0.00014 39.6 7.9 73 126-201 260-336 (371)
71 3ven_A O-carbamoyltransferase 79.6 5.5 0.00019 41.1 8.7 80 121-205 280-361 (576)
72 3cqy_A Anhydro-N-acetylmuramic 76.3 8.3 0.00028 37.4 8.4 70 125-200 266-341 (370)
73 2gup_A ROK family protein; sug 74.6 11 0.00037 34.9 8.7 50 152-201 227-287 (292)
74 1u6z_A Exopolyphosphatase; alp 72.2 2.2 7.6E-05 43.6 3.5 52 118-174 236-308 (513)
75 3hi0_A Putative exopolyphospha 71.8 2.4 8.3E-05 43.2 3.6 40 2-44 118-158 (508)
76 2e1z_A Propionate kinase; TDCD 71.6 72 0.0024 31.3 13.9 44 129-176 311-355 (415)
77 3aap_A Ectonucleoside triphosp 70.0 2.7 9.2E-05 40.7 3.4 20 25-44 139-158 (353)
78 3r8e_A Hypothetical sugar kina 69.5 16 0.00054 34.4 8.7 69 131-200 240-318 (321)
79 4htl_A Beta-glucoside kinase; 67.9 14 0.00046 34.5 7.8 51 152-202 237-292 (297)
80 2qm1_A Glucokinase; alpha-beta 67.9 12 0.0004 35.2 7.4 50 152-201 262-321 (326)
81 4db3_A Glcnac kinase, N-acetyl 66.9 13 0.00044 35.2 7.4 48 152-199 269-324 (327)
82 2aa4_A Mannac kinase, putative 66.7 9.8 0.00034 35.1 6.5 49 152-200 233-287 (289)
83 3cet_A Conserved archaeal prot 63.1 4.8 0.00016 38.5 3.4 71 120-198 244-321 (334)
84 1zbs_A Hypothetical protein PG 60.2 3.6 0.00012 38.4 2.1 67 127-201 211-280 (291)
85 1hnj_A Beta-ketoacyl-acyl carr 60.2 11 0.00037 35.4 5.5 48 127-177 212-259 (317)
86 3vgl_A Glucokinase; ROK family 58.9 24 0.00082 33.1 7.7 49 152-200 252-311 (321)
87 1zc6_A Probable N-acetylglucos 57.8 6.3 0.00022 36.9 3.3 61 130-200 230-292 (305)
88 3f9m_A Glucokinase; hexokinase 57.3 17 0.00059 36.4 6.5 26 24-49 75-100 (470)
89 3htv_A D-allose kinase, alloki 57.2 32 0.0011 32.2 8.2 50 152-201 239-299 (310)
90 1saz_A Probable butyrate kinas 55.2 26 0.0009 33.9 7.5 49 152-200 295-347 (381)
91 3vov_A Glucokinase, hexokinase 55.2 28 0.00097 32.3 7.5 49 152-200 237-294 (302)
92 3hm8_A Hexokinase-3; glucose, 54.9 18 0.00061 36.1 6.1 25 24-48 57-81 (445)
93 2pk2_A Cyclin-T1, protein TAT; 54.2 5.1 0.00018 38.8 2.0 14 189-202 81-94 (358)
94 1ub7_A 3-oxoacyl-[acyl-carrier 54.2 14 0.00048 34.7 5.1 47 128-177 215-261 (322)
95 2ebd_A 3-oxoacyl-[acyl-carrier 53.6 15 0.00052 34.1 5.3 46 129-177 206-251 (309)
96 2hoe_A N-acetylglucosamine kin 52.1 41 0.0014 32.4 8.3 49 152-200 314-370 (380)
97 3cj1_A Ectonucleoside triphosp 50.2 8.1 0.00028 38.8 2.8 20 25-44 189-208 (456)
98 3en9_A Glycoprotease, O-sialog 49.3 26 0.00089 35.7 6.6 41 132-177 233-273 (540)
99 1zow_A 3-oxoacyl-[acyl-carrier 48.2 36 0.0012 31.5 7.0 47 128-177 207-253 (313)
100 2ap1_A Putative regulator prot 46.3 14 0.00047 34.9 3.7 26 23-48 21-46 (327)
101 3lay_A Zinc resistance-associa 45.4 34 0.0012 29.4 5.6 61 330-396 66-129 (175)
102 1zxo_A Conserved hypothetical 45.0 4 0.00014 38.1 -0.4 68 128-200 210-277 (291)
103 3epq_A Putative fructokinase; 44.8 46 0.0016 30.9 7.1 49 152-200 224-288 (302)
104 2pk2_A Cyclin-T1, protein TAT; 44.3 4.7 0.00016 39.1 0.0 9 332-340 229-237 (358)
105 1z6r_A MLC protein; transcript 43.8 47 0.0016 32.2 7.3 50 152-201 334-393 (406)
106 2q2r_A Glucokinase 1, putative 43.2 37 0.0013 32.5 6.3 50 152-201 304-371 (373)
107 1mzj_A Beta-ketoacylsynthase I 42.9 19 0.00064 34.1 4.1 47 128-177 226-272 (339)
108 2x3e_A 3-oxoacyl-[acyl-carrier 42.6 20 0.0007 33.7 4.3 47 128-177 219-265 (331)
109 3zyy_X Iron-sulfur cluster bin 42.4 44 0.0015 34.8 6.9 57 116-173 499-555 (631)
110 2ch5_A NAGK protein; transfera 42.4 23 0.0008 33.4 4.7 48 155-203 268-326 (347)
111 2yhw_A Bifunctional UDP-N-acet 40.5 78 0.0027 29.7 8.1 67 130-200 263-337 (343)
112 4am6_A Actin-like protein ARP8 38.7 15 0.00051 38.4 2.7 47 130-176 476-524 (655)
113 1ted_A PKS18; thiolase fold, s 38.1 35 0.0012 33.1 5.2 47 128-177 282-328 (393)
114 4dfe_A 3-oxoacyl-[acyl-carrier 36.3 46 0.0016 31.3 5.7 48 127-177 228-275 (333)
115 1u6e_A 3-oxoacyl-[acyl-carrier 35.9 28 0.00096 32.7 4.0 45 130-177 229-273 (335)
116 3o8m_A Hexokinase; rnaseh-like 35.6 78 0.0027 31.8 7.4 25 24-48 78-102 (485)
117 3s21_A 3-oxoacyl-[ACP] synthas 33.3 59 0.002 30.7 5.9 48 126-176 239-286 (345)
118 1ycp_F Fibrinopeptide A-alpha; 33.1 13 0.00045 21.1 0.6 11 431-441 12-22 (26)
119 1z05_A Transcriptional regulat 32.7 76 0.0026 31.0 6.8 24 25-48 107-130 (429)
120 1g99_A Acetate kinase; alpha/b 31.5 67 0.0023 31.4 5.9 45 128-176 302-347 (408)
121 3zx3_A Ectonucleoside triphosp 31.5 21 0.00073 35.6 2.4 20 25-44 180-199 (452)
122 1j3n_A 3-oxoacyl-(acyl-carrier 30.4 36 0.0012 33.1 3.9 45 133-177 275-321 (408)
123 2gp6_A 3-oxoacyl-[acyl-carrier 29.6 53 0.0018 32.4 5.0 46 133-178 302-349 (434)
124 3eno_A Putative O-sialoglycopr 28.8 77 0.0026 30.0 5.8 44 129-172 50-93 (334)
125 3qvl_A Putative hydantoin race 28.6 69 0.0024 28.9 5.2 54 132-196 159-212 (245)
126 2ivn_A O-sialoglycoprotein end 28.4 78 0.0027 29.8 5.7 44 127-170 43-86 (330)
127 3nq4_A 6,7-dimethyl-8-ribityll 28.0 61 0.0021 27.2 4.3 46 129-175 24-70 (156)
128 1sz2_A Glucokinase, glucose ki 27.5 91 0.0031 29.1 6.1 70 129-200 242-325 (332)
129 1bdg_A Hexokinase; phosphotran 27.4 33 0.0011 34.2 3.0 70 126-201 365-446 (451)
130 3gwa_A 3-oxoacyl-(acyl-carrier 26.4 1.2E+02 0.0041 28.9 6.8 47 127-176 260-306 (365)
131 4ewp_A 3-oxoacyl-[acyl-carrier 26.2 94 0.0032 29.3 6.0 48 126-176 242-289 (350)
132 3fcg_A F1 capsule-anchoring pr 25.7 2.1E+02 0.0073 21.4 7.1 55 259-327 26-80 (90)
133 2gel_A Putative GRAM negative 25.2 74 0.0025 28.3 4.7 39 132-170 35-73 (231)
134 3r6m_A YEAZ, resuscitation pro 25.1 66 0.0023 28.4 4.3 65 131-195 35-103 (213)
135 3euo_A Type III pentaketide sy 24.9 1.7E+02 0.0058 28.0 7.6 49 129-177 79-128 (379)
136 1cza_N Hexokinase type I; stru 24.8 1.5E+02 0.0051 32.4 7.8 26 23-48 523-548 (917)
137 2gqd_A 3-oxoacyl-[acyl-carrier 24.3 60 0.0021 31.9 4.3 45 133-177 301-347 (437)
138 1tqy_A Beta-ketoacyl synthase/ 23.7 63 0.0022 31.6 4.3 45 133-177 283-329 (424)
139 2iwz_A 3-oxoacyl-[acyl-carrier 23.5 64 0.0022 31.8 4.3 45 133-177 301-347 (438)
140 2h84_A Steely1; thiolase-fold, 23.2 83 0.0028 30.0 5.0 44 130-177 264-313 (374)
141 2a6a_A Hypothetical protein TM 23.2 71 0.0024 28.3 4.1 42 130-171 44-85 (218)
142 1xpm_A 3-hydroxy-3-methylgluta 23.1 69 0.0024 31.0 4.4 46 128-175 202-247 (396)
143 3h78_A PQS biosynthetic enzyme 23.1 1.6E+02 0.0055 27.9 7.0 47 127-176 248-294 (359)
144 3il3_A 3-oxoacyl-[acyl-carrier 22.9 1.8E+02 0.0061 27.1 7.2 47 127-176 218-264 (323)
145 1ox0_A Beta ketoacyl-acyl carr 22.8 69 0.0023 31.4 4.3 46 133-178 296-343 (430)
146 1e5m_A KAS II, beta ketoacyl a 22.8 68 0.0023 31.3 4.3 45 133-177 281-327 (416)
147 3ist_A Glutamate racemase; str 22.2 80 0.0027 28.9 4.4 58 135-198 163-220 (269)
148 4ewp_A 3-oxoacyl-[acyl-carrier 22.0 81 0.0028 29.7 4.6 43 135-177 66-110 (350)
149 4efi_A 3-oxoacyl-(acyl-carrier 21.6 1.6E+02 0.0056 27.7 6.7 47 127-176 238-284 (354)
150 3ov2_A Curcumin synthase; type 21.6 2.2E+02 0.0076 27.4 7.7 55 123-177 94-149 (393)
151 1bdg_A Hexokinase; phosphotran 21.4 77 0.0026 31.5 4.3 24 24-47 66-89 (451)
152 3uhf_A Glutamate racemase; str 21.4 69 0.0024 29.5 3.7 53 136-196 184-236 (274)
153 1u0m_A Putative polyketide syn 21.2 2.6E+02 0.0089 26.5 8.1 49 129-177 82-131 (382)
154 3a5r_A Benzalacetone synthase; 20.9 2E+02 0.0068 27.5 7.2 51 127-177 94-145 (387)
155 1ee0_A 2-pyrone synthase; poly 20.6 2.3E+02 0.008 27.2 7.7 52 126-177 102-154 (402)
156 3awk_A Chalcone synthase-like 20.4 2.7E+02 0.0093 26.7 8.1 51 127-177 111-162 (402)
157 3e1h_A PKSIIINC, putative unch 20.2 2.3E+02 0.0079 28.1 7.6 49 129-177 108-157 (465)
158 1cza_N Hexokinase type I; stru 20.1 48 0.0016 36.2 2.7 77 126-203 373-461 (917)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1.5e-69 Score=575.73 Aligned_cols=393 Identities=48% Similarity=0.760 Sum_probs=362.8
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeC----Ceeeeh-----------HHHHHHHHHHHH
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEE----GIFEVK-----------DFDNRLVNNFVA 65 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~----~~~~v~-----------d~D~~l~~~l~~ 65 (443)
++||+||+|||++|++.... .+.++||||+||||||+|++++.+ +.++++ |||++|++|+.+
T Consensus 166 ~~li~EP~AAAlaygl~~~~---~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 4b9q_A 166 KRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEEHHHHHHHHHHTTSCC---SSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHHHHHhhhhccC---CCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHH
Confidence 47999999999999987653 478999999999999999999988 888886 999999999999
Q ss_pred HHHhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCC----ceEEEEecHHHHHHHHHHHHHHHHHHHHH
Q 043979 66 EFKRKHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEG----IDFYATITRARFEVLNMDLFRKCMEHVEK 141 (443)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~----~~~~~~itr~efe~l~~~~~~~i~~~i~~ 141 (443)
+|.++++.++..+++++.+|+.+||++|+.||...++.+.++.+..+ .++.++|||++|+++++|+++++..+|++
T Consensus 243 ~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~ 322 (605)
T 4b9q_A 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKV 322 (605)
T ss_dssp HHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHH
T ss_pred HHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888765433 67899999999999999999999999999
Q ss_pred HHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhCCCCccccceEEEEeccc
Q 043979 142 CLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSGEGNEKVQDLLLLDVTPL 221 (443)
Q Consensus 142 ~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~ 221 (443)
+|+++++.+.+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. .+++.+.|++|+
T Consensus 323 ~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAai~a~~l~~~----~~~~~l~dv~p~ 397 (605)
T 4b9q_A 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPL 397 (605)
T ss_dssp HHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHH-TSCCCSSSCTTTHHHHHHHHHHHHHHTS----SCSEEEECBCSS
T ss_pred HHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHh-ccCcCCCcChhHHHHHhHHHHHHHhcCC----CCceEEEeeeee
Confidence 99999999999999999999999999999999999 6788999999999999999999999964 578999999999
Q ss_pred ccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCCeEEEEEE
Q 043979 222 SLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVPQINVCFD 301 (443)
Q Consensus 222 sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~~i~v~f~ 301 (443)
+||+++.+|.|.+|||||+++|++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|+|+||+|.|.++|+|+|.
T Consensus 398 slgie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~ 477 (605)
T 4b9q_A 398 SLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFD 477 (605)
T ss_dssp CEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEE
T ss_pred EEEEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH------------------Hhhcccc---------hhhhCC
Q 043979 302 IDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV------------------MRNTVRD---------EKFAGK 354 (443)
Q Consensus 302 ~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~------------------~r~~l~~---------~~~~~~ 354 (443)
+|.||+|+|++.+..||++.+++|++.. .||++||++|+ .||.++. +.+..+
T Consensus 478 id~~gil~v~a~~~~tg~~~~i~i~~~~-~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~~~~~~ 556 (605)
T 4b9q_A 478 IDADGILHVSAKDKNSGKEQKITIKASS-GLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVEEAGDK 556 (605)
T ss_dssp ECTTSCEEEEEEETTTCCEECCEEESCC-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred EcCCcEEEEEEEecCCCcEEEEEecCCC-CCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999999998764 69999999987 2232221 125568
Q ss_pred CChHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHc
Q 043979 355 LDPADKQKIEKAIDEAIEWLDGNQLAEVDELEDKLKELEGLCYPIIVKMYE 405 (443)
Q Consensus 355 ~~~~e~~~l~~~~~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e 405 (443)
+++++++.+..+++++++||+.+ +.++|++++++|++.+.||..++++
T Consensus 557 ~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 557 LPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred CCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999976 6899999999999999999998765
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=4.4e-68 Score=568.87 Aligned_cols=399 Identities=25% Similarity=0.399 Sum_probs=361.8
Q ss_pred CcccchhHHHHHHhccccCcCC---CCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHH
Q 043979 1 MRIINEPAAATIVYGLDKKASR---TGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAE 66 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~---~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~ 66 (443)
++||+||+|||++|++.+.... ..+.++||||+||||||+||+++.++.++|+ |||++|++|+.++
T Consensus 169 ~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~ 248 (675)
T 3d2f_A 169 VRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADE 248 (675)
T ss_dssp EEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHH
T ss_pred EEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHH
Confidence 4799999999999998653111 2478999999999999999999999988776 9999999999999
Q ss_pred HHhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 043979 67 FKRKHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNS 146 (443)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a 146 (443)
|.+++++++..+++++.+|+.+||++|+.||.+.++.+.++.++++.++.++|||++|+++|+|+++++..+|+++|+++
T Consensus 249 f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a 328 (675)
T 3d2f_A 249 FKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQA 328 (675)
T ss_dssp HHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHH
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999888899999888899999999999999999999999999999999999
Q ss_pred CCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhCCCCccccceEEEEecccccceE
Q 043979 147 KIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSGEGNEKVQDLLLLDVTPLSLGIE 226 (443)
Q Consensus 147 ~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~ 226 (443)
++++.+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.++ +.++++++.+.|++|++||++
T Consensus 329 ~l~~~~I~~VvLvGGssriP~v~~~l~~~f-g~~~~~~~nPdeaVA~GAa~~a~~ls--~~~~v~~~~l~Dv~p~slgi~ 405 (675)
T 3d2f_A 329 KLSAEEVDFVEIIGGTTRIPTLKQSISEAF-GKPLSTTLNQDEAIAKGAAFICAIHS--PTLRVRPFKFEDIHPYSVSYS 405 (675)
T ss_dssp TCCGGGCCEEEEESGGGGSHHHHHHHHHHH-TSCEECCSCTTTHHHHHHHHHHHHTC--SSCCCCCCEEEEEECSCEEEE
T ss_pred CCChhhCcEEEEECCCccChHHHHHHHHhc-CCCccccCCcchHHHHHHHHHHHHhC--CCCcccceEEEeeeecceEee
Confidence 999999999999999999999999999999 57788999999999999999999999 456788999999999999999
Q ss_pred eecC----eeEEEEeCCCCcCcceEEEeeecCCCCccEEEEE-eeccccccc-cCceeeEEEEeCCCCCCCCCC-eEEEE
Q 043979 227 TAGG----VMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQV-YEGERARAK-YNNLLGKFELMGIPPAPKGVP-QINVC 299 (443)
Q Consensus 227 ~~~~----~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~i-y~ge~~~~~-~n~~ig~~~l~~i~~~~~g~~-~i~v~ 299 (443)
+.++ .+.+|||+|+++|++++.+|++..++ .+.+ |+|++..+. +|..||+|.|+|+||++.|.+ +|+|+
T Consensus 406 ~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~----~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~v~ 481 (675)
T 3d2f_A 406 WDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDF----SMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVKLK 481 (675)
T ss_dssp ECCTTCSCSEEEEECTTEEESEEEEEEEEESSCE----EEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEEEE
T ss_pred ecCCCCCcceEEEEcCCCCCCcccceeeeecCCc----eEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEEEE
Confidence 9876 49999999999999999999987654 3444 779988887 999999999999999999975 89999
Q ss_pred EEecCCceEEEEEe----------eeccCeeeeEEEecCCCCCCHHHHHHHH----------------------------
Q 043979 300 FDIDANGILHVSAK----------DMTVGVKNHITITNDKGRLSKEEIERMV---------------------------- 341 (443)
Q Consensus 300 f~~d~~g~l~v~~~----------~~~tg~~~~i~i~~~~~~ls~eei~~~~---------------------------- 341 (443)
|.+|.||+|+|++. ++.+|++.+++|++...+||++||++|+
T Consensus 482 f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~~i~ 561 (675)
T 3d2f_A 482 LRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEEYIY 561 (675)
T ss_dssp EEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999995 6889999999998876689999999887
Q ss_pred -HhhcccchhhhCCCChHHHHHHHHHHHHHHHHhcCC-CCcCHHHHHHHHHHHHHhHHHHHHHHHccC
Q 043979 342 -MRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGN-QLAEVDELEDKLKELEGLCYPIIVKMYEGS 407 (443)
Q Consensus 342 -~r~~l~~~~~~~~~~~~e~~~l~~~~~~~~~Wl~~~-~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~ 407 (443)
+|+.|++ .+..++++++++++...++++++||+++ .++++++|++|+++|++.+.||..|++|..
T Consensus 562 ~~~~~l~~-~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~ 628 (675)
T 3d2f_A 562 TLRGKLEE-EYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKE 628 (675)
T ss_dssp HHHHHHTT-TTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4555543 3677899999999999999999999876 578999999999999999999999988865
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=7.6e-69 Score=570.23 Aligned_cols=391 Identities=49% Similarity=0.771 Sum_probs=361.4
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEe----CCeeeeh-----------HHHHHHHHHHHH
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIE----EGIFEVK-----------DFDNRLVNNFVA 65 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~-----------d~D~~l~~~l~~ 65 (443)
++||+||+|||++|++.... .+.++||||+||||||+|++++. ++.++|+ |||+.|++|+.+
T Consensus 166 ~~li~EP~AAAlay~l~~~~---~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~ 242 (605)
T 2kho_A 166 KRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (605)
T ss_dssp EEEEEHHHHHHHHTTTTSSS---SEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHH
T ss_pred EEEecCHHHHHHHhhhcccC---CCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHH
Confidence 47999999999999987642 47899999999999999999998 7888775 999999999999
Q ss_pred HHHhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccC---C-ceEEEEecHHHHHHHHHHHHHHHHHHHHH
Q 043979 66 EFKRKHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYE---G-IDFYATITRARFEVLNMDLFRKCMEHVEK 141 (443)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~---~-~~~~~~itr~efe~l~~~~~~~i~~~i~~ 141 (443)
+|+++++.++..+++++.+|+.+||++|+.||...++.+.++.+.+ | .++.++|||++|+++++|+++++..+|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~ 322 (605)
T 2kho_A 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKV 322 (605)
T ss_dssp HHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999888888886654 2 56788999999999999999999999999
Q ss_pred HHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhCCCCccccceEEEEeccc
Q 043979 142 CLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSGEGNEKVQDLLLLDVTPL 221 (443)
Q Consensus 142 ~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~ 221 (443)
+|+++++.+.+|+.|+||||+||+|+|++.|++.| +.++..+.||++|||+|||++|+.+++. ++++.+.|++|+
T Consensus 323 ~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f-g~~~~~~~npd~aVA~GAa~~a~~l~~~----~~~~~l~dv~p~ 397 (605)
T 2kho_A 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLTGD----VKDVLLLDVTPL 397 (605)
T ss_dssp HHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHHTTTTTS----CCCCCCSBCCCC
T ss_pred HHHHcCCChhhCceEEEECCcccChHHHHHHHHhc-CCCcCcCCCcchHHHHHHHHHHHHhcCC----ccCceEEeeeee
Confidence 99999999999999999999999999999999999 5778899999999999999999999863 578899999999
Q ss_pred ccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCCeEEEEEE
Q 043979 222 SLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVPQINVCFD 301 (443)
Q Consensus 222 sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~~i~v~f~ 301 (443)
+||+++.+|.|.++||||+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|+|+|++|.|.++|+|+|.
T Consensus 398 slgi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~ 477 (605)
T 2kho_A 398 SLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFD 477 (605)
T ss_dssp CEEEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEE
T ss_pred eccccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH-----------------------------Hhhcccchhhh
Q 043979 302 IDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV-----------------------------MRNTVRDEKFA 352 (443)
Q Consensus 302 ~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~-----------------------------~r~~l~~~~~~ 352 (443)
+|.||+|+|++.+..||++.+++|++. ..||++||++|+ +|+.|+ .+.
T Consensus 478 id~~gil~v~a~~~~tg~~~~i~i~~~-~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~--~~~ 554 (605)
T 2kho_A 478 IDADGILHVSAKDKNSGKEQKITIKAS-SGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVE--EAG 554 (605)
T ss_dssp ECTTSCEEEEEEETTTCCEEEEEECTT-SSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHG
T ss_pred EcCCCceeEEEEEcCCCceeecccccc-cCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhh
Confidence 999999999999999999999999887 679999999987 233332 266
Q ss_pred CCCChHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHc
Q 043979 353 GKLDPADKQKIEKAIDEAIEWLDGNQLAEVDELEDKLKELEGLCYPIIVKMYE 405 (443)
Q Consensus 353 ~~~~~~e~~~l~~~~~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e 405 (443)
.++++++++++.+.++++++||+++ +.++|++++++|++.++||..|+++
T Consensus 555 ~~~~~~~~~~i~~~~~~~~~~l~~~---~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 555 DKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp GGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999999999965 8999999999999999999999864
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.1e-61 Score=510.67 Aligned_cols=339 Identities=79% Similarity=1.161 Sum_probs=320.6
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~~~~ 69 (443)
++|++||+|||++|++.... ..+..+||||+||||||+|++++.++.++++ |||++|++|+.++|.+
T Consensus 170 ~~li~EP~AAAlay~~~~~~--~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~ 247 (554)
T 1yuw_A 170 LRIINEPTAAAIAYGLDKKV--GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKR 247 (554)
T ss_dssp EEEEEHHHHHHHHTTCSTTC--SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCcHHHHHHHHHhhccC--CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 47899999999999987643 2468999999999999999999999988766 9999999999999999
Q ss_pred hccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 043979 70 KHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSKID 149 (443)
Q Consensus 70 ~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~ 149 (443)
+++.++..+++++.+|+.+||++|+.||...++.+.++.+++|.++...|||++|+++++|+++++..+|+++|+++++.
T Consensus 248 ~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~ 327 (554)
T 1yuw_A 248 KHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLD 327 (554)
T ss_dssp HTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCC
T ss_pred HhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999988999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred cCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhCCCCccccceEEEEecccccceEeec
Q 043979 150 KSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSGEGNEKVQDLLLLDVTPLSLGIETAG 229 (443)
Q Consensus 150 ~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi~~~~ 229 (443)
+.+|+.|+||||+||+|+|++.|++.|++.++..+.||++|||+|||++|+.+++...++++++.+.|++|++||+++.+
T Consensus 328 ~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi~~~~ 407 (554)
T 1yuw_A 328 KSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAG 407 (554)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEEEETT
T ss_pred hhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEEEecC
Confidence 99999999999999999999999999977888899999999999999999999874345678899999999999999999
Q ss_pred CeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCCeEEEEEEecCCceEE
Q 043979 230 GVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVPQINVCFDIDANGILH 309 (443)
Q Consensus 230 ~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~~i~v~f~~d~~g~l~ 309 (443)
|.|.++|++|+++|++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|+|+|+++.|.++|+|+|.+|.||+|+
T Consensus 408 g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id~~gil~ 487 (554)
T 1yuw_A 408 GVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILN 487 (554)
T ss_dssp TEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEECTTCCEE
T ss_pred ceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcccccEEEEEEEEccCceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeeeccCeeeeEEEecCCCCCCHHHHHHHH
Q 043979 310 VSAKDMTVGVKNHITITNDKGRLSKEEIERMV 341 (443)
Q Consensus 310 v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~ 341 (443)
|++.+..||++.++++++..++||++||++|+
T Consensus 488 v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~ 519 (554)
T 1yuw_A 488 VSAVDKSTGKENKITITNDKGRLSKEDIERMV 519 (554)
T ss_dssp EEEEETTTCCEEEEEECCCSSCSCHHHHHHHH
T ss_pred EEEEeccCCCceeEEEecCCCCCCHHHHHHHH
Confidence 99999999999999999887889999999986
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.5e-59 Score=490.13 Aligned_cols=331 Identities=53% Similarity=0.853 Sum_probs=310.5
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~~~~ 69 (443)
++|++||+|||++|+.... .+.++||||+||||||+|++++.++.++++ |||+.|++|+.++|.+
T Consensus 140 ~~li~Ep~AAAlay~~~~~----~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~ 215 (509)
T 2v7y_A 140 ERIINEPTAAALAYGLDKE----EDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQ 215 (509)
T ss_dssp EEEEEHHHHHHHHTTGGGS----CSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHhhccC----CCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 4789999999999998764 378999999999999999999998888775 9999999999999999
Q ss_pred hccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccC---C-ceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHH
Q 043979 70 KHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYE---G-IDFYATITRARFEVLNMDLFRKCMEHVEKCLRN 145 (443)
Q Consensus 70 ~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~---~-~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~ 145 (443)
+++.++..+++.+.+|+.+||++|+.||...++.+.++.+.+ | .++.++|||++|+++++|+++++..+|+++|++
T Consensus 216 ~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~ 295 (509)
T 2v7y_A 216 EHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQD 295 (509)
T ss_dssp HHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999899889999999999999999999999888888886654 2 467789999999999999999999999999999
Q ss_pred cCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhCCCCccccceEEEEecccccce
Q 043979 146 SKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSGEGNEKVQDLLLLDVTPLSLGI 225 (443)
Q Consensus 146 a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~~~~~~~~~~~~~d~~~~sigi 225 (443)
+++.+.+|+.|+||||+|++|+|+++|++.| +.++..+.||++|||+|||++|+.+++. ++++.+.|++|++||+
T Consensus 296 a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-~~~~~~~~~p~~aVa~Gaa~~a~~l~~~----~~~~~~~dv~p~slgi 370 (509)
T 2v7y_A 296 AGLTPADIDKVILVGGSTRIPAVQEAIKREL-GKEPHKGVNPDEVVAIGAAIQGGVIAGE----VKDVVLLDVTPLSLGI 370 (509)
T ss_dssp HTCCGGGCSEEEEESGGGGCHHHHHHHHHHH-SSCCBCCSCTTTHHHHHHHHHHHHHHTC----CCCCCCCCBCSSEEEE
T ss_pred cCCChhHCcEEEEECCcccChHHHHHHHHHh-CCCcCcCCCchhhhHhhHHHHHHHhcCC----ccCceEEEeeccccce
Confidence 9999899999999999999999999999999 5678889999999999999999999864 5788999999999999
Q ss_pred EeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCCeEEEEEEecCC
Q 043979 226 ETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVPQINVCFDIDAN 305 (443)
Q Consensus 226 ~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~~i~v~f~~d~~ 305 (443)
++.++.|.++|+||+++|++++..|++..|+|+.+.|.+|||++..+.+|..||+|.|+++|++++|.++|+|+|++|.|
T Consensus 371 ~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id~~ 450 (509)
T 2v7y_A 371 ETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDIDAN 450 (509)
T ss_dssp EETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEECTT
T ss_pred eecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH
Q 043979 306 GILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV 341 (443)
Q Consensus 306 g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~ 341 (443)
|+|+|++.+..||++.+++|++. ..||++||++|+
T Consensus 451 gil~v~a~~~~~g~~~~~~i~~~-~~l~~~~i~~~~ 485 (509)
T 2v7y_A 451 GIVHVRAKDLGTNKEQSITIKSS-SGLSEEEIQRMI 485 (509)
T ss_dssp SCEEEEEEETTTCCEEEEEECSS-CSCCSHHHHHHH
T ss_pred ceEEEEEEEcCCCcEEEEEEEec-CCCCHHHHHHHH
Confidence 99999999999999999999887 679999999986
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=6.6e-36 Score=303.16 Aligned_cols=204 Identities=75% Similarity=1.122 Sum_probs=190.1
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~~~~ 69 (443)
++|++||+|||++|+.........+..+||||+||||||++++++.++.++++ +||+.|++++.++|..
T Consensus 189 ~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~ 268 (404)
T 3i33_A 189 LRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKR 268 (404)
T ss_dssp EEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999999887663222578999999999999999999999888775 9999999999999999
Q ss_pred hccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 043979 70 KHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSKID 149 (443)
Q Consensus 70 ~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~ 149 (443)
+++.++..+++.+.+|+.+||++|+.||....+.+.++.+.++.++.++|+|++|+++++|+++++..+|+++|+++++.
T Consensus 269 ~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 348 (404)
T 3i33_A 269 KHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLD 348 (404)
T ss_dssp HHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCC
T ss_pred HhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred cCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhC
Q 043979 150 KSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSG 204 (443)
Q Consensus 150 ~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~ 204 (443)
..+|+.|+||||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.+++
T Consensus 349 ~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 349 KGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp GGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999997788889999999999999999999874
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=7.5e-36 Score=303.31 Aligned_cols=202 Identities=31% Similarity=0.574 Sum_probs=184.3
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~~~~ 69 (443)
++||+||+|||++|+.... ....+..+||||+||||||+|++++.++.++++ +||+.|++++.++|..
T Consensus 181 ~~li~Ep~AAa~~~~~~~~-~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~ 259 (409)
T 4gni_A 181 LQLISEPAAAVLAYDARPE-ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLK 259 (409)
T ss_dssp EEEEEHHHHHHHHTTC-------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHhcccc-cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHH
Confidence 4789999999999987652 114578999999999999999999999988876 9999999999999999
Q ss_pred hcc--CCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 043979 70 KHK--IDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSK 147 (443)
Q Consensus 70 ~~~--~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~ 147 (443)
+++ .++..+++.+.+|+.+||++|+.||.+.++.+.++.+.++.++..+|||++|+++++|+++++..+|+++|++++
T Consensus 260 ~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~ 339 (409)
T 4gni_A 260 KNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAG 339 (409)
T ss_dssp HSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTT
T ss_pred HhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 988 888889999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred CCcCCcceEEEecCCcCcHHHHHHHHhhhCCc-cc------cccCCcchhhhhhhhhHHHHHh
Q 043979 148 IDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGK-EL------CKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 148 ~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~-~i------~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
+...+|+.|+||||+|++|+|++.|++.|+.. .+ ..+.||++|||+|||++|+...
T Consensus 340 ~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~ 402 (409)
T 4gni_A 340 LDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQ 402 (409)
T ss_dssp CCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHH
T ss_pred CCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999654 34 6789999999999999999876
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=5.6e-35 Score=295.12 Aligned_cols=200 Identities=59% Similarity=0.961 Sum_probs=188.1
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~~~~ 69 (443)
++|++||+|||++|++.... .+..+||||+||||||++++++.++.++++ +||+.|++++.++|.+
T Consensus 184 ~~li~Ep~Aaa~~~~~~~~~---~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~ 260 (394)
T 3qfu_A 184 LRIVNEPTAAAIAYGLDKSD---KEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKK 260 (394)
T ss_dssp EEEEEHHHHHHHHTTTTSCS---SCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCHHHHHHHHhhccCC---CCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHH
Confidence 46899999999999876643 578999999999999999999999988775 9999999999999999
Q ss_pred hccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 043979 70 KHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSKID 149 (443)
Q Consensus 70 ~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~ 149 (443)
+++.++..+++.+.+|+.+||++|+.||....+.+.++.+.++.++.+.|+|++|+++++++++++..+|+++|+++++.
T Consensus 261 ~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~ 340 (394)
T 3qfu_A 261 KHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLE 340 (394)
T ss_dssp HHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCC
T ss_pred HcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred cCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHh
Q 043979 150 KSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 150 ~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
..+++.|+|+||+|++|+|++.|++.|++.++..+.||++|||+|||++|+.++
T Consensus 341 ~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 341 KKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp GGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 899999999999999999999999999778889999999999999999999764
No 9
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=100.00 E-value=2.8e-34 Score=265.22 Aligned_cols=188 Identities=52% Similarity=0.750 Sum_probs=171.8
Q ss_pred EEEEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCC
Q 043979 214 LLLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGV 293 (443)
Q Consensus 214 ~~~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~ 293 (443)
++.|++|+||||++.+|.|.+|||||++||++++.+|+|..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH------------------Hhhcccc-------
Q 043979 294 PQINVCFDIDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV------------------MRNTVRD------- 348 (443)
Q Consensus 294 ~~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~------------------~r~~l~~------- 348 (443)
++|+|+|.+|.||+|+|++.+..||++.+++|++.. .||++||++|+ .||.++.
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~-~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~ 160 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS-GLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRK 160 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTC-SCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccc-cccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998764 59999999987 2222211
Q ss_pred --hhhhCCCChHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHc
Q 043979 349 --EKFAGKLDPADKQKIEKAIDEAIEWLDGNQLAEVDELEDKLKELEGLCYPIIVKMYE 405 (443)
Q Consensus 349 --~~~~~~~~~~e~~~l~~~~~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e 405 (443)
+.+..++++++++.+..++.++++||+++ +.++|++++++|++.+.||..|+++
T Consensus 161 ~l~~~~~~l~~~~k~~i~~~l~~~~~~L~~~---~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 161 QVEEAGDKLPADDKTAIESALTALETALKGE---DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHGGGSCHHHHHHHHHHHHHHHHHHHSS---CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHhhhhCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12556899999999999999999999987 7899999999999999999999876
No 10
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.9e-33 Score=283.05 Aligned_cols=199 Identities=46% Similarity=0.769 Sum_probs=177.7
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEe----CCeeeeh-----------HHHHHHHHHHHH
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIE----EGIFEVK-----------DFDNRLVNNFVA 65 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~----~~~~~v~-----------d~D~~l~~~l~~ 65 (443)
+++++||+|||++|+..... .+..+||||+||||||++++++. ++.++++ +||+.|++++.+
T Consensus 166 ~~li~Ep~Aaa~~~~~~~~~---~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~ 242 (383)
T 1dkg_D 166 KRIINEPTAAALAYGLDKGT---GNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVE 242 (383)
T ss_dssp SCCCBHHHHHHHHHTCCC-C---CEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHH
T ss_pred EEEeccHHHHHHHHHhccCC---CCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 47899999999999876542 46799999999999999999998 5666553 999999999999
Q ss_pred HHHhhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccC---C-ceEEEEecHHHHHHHHHHHHHHHHHHHHH
Q 043979 66 EFKRKHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYE---G-IDFYATITRARFEVLNMDLFRKCMEHVEK 141 (443)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~---~-~~~~~~itr~efe~l~~~~~~~i~~~i~~ 141 (443)
+|..+++.++..+++.+.+|+.+||++|+.||...+..+.++.+.+ | .++.++|||++|+++++|+++++.++|++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~ 322 (383)
T 1dkg_D 243 EFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKV 322 (383)
T ss_dssp HHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888888999999999999999999998888888876543 3 45678999999999999999999999999
Q ss_pred HHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHh
Q 043979 142 CLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 142 ~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
+|+++++.+.+++.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.++
T Consensus 323 ~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 323 ALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFF-GKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHH-SSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHh-CCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 99999998889999999999999999999999999 46788899999999999999998653
No 11
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.98 E-value=3e-31 Score=247.07 Aligned_cols=186 Identities=35% Similarity=0.589 Sum_probs=170.6
Q ss_pred EEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCCe
Q 043979 216 LDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVPQ 295 (443)
Q Consensus 216 ~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~~ 295 (443)
.|++|++|||++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH-----------------------------Hhhcc
Q 043979 296 INVCFDIDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV-----------------------------MRNTV 346 (443)
Q Consensus 296 i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~-----------------------------~r~~l 346 (443)
|+|+|.+|.||+|+|++.+..+|++..++|++. ..||+++|++|+ +|+.|
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~-~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l 159 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPS-YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL 159 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCC-SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEec-cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999877 459999999887 33344
Q ss_pred cchhhhCCCChHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHccC
Q 043979 347 RDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLAEVDELEDKLKELEGLCYPIIVKMYEGS 407 (443)
Q Consensus 347 ~~~~~~~~~~~~e~~~l~~~~~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~ 407 (443)
++ +..++++++++.+..+++++++||+++ +.++|++++++|++.+.||..|++.++
T Consensus 160 ~~--~~~~~~~~~k~~i~~~l~~~~~wl~~~---d~~~~~~~~~~L~~~~~~i~~r~~~~~ 215 (227)
T 1u00_A 160 AA--DAALLSAAERQVIDDAAAHLSEVAQGD---DVDAIEQAIKNVDKQTQDFAARRMDQS 215 (227)
T ss_dssp HH--HGGGSCHHHHHHHHHHHHHHHHHTTSS---CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hh--hhccCCHHHHHHHHHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32 557899999999999999999999965 689999999999999999999876543
No 12
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.95 E-value=4.9e-27 Score=204.33 Aligned_cols=127 Identities=69% Similarity=1.047 Sum_probs=118.8
Q ss_pred EEEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCC
Q 043979 215 LLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVP 294 (443)
Q Consensus 215 ~~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~ 294 (443)
+.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH
Q 043979 295 QINVCFDIDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV 341 (443)
Q Consensus 295 ~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~ 341 (443)
+|+|+|.+|.||+|+|++.+..||++.+++|+++.++||++||++|+
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~ 128 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMV 128 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHH
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999988889999999986
No 13
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.95 E-value=8.8e-27 Score=202.99 Aligned_cols=127 Identities=71% Similarity=1.041 Sum_probs=122.9
Q ss_pred EEEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCC
Q 043979 215 LLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVP 294 (443)
Q Consensus 215 ~~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~ 294 (443)
+.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH
Q 043979 295 QINVCFDIDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV 341 (443)
Q Consensus 295 ~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~ 341 (443)
+|+|+|.+|.||+|+|++.+..||++.+++|.++.+.||++||++|+
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~ 128 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMV 128 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHH
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999988889999999986
No 14
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.94 E-value=1.8e-26 Score=200.54 Aligned_cols=126 Identities=61% Similarity=0.959 Sum_probs=121.3
Q ss_pred EEEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCC
Q 043979 215 LLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVP 294 (443)
Q Consensus 215 ~~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~ 294 (443)
+.|++|++||+++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH
Q 043979 295 QINVCFDIDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV 341 (443)
Q Consensus 295 ~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~ 341 (443)
+|+|+|.+|.||+|+|++.+..||++.+++|++. ..||++||++|+
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~-~~Ls~~ei~~~~ 127 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSS-GGLSKDQIENMI 127 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECS-SSSCHHHHHHHH
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecC-CCCCHHHHHHHH
Confidence 9999999999999999999999999999999988 789999999987
No 15
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.94 E-value=2.3e-26 Score=205.59 Aligned_cols=160 Identities=53% Similarity=0.786 Sum_probs=133.7
Q ss_pred ccceEEEEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCC
Q 043979 210 VQDLLLLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPA 289 (443)
Q Consensus 210 ~~~~~~~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~ 289 (443)
...+.+.|++|++|||++.+|.|.+|||||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+||+
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHHHhhcccchhhhCCCChHHHHHHHHHHHH
Q 043979 290 PKGVPQINVCFDIDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMVMRNTVRDEKFAGKLDPADKQKIEKAIDE 369 (443)
Q Consensus 290 ~~g~~~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~~r~~l~~~~~~~~~~~~e~~~l~~~~~~ 369 (443)
|+|.++|+|+|.+|.||+|+|++.+..||++.+++|++. ..||++||++|+ +..-+ + ...+..+....++-++
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~-~~Ls~eei~~mi-~~a~~---~--~~eD~~~~~~~e~kn~ 169 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSS-GGLSKDDIENMV-KNAEK---Y--AEEDRRKKERVEAVNM 169 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCC-CCCCHHHHHHHH-HHHHH---S--HHHHHHHHHHHHHHHH
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecC-ccCCHHHHHHHH-HHHHH---H--HHhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 789999999986 11110 0 0011223445566667
Q ss_pred HHHHhcC
Q 043979 370 AIEWLDG 376 (443)
Q Consensus 370 ~~~Wl~~ 376 (443)
++.++|+
T Consensus 170 le~~iy~ 176 (182)
T 3n8e_A 170 AEGIIHD 176 (182)
T ss_dssp HHHHHHC
T ss_pred HHHHHHH
Confidence 7777765
No 16
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.94 E-value=1.5e-26 Score=229.42 Aligned_cols=185 Identities=20% Similarity=0.298 Sum_probs=148.8
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh------HHHHHHHHHHHHHHHhhccCC
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK------DFDNRLVNNFVAEFKRKHKID 74 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~------d~D~~l~~~l~~~~~~~~~~~ 74 (443)
+++++||+|||++|+.... ++..+||||+||||||+++++.......-. +||+.|.+++.+++. .+
T Consensus 126 ~~li~ep~Aaa~~~~~~~~----~~~~~lVvDiGggttdvsv~~~~~~~~~~~~~lGG~~id~~l~~~l~~~~~----~~ 197 (344)
T 1jce_A 126 VFLIEEPMAAAIGSNLNVE----EPSGNMVVDIGGGTTEVAVISLGSIVTWESIRIAGDEMDEAIVQYVRETYR----VA 197 (344)
T ss_dssp EEEEEHHHHHHHHTTCCTT----SSSCEEEEEECSSCEEEEEEETTEEEEEEEESCSHHHHHHHHHHHHHHHHC----EE
T ss_pred EeccCCHHHHHHhcCCCCC----CCceEEEEEeCCCeEEEEEEEcCCEEeeCCCCccChhHHHHHHHHHHHHhC----cc
Confidence 3689999999999987543 367899999999999999998643211111 999999999987653 22
Q ss_pred CccCHHHHHHHHHHHHHHHHHcCCCCc------eeeeec--cccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 043979 75 ISGNARALRRLRTAYERAKRTLSSTKQ------TTIEID--SLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNS 146 (443)
Q Consensus 75 ~~~~~~~~~~L~~~~E~~K~~LS~~~~------~~i~i~--~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a 146 (443)
+. +..||++|+.|+.... ..+.++ ++.+|.++.++|+|++|+++++|+++++.+.|+++|+++
T Consensus 198 ~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~ 268 (344)
T 1jce_A 198 IG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKT 268 (344)
T ss_dssp CC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTS
T ss_pred cC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 21 4679999999987642 234443 445677788999999999999999999999999999987
Q ss_pred CCC--cCCc-ceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHh
Q 043979 147 KID--KSQV-HDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 147 ~~~--~~~i-d~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
+.. .+.+ +.|+|+||+|++|.|++.|++.| +.++..+.||++|||+||+++|..++
T Consensus 269 ~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 269 PPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp CHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred CchhccchhhCcEEEECccccchHHHHHHHHHH-CCCccccCChHHHHHHHHHHHHhChH
Confidence 532 2234 68999999999999999999999 46777888999999999999998655
No 17
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.92 E-value=1.9e-24 Score=188.90 Aligned_cols=127 Identities=63% Similarity=0.965 Sum_probs=121.9
Q ss_pred EEEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCCCCCCC
Q 043979 215 LLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVP 294 (443)
Q Consensus 215 ~~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~ 294 (443)
+.|++|++||+++.+|.|.+||+||++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.|+|++++|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEecCCceEEEEEeeeccCeeeeEEEecCCCCCCHHHHHHHH
Q 043979 295 QINVCFDIDANGILHVSAKDMTVGVKNHITITNDKGRLSKEEIERMV 341 (443)
Q Consensus 295 ~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~~~ls~eei~~~~ 341 (443)
+|+|+|.+|.||+|+|++.+..+|++..++|.+..+.||++||++|+
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~ 128 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMI 128 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHH
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHH
Confidence 99999999999999999999999999999998887789999999986
No 18
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.90 E-value=2.1e-23 Score=177.97 Aligned_cols=120 Identities=61% Similarity=0.899 Sum_probs=109.7
Q ss_pred ccceEEEEecccccceEeecCeeEEEEeCCCCcCcceEEEeeecCCCCccEEEEEeeccccccccCceeeEEEEeCCCCC
Q 043979 210 VQDLLLLDVTPLSLGIETAGGVMTTLIPRNTTIPTKKEEIFSTYSDNQPGVLIQVYEGERARAKYNNLLGKFELMGIPPA 289 (443)
Q Consensus 210 ~~~~~~~d~~~~sigi~~~~~~~~~ii~k~~~iP~~~~~~f~~~~d~q~~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~ 289 (443)
++++.+.|++|++||+++.++.|.+||+||+++|++++.+|++..|+|+.+.|.+|||++..+.+|..||+|.|.|+|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEecCCceEEEEEeeeccCeeeeEEEecCC
Q 043979 290 PKGVPQINVCFDIDANGILHVSAKDMTVGVKNHITITNDK 329 (443)
Q Consensus 290 ~~g~~~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~~~ 329 (443)
++|.++|+|+|++|.||+|+|++.+..||++.+++|+++.
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~ 133 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASS 133 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSC
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCC
Confidence 9999999999999999999999999999999999998763
No 19
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.81 E-value=9.8e-20 Score=184.61 Aligned_cols=173 Identities=17% Similarity=0.190 Sum_probs=133.0
Q ss_pred cccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh--------HHHHHHHHHHHHHHHhhccC
Q 043979 2 RIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK--------DFDNRLVNNFVAEFKRKHKI 73 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~--------d~D~~l~~~l~~~~~~~~~~ 73 (443)
+++.||.|||++|..... ++..++|||+||||||+++++ ++.+... +||+.|+..+.
T Consensus 186 ~lv~ep~Aaa~a~l~~~~----~~~gv~vvDiGggttdisi~~--~g~~~~~~~i~~GG~~it~dIa~~l~--------- 250 (419)
T 4a2a_A 186 QLKSSLVSTAEGVLTTPE----KDRGVVVVNLGYNFTGLIAYK--NGVPIKISYVPVGMKHVIKDVSAVLD--------- 250 (419)
T ss_dssp EEEEHHHHHHHHHCCHHH----HHHCEEEEEECSSSEEEEEEE--TTEEEEEEEESCCHHHHHHHHHHHHT---------
T ss_pred EEEEHHHHHHHHhhcccc----ccCCEEEEEECCCcEEEEEEE--CCEEEEEEecccHHHHHHHHHHHHHC---------
Confidence 588999999999865433 256899999999999999987 4443322 89998876531
Q ss_pred CCccCHHHHHHHHHHHHHHHHHcCCC-----CceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 043979 74 DISGNARALRRLRTAYERAKRTLSST-----KQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSKI 148 (443)
Q Consensus 74 ~~~~~~~~~~~L~~~~E~~K~~LS~~-----~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~ 148 (443)
....+||++|+.++.. .+..+.++.... ....+++|++|.++++|.++++...|++.|+.+++
T Consensus 251 ----------~~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~--~~~~~is~~~l~~ii~p~veei~~~V~~~L~~~~~ 318 (419)
T 4a2a_A 251 ----------TSFEESERLIITHGNAVYNDLKEEEIQYRGLDG--NTIKTTTAKKLSVIIHARLREIMSKSKKFFREVEA 318 (419)
T ss_dssp ----------CCHHHHHHHHHHHCCSCCTTCCCCEEEEECTTS--CSEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ----------CCHHHHHHHHHHhccCcccCCCCceEEEeecCC--ccceEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 1246899999998742 344677765532 35679999999999999999999999999999997
Q ss_pred C------cCCcceEEEecCCcCcHHHHHHHHhhhCCcccc--c---------------cCCcchhhhhhhhhHHHHH
Q 043979 149 D------KSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELC--K---------------SINPDEVVAYGAAVQASIL 202 (443)
Q Consensus 149 ~------~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~--~---------------~~~pdeaVa~GAa~~a~~l 202 (443)
+ ...++.|+|+||+|++|.|++.+++.|+ .++. . ..+|..++|.|.++++...
T Consensus 319 ~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g-~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 319 KIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFK-SPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp CC--------TTCEEEESGGGGSTTHHHHHHHHHT-SCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC----
T ss_pred CcccccccccCCEEEEECchhchhhHHHHHHHHHC-CCeEEEecCCCCchhccCcccccCCchHHHHHHHHHHHhhc
Confidence 3 4568999999999999999999999994 3332 2 1489999999999988643
No 20
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.76 E-value=2.5e-18 Score=172.23 Aligned_cols=153 Identities=16% Similarity=0.169 Sum_probs=102.5
Q ss_pred cccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh--------HHHHHHHHHHHHHHHhhccC
Q 043979 2 RIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK--------DFDNRLVNNFVAEFKRKHKI 73 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~--------d~D~~l~~~l~~~~~~~~~~ 73 (443)
++++||+|||++|+..... ..+..++|||+||||||+++++ .+.+... +||+.|++. ++.
T Consensus 169 ~i~~ep~Aaa~~~~~~~~~--~~~~~~~vvDiGggttdi~i~~--~g~~~~~~~~~~GG~~i~~~i~~~--------~~~ 236 (377)
T 2ych_A 169 VLDVKPFAGLYPLEARLAE--EPDRVFLVLDIGAESTSLVLLR--GDKPLAVRVLTLSGKDFTEAIARS--------FNL 236 (377)
T ss_dssp EEEEHHHHTTGGGHHHHHT--STTCEEEEEEECSSCEEEEEEE--TTEEEEEEEESCSHHHHHHHHHHH--------TTC
T ss_pred EEecchHHHHHHHHhhccc--ccCCeEEEEEECCCcEEEEEEE--CCEEEEEEeeechHHHHHHHHHHH--------hCC
Confidence 5789999999998654322 2357899999999999999987 3322211 899888762 222
Q ss_pred CCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCcC
Q 043979 74 DISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRN--SKIDKS 151 (443)
Q Consensus 74 ~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~--a~~~~~ 151 (443)
+ +.+||++|+.++.............+-......++|++|++++++.++++...|++.|+. ++....
T Consensus 237 ~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~ 305 (377)
T 2ych_A 237 D-----------LLAAEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEA 305 (377)
T ss_dssp C-----------HHHHHHHHHHTC-------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred C-----------HHHHHHHHhhcccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 2 468999999988543221111000111123458899999999999999999999999985 355566
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
.++.|+|+||+|++|.+++.+++.|+
T Consensus 306 ~~~~IvL~GG~s~~p~l~~~l~~~l~ 331 (377)
T 2ych_A 306 SPEVGYLLGGGSKLRGLASLLTDTLG 331 (377)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHT
T ss_pred CcCEEEEECccccchhHHHHHHHHhC
Confidence 89999999999999999999999994
No 21
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.75 E-value=2.9e-18 Score=169.82 Aligned_cols=163 Identities=14% Similarity=0.160 Sum_probs=117.6
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~~~~ 69 (443)
+++++||+|||++| +......+...++||||+||||||++++++.++. .+. +|++.|++++.+
T Consensus 166 v~li~Ep~AAa~~~-l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~---- 239 (346)
T 2fsj_A 166 LIMRPQGVGAALYL-LNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAK---- 239 (346)
T ss_dssp EEEEETTHHHHHHH-HHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHH----
T ss_pred EEEEccHHHHHHHh-hccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHH----
Confidence 36899999999998 3221110234789999999999999999976654 222 777777766555
Q ss_pred hccC--CCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHH-HHHHHHHHHHHHHHHHHHHHHc
Q 043979 70 KHKI--DISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARF-EVLNMDLFRKCMEHVEKCLRNS 146 (443)
Q Consensus 70 ~~~~--~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~ef-e~l~~~~~~~i~~~i~~~l~~a 146 (443)
+|+. ++. ...+| . ...+.+ .+. .++++++ +++++++++++.+.|+++|+++
T Consensus 240 ~~g~~~~i~---------~~~~e-------~--~~~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~ 293 (346)
T 2fsj_A 240 ETGFVVPFD---------LAQEA-------L--SHPVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE 293 (346)
T ss_dssp HHCCCCCHH---------HHHHH-------T--TSCEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HhCCCcCCC---------HHHHh-------c--CCeEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4444 221 11122 1 112333 333 3569999 9999999999999999999876
Q ss_pred CCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccc-cccCCcchhhhhhhhhHHH
Q 043979 147 KIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKEL-CKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 147 ~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i-~~~~~pdeaVa~GAa~~a~ 200 (443)
.++++.|+|+||++++ +++.|++.|+...+ ....||++|+|+|+..++.
T Consensus 294 ---~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 294 ---VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp ---GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHHHHHHHHH
T ss_pred ---hhcccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHHHHHHHHh
Confidence 4578999999999999 99999999963222 1267999999999998764
No 22
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.73 E-value=2.1e-17 Score=157.98 Aligned_cols=141 Identities=23% Similarity=0.382 Sum_probs=117.2
Q ss_pred cccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh--------HHHHHHHHHHHHHHHhhccC
Q 043979 2 RIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK--------DFDNRLVNNFVAEFKRKHKI 73 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~--------d~D~~l~~~l~~~~~~~~~~ 73 (443)
.++.||+|+|++|+.. ..+|+|+||||++++++. .+..... +||+.+.+++. .
T Consensus 124 ~i~~e~~A~a~~~~~~---------~~~viDiGggst~~~~~~--~g~~~~~~~~~~Gg~~~~~~l~~~l~--------~ 184 (272)
T 3h1q_A 124 TLVDEPVAAARALGIN---------DGIVVDIGGGTTGIAVIE--KGKITATFDEPTGGTHLSLVLAGSYK--------I 184 (272)
T ss_dssp EEECHHHHHHHHHTCS---------SEEEEEECSSCEEEEEEE--TTEEEEECCBSCCHHHHHHHHHHHHT--------C
T ss_pred ecccHHHHHHHHHcCC---------CEEEEEECCCcEEEEEEE--CCEEEEEecCCCcHHHHHHHHHHHhC--------C
Confidence 4789999999988642 259999999999999986 3322211 88888877653 1
Q ss_pred CCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCc
Q 043979 74 DISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSKIDKSQV 153 (443)
Q Consensus 74 ~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~i 153 (443)
+ ...+|++|+.++ ++++|++++.++++++...+.+.++..+ ++
T Consensus 185 ~-----------~~~ae~~k~~~~----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~ 227 (272)
T 3h1q_A 185 P-----------FEEAETIKKDFS----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QT 227 (272)
T ss_dssp C-----------HHHHHHHHHSST----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SS
T ss_pred C-----------HHHHHHHHHhcC----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CC
Confidence 1 357888998876 6899999999999999999999998654 47
Q ss_pred ceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHH
Q 043979 154 HDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQA 199 (443)
Q Consensus 154 d~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a 199 (443)
+.|+|+||++++|.+++.+++.| +.++..+.||++++|+|||++|
T Consensus 228 ~~ivL~GG~a~~~~l~~~l~~~l-~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 228 LPVYVVGGTAYLTGFSEEFSRFL-GKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp CCEEEESGGGGSTTHHHHHHHHH-SSCCBCCSSGGGHHHHHHHTTC
T ss_pred CEEEEECCccchhhHHHHHHHHh-CCCccccCChHHHHHHHHHhcC
Confidence 89999999999999999999999 5788889999999999999875
No 23
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.63 E-value=2.7e-16 Score=154.09 Aligned_cols=161 Identities=15% Similarity=0.148 Sum_probs=108.6
Q ss_pred cccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeee------eh-----HHHHHHHHHHHHHHHhh
Q 043979 2 RIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFE------VK-----DFDNRLVNNFVAEFKRK 70 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~------v~-----d~D~~l~~~l~~~~~~~ 70 (443)
++++||.|||++|.... .++..++|+|+||||+|+++++ ++.+. .. +||+.|++++.++
T Consensus 144 ~~~~e~~aa~~~~~~~~----~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~---- 213 (320)
T 2zgy_A 144 KVMPESIPAGYEVLQEL----DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA---- 213 (320)
T ss_dssp EEEESSHHHHHHHHHHS----CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC----
T ss_pred EEecCcHHHHHhhhccc----cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc----
Confidence 57899999999886332 2467999999999999999998 33221 11 9999998888642
Q ss_pred ccCCCccCHHHHHHHHHHHHHH-HHHc-CCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Q 043979 71 HKIDISGNARALRRLRTAYERA-KRTL-SSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSKI 148 (443)
Q Consensus 71 ~~~~~~~~~~~~~~L~~~~E~~-K~~L-S~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~ 148 (443)
+.+++ . ..+|++ |..- .......+.++ -+++++.+++++.++++.+.|.+.+++.
T Consensus 214 -~~~i~--~-------~~ae~~lk~~~~~~~~~~~i~~~-----------~~~~~~~~~i~~~~~~~~~~i~~~i~~~-- 270 (320)
T 2zgy_A 214 -RTKGS--S-------YLADDIIIHRKDNNYLKQRINDE-----------NKISIVTEAMNEALRKLEQRVLNTLNEF-- 270 (320)
T ss_dssp -SBGGG--H-------HHHHHHHHTTTCHHHHHHHSSSS-----------CTHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred -CCCCC--H-------HHHHHHHHHhhhhhcccceecCc-----------hhhHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 33222 1 223433 3220 00000001111 1345666667777777766666666542
Q ss_pred CcCCcceEEEecCCcCcHHHHHHHHhhhCCc--cccccCCcchhhhhhhhhHH
Q 043979 149 DKSQVHDVVLVSGSTRIPKVQQLLQDFFNGK--ELCKSINPDEVVAYGAAVQA 199 (443)
Q Consensus 149 ~~~~id~ViLvGGssr~p~v~~~l~~~f~~~--~i~~~~~pdeaVa~GAa~~a 199 (443)
.+++.|+|+||+|++ +++.|++.|+.. ++....||++|+|+||++++
T Consensus 271 --~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 --SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp --CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred --cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 568999999999997 999999999532 57778999999999999875
No 24
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.59 E-value=2.7e-15 Score=152.26 Aligned_cols=187 Identities=17% Similarity=0.132 Sum_probs=128.5
Q ss_pred CcccchhHHHHHH-hccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeee-----h-----HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIV-YGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEV-----K-----DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~-y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v-----~-----d~D~~l~~~l~~~~~~ 69 (443)
+.+++||+|||++ |...... ..+.+.||||+|+||||++++. ++..-. + +||+.|.++|.+++.
T Consensus 139 ~~l~~ep~aa~~a~~~~~~~~--~~~~~glVvDiG~gtt~v~~v~--~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~- 213 (418)
T 1k8k_A 139 LYIAVQAVLALAASWTSRQVG--ERTLTGTVIDSGDGVTHVIPVA--EGYVIGSCIKHIPIAGRDITYFIQQLLRDREV- 213 (418)
T ss_dssp EEEEEHHHHHHHHGGGSTTCC--SCCCCEEEEEESSSCEEEEEEE--TTEECGGGCEEESCSHHHHHHHHHHHHHTTCC-
T ss_pred EEEechHHHHhhhhhcccccC--CCCCeEEEEEcCCCceEEEEeE--CCEEcccceEEEeCcHHHHHHHHHHHHHhcCC-
Confidence 3689999999987 5321110 1122679999999999999985 332111 1 999999998876431
Q ss_pred hccCCCccCHHHHHHHHHHHHHHHHHcCCCC-----------------ceeeeeccccCCceEEEEecHHHH---HHHHH
Q 043979 70 KHKIDISGNARALRRLRTAYERAKRTLSSTK-----------------QTTIEIDSLYEGIDFYATITRARF---EVLNM 129 (443)
Q Consensus 70 ~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~-----------------~~~i~i~~~~~~~~~~~~itr~ef---e~l~~ 129 (443)
..+... -...+|++|+.++... ...+.+++...+..+.+++++++| |.+++
T Consensus 214 --~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~ 284 (418)
T 1k8k_A 214 --GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFH 284 (418)
T ss_dssp --CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTC
T ss_pred --CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCC
Confidence 111111 1245677787775421 134666665556677899999999 56666
Q ss_pred HHH------HHHHHHHHHHHHHcC--CCcCCcceEEEecCCcCcHHHHHHHHhhhCCc----------------------
Q 043979 130 DLF------RKCMEHVEKCLRNSK--IDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGK---------------------- 179 (443)
Q Consensus 130 ~~~------~~i~~~i~~~l~~a~--~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~---------------------- 179 (443)
|.+ ..+.+.|.++|..+. +.+..++.|+|+||+|++|.++++|++.|+..
T Consensus 285 P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~ 364 (418)
T 1k8k_A 285 PEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPID 364 (418)
T ss_dssp GGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCC
T ss_pred CccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCcee
Confidence 543 568888999998865 34456789999999999999999998766321
Q ss_pred -cccccCCcchhhhhhhhhHHHH
Q 043979 180 -ELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 180 -~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
++..+.+|..++.+||+++|..
T Consensus 365 v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 365 VQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp CCEECCTTCTTHHHHHHHHHTTS
T ss_pred EEEeCCCccccceeHhHHHHHcC
Confidence 2233457789999999999863
No 25
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.57 E-value=3.2e-15 Score=149.66 Aligned_cols=181 Identities=19% Similarity=0.207 Sum_probs=119.1
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeee-----h-----HHHHHHHHHHHHHHHhh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEV-----K-----DFDNRLVNNFVAEFKRK 70 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v-----~-----d~D~~l~~~l~~~~~~~ 70 (443)
+.+++||+|||++|+. .+.||||+|+||||++.+. +|.... + ++|+.|.+++..+.
T Consensus 132 ~~~~~e~~aaa~a~g~---------~~~lVvDiG~gtt~v~~v~--~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~--- 197 (375)
T 2fxu_A 132 MYVAIQAVLSLYASGR---------TTGIVLDSGDGVTHNVPIY--EGYALPHAIMRLDLAGRDLTDYLMKILTERG--- 197 (375)
T ss_dssp EEEEEHHHHHHHHTTC---------SSEEEEEECSSCEEEEEEE--TTEECGGGCEEESCCHHHHHHHHHHHHHHHT---
T ss_pred EEEccchheeeeecCC---------CeEEEEEcCCCceEEeEeE--CCEEeccceEEeccCHHHHHHHHHHHHHhcC---
Confidence 3689999999999873 3689999999999987763 442211 1 99999999887641
Q ss_pred ccCCCccCHHHHHHHHHHH---------HHHHHHcCCCCceeeeeccccCCceEEEEecHHHH---HHHHHHH-----HH
Q 043979 71 HKIDISGNARALRRLRTAY---------ERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARF---EVLNMDL-----FR 133 (443)
Q Consensus 71 ~~~~~~~~~~~~~~L~~~~---------E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~ef---e~l~~~~-----~~ 133 (443)
+......+.....+++..+ +..|..++......+.++ ++. .++|+++.| |.+++|. ..
T Consensus 198 ~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---dg~--~i~i~~erf~~~E~lf~p~~~~~~~~ 272 (375)
T 2fxu_A 198 YSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---DGQ--VITIGNERFRCPETLFQPSFIGMESA 272 (375)
T ss_dssp CCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC--EEEESTHHHHHHHTTTCGGGGTCCSC
T ss_pred CCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---CCC--EEEEChhheechHhhCCCccCCCCCC
Confidence 2111111222233333322 222222333333445554 332 468888888 4455553 24
Q ss_pred HHHHHHHHHHHHcC--CCcCCcceEEEecCCcCcHHHHHHHHhhhCC-------ccccccCCcchhhhhhhhhHHH
Q 043979 134 KCMEHVEKCLRNSK--IDKSQVHDVVLVSGSTRIPKVQQLLQDFFNG-------KELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 134 ~i~~~i~~~l~~a~--~~~~~id~ViLvGGssr~p~v~~~l~~~f~~-------~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
.+.+.|.++|..+. +....++.|+|+||+|++|.++++|++.++. .++..+.+|+.+|++||+++|.
T Consensus 273 ~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 273 GIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp CHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 57788888887653 2233468899999999999999999998742 2345677999999999999997
No 26
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.54 E-value=1.7e-14 Score=119.09 Aligned_cols=93 Identities=47% Similarity=0.816 Sum_probs=59.8
Q ss_pred HhhcccchhhhCCCChHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHccCCCCCCCCCCCCCCC
Q 043979 342 MRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLAEVDELEDKLKELEGLCYPIIVKMYEGSASGDVPMGSSAEMP 421 (443)
Q Consensus 342 ~r~~l~~~~~~~~~~~~e~~~l~~~~~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~~~~~~~~~~~~~~ 421 (443)
+|+.|+++.+..+++++++..|...|+++.+||+.+.+++.++|+.++++|++.+.||..|+++.++ |+ ++++||
T Consensus 21 ~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~~~a~~e~i~~k~~eL~~~~~~i~~k~y~~~~-~~----~~~~~~ 95 (113)
T 3lof_A 21 MKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQGAG-GP----GPGGFG 95 (113)
T ss_dssp HHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHHC---------------
T ss_pred HHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhcc-CC----CCCCCC
Confidence 6777766568889999999999999999999999987789999999999999999999999997543 21 122333
Q ss_pred CCCCCCCCCCCCCCCCCcccCC
Q 043979 422 GGGHGKAETGGAGGGPKIEEVD 443 (443)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~ 443 (443)
++ ..+++++.||||||||
T Consensus 96 ~~----~~~~~~~~gp~~eevd 113 (113)
T 3lof_A 96 AQ----GPKGGSGSGPTIEEVD 113 (113)
T ss_dssp ----------------------
T ss_pred CC----CCCCCCCCCCCCCCCC
Confidence 32 2234456799999998
No 27
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=99.46 E-value=6e-14 Score=115.91 Aligned_cols=103 Identities=51% Similarity=0.855 Sum_probs=63.7
Q ss_pred HHHHHHH--HhhcccchhhhCCCChHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHccCCCCCC
Q 043979 335 EEIERMV--MRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLAEVDELEDKLKELEGLCYPIIVKMYEGSASGDV 412 (443)
Q Consensus 335 eei~~~~--~r~~l~~~~~~~~~~~~e~~~l~~~~~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~~~~~ 412 (443)
.+.+.++ +|+.|.++.+..++++++++.|...|.++.+||+++.+++.++|+.++++|++.+.||..|+++.+ |++
T Consensus 7 N~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~ad~~~i~~~~~~L~~~~~~i~~~~~~~~--~~~ 84 (113)
T 1ud0_A 7 HMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSA--GGM 84 (113)
T ss_dssp HHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS--CCC
T ss_pred HHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhc--cCC
Confidence 3455555 778886545778999999999999999999999865556889999999999999999999998643 434
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCCCcccCC
Q 043979 413 PMGSSAEMPGGGHGKA--ETGGAGGGPKIEEVD 443 (443)
Q Consensus 413 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 443 (443)
+++ |||++++++ .+|++++||||||||
T Consensus 85 ~~~----~~~~~~~~~~~~~~~~~~~~~~ee~d 113 (113)
T 1ud0_A 85 PGG----MPGGFPGGGAPPSGGASSGPTIEEVD 113 (113)
T ss_dssp CCC------------------------------
T ss_pred CCC----CCCCCCCcccCCCCCCCCCCCcccCC
Confidence 443 444433322 224556799999998
No 28
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.44 E-value=1.2e-12 Score=125.32 Aligned_cols=166 Identities=17% Similarity=0.166 Sum_probs=106.2
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh-----------HHHHHHHHHHHHHHHh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK-----------DFDNRLVNNFVAEFKR 69 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~-----------d~D~~l~~~l~~~~~~ 69 (443)
++.||||+|+|+++..... ....|+|+|||+++++++. .++.+.+. +|+..+++++.-.+..
T Consensus 74 ~~~Vne~~aha~a~~~~~~------~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~ 146 (276)
T 4ehu_A 74 DKQISELSCHARGVNFIIP------ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSE 146 (276)
T ss_dssp SEECCHHHHHHHHHHHHST------TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGG
T ss_pred CcccchHHHHHHHHHHhCC------CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhh
Confidence 3679999999988765443 3457899999999999885 44555443 7888888776443321
Q ss_pred hccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEE------EEecHHHHHHHHHHHHHHHHHHHHHHH
Q 043979 70 KHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFY------ATITRARFEVLNMDLFRKCMEHVEKCL 143 (443)
Q Consensus 70 ~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~------~~itr~efe~l~~~~~~~i~~~i~~~l 143 (443)
.. .+ .+..... ..+.+. ...|. ..-.....++++..+.+.+.+.+....
T Consensus 147 ~~------------~~---------~~~a~~~--~~i~~~--~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~ 201 (276)
T 4ehu_A 147 LG------------SI---------SMNSQNE--VSISST--CTVFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLV 201 (276)
T ss_dssp HH------------HH---------HTTCSSC--CCCCCC--SHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hH------------HH---------HhcCCCC--CCcCCc--cchhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHH
Confidence 10 00 0000000 000000 00000 000001124566666666665555544
Q ss_pred HHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHh
Q 043979 144 RNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 144 ~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
... ..++.|+|+||.+++|.||+.+++.| +.++..+.||++++|+|||++|....
T Consensus 202 ~~~----~~~~~vvl~GGva~n~~lr~~l~~~~-g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 202 KRI----GVQRNVVMVGGVARNSGIVRAMAREI-NTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHH----CCCSSEEEESGGGGCHHHHHHHHHHH-TSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred Hhc----ccCCeEEEecCccchHHHHHHHHHHH-CCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 433 35789999999999999999999999 68899999999999999999997554
No 29
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=99.40 E-value=4.2e-13 Score=111.92 Aligned_cols=91 Identities=48% Similarity=0.868 Sum_probs=57.9
Q ss_pred HhhcccchhhhCCCChHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhHHHHHHHHHccCCCCCCCCCCCCCCC
Q 043979 342 MRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQLAEVDELEDKLKELEGLCYPIIVKMYEGSASGDVPMGSSAEMP 421 (443)
Q Consensus 342 ~r~~l~~~~~~~~~~~~e~~~l~~~~~~~~~Wl~~~~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~~~~~~~~~~~~~~ 421 (443)
+++.|.++.+..++++++++.|..+|.++.+||+++.+++.++|+.++++|++.+.||..|+++.+ |+++
T Consensus 30 ~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~~~ad~e~ik~k~~eL~~~~~~i~~k~y~~~--~~~~-------- 99 (120)
T 2p32_A 30 LKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSA--GGAP-------- 99 (120)
T ss_dssp HHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCC---------------
T ss_pred HHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCC--------
Confidence 778886545777899999999999999999999876678999999999999999999999988532 3222
Q ss_pred CCCCCCCCCCCCCCCCCcccCC
Q 043979 422 GGGHGKAETGGAGGGPKIEEVD 443 (443)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~ 443 (443)
++ ||+++.|++++||||||||
T Consensus 100 ~~-~~~~~~~~~~~~~~~ee~d 120 (120)
T 2p32_A 100 PG-AAPGGAAGGAGGPTIEEVD 120 (120)
T ss_dssp ----------------------
T ss_pred CC-CCCCCCCCCCCCCCCCCCC
Confidence 22 1112224556799999998
No 30
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.35 E-value=1.4e-12 Score=129.21 Aligned_cols=166 Identities=14% Similarity=0.233 Sum_probs=109.7
Q ss_pred CcccchhHHHHHHhccccCcCC--CCCcEEEEEEeCCceeEEEEEEEeCCeee------eh----HHHHHHHHHHHHHHH
Q 043979 1 MRIINEPAAATIVYGLDKKASR--TGEKNVLIFDLGGGTFDVSLLMIEEGIFE------VK----DFDNRLVNNFVAEFK 68 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~--~~~~~vlV~D~GggT~Dvsv~~~~~~~~~------v~----d~D~~l~~~l~~~~~ 68 (443)
+.+++||.||+++|........ -++..+||+|+||||||++++ .++.+. +. .+++.+.+++.+++.
T Consensus 157 V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGggTtd~~v~--~~~~~~~~~s~s~~~G~~~~~~~i~~~l~~~~~ 234 (355)
T 3js6_A 157 VKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGSGTTIIDTY--QNMKRVEEESFVINKGTIDFYKRIASHVSKKSE 234 (355)
T ss_dssp EEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECSSCEEEEEE--ETTEECGGGCEEESCCHHHHHHHHHHHTC----
T ss_pred EEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCCCcEEEEEE--cCCEEccccccCcchHHHHHHHHHHHHHHHhcC
Confidence 3579999999999876542100 036899999999999999998 344331 11 889999888876531
Q ss_pred hhccCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCce--EEEEecHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 043979 69 RKHKIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGID--FYATITRARFEVLNMDLFRKCMEHVEKCLRNS 146 (443)
Q Consensus 69 ~~~~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~--~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a 146 (443)
+.++. .. ..++-+. ... .+.+ -.+.+ .+.+++.++++++++.+.|++.+.+
T Consensus 235 ---g~~l~--~~-------~i~~g~~---------~~~----~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~- 287 (355)
T 3js6_A 235 ---GASIT--PR-------MIEKGLE---------YKQ----CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN- 287 (355)
T ss_dssp -------C--HH-------HHHSCCC--------------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred ---CCcCC--HH-------HHhcCCc---------ccc----ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence 22222 11 1111110 000 0110 01122 3467788888888888888888764
Q ss_pred CCCcCCcceEEEecCCcCcHH--HHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHh
Q 043979 147 KIDKSQVHDVVLVSGSTRIPK--VQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 147 ~~~~~~id~ViLvGGssr~p~--v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
++.++.|+|+||++.++. |++.+++.|+.. .||..|+|+|+..++..+.
T Consensus 288 ---~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~-----~~p~~anA~G~~~~~~~~~ 338 (355)
T 3js6_A 288 ---INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA-----DDSQFSNVRGYEKLGELLK 338 (355)
T ss_dssp ---TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC-----SSGGGHHHHHHHHHHHHHH
T ss_pred ---hhhccEEEEECcchhcchhhHHHHHHHHCCCC-----CCcHHHHHHHHHHHHHHHH
Confidence 466899999999999998 889999988432 8999999999999998776
No 31
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.18 E-value=7.5e-11 Score=115.67 Aligned_cols=164 Identities=15% Similarity=0.208 Sum_probs=110.9
Q ss_pred cccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeee-----eh-----HHHHHHHHHHHHHHHhhc
Q 043979 2 RIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFE-----VK-----DFDNRLVNNFVAEFKRKH 71 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~-----v~-----d~D~~l~~~l~~~~~~~~ 71 (443)
.+++||.+|.+.+. .. .++..++|+|+||||||+++++ ++.+. .+ ++++.|.+++.+ .+|
T Consensus 153 ~v~pe~~ga~~~~~--~~---~~~~~v~vvDiGggTtd~~v~~--~g~~~~~~~~~~~~G~~~~~~~i~~~l~~---~~~ 222 (329)
T 4apw_A 153 TIKAEGSGVLFLEQ--EN---FKNKNVAVIDFGGLNMGFSLYR--NCVVNPSERFIEEHGVKDLIIRVGDALTD---LNN 222 (329)
T ss_dssp EEEEHHHHHHHHSC--CC---CTTCEEEEEEECSSCEEEEEEE--TTEECGGGCEEESCCHHHHHHHHHTSSSS---CSS
T ss_pred EEEeccHHHHhhcc--hh---hccCCEEEEEeCCCcEEEEEEE--CCEEeeccccchhhHHHHHHHHHHHHHHh---hcc
Confidence 46788888877652 11 2468999999999999999998 33221 11 777777765543 044
Q ss_pred cCCCccCHHHHHHHHHHHHHHHHHcCCCCceeeeeccccCCceEEEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcC
Q 043979 72 KIDISGNARALRRLRTAYERAKRTLSSTKQTTIEIDSLYEGIDFYATITRARFEVLNMDLFRKCMEHVEKCLRNSKIDKS 151 (443)
Q Consensus 72 ~~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~~i~i~~~~~~~~~~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~ 151 (443)
+..+... .+|++|+. . .. . .+.+. ..++.+++++.++++++++.+.|++. +..++
T Consensus 223 g~~i~~~---------~~e~i~~~--g--~~--~-----~g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~ 277 (329)
T 4apw_A 223 GNLITNE---------QAESALNN--G--YM--K-----KGGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLD 277 (329)
T ss_dssp CSCTTSB---------TTTTCSSS--C--SS--C-----EECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTT
T ss_pred CCCCCHH---------HHHHHHhc--C--Cc--c-----cCCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHH
Confidence 4443321 22333332 1 00 0 01111 13467888888888888888888776 24455
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHh
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
.++.|+|+||++.+ +.+.+++.|+ ..+....||..|+|+|+..++....
T Consensus 278 ~~~~IvltGGGA~l--~~~~l~~~~~-~~v~v~~~P~~a~a~G~~~~~~~k~ 326 (329)
T 4apw_A 278 QLDSLIFIGGTTQK--LKEQISKTYP-NNSIITNNSQWTTCEGLYKVAVAKY 326 (329)
T ss_dssp SCSEEEEESTTHHH--HHHHHHHHST-TCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HccEEEEECChHHH--HHHHHHHHcC-CCCEecCCChhhHHHHHHHHHhhhh
Confidence 68999999999997 6799999995 4567788999999999999887654
No 32
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.08 E-value=1.2e-10 Score=116.97 Aligned_cols=174 Identities=18% Similarity=0.193 Sum_probs=82.7
Q ss_pred CcccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeee-----eh-----HHHHHHHHHHHHHHHhh
Q 043979 1 MRIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFE-----VK-----DFDNRLVNNFVAEFKRK 70 (443)
Q Consensus 1 l~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~-----v~-----d~D~~l~~~l~~~~~~~ 70 (443)
+.+++||+|||++++. .+.+|+|+|+|||+++.+. +|..- .+ ++|+.|.++|..+.
T Consensus 136 ~~~~~~~~~a~~a~g~---------~~~lVVDiG~g~T~v~pv~--~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~--- 201 (394)
T 1k8k_B 136 VYVAIQAVLTLYAQGL---------LTGVVVDSGDGVTHICPVY--EGFSLPHLTRRLDIAGRDITRYLIKLLLLRG--- 201 (394)
T ss_dssp ---------------------------CCEEEECSSCEEEECEE--TTEECSTTCEEESCCHHHHHHHHHHHHHHTT---
T ss_pred EEEEhhHHHHHHhCCC---------ceEEEEEcCCCceEeeeeE--CCEEcccceEEeeccHHHHHHHHHHHHHhcC---
Confidence 3578999999998763 3579999999999998764 33221 11 89999988886531
Q ss_pred ccCCCccCHHHHHHHHHHHHHHHHHcCCC----------------CceeeeeccccCCceEEEEecHHHH---HHHHHHH
Q 043979 71 HKIDISGNARALRRLRTAYERAKRTLSST----------------KQTTIEIDSLYEGIDFYATITRARF---EVLNMDL 131 (443)
Q Consensus 71 ~~~~~~~~~~~~~~L~~~~E~~K~~LS~~----------------~~~~i~i~~~~~~~~~~~~itr~ef---e~l~~~~ 131 (443)
+......+. ..+|.+|+.++.- ....+.++ ++. .++|+++.| |.+++|-
T Consensus 202 ~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp---dg~--~i~i~~erf~~~E~Lf~p~ 269 (394)
T 1k8k_B 202 YAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP---DGR--IIKVGGERFEAPEALFQPH 269 (394)
T ss_dssp CCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---TSC--EEEECTHHHHTGGGGTCGG
T ss_pred CCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC---CCC--EEEECchhhcChHhhCCch
Confidence 222111222 2345555544321 11223333 333 467788877 3344442
Q ss_pred -----HHHHHHHHHHHHHHcCCC--cCCcceEEEecCCcCcHHHHHHHHhhhCC------------------ccccccCC
Q 043979 132 -----FRKCMEHVEKCLRNSKID--KSQVHDVVLVSGSTRIPKVQQLLQDFFNG------------------KELCKSIN 186 (443)
Q Consensus 132 -----~~~i~~~i~~~l~~a~~~--~~~id~ViLvGGssr~p~v~~~l~~~f~~------------------~~i~~~~~ 186 (443)
...+.+.|.+.|.++... ..-.+.|+|+||+|++|.+.++|++.+.. .++..+.+
T Consensus 270 ~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~ 349 (394)
T 1k8k_B 270 LINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPR 349 (394)
T ss_dssp GGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC-------
T ss_pred hccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCC
Confidence 234677788888877432 33457899999999999999999887732 12233567
Q ss_pred cchhhhhhhhhHHH
Q 043979 187 PDEVVAYGAAVQAS 200 (443)
Q Consensus 187 pdeaVa~GAa~~a~ 200 (443)
|..++.+||+++|.
T Consensus 350 ~~~~~w~Ggsilas 363 (394)
T 1k8k_B 350 RKHMVFLGGAVLAD 363 (394)
T ss_dssp --------------
T ss_pred cceeEEhhhHHhhC
Confidence 78999999999886
No 33
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=98.90 E-value=1e-09 Score=111.38 Aligned_cols=171 Identities=20% Similarity=0.218 Sum_probs=106.1
Q ss_pred chhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh------HHHHHHHHHHHHHHHhhccCCCccC
Q 043979 5 NEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK------DFDNRLVNNFVAEFKRKHKIDISGN 78 (443)
Q Consensus 5 ~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~------d~D~~l~~~l~~~~~~~~~~~~~~~ 78 (443)
-||.||+++...+... +..++++||||||||+|++.-..-.+... .+...|..-|. + + +
T Consensus 392 ~ep~AA~laaLTedE~----elGvaiIDmGgGTTd~sVf~~g~lv~a~~ip~gG~~VT~DIA~~Lg--------~--~-d 456 (607)
T 1nbw_A 392 VEANMAIAGALTTPGC----AAPLAILDLGAGSTDAAIVNAEGQITAVHLAGAGNMVSLLIKTELG--------L--E-D 456 (607)
T ss_dssp CHHHHHHHHHTTSTTC----CSSEEEEEECSSEEEEEEECSSSCEEEEEEECCHHHHHHHHHHHHT--------C--S-C
T ss_pred ccHHHhhhhhcCCCCC----cCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHHHHHhC--------C--C-C
Confidence 4899999988665543 67899999999999999977444433322 34443333221 1 1 0
Q ss_pred HHHHHHHHHHHHHHHHHcCCC----------Cceeeee--cccc----CC-----ceEEEEecHHH--HHHHHHHHHHHH
Q 043979 79 ARALRRLRTAYERAKRTLSST----------KQTTIEI--DSLY----EG-----IDFYATITRAR--FEVLNMDLFRKC 135 (443)
Q Consensus 79 ~~~~~~L~~~~E~~K~~LS~~----------~~~~i~i--~~~~----~~-----~~~~~~itr~e--fe~l~~~~~~~i 135 (443)
+..||++|+ .... ..-.+.+ +.+. .- .+.-..| +.. +|+ ++-+-+++
T Consensus 457 -------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~a 526 (607)
T 1nbw_A 457 -------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPI-DNASPLEK-IRLVRRQA 526 (607)
T ss_dssp -------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHH
T ss_pred -------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHH
Confidence 246778887 4321 1113344 2221 11 0111245 555 666 55555554
Q ss_pred HHH--HHHHHHHcCCC-----cCCcceEEEecCCcCcHHHHHHHHhhhCC-c------cccccCCcchhhhhhhhhHHH
Q 043979 136 MEH--VEKCLRNSKID-----KSQVHDVVLVSGSTRIPKVQQLLQDFFNG-K------ELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 136 ~~~--i~~~l~~a~~~-----~~~id~ViLvGGssr~p~v~~~l~~~f~~-~------~i~~~~~pdeaVa~GAa~~a~ 200 (443)
.+. +...|+..+.. ..+|..|+|+||+|.+|-+.++.++.|+. . .....-+|..|+|.|.++|.+
T Consensus 527 k~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 527 KEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp HHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred hhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 443 45557776542 34679999999999999999999999954 1 112245899999999997653
No 34
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=98.88 E-value=9.3e-10 Score=111.23 Aligned_cols=171 Identities=22% Similarity=0.244 Sum_probs=104.2
Q ss_pred chhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeeeeh------HHHHHHHHHHHHHHHhhccCCCccC
Q 043979 5 NEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFEVK------DFDNRLVNNFVAEFKRKHKIDISGN 78 (443)
Q Consensus 5 ~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~v~------d~D~~l~~~l~~~~~~~~~~~~~~~ 78 (443)
-||.||+++...+... +..++++||||||||+|++.-..-.+... .+...|..-|. ++ +
T Consensus 390 ~ep~AAglaaLTeDE~----eLGvaiIDmGGGTTd~sVf~~G~lv~a~~ip~gG~~VT~DIA~~Lg--------t~---d 454 (610)
T 2d0o_A 390 AEAEAAILGALTTPGT----TRPLAILDLGAGSTDASIINPKGDIIATHLAGAGDMVTMIIARELG--------LE---D 454 (610)
T ss_dssp EHHHHHHHHHTTSTTC----CSSEEEEEECSSEEEEEEECTTCCEEEEEEECSHHHHHHHHHHHHT--------CC---C
T ss_pred ccHHHhhhhhcCCCCC----cCCeEEEEeCCCcceEEEEcCCcEEEEEEeccchHHHHHHHHHHhC--------CC---C
Confidence 4899999988665543 67899999999999999976444333322 34443333221 11 0
Q ss_pred HHHHHHHHHHHHHHHHHcCCC----------Cceeeee--cccc----CC-----ceEEEEecHHH--HHHHHHHHHHHH
Q 043979 79 ARALRRLRTAYERAKRTLSST----------KQTTIEI--DSLY----EG-----IDFYATITRAR--FEVLNMDLFRKC 135 (443)
Q Consensus 79 ~~~~~~L~~~~E~~K~~LS~~----------~~~~i~i--~~~~----~~-----~~~~~~itr~e--fe~l~~~~~~~i 135 (443)
+..||++|+ .... ..-.+.+ +.+. .- .+.-..| +.. +|+ ++-+-+++
T Consensus 455 -------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~a 524 (610)
T 2d0o_A 455 -------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKADELVPL-PGDLALEK-VRAIRRSA 524 (610)
T ss_dssp -------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTCEEEECSSCEEEC-CTTCCHHH-HHHHHHHH
T ss_pred -------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHH
Confidence 246778887 4321 1113344 2221 11 0111345 555 666 55555554
Q ss_pred HHH--HHHHHHHcCC-----CcCCcceEEEecCCcCcHHHHHHHHhhhCCcc-------ccccCCcchhhhhhhhhHHH
Q 043979 136 MEH--VEKCLRNSKI-----DKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKE-------LCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 136 ~~~--i~~~l~~a~~-----~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~-------i~~~~~pdeaVa~GAa~~a~ 200 (443)
.+. +...|+..+. +..+|..|+|+||+|.+|-+.++.++.|+.-. ....-+|..|+|.|.++|.+
T Consensus 525 k~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 525 KERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp HHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred hhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 443 2333554322 24567999999999999999999999995402 12245899999999998764
No 35
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.30 E-value=2.4e-07 Score=93.79 Aligned_cols=184 Identities=17% Similarity=0.127 Sum_probs=105.7
Q ss_pred cccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCeee--e--h-----HHHHHHHHHHHHHHHhhcc
Q 043979 2 RIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIFE--V--K-----DFDNRLVNNFVAEFKRKHK 72 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~~--v--~-----d~D~~l~~~l~~~~~~~~~ 72 (443)
-++.+|.+|+++.+...... ....+-||+|+|+|+|+|+.+. .+..+. + + ++++.|.++|..+...
T Consensus 156 ~l~~~~vla~~a~G~~~~~~-~~~~tglVVDiG~g~T~v~PV~-~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~--- 230 (427)
T 3dwl_A 156 YIAVQAVLALAASWTSSKVT-DRSLTGTVVDSGDGVTHIIPVA-EGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEP--- 230 (427)
T ss_dssp EEEEHHHHHHHGGGGSTTTC-SCCCCEEEEEESSSCEEEEEEE-TTEECGGGCEEESCCHHHHHHHHHHTTC--------
T ss_pred eecchHHHHHHhcCCccccc-CCCceEEEEECCCCceEEEEEE-CCEEehhhheeccccHHHHHHHHHHHHHHcCCC---
Confidence 46789999998877532110 1135689999999999999983 322111 1 1 8888887776553321
Q ss_pred CCCccCHHHHHHHHHHHHHHHHHcCCCCce-----------eeeec--cc--cCCceEEEEecHHHH---HHHHHHH---
Q 043979 73 IDISGNARALRRLRTAYERAKRTLSSTKQT-----------TIEID--SL--YEGIDFYATITRARF---EVLNMDL--- 131 (443)
Q Consensus 73 ~~~~~~~~~~~~L~~~~E~~K~~LS~~~~~-----------~i~i~--~~--~~~~~~~~~itr~ef---e~l~~~~--- 131 (443)
.. =...+|.+|+.++.-... ...+. .+ .+|..+.++|..+.| |.+++|-
T Consensus 231 ---~~-------~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g 300 (427)
T 3dwl_A 231 ---DS-------SLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIAS 300 (427)
T ss_dssp -------------CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTC
T ss_pred ---ch-------hHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcC
Confidence 00 113455556555432100 00010 01 234444567777776 4455552
Q ss_pred ---HHHHHHHHHHHHHHcCCC--cCCcceEEEecCCcCcHHHHHHHHhhhCC---------------------ccccccC
Q 043979 132 ---FRKCMEHVEKCLRNSKID--KSQVHDVVLVSGSTRIPKVQQLLQDFFNG---------------------KELCKSI 185 (443)
Q Consensus 132 ---~~~i~~~i~~~l~~a~~~--~~~id~ViLvGGssr~p~v~~~l~~~f~~---------------------~~i~~~~ 185 (443)
...+.+.|.+.|.++..+ +.-...|+|+||+|.+|.+.++|++.+.. .++..+.
T Consensus 301 ~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~ 380 (427)
T 3dwl_A 301 SDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHK 380 (427)
T ss_dssp SSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCT
T ss_pred CccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCC
Confidence 234777777777765421 12246699999999999999999875511 1233445
Q ss_pred CcchhhhhhhhhHHH
Q 043979 186 NPDEVVAYGAAVQAS 200 (443)
Q Consensus 186 ~pdeaVa~GAa~~a~ 200 (443)
++..++=+|++++|.
T Consensus 381 ~r~~s~WiGGSilas 395 (427)
T 3dwl_A 381 RQRNAVWFGGSLLAQ 395 (427)
T ss_dssp TCTTHHHHHHHHHHH
T ss_pred ccccceecCceeecc
Confidence 677899999999986
No 36
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.06 E-value=3.4e-05 Score=73.02 Aligned_cols=73 Identities=25% Similarity=0.169 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHH
Q 043979 125 EVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASIL 202 (443)
Q Consensus 125 e~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l 202 (443)
++++..+++.+...+.++++..++ .+.|+++||.++.|.+++.+.+.+ +.++..+.+|+.+.|+|||++|...
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~l-g~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGL-GVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHH-CSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHH-CCCeEeCCCcchHhHHHHHHHHHHh
Confidence 344444555554444455543321 378999999999999999999999 5778788888889999999999754
No 37
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=3.4e-05 Score=79.08 Aligned_cols=66 Identities=21% Similarity=0.306 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHcCCCc--CCcceEEEecCCcCcHHHHHHHHhhh----CCc--ccccc---CCcchhhhhhhhhHHH
Q 043979 135 CMEHVEKCLRNSKIDK--SQVHDVVLVSGSTRIPKVQQLLQDFF----NGK--ELCKS---INPDEVVAYGAAVQAS 200 (443)
Q Consensus 135 i~~~i~~~l~~a~~~~--~~id~ViLvGGssr~p~v~~~l~~~f----~~~--~i~~~---~~pdeaVa~GAa~~a~ 200 (443)
|-+.+.+.+.++..+. .-...|+|+||+|.+|.+.++|.+.+ +.. ++..+ .++..++=+|++++|.
T Consensus 394 i~e~i~~sI~~cd~d~r~~L~~nIvLsGGst~~pGf~~Rl~~El~~l~p~~~i~v~~~~~~~er~~s~WiGgsilas 470 (498)
T 3qb0_A 394 LADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRILTTGHTIERQYQSWLGGSILTS 470 (498)
T ss_dssp HHHHHHHHHHTSCTTTHHHHHTTEEEESGGGGSTTHHHHHHHHHHHHSTTSCCCEECCSCTGGGGSHHHHHHHHHHT
T ss_pred chHHHHHHHHhCCHHHHHHHhcCEEEeCCccCchhHHHHHHHHHHHhCCCCeeEEEcCCCCCccCccEEcccEEEec
Confidence 3455556665554321 12467999999999999999998755 211 23333 4566888899998884
No 38
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.98 E-value=0.0064 Score=59.36 Aligned_cols=47 Identities=17% Similarity=0.032 Sum_probs=41.0
Q ss_pred cceEEEecC-CcCcHHHHHHHHhhhC-----CccccccCCcchhhhhhhhhHH
Q 043979 153 VHDVVLVSG-STRIPKVQQLLQDFFN-----GKELCKSINPDEVVAYGAAVQA 199 (443)
Q Consensus 153 id~ViLvGG-ssr~p~v~~~l~~~f~-----~~~i~~~~~pdeaVa~GAa~~a 199 (443)
++.|+++|| .+..|.+++.|++.++ +.++..+.+|..+-|.|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 557999999 9999999999999862 4577888899999999999875
No 39
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=96.87 E-value=0.0063 Score=63.81 Aligned_cols=49 Identities=22% Similarity=0.345 Sum_probs=36.8
Q ss_pred cceEEEecCCcCcHHHHHHHHhhhCC------------cccccc---CCcchhhhhhhhhHHHH
Q 043979 153 VHDVVLVSGSTRIPKVQQLLQDFFNG------------KELCKS---INPDEVVAYGAAVQASI 201 (443)
Q Consensus 153 id~ViLvGGssr~p~v~~~l~~~f~~------------~~i~~~---~~pdeaVa~GAa~~a~~ 201 (443)
...|+|+||+|.+|.+.++|.+.+.. .++..+ .+|..++=+||+++|..
T Consensus 501 ~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~~~d~~~~aW~GgSilasL 564 (593)
T 4fo0_A 501 YSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPKDMDPRLIAWKGGAVLACL 564 (593)
T ss_dssp HHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGGGCCTTTHHHHHHHHHHHC
T ss_pred hCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCCCCCCceeeehhhHHHhcC
Confidence 46799999999999999999876521 122222 37788899999999863
No 40
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.68 E-value=0.004 Score=64.88 Aligned_cols=85 Identities=12% Similarity=0.176 Sum_probs=62.6
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhh
Q 043979 118 TITRARFEVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAV 197 (443)
Q Consensus 118 ~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~ 197 (443)
.-+|.++-.++.-+++.+.-.++..++...-....++.|.++||.++.|.+.+.+.+.| +.++..+ ...|+.|+|||+
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~-g~pV~~~-~~~e~~alGAA~ 485 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANAT-GCAMLLP-EESEAMLLGSAM 485 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHH-CCEEEEE-SCSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhh-CCeEEec-CCCcchHHHHHH
Confidence 34788886556666666665555554432212235889999999999999999999999 5666554 456899999999
Q ss_pred HHHHHhC
Q 043979 198 QASILSG 204 (443)
Q Consensus 198 ~a~~l~~ 204 (443)
.|+.-.|
T Consensus 486 lA~~a~G 492 (554)
T 3l0q_A 486 MGTVAAG 492 (554)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9987664
No 41
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.66 E-value=0.0029 Score=64.74 Aligned_cols=81 Identities=20% Similarity=0.166 Sum_probs=56.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHH
Q 043979 120 TRARFEVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQA 199 (443)
Q Consensus 120 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a 199 (443)
+|.++ ++-+++.+.-.++.+++...-....++.|.++||.++.+.+.+.+.+.| +.++..+..++.+.|+|||+.|
T Consensus 357 ~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 357 GPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADIS-GQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHH-CCCEEEESCTTSCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHh-CCeEEeCCCCCcccHHHHHHHH
Confidence 45444 4445555544444444433211234788999999999999999999999 5777766555556999999999
Q ss_pred HHHhC
Q 043979 200 SILSG 204 (443)
Q Consensus 200 ~~l~~ 204 (443)
+.-.|
T Consensus 433 ~~~~g 437 (484)
T 2itm_A 433 QIAAN 437 (484)
T ss_dssp HHHHC
T ss_pred HHHcC
Confidence 87664
No 42
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.55 E-value=0.0054 Score=63.02 Aligned_cols=76 Identities=16% Similarity=0.153 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhC
Q 043979 126 VLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSG 204 (443)
Q Consensus 126 ~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~ 204 (443)
.+++-+++.+.-.++..++...-.. .++.|.++||.++.|++.+.+.+.| +.++..+ .+.|+.|+|||+.|+.-.|
T Consensus 368 ~l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 368 HLARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADIL-NRKVIRP-VVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhc-CCeEEEc-CCCcchHHHHHHHHHHHhC
Confidence 3455566666666666666544333 5789999999999999999999999 5666554 4456999999999986654
No 43
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.54 E-value=0.0054 Score=63.64 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhC
Q 043979 125 EVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSG 204 (443)
Q Consensus 125 e~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~ 204 (443)
..+++-+++.+.-.++..++..+.....++.|.++||.++.|++.+++.+.| +.++..+ .+.|+.|+|||+.|+.-.|
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVF-DAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHH-TSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHh-CCceEec-CCCCchHHHHHHHHHHHhC
Confidence 4566666777766666777766544456789999999999999999999999 5666543 5678999999999986553
No 44
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.54 E-value=0.0052 Score=63.33 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=58.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHH
Q 043979 120 TRARFEVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQA 199 (443)
Q Consensus 120 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a 199 (443)
+|.+| ++-+++.+.-.++..++...- .. ++.|.++||.++.|.+.+.+.+.| +.++.....+.|+.|+|||+.|
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNL-NVSLLVKPDAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHH-TCEEEECCCGGGHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHH-CCeeEEecCCCCchHHHHHHHH
Confidence 45544 455555555555555554332 34 889999999999999999999999 5666234468999999999999
Q ss_pred HHHhC
Q 043979 200 SILSG 204 (443)
Q Consensus 200 ~~l~~ 204 (443)
+.-.|
T Consensus 449 ~~a~G 453 (511)
T 3hz6_A 449 AVELE 453 (511)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 87664
No 45
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.32 E-value=0.011 Score=56.15 Aligned_cols=76 Identities=13% Similarity=0.032 Sum_probs=53.8
Q ss_pred ecHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecC-CcCcHHHHHHHHhhh--CCccccccCCcchhhhhh
Q 043979 119 ITRARFEV-LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSG-STRIPKVQQLLQDFF--NGKELCKSINPDEVVAYG 194 (443)
Q Consensus 119 itr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGG-ssr~p~v~~~l~~~f--~~~~i~~~~~pdeaVa~G 194 (443)
.+++++-. ++.-+.+++........+..+ ++.|+++|| .+..|.+++.+++.+ .+.++..+.+|..+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 35555433 334444444444443333333 557999999 899999999999974 467888899999999999
Q ss_pred hhhHH
Q 043979 195 AAVQA 199 (443)
Q Consensus 195 Aa~~a 199 (443)
||+++
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 46
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.32 E-value=0.008 Score=61.83 Aligned_cols=80 Identities=11% Similarity=0.095 Sum_probs=55.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHH
Q 043979 120 TRARFEVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQA 199 (443)
Q Consensus 120 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a 199 (443)
+|.+| ++-+++.+.-.++..++...-....++.|.++||.++.|.+.+.+.+.| +.++..+ .+.|+.|+|||+.|
T Consensus 364 ~~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA 438 (504)
T 3ll3_A 364 QKPEM---ARAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIF-NVPIVTM-KEQQSGTLAAMFLA 438 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhh-CCeEEec-CCCCchhHHHHHHH
Confidence 45544 4445555544444443332111125889999999999999999999999 5666553 46779999999999
Q ss_pred HHHhC
Q 043979 200 SILSG 204 (443)
Q Consensus 200 ~~l~~ 204 (443)
+.-.|
T Consensus 439 ~~a~G 443 (504)
T 3ll3_A 439 RQALG 443 (504)
T ss_dssp HHHTT
T ss_pred HHHcC
Confidence 87664
No 47
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.29 E-value=0.0059 Score=62.98 Aligned_cols=77 Identities=21% Similarity=0.351 Sum_probs=54.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHH---HHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhh
Q 043979 120 TRARFEVLNMDLFRKCMEHVEK---CLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAA 196 (443)
Q Consensus 120 tr~efe~l~~~~~~~i~~~i~~---~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa 196 (443)
+|.++ ++-+++.+.-.++. .|++.+. .++.|.++||.++.|++.+++.+.| +.++..+ .+.|+.|+|||
T Consensus 395 ~~~~l---~RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA 466 (515)
T 3i8b_A 395 TRENL---ARAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSIL-GMDVTRP-ATDEYVAIGAA 466 (515)
T ss_dssp SHHHH---HHHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-CCCCHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHh-CCceEec-CCcccHHHHHH
Confidence 55554 44444444333333 3344443 4789999999999999999999999 5666543 56779999999
Q ss_pred hHHHHHhC
Q 043979 197 VQASILSG 204 (443)
Q Consensus 197 ~~a~~l~~ 204 (443)
+.|+.-.|
T Consensus 467 ~lA~~a~G 474 (515)
T 3i8b_A 467 RQAAWVLS 474 (515)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHcC
Confidence 99986654
No 48
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.13 E-value=0.012 Score=60.37 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=54.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhH
Q 043979 120 TRARFEVLNMDLFRKCMEHVEKCLRNSK-IDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQ 198 (443)
Q Consensus 120 tr~efe~l~~~~~~~i~~~i~~~l~~a~-~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~ 198 (443)
+|.++ +.-+++.+.-.++..++... .....++.|.++||.++.+.+.+.+.+.+ +.++..+ .+.|+.|+|||+.
T Consensus 368 ~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~-g~pV~~~-~~~e~~alGaA~l 442 (495)
T 2dpn_A 368 SRAHL---ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLL-GVPVAVP-EVTETTALGAALM 442 (495)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHh-CCeeEec-CCcccHHHHHHHH
Confidence 45443 34444444444444444321 11234678999999999999999999999 5666544 4566999999999
Q ss_pred HHHHhC
Q 043979 199 ASILSG 204 (443)
Q Consensus 199 a~~l~~ 204 (443)
|+.-.|
T Consensus 443 a~~a~G 448 (495)
T 2dpn_A 443 AGVGAG 448 (495)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 986654
No 49
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.13 E-value=0.0082 Score=61.72 Aligned_cols=51 Identities=22% Similarity=0.309 Sum_probs=43.5
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhC
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSG 204 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~ 204 (443)
.++.|.++||.++.+++.+++.+.| +.++..+ .+.|+.|+|||+.|+.-.|
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~la~~a~G 454 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIV-NTSVERP-EIQETTALGAAFLAGLAVG 454 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHTT
T ss_pred CCcEEEEecchhcCHHHHHHHHHHh-CCceEec-CCCcchHHHHHHHHHHHhC
Confidence 4789999999999999999999999 5666543 5678999999999987664
No 50
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.06 E-value=0.0071 Score=62.29 Aligned_cols=51 Identities=24% Similarity=0.166 Sum_probs=43.1
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhC
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSG 204 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~ 204 (443)
.++.|.++||.++.|.+.+.+.+.| +.++..+.. .|+.|+|||+.|+.-.|
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~~~-~e~~alGaA~lA~~a~G 450 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVL-QRPVQLLAN-PLGSAVGAAWVAAIGGG 450 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEEEC-CSTHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHh-CCeEEecCC-CCchHHHHHHHHHHHhC
Confidence 4789999999999999999999999 577665543 56899999999987664
No 51
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.04 E-value=0.0093 Score=62.36 Aligned_cols=80 Identities=18% Similarity=0.190 Sum_probs=56.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCc-CcHHHHHHHHhhhCCccccccCCcchhhhhhhhhH
Q 043979 120 TRARFEVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGST-RIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQ 198 (443)
Q Consensus 120 tr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGss-r~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~ 198 (443)
+|.+| +.-+++.+.-.++.+++...-....++.|.++||.+ +.+++.+++.+.| +.++.. ..+.|+.|+|||+.
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~-g~pV~~-~~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVT-NREIKV-AASKQTPALGAAMF 484 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHH-TSCEEE-BCCSSHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHH-CCeeEe-cCCCccHHHHHHHH
Confidence 56554 445555554444444432211223578999999999 9999999999999 566654 35688999999999
Q ss_pred HHHHhC
Q 043979 199 ASILSG 204 (443)
Q Consensus 199 a~~l~~ 204 (443)
|+.-.|
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987664
No 52
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.02 E-value=0.0083 Score=62.07 Aligned_cols=81 Identities=20% Similarity=0.239 Sum_probs=55.8
Q ss_pred ecHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhh
Q 043979 119 ITRARFEV-LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAV 197 (443)
Q Consensus 119 itr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~ 197 (443)
-+|.++-. +++.+.-.+...++.+-+.++. .++.|.++||.++.|++.+++.+.| +.++..+ ...|+.|+|||+
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~E~~alGAA~ 445 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAY 445 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHH-CCEEEeC-CCCchHHHHHHH
Confidence 35555432 2233333333344333334553 4789999999999999999999999 5776654 456899999999
Q ss_pred HHHHHhC
Q 043979 198 QASILSG 204 (443)
Q Consensus 198 ~a~~l~~ 204 (443)
.|+.-.|
T Consensus 446 lA~~a~G 452 (526)
T 3ezw_A 446 LAGLAVG 452 (526)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9987765
No 53
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.00 E-value=0.0089 Score=61.53 Aligned_cols=80 Identities=18% Similarity=0.212 Sum_probs=54.5
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhH
Q 043979 120 TRARFEV-LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQ 198 (443)
Q Consensus 120 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~ 198 (443)
+|.+|-. +++.+.-.+...++.+-+..+. .++.|.++||.++.+++.+++.+.| +.++.. ..+.|+.|+|||+.
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~-~~~~e~~alGaA~l 447 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADIL-DIDVQR-AANLETTALGAAYL 447 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHH-TSEEEE-CSSSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHh-CCeEEe-cCCCcchhHHHHHH
Confidence 5555433 2333333333333333222343 4789999999999999999999999 566654 45678999999999
Q ss_pred HHHHhC
Q 043979 199 ASILSG 204 (443)
Q Consensus 199 a~~l~~ 204 (443)
|+.-.|
T Consensus 448 A~~a~G 453 (506)
T 3h3n_X 448 AGLAVG 453 (506)
T ss_dssp HHHHTT
T ss_pred HHHHhC
Confidence 987664
No 54
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=95.99 E-value=0.0066 Score=62.70 Aligned_cols=51 Identities=20% Similarity=0.095 Sum_probs=42.5
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhC
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSG 204 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~ 204 (443)
.++.|.++||.++.|.+.+++.+.| +.++..+ .+.|+.|+|||+.|+.-.|
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~-~~~e~~alGAA~lA~~a~G 475 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLL-DAPVDRP-VILETTALGVAWLAGSRAG 475 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CcceEEEeCccccCHHHHHHHHHHh-CCeEEec-CCCccHHHHHHHHHHHHcC
Confidence 4788999999999999999999999 5666543 5677999999999987665
No 55
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=95.95 E-value=0.009 Score=61.55 Aligned_cols=51 Identities=25% Similarity=0.367 Sum_probs=43.5
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHHhC
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASILSG 204 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l~~ 204 (443)
.++.|.++||.++.+.+.+++.+.| +.++..+ .+.|+.|+|||+.|+.-.|
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~-g~pV~~~-~~~e~~alGaA~lA~~a~G 451 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDIL-GTRVERP-EVREVTALGAAYLAGLAVG 451 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEEE-SCCCHHHHHHHHHHHHHHT
T ss_pred CccEEEEeCchhcCHHHHHHHHHHh-CCceEec-CCCCcHHHHHHHHHHHHhC
Confidence 4789999999999999999999999 5666543 4677999999999987665
No 56
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.66 E-value=0.013 Score=60.25 Aligned_cols=80 Identities=23% Similarity=0.187 Sum_probs=54.1
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCc-ceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhh
Q 043979 120 TRARFEV-LNMDLFRKCMEHVEKCLRNSKIDKSQV-HDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAV 197 (443)
Q Consensus 120 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~i-d~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~ 197 (443)
+|.++-. +++.+.-.+...++.+-+..+. .+ +.|.++||.++.|.+.+.+.+.| +.++..+ .+.|+.|+|||+
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~-g~pV~~~-~~~e~~alGaA~ 450 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDII-NTKIEVS-KYKEVTSLGAAV 450 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHH-CCeEEec-CCCcchHHHHHH
Confidence 4554432 3333444444444333222343 35 78999999999999999999999 5666544 456699999999
Q ss_pred HHHHHhC
Q 043979 198 QASILSG 204 (443)
Q Consensus 198 ~a~~l~~ 204 (443)
.|+.-.|
T Consensus 451 la~~~~G 457 (503)
T 2w40_A 451 LAGLEVK 457 (503)
T ss_dssp HHHHHTT
T ss_pred HHHHHhC
Confidence 9986654
No 57
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.61 E-value=0.016 Score=59.48 Aligned_cols=80 Identities=20% Similarity=0.210 Sum_probs=55.2
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhH
Q 043979 120 TRARFEV-LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQ 198 (443)
Q Consensus 120 tr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~ 198 (443)
+|.++-. +++.+.-.+...++.+-+..+. .++.|.++||.++.+++.+++.+.| +.++..+ .+.|+.|+|||+.
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~-g~pV~~~-~~~e~~alGaA~l 447 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQL-GVDVVRP-KVAETTALGAAYA 447 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHH-TSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHh-CCeEEeC-CCCcchHHHHHHH
Confidence 5555433 3334444444444433333453 3688999999999999999999999 5666544 5567999999999
Q ss_pred HHHHhC
Q 043979 199 ASILSG 204 (443)
Q Consensus 199 a~~l~~ 204 (443)
|+.-.|
T Consensus 448 A~~~~G 453 (504)
T 2d4w_A 448 AGIAVG 453 (504)
T ss_dssp HHHHHT
T ss_pred HHhhcC
Confidence 987664
No 58
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=95.35 E-value=0.02 Score=58.46 Aligned_cols=79 Identities=13% Similarity=0.060 Sum_probs=51.6
Q ss_pred EecHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhh
Q 043979 118 TITRARFEV-LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAA 196 (443)
Q Consensus 118 ~itr~efe~-l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa 196 (443)
.-+|.+|-. +++.+.-.+...++.+-+..+. .++.|.++||.++.+++.+.+.+.| +.++.... .|+.|.|||
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvl-g~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADAC-GIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHH-TSEEEECC--TTHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHH-CCeeecCC--ccHhHHHHH
Confidence 345665533 3333333333444333222343 4688999999999999999999999 57765443 689999997
Q ss_pred hHHHHH
Q 043979 197 VQASIL 202 (443)
Q Consensus 197 ~~a~~l 202 (443)
+.|..-
T Consensus 435 ~~A~~a 440 (489)
T 2uyt_A 435 GIQLMT 440 (489)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666543
No 59
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=93.91 E-value=0.1 Score=53.28 Aligned_cols=72 Identities=7% Similarity=-0.045 Sum_probs=54.3
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhh-hCCccccccCCcchhhhhhhhhHHHH
Q 043979 125 EVLNMDLFRK--CMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDF-FNGKELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 125 e~l~~~~~~~--i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~-f~~~~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
..+..-+++. +.-.++.+++...- .+.|.++||.++.|+..+.+.+. | +.++..+. ..|+.|+|||+.|+.
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~-g~pV~~~~-~~e~~alGAA~lA~~ 435 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRP-DCAVYTAN-AHNDVSFGALRLIDP 435 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHST-TSEEEEES-SCCCTTGGGHHHHCT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcC-CCeEEEcC-CCchHHHHHHHHhCc
Confidence 4566666664 55566666665432 37899999999999999999999 9 57766553 467899999999974
Q ss_pred H
Q 043979 202 L 202 (443)
Q Consensus 202 l 202 (443)
-
T Consensus 436 a 436 (482)
T 3h6e_A 436 G 436 (482)
T ss_dssp T
T ss_pred c
Confidence 3
No 60
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=87.50 E-value=0.55 Score=49.02 Aligned_cols=83 Identities=16% Similarity=0.205 Sum_probs=50.4
Q ss_pred cccchhHHHHHHhccccCcCCCCCcEEEEEEeCCceeEEEEEEEeCCee------eeh----HHHHHHHHHHHHHHHhhc
Q 043979 2 RIINEPAAATIVYGLDKKASRTGEKNVLIFDLGGGTFDVSLLMIEEGIF------EVK----DFDNRLVNNFVAEFKRKH 71 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~~~~~~~------~v~----d~D~~l~~~l~~~~~~~~ 71 (443)
-++.+|.||+++++. ..+-||+|+|+|+|+|+.|. .|.. .+- +++..|.++|..+--...
T Consensus 254 yl~~qavlAlyasGl--------~ttGLVVDiG~g~T~VvPV~--eG~vl~~ai~rL~iGG~dLT~yL~kLL~~rgypy~ 323 (655)
T 4am6_A 254 AIIQESLATCYGAGI--------STSTCVVNIGAAETRIACVD--EGTVLEHSAITLDYGGDDITRLFALFLLQSDFPLQ 323 (655)
T ss_dssp EEEEHHHHHHHHSCC--------SSCEEEEEECSSCEEEEEEE--TTEECGGGCEEESCCHHHHHHHHHHHHHHTTCSCC
T ss_pred eeccHHHHHHHhCCC--------CCceEEEcCCCceEEEEEEe--CCEEEhhheeeecchHHHHHHHHHHHHHHcCCCcc
Confidence 367789999887753 24679999999999999974 3311 111 888888887765310000
Q ss_pred cCCCccCHHHHHHHHHHHHHHHHHcCCC
Q 043979 72 KIDISGNARALRRLRTAYERAKRTLSST 99 (443)
Q Consensus 72 ~~~~~~~~~~~~~L~~~~E~~K~~LS~~ 99 (443)
..++. .. .=...++.+|+.++--
T Consensus 324 ~~~f~--t~---~e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 324 DWKID--SK---HGWLLAERLKKNFTTF 346 (655)
T ss_dssp SCCTT--SH---HHHHHHHHHHHHHCCC
T ss_pred ccCCC--Cc---chHHHHHHHHHheEEE
Confidence 01111 11 1234567788887755
No 61
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=85.11 E-value=2 Score=41.36 Aligned_cols=69 Identities=16% Similarity=0.209 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC--CccccccCC---cchhhhhhhhhHHHHHhC
Q 043979 131 LFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN--GKELCKSIN---PDEVVAYGAAVQASILSG 204 (443)
Q Consensus 131 ~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~--~~~i~~~~~---pdeaVa~GAa~~a~~l~~ 204 (443)
+.+.+.+.++++++..+ ++.|+|.||-+...++++.|.+.+. +.++..+.. -|.+++.|+|.+.....|
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44555666666666655 5789999999999999999998773 224444432 478999999977665554
No 62
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=84.14 E-value=1.6 Score=46.84 Aligned_cols=67 Identities=19% Similarity=0.191 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC--Ccccccc-CC--cchhhhhhhhhHHHHHhC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN--GKELCKS-IN--PDEVVAYGAAVQASILSG 204 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~--~~~i~~~-~~--pdeaVa~GAa~~a~~l~~ 204 (443)
+.+.+.+.++.+..+ ++.|+|.||-+...++++.|.+.+. +-++..+ .- -|-++|+|+|++|+....
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 334444555555544 6799999999999999999998872 2333322 23 389999999999876553
No 63
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=84.03 E-value=0.73 Score=44.60 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=27.6
Q ss_pred cccchhHHHHHHhccc-cCcCC-CCCcEEEEEEeCCceeEEEEEEE
Q 043979 2 RIINEPAAATIVYGLD-KKASR-TGEKNVLIFDLGGGTFDVSLLMI 45 (443)
Q Consensus 2 ~li~Ep~AAal~y~~~-~~~~~-~~~~~vlV~D~GggT~Dvsv~~~ 45 (443)
++|+-.+=|.+.|.-- ..... ......+|+|+|||+|+++++.-
T Consensus 120 eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~ 165 (343)
T 3cer_A 120 EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGD 165 (343)
T ss_dssp EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCC
T ss_pred EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeec
Confidence 4566555566655322 11110 02356999999999999999754
No 64
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=83.97 E-value=2.2 Score=40.88 Aligned_cols=66 Identities=15% Similarity=0.177 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC--CccccccC---CcchhhhhhhhhHHHHHh
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN--GKELCKSI---NPDEVVAYGAAVQASILS 203 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~--~~~i~~~~---~pdeaVa~GAa~~a~~l~ 203 (443)
+.+...++++.+..+ ++.|+|.||-+....+++.|.+.+. +.++..+. --|.+++.|+|.+.....
T Consensus 230 ~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 230 AALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp HHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 444555555555544 6789999999999999999998773 23444443 236788999887665443
No 65
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=83.83 E-value=0.55 Score=44.89 Aligned_cols=42 Identities=19% Similarity=0.491 Sum_probs=26.0
Q ss_pred cccchhHHHHHHh-ccccCcCCCCCcEEEEEEeCCceeEEEEEE
Q 043979 2 RIINEPAAATIVY-GLDKKASRTGEKNVLIFDLGGGTFDVSLLM 44 (443)
Q Consensus 2 ~li~Ep~AAal~y-~~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 44 (443)
++|+-.+=|.+.| +...... ..+...+|+|+|||+|.+++++
T Consensus 107 ~vIsG~eEA~l~~~gv~~~~~-~~~~~~lviDIGGGStEl~~~~ 149 (315)
T 3mdq_A 107 EVIDGAREAELIFRGVQQAVP-MEDHISLAMDIGGGSVEFIIGN 149 (315)
T ss_dssp EECCHHHHHHHHHHHHHHHSC-CTTCCEEEEEECSSCEEEEEEC
T ss_pred EEeCHHHHHHHHHHHHHhcCC-CCCCCEEEEEeCCCceEEEEEE
Confidence 3455444444444 2222211 1246799999999999999986
No 66
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=83.79 E-value=0.8 Score=43.77 Aligned_cols=20 Identities=30% Similarity=0.459 Sum_probs=17.8
Q ss_pred CcEEEEEEeCCceeEEEEEE
Q 043979 25 EKNVLIFDLGGGTFDVSLLM 44 (443)
Q Consensus 25 ~~~vlV~D~GggT~Dvsv~~ 44 (443)
....+|+|+|||+|.+++.+
T Consensus 137 ~~~~lvvDIGGGStEl~~~~ 156 (315)
T 1t6c_A 137 EGEVCVVDQGGGSTEYVFGK 156 (315)
T ss_dssp CSEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEeCCCcEEEEEEe
Confidence 46799999999999999975
No 67
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=83.27 E-value=2.8 Score=43.99 Aligned_cols=65 Identities=12% Similarity=0.095 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCcccccc---CCcchhhhhhhhhHHHH
Q 043979 132 FRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKS---INPDEVVAYGAAVQASI 201 (443)
Q Consensus 132 ~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~---~~pdeaVa~GAa~~a~~ 201 (443)
.+.+.+.+.++.++.+ ++.|+|+||-+...++++.|.+.+.+.++..+ +--|-++|+|.|++|+.
T Consensus 584 a~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 584 AQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3444455555555444 67999999999999999999998743343322 23489999999998864
No 68
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=82.60 E-value=2.4 Score=39.60 Aligned_cols=50 Identities=14% Similarity=0.166 Sum_probs=38.3
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHHH
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASIL 202 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~l 202 (443)
+++.|+|.||.+..+.+.+.+++.+...++..+. .+.+.+.||++.+...
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHHh
Confidence 4678999999887788888888887544555555 6688999999887543
No 69
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=82.14 E-value=3.7 Score=44.12 Aligned_cols=64 Identities=14% Similarity=0.200 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCc--cccccCC---cchhhhhhhhhHHHHH
Q 043979 134 KCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGK--ELCKSIN---PDEVVAYGAAVQASIL 202 (443)
Q Consensus 134 ~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~--~i~~~~~---pdeaVa~GAa~~a~~l 202 (443)
-+.+.+.++.++.+ ++.|+|.||-.....+++.|.+.+... ++..+.. -|..+|.|+|++|+..
T Consensus 692 ~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 692 AFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 33455555555544 678999999999999999999987433 3333321 2889999999988653
No 70
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=81.14 E-value=4.1 Score=39.58 Aligned_cols=73 Identities=12% Similarity=0.156 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCcccc----ccCCcchhhhhhhhhHHHH
Q 043979 126 VLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELC----KSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 126 ~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~----~~~~pdeaVa~GAa~~a~~ 201 (443)
++..-+.+-+...|.+.++... ..++.|++.||+++.|++.++|++.+++..+. ..++||..=|..-|+.|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 3444444445555555555433 23678999999999999999999999644332 2234554334445666653
No 71
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=79.65 E-value=5.5 Score=41.13 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCcccccc-CCcchhhhhhhhhH
Q 043979 121 RARFEVLNMDLF-RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKS-INPDEVVAYGAAVQ 198 (443)
Q Consensus 121 r~efe~l~~~~~-~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~-~~pdeaVa~GAa~~ 198 (443)
+.++-..++..+ +-+.+.+.++.+..+ ++.|.|.||-+....+++.|.+..+-..+..+ .--|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 445545454433 334455566666555 78999999999999999999876532233333 34489999999999
Q ss_pred HHHHhCC
Q 043979 199 ASILSGE 205 (443)
Q Consensus 199 a~~l~~~ 205 (443)
+....|.
T Consensus 355 a~~~~g~ 361 (576)
T 3ven_A 355 VAVELGD 361 (576)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9877653
No 72
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=76.33 E-value=8.3 Score=37.44 Aligned_cols=70 Identities=17% Similarity=0.235 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCcccc----ccCCcc--hhhhhhhhhH
Q 043979 125 EVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELC----KSINPD--EVVAYGAAVQ 198 (443)
Q Consensus 125 e~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~----~~~~pd--eaVa~GAa~~ 198 (443)
+++..-+.+=+...|.+.++... ..+.|++.||+++.|++.++|++.+++.++. ..++|| ||+|. |+.
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~L 339 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWL 339 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHH
Confidence 34555555555666666665542 3568999999999999999999999653332 123444 66655 555
Q ss_pred HH
Q 043979 199 AS 200 (443)
Q Consensus 199 a~ 200 (443)
|.
T Consensus 340 A~ 341 (370)
T 3cqy_A 340 AM 341 (370)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 73
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=74.58 E-value=11 Score=34.94 Aligned_cols=50 Identities=14% Similarity=0.067 Sum_probs=33.4
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCC-----------ccccccCCcchhhhhhhhhHHHH
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNG-----------KELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~-----------~~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
+++.|+|-||.+..|.+.+.+++.+.. .++..+.-.+.+.++|||.++..
T Consensus 227 ~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 227 DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 367899999988777777776665421 12233334567899999988754
No 74
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=72.22 E-value=2.2 Score=43.56 Aligned_cols=52 Identities=17% Similarity=0.227 Sum_probs=36.3
Q ss_pred EecHHHHHHHHHHHHH---------------------HHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHh
Q 043979 118 TITRARFEVLNMDLFR---------------------KCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQD 174 (443)
Q Consensus 118 ~itr~efe~l~~~~~~---------------------~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~ 174 (443)
.||+++|+++++.+.. --.-.+..+++..+ ++.|.+.+++=|=-.+.+++.+
T Consensus 236 ~i~~~~l~~~~~~l~~~~~~~r~~~~gl~~~Rad~i~~g~~Il~~i~~~~~-----~~~i~vs~~glreGll~~~~~~ 308 (513)
T 1u6z_A 236 IITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALA-----IRELRLSDGALREGVLYEMEGR 308 (513)
T ss_dssp CBCHHHHHHHHHHHTTCSBGGGCCCTTCCTTGGGTHHHHHHHHHHHHHHHT-----CSCBEECSCCHHHHHHHHHHHH
T ss_pred eecHHHHHHHHHHHHCCCHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHcC-----CCEEEECCCcHHHHHHHHHHHh
Confidence 5899999988876653 11344556666554 6788888888887777777654
No 75
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=71.77 E-value=2.4 Score=43.24 Aligned_cols=40 Identities=15% Similarity=0.154 Sum_probs=25.2
Q ss_pred cccchhHHHHHHhc-cccCcCCCCCcEEEEEEeCCceeEEEEEE
Q 043979 2 RIINEPAAATIVYG-LDKKASRTGEKNVLIFDLGGGTFDVSLLM 44 (443)
Q Consensus 2 ~li~Ep~AAal~y~-~~~~~~~~~~~~vlV~D~GggT~Dvsv~~ 44 (443)
++|+-.+=|.+.|. ..... .....+|+|+|||+|.+++++
T Consensus 118 evIsG~EEA~l~~~gv~~~~---~~~~~lvvDIGGGStEl~~~~ 158 (508)
T 3hi0_A 118 EVLSGEKEALYSAYGVISGF---YQPDGIAGDLGGGSLELIDIK 158 (508)
T ss_dssp EECCHHHHHHHHHHHHHHHS---SSCEEEEEEECSSCEEEEEEE
T ss_pred EEecHHHHHHHHHHHHHhcC---CCCCeEEEEeCCCceEEEEee
Confidence 45555555555442 22221 123459999999999999986
No 76
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=71.57 E-value=72 Score=31.32 Aligned_cols=44 Identities=9% Similarity=0.286 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCc-CcHHHHHHHHhhh
Q 043979 129 MDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGST-RIPKVQQLLQDFF 176 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGss-r~p~v~~~l~~~f 176 (443)
+-+..++.+.|-..... + ..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 311 d~f~yri~k~IGa~aa~--L--ggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 311 KTFVHRIARHIAGHAAS--L--HRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHTT--C--SSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH--h--CCCCEEEECccccccCHHHHHHHHhhH
Confidence 33444555555444322 2 4699999999999 9999999998754
No 77
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=70.03 E-value=2.7 Score=40.74 Aligned_cols=20 Identities=30% Similarity=0.642 Sum_probs=17.5
Q ss_pred CcEEEEEEeCCceeEEEEEE
Q 043979 25 EKNVLIFDLGGGTFDVSLLM 44 (443)
Q Consensus 25 ~~~vlV~D~GggT~Dvsv~~ 44 (443)
.++++|+|+|||++.+++..
T Consensus 139 ~~t~~v~DiGGGStei~~~~ 158 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFPM 158 (353)
T ss_dssp SSCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEeCCCceEEEEec
Confidence 35799999999999999873
No 78
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=69.49 E-value=16 Score=34.44 Aligned_cols=69 Identities=13% Similarity=0.071 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCc-HHHHHHHHhhhC---------CccccccCCcchhhhhhhhhHHH
Q 043979 131 LFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRI-PKVQQLLQDFFN---------GKELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 131 ~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~-p~v~~~l~~~f~---------~~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
++++....+-..+...- ..-+++.|+|-||.++. +.+.+.|++.+. ..++..+.-.+.+.++|||.++.
T Consensus 240 ~~~~~~~~La~~i~~l~-~~ldP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 240 VWADIGTIIGESLVNIV-RVMDLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHCCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 44444444444433321 11246889999998886 666666655441 12345555667899999998764
No 79
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=67.93 E-value=14 Score=34.49 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=37.2
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCc-----cccccCCcchhhhhhhhhHHHHH
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGK-----ELCKSINPDEVVAYGAAVQASIL 202 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~-----~i~~~~~pdeaVa~GAa~~a~~l 202 (443)
+++.|+|-||.+..|.+.+.|++.+... .+..+.-.+.+.++|||.++...
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 4678999999998887778888776321 33444456789999999887643
No 80
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=67.89 E-value=12 Score=35.15 Aligned_cols=50 Identities=18% Similarity=0.163 Sum_probs=33.8
Q ss_pred CcceEEEecCCcC-cHHHHHHHHhhhCC---------ccccccCCcchhhhhhhhhHHHH
Q 043979 152 QVHDVVLVSGSTR-IPKVQQLLQDFFNG---------KELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 152 ~id~ViLvGGssr-~p~v~~~l~~~f~~---------~~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
+++.|+|.||.+. .|++.+.+++.+.. .++..+.-.+.+.++|||.++..
T Consensus 262 ~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 262 NPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 3568999999886 57777777765521 12333335667899999987753
No 81
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=66.86 E-value=13 Score=35.24 Aligned_cols=48 Identities=19% Similarity=0.131 Sum_probs=33.5
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCc--------cccccCCcchhhhhhhhhHH
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGK--------ELCKSINPDEVVAYGAAVQA 199 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~--------~i~~~~~pdeaVa~GAa~~a 199 (443)
+++.|+|-||.+..+.+.+.|++.+... ++..+.-.+.+.++|||..+
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 4678999999998887777777766321 22333345688999999765
No 82
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=66.73 E-value=9.8 Score=35.10 Aligned_cols=49 Identities=16% Similarity=0.167 Sum_probs=33.7
Q ss_pred CcceEEEecCCcCcHHHHHHHHhhhCCc------cccccCCcchhhhhhhhhHHH
Q 043979 152 QVHDVVLVSGSTRIPKVQQLLQDFFNGK------ELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 152 ~id~ViLvGGssr~p~v~~~l~~~f~~~------~i~~~~~pdeaVa~GAa~~a~ 200 (443)
+++.|+|-||.+..|.+.+.+++.+... ++..+...+.+.++|||.++.
T Consensus 233 ~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 233 DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 3567888898887788888887776321 223334456789999998763
No 83
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=63.13 E-value=4.8 Score=38.50 Aligned_cols=71 Identities=11% Similarity=0.045 Sum_probs=38.0
Q ss_pred cHHHHHHHHHHHHHHH----HHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCcc---ccccCCcchhhh
Q 043979 120 TRARFEVLNMDLFRKC----MEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKE---LCKSINPDEVVA 192 (443)
Q Consensus 120 tr~efe~l~~~~~~~i----~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~---i~~~~~pdeaVa 192 (443)
+.++.+++.+.+.++. .+-+.+++++.+ +..|+.+||. +++-..+.+.++-.. ...+.+.+-+-|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~-----~~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYG-----SKKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----CCEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----CCeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 5666766666655544 444555555544 3378999977 355555543321110 010223455678
Q ss_pred hhhhhH
Q 043979 193 YGAAVQ 198 (443)
Q Consensus 193 ~GAa~~ 198 (443)
.|+|+.
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888854
No 84
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=60.23 E-value=3.6 Score=38.39 Aligned_cols=67 Identities=4% Similarity=-0.123 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcC-CcceEEEecCCcCc--HHHHHHHHhhhCCccccccCCcchhhhhhhhhHHHH
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKS-QVHDVVLVSGSTRI--PKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~-~id~ViLvGGssr~--p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
....++++....+-..+ . +..- +++.|+|.||-++. +.+++.+++... ++ ..|..+...||+.++..
T Consensus 211 ~A~~i~~~~~~~La~~i-~--~~~~~~p~~vvlgGGv~~~~~~~l~~~l~~~~~--~i---~~~~~a~~~GA~~la~~ 280 (291)
T 1zbs_A 211 AVYSLVQNSFDDFLVRN-V--LRYNRPDLPLHFIGSVAFHYREVLSSVIKKRGL--TL---GSVLQSPMEGLIQYHHN 280 (291)
T ss_dssp HHHHHHHHHHHHHHHHH-T--GGGCCTTSCEEEESHHHHHTHHHHHHHHHHTTC--CE---EEEESCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-h--cccCCCCceEEEECchHHhhHHHHHHHHHHcCC--ee---cccCcCHHHHHHHHHHh
Confidence 34455555555555555 2 2222 57889999998876 666666655431 22 23668999999998864
No 85
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=60.16 E-value=11 Score=35.36 Aligned_cols=48 Identities=17% Similarity=0.135 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
+.+...+.+...++++|+++++++++|++|+.-|+++++ -+.+.+.|+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 259 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLG 259 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 444556677889999999999999999999999998764 457888884
No 86
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=58.89 E-value=24 Score=33.12 Aligned_cols=49 Identities=14% Similarity=0.079 Sum_probs=31.5
Q ss_pred CcceEEEecCCcCc-HHHHHHHHhhhC----------CccccccCCcchhhhhhhhhHHH
Q 043979 152 QVHDVVLVSGSTRI-PKVQQLLQDFFN----------GKELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 152 ~id~ViLvGGssr~-p~v~~~l~~~f~----------~~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
+++.|+|-||.++. +++.+.+++.+. ..++..+.-.+.+.++|||.++.
T Consensus 252 ~p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~~~a~l~GAa~l~~ 311 (321)
T 3vgl_A 252 DPSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLGGKAGLVGAADLAR 311 (321)
T ss_dssp CCSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCCCcHHHHHHHHHHH
Confidence 46789999988875 555555554431 11334444567899999997664
No 87
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=57.79 E-value=6.3 Score=36.91 Aligned_cols=61 Identities=18% Similarity=0.138 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcC--cHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHH
Q 043979 130 DLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTR--IPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 130 ~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr--~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
.++++....+-..+...-. . +++.|+|.||.+. .|++.+.+++.+ ..|+.+.+.||+++|.
T Consensus 230 ~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i--------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 230 ALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL--------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC--------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc--------cCCCCCHHHHHHHHHh
Confidence 3444444444444443321 2 6788999998864 456666666543 1256788999998874
No 88
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=57.34 E-value=17 Score=36.45 Aligned_cols=26 Identities=38% Similarity=0.602 Sum_probs=21.9
Q ss_pred CCcEEEEEEeCCceeEEEEEEEeCCe
Q 043979 24 GEKNVLIFDLGGGTFDVSLLMIEEGI 49 (443)
Q Consensus 24 ~~~~vlV~D~GggT~Dvsv~~~~~~~ 49 (443)
+...+|.+|+||.+|-|.+|++.++.
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~ 100 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGE 100 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC--
T ss_pred cceEEEEEEecCceEEEEEEEECCCC
Confidence 45689999999999999999998653
No 89
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=57.25 E-value=32 Score=32.20 Aligned_cols=50 Identities=20% Similarity=0.227 Sum_probs=33.9
Q ss_pred CcceEEEecCCcCc-----HHHHHHHHhhhCC------ccccccCCcchhhhhhhhhHHHH
Q 043979 152 QVHDVVLVSGSTRI-----PKVQQLLQDFFNG------KELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 152 ~id~ViLvGGssr~-----p~v~~~l~~~f~~------~~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
+++.|+|-||.++. +.+++.+++.+.. .++..+.-.+.+.++|||.++..
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~~ 299 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAHQ 299 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHHH
Confidence 57889999988875 4677777766521 12333334568999999988753
No 90
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=55.25 E-value=26 Score=33.90 Aligned_cols=49 Identities=14% Similarity=0.091 Sum_probs=33.6
Q ss_pred CcceEEEecCCcCcHH-HHHHHHhhhCCc---cccccCCcchhhhhhhhhHHH
Q 043979 152 QVHDVVLVSGSTRIPK-VQQLLQDFFNGK---ELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 152 ~id~ViLvGGssr~p~-v~~~l~~~f~~~---~i~~~~~pdeaVa~GAa~~a~ 200 (443)
+++.|+|.||.+..+. +.+.+++.+... .+......+.+.++||+..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 5789999999987644 778887777321 222233334689999997763
No 91
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=55.17 E-value=28 Score=32.34 Aligned_cols=49 Identities=22% Similarity=0.144 Sum_probs=31.9
Q ss_pred CcceEEEecCCc-Cc-HHHHHHHHhhhCC-------ccccccCCcchhhhhhhhhHHH
Q 043979 152 QVHDVVLVSGST-RI-PKVQQLLQDFFNG-------KELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 152 ~id~ViLvGGss-r~-p~v~~~l~~~f~~-------~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
+++.|+|-||.+ .. |.+.+.|++.+.. ..+..+.-.+.+.++|||.++.
T Consensus 237 ~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 237 DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 467888888887 54 6566666554421 1233444557899999998875
No 92
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=54.87 E-value=18 Score=36.06 Aligned_cols=25 Identities=36% Similarity=0.652 Sum_probs=22.3
Q ss_pred CCcEEEEEEeCCceeEEEEEEEeCC
Q 043979 24 GEKNVLIFDLGGGTFDVSLLMIEEG 48 (443)
Q Consensus 24 ~~~~vlV~D~GggT~Dvsv~~~~~~ 48 (443)
+...+|++|+||.+|-|.++++.++
T Consensus 57 E~G~~LAlDlGGTn~RV~~V~l~g~ 81 (445)
T 3hm8_A 57 ERGDFLALDLGGTNFRVLLVRVTTG 81 (445)
T ss_dssp CCEEEEEEEESSSSEEEEEEEESSS
T ss_pred eeeEEEEEEecCCeEEEEEEEECCc
Confidence 4568999999999999999999765
No 93
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=54.20 E-value=5.1 Score=38.83 Aligned_cols=14 Identities=29% Similarity=0.145 Sum_probs=6.3
Q ss_pred hhhhhhhhhHHHHH
Q 043979 189 EVVAYGAAVQASIL 202 (443)
Q Consensus 189 eaVa~GAa~~a~~l 202 (443)
..|+.-|.+.|+..
T Consensus 81 qlva~acLfLA~K~ 94 (358)
T 2pk2_A 81 NSVAPAALFLAAKV 94 (358)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhh
Confidence 34444444444443
No 94
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=54.18 E-value=14 Score=34.68 Aligned_cols=47 Identities=9% Similarity=0.024 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
++...+.+...++++|+++++++++|+.|++-++++++ -+.+.+.|+
T Consensus 215 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 261 (322)
T 1ub7_A 215 FKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLG 261 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 34455677889999999999999999999999988664 456777774
No 95
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=53.62 E-value=15 Score=34.08 Aligned_cols=46 Identities=20% Similarity=0.205 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 129 MDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
+...+.+...++++|+++++++++||.|++-|+++++ -+.+.+.|+
T Consensus 206 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg 251 (309)
T 2ebd_A 206 KVAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLN 251 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 3445677788999999999999999999999988764 356777774
No 96
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=52.14 E-value=41 Score=32.36 Aligned_cols=49 Identities=18% Similarity=0.203 Sum_probs=32.0
Q ss_pred CcceEEEecCCcCc-HHHHHHHHhhhCC-------ccccccCCcchhhhhhhhhHHH
Q 043979 152 QVHDVVLVSGSTRI-PKVQQLLQDFFNG-------KELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 152 ~id~ViLvGGssr~-p~v~~~l~~~f~~-------~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
+++.|+|-||.+.. |.+.+.+++.+.. .++..+.-.+.+.++|||.++.
T Consensus 314 dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 314 GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 46789999998864 6676766665521 1223333445689999998764
No 97
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=50.18 E-value=8.1 Score=38.76 Aligned_cols=20 Identities=20% Similarity=0.411 Sum_probs=17.3
Q ss_pred CcEEEEEEeCCceeEEEEEE
Q 043979 25 EKNVLIFDLGGGTFDVSLLM 44 (443)
Q Consensus 25 ~~~vlV~D~GggT~Dvsv~~ 44 (443)
...++|+|+|||++.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 98
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=49.31 E-value=26 Score=35.68 Aligned_cols=41 Identities=22% Similarity=0.408 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 132 FRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 132 ~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
++-+.+.++++++..+ ++.|+|+||-+....+++.+.+.+.
T Consensus 233 ~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~~ 273 (540)
T 3en9_A 233 FSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMCE 273 (540)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHHH
Confidence 3445566666666665 5799999999999999999998763
No 99
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=48.19 E-value=36 Score=31.54 Aligned_cols=47 Identities=6% Similarity=0.071 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
.+.....+...++++|+++++++++||.|++-++++++ -+.+.+.|+
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 253 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRI---MESARERLG 253 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhC
Confidence 34455677889999999999999999999999988653 355677774
No 100
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=46.32 E-value=14 Score=34.87 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=18.9
Q ss_pred CCCcEEEEEEeCCceeEEEEEEEeCC
Q 043979 23 TGEKNVLIFDLGGGTFDVSLLMIEEG 48 (443)
Q Consensus 23 ~~~~~vlV~D~GggT~Dvsv~~~~~~ 48 (443)
+....++.+|+||..+.+.++...+.
T Consensus 21 ~~~~~~lgiDiGgt~i~~~l~d~~g~ 46 (327)
T 2ap1_A 21 QSNAMYYGFDIGGTKIALGVFDSTRR 46 (327)
T ss_dssp --CCEEEEEEECSSEEEEEEEETTCC
T ss_pred cCCceEEEEEECCCEEEEEEEeCCCC
Confidence 34567899999999988888875543
No 101
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=45.37 E-value=34 Score=29.39 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=29.9
Q ss_pred CCCCHHHHHHHH-HhhcccchhhhCCCChHHHHHHHHHHHHHHHHhcC-CCC-cCHHHHHHHHHHHHHhH
Q 043979 330 GRLSKEEIERMV-MRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDG-NQL-AEVDELEDKLKELEGLC 396 (443)
Q Consensus 330 ~~ls~eei~~~~-~r~~l~~~~~~~~~~~~e~~~l~~~~~~~~~Wl~~-~~~-a~~~~~~~kl~~L~~~~ 396 (443)
..||+|+..++. +++....+ ..+-|+.+...-.++.+-+.. +.| +..+.+..++.+|+...
T Consensus 66 LnLT~EQq~ql~~I~~e~r~~------~~~Lr~ql~akr~EL~aL~~a~~~DeakI~aL~~Ei~~Lr~qL 129 (175)
T 3lay_A 66 SPLTTEQQATAQKIYDDYYTQ------TSALRQQLISKRYEYNALLTASSPDTAKINAVAKEMESLGQKL 129 (175)
T ss_dssp --CCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHH
Confidence 358999888765 33332221 122355555555666665543 332 34444444555555443
No 102
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=44.95 E-value=4 Score=38.07 Aligned_cols=68 Identities=10% Similarity=-0.092 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhHHH
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
...++++....+-..+ ...+ ..+++.|+|.||-+.. +.+.|++.+.. .......++.+.+.||++++.
T Consensus 210 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~-~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 210 IRQLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQ-TGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTHHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTT-TTCCEEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhc-CCcEEeecCCCHHHHHHHHHH
Confidence 3344555555554444 2222 1157789999988775 55666666632 111112345788899998764
No 103
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=44.83 E-value=46 Score=30.94 Aligned_cols=49 Identities=14% Similarity=0.150 Sum_probs=31.5
Q ss_pred CcceEEEecCCcCcH----HHHHHHHhhhCC------------ccccccCCcchhhhhhhhhHHH
Q 043979 152 QVHDVVLVSGSTRIP----KVQQLLQDFFNG------------KELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 152 ~id~ViLvGGssr~p----~v~~~l~~~f~~------------~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
+++.|+|-||.++.+ .+++.+++.... ..+..+.-.+.|.++|||.++.
T Consensus 224 dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~GAa~l~~ 288 (302)
T 3epq_A 224 APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGIIGTLVLAH 288 (302)
T ss_dssp CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHHHHHHHHH
T ss_pred CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHHHHHHHHH
Confidence 578899999988764 455555554311 1133334456899999998875
No 104
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=44.33 E-value=4.7 Score=39.09 Aligned_cols=9 Identities=11% Similarity=0.398 Sum_probs=5.2
Q ss_pred CCHHHHHHH
Q 043979 332 LSKEEIERM 340 (443)
Q Consensus 332 ls~eei~~~ 340 (443)
.+.+++...
T Consensus 229 vt~~~l~~i 237 (358)
T 2pk2_A 229 VTLELLDEL 237 (358)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 456666654
No 105
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=43.75 E-value=47 Score=32.18 Aligned_cols=50 Identities=10% Similarity=0.087 Sum_probs=31.8
Q ss_pred CcceEEEecCCcCc-HHHHHHHHhhhCC---------ccccccCCcchhhhhhhhhHHHH
Q 043979 152 QVHDVVLVSGSTRI-PKVQQLLQDFFNG---------KELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 152 ~id~ViLvGGssr~-p~v~~~l~~~f~~---------~~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
+++.|+|-||.+.. +.+.+.+++.+.. .++..+...+.+.++|||+....
T Consensus 334 dP~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~~~~~ 393 (406)
T 1z6r_A 334 NPQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSNQGTMAGAALVKDA 393 (406)
T ss_dssp CCSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCCCTTTTHHHHHHHH
T ss_pred CCCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCChHHHHHHHHHHHH
Confidence 46788888888763 6666666654421 12333445567899999876543
No 106
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=43.19 E-value=37 Score=32.53 Aligned_cols=50 Identities=8% Similarity=-0.108 Sum_probs=28.7
Q ss_pred CcceEEEecC-CcCcHHHHH------HHHhhhCCc-----------cccccCCcchhhhhhhhhHHHH
Q 043979 152 QVHDVVLVSG-STRIPKVQQ------LLQDFFNGK-----------ELCKSINPDEVVAYGAAVQASI 201 (443)
Q Consensus 152 ~id~ViLvGG-ssr~p~v~~------~l~~~f~~~-----------~i~~~~~pdeaVa~GAa~~a~~ 201 (443)
+++.|+|.|| .++.+.+.+ .+++.|... ++......+.+.++|||.++..
T Consensus 304 ~p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 304 LPLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVSYLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp CCSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCcEEEEecCCchhHHHHHHHHHh
Confidence 3566777788 666554444 555543211 1222224457899999988754
No 107
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=42.93 E-value=19 Score=34.12 Aligned_cols=47 Identities=13% Similarity=0.079 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
+....+.+...++++|+++++++++||+|+.-++++++ -+.+.+.|+
T Consensus 226 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg 272 (339)
T 1mzj_A 226 FRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRI---IDVLVDRLG 272 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHhC
Confidence 33445677889999999999999999999999988653 456777774
No 108
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=42.62 E-value=20 Score=33.74 Aligned_cols=47 Identities=19% Similarity=0.227 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
++-..+.+...++++|+++++++++||+|++-++++++ -+.+.+.|+
T Consensus 219 ~~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~~---~d~~~~~lg 265 (331)
T 2x3e_A 219 FGQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTRI---LAAVADQLD 265 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcC
Confidence 33445677888999999999999999999999998664 355777774
No 109
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=42.42 E-value=44 Score=34.79 Aligned_cols=57 Identities=14% Similarity=0.154 Sum_probs=44.8
Q ss_pred EEEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHH
Q 043979 116 YATITRARFEVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQ 173 (443)
Q Consensus 116 ~~~itr~efe~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~ 173 (443)
.+.||..++.++.. .--.+..-++-+|++++++.++|+.|+|.||+..---+.+.+.
T Consensus 499 ~i~itq~DIr~~ql-AKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLIR-AKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHHH-HHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHHH-HHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 47899999987632 2234455667788999999999999999999999777777765
No 110
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=42.41 E-value=23 Score=33.39 Aligned_cols=48 Identities=8% Similarity=-0.058 Sum_probs=28.9
Q ss_pred eEEEecCCcCc-HHHHHHHHhhhCCc----------cccccCCcchhhhhhhhhHHHHHh
Q 043979 155 DVVLVSGSTRI-PKVQQLLQDFFNGK----------ELCKSINPDEVVAYGAAVQASILS 203 (443)
Q Consensus 155 ~ViLvGGssr~-p~v~~~l~~~f~~~----------~i~~~~~pdeaVa~GAa~~a~~l~ 203 (443)
.|+|.||.+.. |.+.+.+++.+... ++......+ +.++|||+.+....
T Consensus 268 ~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~~~-a~~~GAa~la~~~~ 326 (347)
T 2ch5_A 268 PILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKLRH-SSALGGASLGARHI 326 (347)
T ss_dssp EEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEESS-CTHHHHHHHHHHTT
T ss_pred eEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEecCC-ChHHHHHHHHHHhc
Confidence 78888887753 66666666554211 121122234 88999998876443
No 111
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=40.48 E-value=78 Score=29.72 Aligned_cols=67 Identities=13% Similarity=0.072 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC--------CccccccCCcchhhhhhhhhHHH
Q 043979 130 DLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN--------GKELCKSINPDEVVAYGAAVQAS 200 (443)
Q Consensus 130 ~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~--------~~~i~~~~~pdeaVa~GAa~~a~ 200 (443)
.++++....+-..+...- ..-+++.|+|-||.+ +.+.+.+++.+. ..++..+.. ..+.++|||.++.
T Consensus 263 ~il~~~~~~La~~i~~l~-~~l~P~~IvlgG~i~--~~~~~~l~~~l~~~~~~~~~~~~i~~s~~-~~~~~~GAa~l~~ 337 (343)
T 2yhw_A 263 SILRTAGTALGLGVVNIL-HTMNPSLVILSGVLA--SHYIHIVKDVIRQQALSSVQDVDVVVSDL-VDPALLGAASMVL 337 (343)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHTCCSEEEEESTTH--HHHHHHHHHHHHHHSCGGGTTCEEEECCC-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HHhCCCEEEEeCCcH--HHHHHHHHHHHHHhcccccCCcEEEEccC-CCchHHHHHHHHH
Confidence 344444444444443321 012456788888876 455555544331 112222222 2467899998765
No 112
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=38.74 E-value=15 Score=38.36 Aligned_cols=47 Identities=19% Similarity=0.406 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCc--CCcceEEEecCCcCcHHHHHHHHhhh
Q 043979 130 DLFRKCMEHVEKCLRNSKIDK--SQVHDVVLVSGSTRIPKVQQLLQDFF 176 (443)
Q Consensus 130 ~~~~~i~~~i~~~l~~a~~~~--~~id~ViLvGGssr~p~v~~~l~~~f 176 (443)
||=..|++-|..+......++ +=.+.|++|||+|.+|.+.-.|.+.+
T Consensus 476 pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 476 PLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHH
Confidence 344455555554443222222 22567999999999999999999877
No 113
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=38.14 E-value=35 Score=33.09 Aligned_cols=47 Identities=13% Similarity=0.121 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
.....+.+...++++|+++++++++||.|++-++++++ -+.+.+.++
T Consensus 282 ~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~~~~~i---~d~~~~~lg 328 (393)
T 1ted_A 282 PGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHPGGPKI---IEQSVRSLG 328 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECCCcHHH---HHHHHHHcC
Confidence 33456677788999999999999999999999888663 455666663
No 114
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=36.32 E-value=46 Score=31.33 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
+++...+.+...++++|+++++++++|+.+++-.++.+ +-+.+.+.++
T Consensus 228 v~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~---i~~~~~~~lg 275 (333)
T 4dfe_A 228 VFKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIR---IMQSTCRKLG 275 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhC
Confidence 34556677788999999999999999999999988765 4467777663
No 115
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=35.90 E-value=28 Score=32.70 Aligned_cols=45 Identities=16% Similarity=0.121 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 130 DLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 130 ~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
.....+...++++|+++++++++||.|++-++++++ -+.+.+.|+
T Consensus 229 ~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~---~~~~~~~lg 273 (335)
T 1u6e_A 229 WAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRI---NELLVKNLQ 273 (335)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHcC
Confidence 345677888999999999999999999999988764 344666663
No 116
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=35.58 E-value=78 Score=31.79 Aligned_cols=25 Identities=28% Similarity=0.493 Sum_probs=22.1
Q ss_pred CCcEEEEEEeCCceeEEEEEEEeCC
Q 043979 24 GEKNVLIFDLGGGTFDVSLLMIEEG 48 (443)
Q Consensus 24 ~~~~vlV~D~GggT~Dvsv~~~~~~ 48 (443)
+...+|.+|+||.+|-|.++++.+.
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~ 102 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGN 102 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESS
T ss_pred cceEEEEEEecCCeEEEEEEEECCC
Confidence 4468999999999999999999865
No 117
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=33.31 E-value=59 Score=30.73 Aligned_cols=48 Identities=8% Similarity=0.025 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhh
Q 043979 126 VLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFF 176 (443)
Q Consensus 126 ~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f 176 (443)
.+++..++.+...++++|+++++++++||.+++--++.+ +.+.+.+.+
T Consensus 239 ~v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~l 286 (345)
T 3s21_A 239 LLLIEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRP---HTAAFVKSF 286 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH---HHHHHHHHc
Confidence 345556677778889999999999999999999988755 456676666
No 118
>1ycp_F Fibrinopeptide A-alpha; fibrinopeptide-A, complex (serine protease-peptide), thrombi hydrolase-hydrolase substrate complex; 2.50A {Bos taurus}
Probab=33.09 E-value=13 Score=21.08 Aligned_cols=11 Identities=45% Similarity=0.942 Sum_probs=8.6
Q ss_pred CCCCCCCCccc
Q 043979 431 GGAGGGPKIEE 441 (443)
Q Consensus 431 ~~~~~~~~~~~ 441 (443)
|||.+||.|-|
T Consensus 12 GGgvRGPRvvE 22 (26)
T 1ycp_F 12 GGGVRGPRVVE 22 (26)
T ss_pred CCCccCCeeee
Confidence 67888998865
No 119
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=32.72 E-value=76 Score=31.00 Aligned_cols=24 Identities=21% Similarity=0.293 Sum_probs=19.4
Q ss_pred CcEEEEEEeCCceeEEEEEEEeCC
Q 043979 25 EKNVLIFDLGGGTFDVSLLMIEEG 48 (443)
Q Consensus 25 ~~~vlV~D~GggT~Dvsv~~~~~~ 48 (443)
..+++.+|+|+..+.+.++...+.
T Consensus 107 ~~~~lGIDiGgt~i~~~l~d~~G~ 130 (429)
T 1z05_A 107 GWQFLSMRLGRGYLTIALHELGGE 130 (429)
T ss_dssp TEEEEEEEEETTEEEEEEEETTSC
T ss_pred CCEEEEEEECCCEEEEEEECCCCC
Confidence 467899999999999998876544
No 120
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=31.49 E-value=67 Score=31.43 Aligned_cols=45 Identities=9% Similarity=0.021 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCc-CcHHHHHHHHhhh
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGST-RIPKVQQLLQDFF 176 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGss-r~p~v~~~l~~~f 176 (443)
++-+..++.+.|-...... ..+|.|+++||-+ +.+.||+.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 302 LEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 4444556666665555443 3599999999999 9999999998754
No 121
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=31.49 E-value=21 Score=35.57 Aligned_cols=20 Identities=20% Similarity=0.423 Sum_probs=16.9
Q ss_pred CcEEEEEEeCCceeEEEEEE
Q 043979 25 EKNVLIFDLGGGTFDVSLLM 44 (443)
Q Consensus 25 ~~~vlV~D~GggT~Dvsv~~ 44 (443)
..++.++|+|||++.++...
T Consensus 180 ~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 180 GSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp CCCCEEEEECSSEEEEEECC
T ss_pred CCceEEEecCCCceEEEecc
Confidence 35788999999999998764
No 122
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=30.43 E-value=36 Score=33.11 Aligned_cols=45 Identities=16% Similarity=0.184 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCc--HHHHHHHHhhhC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRI--PKVQQLLQDFFN 177 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~--p~v~~~l~~~f~ 177 (443)
......++++|+++++++++|++|.+-|-++.+ |.--..+.+.|+
T Consensus 275 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~~g 321 (408)
T 1j3n_A 275 KGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFG 321 (408)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCcccCHHHHHHHHHHhc
Confidence 455678999999999999999999999999874 333455666663
No 123
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=29.55 E-value=53 Score=32.36 Aligned_cols=46 Identities=7% Similarity=0.197 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCc--HHHHHHHHhhhCC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRI--PKVQQLLQDFFNG 178 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~--p~v~~~l~~~f~~ 178 (443)
......++++|+++++++++|++|++-|-++.+ +.=...|.+.|++
T Consensus 302 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~fg~ 349 (434)
T 2gp6_A 302 ERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNALGG 349 (434)
T ss_dssp HHHHHHHHHHHHHTTCCTTTEEEEECCCCSCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEEeCCcCccchHHHHHHHHHHhcc
Confidence 456778999999999999999999999655544 3444567778854
No 124
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=28.81 E-value=77 Score=29.98 Aligned_cols=44 Identities=11% Similarity=0.136 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHH
Q 043979 129 MDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLL 172 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l 172 (443)
....+.+...|+++|++++++..+||.|...-|-...+.++--+
T Consensus 50 ~~H~~~l~~~i~~~L~~ag~~~~did~Iav~~gPG~~t~lrvg~ 93 (334)
T 3eno_A 50 VHHSEVIDTVISRALEKAKISIHDIDLIGFSMGPGLAPSLRVTA 93 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCcchHHHHH
Confidence 44556778899999999999999999999998888877776544
No 125
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=28.64 E-value=69 Score=28.87 Aligned_cols=54 Identities=19% Similarity=0.177 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhh
Q 043979 132 FRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAA 196 (443)
Q Consensus 132 ~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa 196 (443)
.+.+.+.+.+.+++. .+|.|+| |.+.+|.+.+.|++.++ ..-+||-.++++=+.
T Consensus 159 ~~~l~~~~~~~~~~~-----gad~IVL--GCTh~p~l~~~i~~~~g----VpvID~~~a~~~~~~ 212 (245)
T 3qvl_A 159 QEKVRERCIRALKED-----GSGAIVL--GSGGMATLAQQLTRELR----VPVIDGVSAAVKMVE 212 (245)
T ss_dssp HHHHHHHHHHHHHHS-----CCSEEEE--CCGGGGGGHHHHHHHHT----SCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc-----CCCEEEE--CCCChHHHHHHHHHHcC----CeEEccHHHHHHHHH
Confidence 344444444555433 3677777 78899999999999994 233577666655443
No 126
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=28.37 E-value=78 Score=29.83 Aligned_cols=44 Identities=11% Similarity=0.133 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHH
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQ 170 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~ 170 (443)
......+.+...|+++|++++++..+||.|...-|-...+.++-
T Consensus 43 ~~~~h~~~l~~~i~~~L~~agi~~~did~Ia~~~GPG~~~~lrv 86 (330)
T 2ivn_A 43 AAEHHARLMKPLLRKALSEAGVSLDDIDVIAFSQGPGLGPALRV 86 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCTTTCCEEEEEEESSCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEECCCCchHHHHH
Confidence 34455667788999999999999999999998777776666554
No 127
>3nq4_A 6,7-dimethyl-8-ribityllumazine synthase; 30MER, icosahedral, flavodoxin like fold, transferase, DMRL riboflavin biosynthesis, drug targe; 3.50A {Salmonella typhimurium} PDB: 3mk3_A
Probab=28.02 E-value=61 Score=27.20 Aligned_cols=46 Identities=15% Similarity=0.231 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHcC-CCcCCcceEEEecCCcCcHHHHHHHHhh
Q 043979 129 MDLFRKCMEHVEKCLRNSK-IDKSQVHDVVLVSGSTRIPKVQQLLQDF 175 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~-~~~~~id~ViLvGGssr~p~v~~~l~~~ 175 (443)
+.+.+++.+-..+.|.+.+ +..++|+ ++-|=|+-.+|++-+.+.+.
T Consensus 24 ~~I~~~Ll~gA~~~l~~~G~v~~~~i~-v~~VPGafEiP~aa~~la~~ 70 (156)
T 3nq4_A 24 QFINDSLLDGAVDALTRIGQVKDDNIT-VVWVPGAYELPLATEALAKS 70 (156)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTSEE-EEEESSTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCcccceE-EEEcCcHHHHHHHHHHHHhc
Confidence 3455555666667777888 8777776 67789999999998888653
No 128
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=27.52 E-value=91 Score=29.14 Aligned_cols=70 Identities=10% Similarity=0.059 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcce-EEEecCCcCc--HH-----HHHHHHh--hhC----CccccccCCcchhhhhh
Q 043979 129 MDLFRKCMEHVEKCLRNSKIDKSQVHD-VVLVSGSTRI--PK-----VQQLLQD--FFN----GKELCKSINPDEVVAYG 194 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~~~~~~id~-ViLvGGssr~--p~-----v~~~l~~--~f~----~~~i~~~~~pdeaVa~G 194 (443)
..++++....+-..+...-. .-+++. |++.||-+.. ++ +++.+++ .+. ..++.... .+.+..+|
T Consensus 242 ~~~~~~~~~~Lg~~i~~l~~-~l~P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~a~l~G 319 (332)
T 1sz2_A 242 RRALSLFCVIMGRFGGNLAL-NLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIV-HDNPGLLG 319 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHTCTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEEC-CSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHCCCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEE-CCchhHHH
Confidence 34444444444444433210 113565 8999998863 33 4444442 121 11222232 56889999
Q ss_pred hhhHHH
Q 043979 195 AAVQAS 200 (443)
Q Consensus 195 Aa~~a~ 200 (443)
||.++.
T Consensus 320 Aa~l~~ 325 (332)
T 1sz2_A 320 SGAHLR 325 (332)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998775
No 129
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=27.39 E-value=33 Score=34.21 Aligned_cols=70 Identities=17% Similarity=0.152 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHHH----HcCCCcCCcc-eEEEecCCc--CcHHHHHHHHhhhC-----CccccccCCcchhhhh
Q 043979 126 VLNMDLFRKCMEHVEKCLR----NSKIDKSQVH-DVVLVSGST--RIPKVQQLLQDFFN-----GKELCKSINPDEVVAY 193 (443)
Q Consensus 126 ~l~~~~~~~i~~~i~~~l~----~a~~~~~~id-~ViLvGGss--r~p~v~~~l~~~f~-----~~~i~~~~~pdeaVa~ 193 (443)
.++..+++|....+-..+. ..+ .+ .++.+||+- .-|.+++.+++.+. ..++... -++.+..+
T Consensus 365 ~va~~V~~RaA~lla~~ia~i~~~~~-----~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~-l~~dgs~i 438 (451)
T 1bdg_A 365 YACEMVVKRAAYLAGAGIACILRRIN-----RSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLR-LSEDGSGK 438 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC-----CSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEE-ECTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-----CCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEE-ECCCccHH
Confidence 4555566666555544442 222 23 245556654 45556666655441 1223223 46788999
Q ss_pred hhhhHHHH
Q 043979 194 GAAVQASI 201 (443)
Q Consensus 194 GAa~~a~~ 201 (443)
|||+.|+.
T Consensus 439 GAAllA~~ 446 (451)
T 1bdg_A 439 GAAAIAAS 446 (451)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 99998874
No 130
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=26.42 E-value=1.2e+02 Score=28.86 Aligned_cols=47 Identities=9% Similarity=0.036 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhh
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFF 176 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f 176 (443)
+++-.++.+...++++|+++++++++||.+++--++.+ +.+.+.+.+
T Consensus 260 v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~---i~~~~~~~L 306 (365)
T 3gwa_A 260 VMAFSLAEVPRAADRLLALAGEPRENIDCFVLHQANRF---MLDALRKKM 306 (365)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH---HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHh
Confidence 44445677788899999999999999999999877755 346666666
No 131
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=26.23 E-value=94 Score=29.25 Aligned_cols=48 Identities=2% Similarity=0.016 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhh
Q 043979 126 VLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFF 176 (443)
Q Consensus 126 ~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f 176 (443)
++++..+..+...++++|+++++++++||.+++-=|+. .+.+.+.+.+
T Consensus 242 ~v~~~a~~~~~~~i~~~L~~~gl~~~did~~v~Hq~~~---~i~~~~~~~L 289 (350)
T 4ewp_A 242 SVFRWAVWSMAKVAREALDAAGVEPEDLAAFIPHQANM---RIIDEFAKQL 289 (350)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHTCCGGGEEEEEECCSCH---HHHHHHHHHT
T ss_pred HHHHHHHHhhhHHHHHHHHhhcCChhHhceEEecCCCH---HHHHHHHHHc
Confidence 34445566777889999999999999999999987764 4556677766
No 132
>3fcg_A F1 capsule-anchoring protein; beta barrel, beta strand swapping, cell membrane, cell outer membrane, cell projection, fimbrium, membrane; 2.85A {Yersinia pestis}
Probab=25.66 E-value=2.1e+02 Score=21.42 Aligned_cols=55 Identities=22% Similarity=0.284 Sum_probs=32.8
Q ss_pred cEEEEEeeccccccccCceeeEEEEeCCCCCCCCCCeEEEEEEecCCceEEEEEeeeccCeeeeEEEec
Q 043979 259 GVLIQVYEGERARAKYNNLLGKFELMGIPPAPKGVPQINVCFDIDANGILHVSAKDMTVGVKNHITITN 327 (443)
Q Consensus 259 ~i~i~iy~ge~~~~~~n~~ig~~~l~~i~~~~~g~~~i~v~f~~d~~g~l~v~~~~~~tg~~~~i~i~~ 327 (443)
...+.|++.....-...-.-|-|.|+++++. ...|.|.|++++ ..|++..+++..
T Consensus 26 ~A~V~v~qnG~~iy~~~VppGpF~I~dl~~~-------------~~~Gdl~V~v~e-adG~~~~~~vp~ 80 (90)
T 3fcg_A 26 QARVEVLRDGYTVSNELVPSGPFELANLPLG-------------GGSGELKVIIHE-SDGTKQVFTVPY 80 (90)
T ss_dssp SEEEEEESSSCEEEEEEECSEEEEECCCC----------------CCEEEEEEEEC-TTSCEEEEEEEE
T ss_pred CcEEEEEECCEEEEEeEeCCCCeEEcCCccc-------------CCceeEEEEEEE-CCCCEEEEEECc
Confidence 3567777766655555566788999887753 224556666655 446666555543
No 133
>2gel_A Putative GRAM negative resuscitation promoting FA; YEAZ, RPF, actin-like-fold, glycoprotease, chaperone; 2.05A {Salmonella typhimurium} PDB: 2gem_A 1okj_A
Probab=25.22 E-value=74 Score=28.34 Aligned_cols=39 Identities=13% Similarity=0.205 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHH
Q 043979 132 FRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQ 170 (443)
Q Consensus 132 ~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~ 170 (443)
.+.+...|+++|++++++..+||.|.+.=|-.....+|-
T Consensus 35 ~~~l~~~i~~~L~~a~~~~~did~Iav~~GPGsftglRi 73 (231)
T 2gel_A 35 TQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRI 73 (231)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCSEEEEECCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCChhHhHHH
Confidence 355778899999999999999999999877766676663
No 134
>3r6m_A YEAZ, resuscitation promoting factor; actin/HSP70 nucleotide-binding fold, bacterial resuscitation BUT non-culturable state, Y YJEE; 3.10A {Vibrio parahaemolyticus}
Probab=25.12 E-value=66 Score=28.41 Aligned_cols=65 Identities=11% Similarity=0.142 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhh----hCCccccccCCcchhhhhhh
Q 043979 131 LFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDF----FNGKELCKSINPDEVVAYGA 195 (443)
Q Consensus 131 ~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~----f~~~~i~~~~~pdeaVa~GA 195 (443)
..+.+...|+++|++++++..+||.|.+.=|-.....+|=-+.-. +.-..+...++--++.|..+
T Consensus 35 Hs~~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTglRig~~~AkgLa~~~~iPl~gVstL~a~a~~~ 103 (213)
T 3r6m_A 35 HTKKVLPMVDEVLKEAGLTLQDLDALAFGRGPGSFTGVRIGIGIAQGLAFGAELPMIGVSTLAAMAQAS 103 (213)
T ss_dssp CHHHHHHHHHHHHHTTTCCTTTCSEEEEEEESSCHHHHHHHHHHHHHHHHHTTCCEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCHHHccEEEEecCCCchhhHHHHHHHHHHHHHHhCCCEEEEcCHHHHHHhh
Confidence 345677889999999999999999999988888878877654321 11123344455555555443
No 135
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=24.90 E-value=1.7e+02 Score=28.02 Aligned_cols=49 Identities=12% Similarity=0.188 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCC-cCcHHHHHHHHhhhC
Q 043979 129 MDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGS-TRIPKVQQLLQDFFN 177 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGs-sr~p~v~~~l~~~f~ 177 (443)
+...+-....++++|+++++++++||.|++.-.+ ..+|..-..|.+.+|
T Consensus 79 ~~~~~La~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~p~~a~~v~~~LG 128 (379)
T 3euo_A 79 SDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 128 (379)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCCHHHHHHHHcC
Confidence 4455566778899999999999999998775432 246888888888885
No 136
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=24.81 E-value=1.5e+02 Score=32.35 Aligned_cols=26 Identities=42% Similarity=0.691 Sum_probs=22.7
Q ss_pred CCCcEEEEEEeCCceeEEEEEEEeCC
Q 043979 23 TGEKNVLIFDLGGGTFDVSLLMIEEG 48 (443)
Q Consensus 23 ~~~~~vlV~D~GggT~Dvsv~~~~~~ 48 (443)
.+...+|.+|+||.++-|.++++.++
T Consensus 523 ~E~G~~lalDlGGTn~Rv~~V~l~~g 548 (917)
T 1cza_N 523 TENGDFLALDLGGTNFRVLLVKIRSG 548 (917)
T ss_dssp CCCEEEEEEEESSSSEEEEEEEEECS
T ss_pred CcceEEEEEEECCCcEEEEEEEeCCC
Confidence 35678999999999999999999844
No 137
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=24.31 E-value=60 Score=31.94 Aligned_cols=45 Identities=11% Similarity=0.172 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcH--HHHHHHHhhhC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIP--KVQQLLQDFFN 177 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p--~v~~~l~~~f~ 177 (443)
......++++|+++++++++|++|++-|-++.+- .=-+.|.+.|+
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~~D~~E~~al~~~fg 347 (437)
T 2gqd_A 301 EGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFG 347 (437)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHhhCCEEEEECCCCcCcCHHHHHHHHHHHh
Confidence 3456789999999999999999999999998752 33345677774
No 138
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=23.69 E-value=63 Score=31.57 Aligned_cols=45 Identities=16% Similarity=0.210 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCc--HHHHHHHHhhhC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRI--PKVQQLLQDFFN 177 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~--p~v~~~l~~~f~ 177 (443)
......++++|+++++++++|++|++-|-++.+ |.=.+.|.+.|+
T Consensus 283 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~gD~~E~~al~~~f~ 329 (424)
T 1tqy_A 283 REMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKRALG 329 (424)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEecCccCcCcCHHHHHHHHHHhc
Confidence 345678999999999999999999999988764 334456777784
No 139
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=23.45 E-value=64 Score=31.76 Aligned_cols=45 Identities=9% Similarity=0.265 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCc--HHHHHHHHhhhC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRI--PKVQQLLQDFFN 177 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~--p~v~~~l~~~f~ 177 (443)
......++++|+++++++++|++|.+-|-++.+ |.=.+.|.+.|+
T Consensus 301 ~~~~~ai~~Al~~Agl~p~dId~ve~HgtgT~~gD~~E~~al~~~fg 347 (438)
T 2iwz_A 301 EGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFK 347 (438)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEEecCCCCcccCHHHHHHHHHHHh
Confidence 456778999999999999999999999998875 223345667774
No 140
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=23.25 E-value=83 Score=29.97 Aligned_cols=44 Identities=14% Similarity=0.157 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHHHHHHcC------CCcCCcceEEEecCCcCcHHHHHHHHhhhC
Q 043979 130 DLFRKCMEHVEKCLRNSK------IDKSQVHDVVLVSGSTRIPKVQQLLQDFFN 177 (443)
Q Consensus 130 ~~~~~i~~~i~~~l~~a~------~~~~~id~ViLvGGssr~p~v~~~l~~~f~ 177 (443)
...+.+...++++|++++ +++++|+.| +-+++.++ -+.+.+.|+
T Consensus 264 ~~~~~~~~~i~~~L~~ag~~~~~~l~~~did~~-~H~~~~~i---~d~~~~~lg 313 (374)
T 2h84_A 264 VIGSGIEAFVDTLLDKAKLQTSTAISAKDCEFL-IHTGGKSI---LMNIENSLG 313 (374)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSCSCCCSSSSEEE-ECCCCHHH---HHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCccccCCChhhcCEe-ECCCCHHH---HHHHHHHcC
Confidence 345667778999999999 999999999 98887653 456777773
No 141
>2a6a_A Hypothetical protein TM0874; glycoprotein endopeptidase, structural genomics, JOI for structural genomics, JCSG; 2.50A {Thermotoga maritima} SCOP: c.55.1.9 c.55.1.9
Probab=23.15 E-value=71 Score=28.28 Aligned_cols=42 Identities=12% Similarity=-0.006 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHH
Q 043979 130 DLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQL 171 (443)
Q Consensus 130 ~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~ 171 (443)
...+.+...|+++|++++++..+||.|.+.=|-+....+|=-
T Consensus 44 ~Hse~L~p~i~~~L~~a~~~~~dld~Iav~~GPGsfTGlRiG 85 (218)
T 2a6a_A 44 KHAEILPVVVKKLLDELDLKVKDLDVVGVGIGPGGLTGLRVG 85 (218)
T ss_dssp GGGGHHHHHHHHHHHHHTCCGGGCSEEEEECCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCchHhHHHH
Confidence 345667788999999999999999999998888776666543
No 142
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=23.12 E-value=69 Score=31.01 Aligned_cols=46 Identities=7% Similarity=0.081 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhh
Q 043979 128 NMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDF 175 (443)
Q Consensus 128 ~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~ 175 (443)
+.-.++.+...++++|+++++++++||.+++-+.++++ +....+..
T Consensus 202 ~~~~~~~~~~~~~~~L~~agl~~~did~~~~H~~~~~~--~~~~~~~l 247 (396)
T 1xpm_A 202 KDAYIRSFQQSWNEYAKRQGKSLADFASLCFHVPFTKM--GKKALESI 247 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSSHHH--HHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEecCCchHH--HHHHHHHH
Confidence 44556778889999999999999999999999888774 44444443
No 143
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=23.09 E-value=1.6e+02 Score=27.93 Aligned_cols=47 Identities=11% Similarity=0.132 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhh
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFF 176 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f 176 (443)
+++-.++.+...++++|++++++++|||.+++--++.++ .+.+.+.+
T Consensus 248 v~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~i---~~~~~~~l 294 (359)
T 3h78_A 248 MFEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLRI---LDAVQEQL 294 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH---HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHH---HHHHHHHh
Confidence 344456777889999999999999999999998877543 46666666
No 144
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=22.92 E-value=1.8e+02 Score=27.10 Aligned_cols=47 Identities=17% Similarity=0.103 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhh
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFF 176 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f 176 (443)
+++-.++.+...++++|+++++++++||.+++--++.+ +.+.+.+.+
T Consensus 218 v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~l 264 (323)
T 3il3_A 218 TFKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANLR---IITATAKKL 264 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHc
Confidence 33445567778899999999999999999999877744 446677666
No 145
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=22.81 E-value=69 Score=31.40 Aligned_cols=46 Identities=15% Similarity=0.146 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHH--HHHHHHhhhCC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPK--VQQLLQDFFNG 178 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~--v~~~l~~~f~~ 178 (443)
......++++|+++++++++||+|++-|-++..-- =...+.+.|++
T Consensus 296 ~~~~~ai~~al~~Agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g~ 343 (430)
T 1ox0_A 296 QGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLGK 343 (430)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHhCcCHHHcCEEEEeCCcCcccCHHHHHHHHHHhCC
Confidence 35677899999999999999999999999987632 22356678864
No 146
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=22.75 E-value=68 Score=31.26 Aligned_cols=45 Identities=13% Similarity=0.132 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHcCCCcCCcceEEEecCCcCc--HHHHHHHHhhhC
Q 043979 133 RKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRI--PKVQQLLQDFFN 177 (443)
Q Consensus 133 ~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~--p~v~~~l~~~f~ 177 (443)
......++++|+++++++++|++|++-|-++.+ +.=-+.|.+.|+
T Consensus 281 ~~~~~ai~~al~~agl~~~dId~ve~Hgtgt~~~D~~E~~al~~~~g 327 (416)
T 1e5m_A 281 RGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALG 327 (416)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEEECCCCcCcCHHHHHHHHHHHc
Confidence 345778999999999999999999999988874 333456777774
No 147
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=22.22 E-value=80 Score=28.93 Aligned_cols=58 Identities=21% Similarity=0.363 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhhhH
Q 043979 135 CMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAAVQ 198 (443)
Q Consensus 135 i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa~~ 198 (443)
....+++.++.. ....+|.|+| |.|.+|++.+.+++.++. . ..-+||-+++|+-+.-+
T Consensus 163 ~~~~l~~~l~~l--~~~g~D~iVL--GCTh~pll~~~i~~~~~~-~-v~vIDs~~~~a~~~~~~ 220 (269)
T 3ist_A 163 AKKVVAESLLPL--KSTKIDTVIL--GCTHYPLLKPIIENFMGD-G-VAVINSGEETASEVSAL 220 (269)
T ss_dssp HHHHHHHHHGGG--GGSCCCEEEE--CSTTGGGGHHHHHHHHCT-T-SEEECTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--HhCCCCEEEE--CCCCHHHHHHHHHHHcCC-C-CeEECcHHHHHHHHHHH
Confidence 344444554432 2346888777 999999999999999952 2 33468888888776643
No 148
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=22.04 E-value=81 Score=29.73 Aligned_cols=43 Identities=12% Similarity=0.230 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHcCCCcCCcceEEEecCCc--CcHHHHHHHHhhhC
Q 043979 135 CMEHVEKCLRNSKIDKSQVHDVVLVSGST--RIPKVQQLLQDFFN 177 (443)
Q Consensus 135 i~~~i~~~l~~a~~~~~~id~ViLvGGss--r~p~v~~~l~~~f~ 177 (443)
.....+++|+++++++++||.|+++.-+. .+|..-..|.+.+|
T Consensus 66 a~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~~P~~a~~v~~~LG 110 (350)
T 4ewp_A 66 AVGAAREALERAGLQGSDLDAVIVSTVTFPHATPSAAALVAHEIG 110 (350)
T ss_dssp HHHHHHHHHHHTTCCGGGCSEEEEECSCCSCSSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCCchHHHHHHHhC
Confidence 35677899999999999999988865443 57888889998885
No 149
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=21.60 E-value=1.6e+02 Score=27.75 Aligned_cols=47 Identities=11% Similarity=0.000 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhh
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFF 176 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f 176 (443)
+++-.++.+...++++|+++++++++||.+++--++.+ +.+.+.+.+
T Consensus 238 v~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---i~~~~~~~L 284 (354)
T 4efi_A 238 IFNFTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLF---MLKHLAKKA 284 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH---HHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH---HHHHHHHHh
Confidence 34445667778899999999999999999999887754 346676666
No 150
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=21.56 E-value=2.2e+02 Score=27.35 Aligned_cols=55 Identities=22% Similarity=0.297 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCC-cCcHHHHHHHHhhhC
Q 043979 123 RFEVLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGS-TRIPKVQQLLQDFFN 177 (443)
Q Consensus 123 efe~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGs-sr~p~v~~~l~~~f~ 177 (443)
..+...+...+-....++++|+++++++++||.|++...+ ..+|.+-..|...+|
T Consensus 94 r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId~vi~~t~t~~~~p~~a~~v~~~LG 149 (393)
T 3ov2_A 94 RQDIVVEEIPRLAKEAAEKAIKEWGRPKSEITHLVFCSISGIDMPGADYRLATLLG 149 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCCEEEEEESSCCCBSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCCCCCHHHHHHHHcC
Confidence 3444455566667788899999999999999998875332 356778888888884
No 151
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=21.39 E-value=77 Score=31.48 Aligned_cols=24 Identities=33% Similarity=0.545 Sum_probs=21.6
Q ss_pred CCcEEEEEEeCCceeEEEEEEEeC
Q 043979 24 GEKNVLIFDLGGGTFDVSLLMIEE 47 (443)
Q Consensus 24 ~~~~vlV~D~GggT~Dvsv~~~~~ 47 (443)
+...++.+|+||.++-|.+++..+
T Consensus 66 E~G~~lalDlGGTn~Rv~~V~l~G 89 (451)
T 1bdg_A 66 ETGNFLALDLGGTNYRVLSVTLEG 89 (451)
T ss_dssp CCEEEEEEEESSSSEEEEEEEECC
T ss_pred ccceEEEEEeCCCeEEEEEEecCC
Confidence 457899999999999999999976
No 152
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=21.36 E-value=69 Score=29.51 Aligned_cols=53 Identities=17% Similarity=0.295 Sum_probs=36.6
Q ss_pred HHHHHHHHHHcCCCcCCcceEEEecCCcCcHHHHHHHHhhhCCccccccCCcchhhhhhhh
Q 043979 136 MEHVEKCLRNSKIDKSQVHDVVLVSGSTRIPKVQQLLQDFFNGKELCKSINPDEVVAYGAA 196 (443)
Q Consensus 136 ~~~i~~~l~~a~~~~~~id~ViLvGGssr~p~v~~~l~~~f~~~~i~~~~~pdeaVa~GAa 196 (443)
...+++.++... .+|.|+| |.|-+|++.+.+++.++. . ..-+||-+++|+-+.
T Consensus 184 ~~~~~~~l~~l~----g~D~iIL--GCTh~PlL~~~i~~~~~~-~-v~lIDs~~~~A~~~~ 236 (274)
T 3uhf_A 184 QSAMEYYFKNIT----TPDALIL--ACTHFPLLGRSLSKYFGD-K-TKLIHSGDAIVEFLK 236 (274)
T ss_dssp HHHHHHHHTTCC----CCSEEEE--CSTTGGGGHHHHHHHHCT-T-CEEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhc----CCCEEEE--CCCChHHHHHHHHHHcCC-C-CEEEcCHHHHHHHHH
Confidence 344444444322 5788777 999999999999999952 2 334688887777654
No 153
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=21.15 E-value=2.6e+02 Score=26.54 Aligned_cols=49 Identities=10% Similarity=0.227 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCC-cCcHHHHHHHHhhhC
Q 043979 129 MDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGS-TRIPKVQQLLQDFFN 177 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGs-sr~p~v~~~l~~~f~ 177 (443)
++..+-....++++|+++++++++|+.|++...+ -.+|..-..|...++
T Consensus 82 ~~~~~la~~Aa~~aL~~agl~~~~id~vi~~t~~~~~~p~~a~~v~~~lG 131 (382)
T 1u0m_A 82 REAKSRVPAVIQRALDDAELLATDIDVIIYVSCTGFMMPSLTAWLINEMG 131 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEEECSSSCCSSCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHCCEEEEEecCCCCCCcHHHHHHHHhC
Confidence 4555666788899999999999999987654332 235667778888884
No 154
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=20.93 E-value=2e+02 Score=27.48 Aligned_cols=51 Identities=12% Similarity=0.154 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCC-cCcHHHHHHHHhhhC
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGS-TRIPKVQQLLQDFFN 177 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGs-sr~p~v~~~l~~~f~ 177 (443)
..+...+-....++++|+++++++++||.|++...+ ...|..-..|...++
T Consensus 94 ~~~~~~~La~~Aa~~aL~~ag~~~~~Id~li~~t~~~~~~p~~a~~v~~~lG 145 (387)
T 3a5r_A 94 QVKGVAELGKEAALKAIKEWGQPKSKITHLIVCCLAGVDMPGADYQLTKLLD 145 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEESSCCEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCCcHHHHHHHHcC
Confidence 344556666778899999999999999998764322 246777788888885
No 155
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=20.59 E-value=2.3e+02 Score=27.19 Aligned_cols=52 Identities=12% Similarity=0.193 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCC-cCcHHHHHHHHhhhC
Q 043979 126 VLNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGS-TRIPKVQQLLQDFFN 177 (443)
Q Consensus 126 ~l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGs-sr~p~v~~~l~~~f~ 177 (443)
...+...+-....++++|+++++++++||.|++.-.+ ...|..-..|...++
T Consensus 102 ~~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 154 (402)
T 1ee0_A 102 LVVTGVPMLGKEAAVKAIDEWGLPKSKITHLIFCTTAGVDMPGADYQLVKLLG 154 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEECSSCCEESCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCCChHHHHHHHHcC
Confidence 3345556666778899999999999999997764322 246777778888884
No 156
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=20.39 E-value=2.7e+02 Score=26.74 Aligned_cols=51 Identities=14% Similarity=0.224 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCC-cCcHHHHHHHHhhhC
Q 043979 127 LNMDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGS-TRIPKVQQLLQDFFN 177 (443)
Q Consensus 127 l~~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGs-sr~p~v~~~l~~~f~ 177 (443)
..+...+-....++++|+++++++++||.|++...+ ...|..-..|...++
T Consensus 111 ~~~~~~~La~~Aa~~aL~~agl~~~~Id~vi~~t~~~~~~p~~a~~v~~~lG 162 (402)
T 3awk_A 111 AVLEVPKLAKEAAISAIKQWGQPKSKITHLVFATTSGVDMPGADFQLAKLLG 162 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCGGGCCEEEEEECSCCCSSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEEeCCCcCChHHHHHHHHcC
Confidence 344555666778899999999999999998864321 256777788888885
No 157
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=20.19 E-value=2.3e+02 Score=28.08 Aligned_cols=49 Identities=12% Similarity=0.188 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCcCCcceEEEecCC-cCcHHHHHHHHhhhC
Q 043979 129 MDLFRKCMEHVEKCLRNSKIDKSQVHDVVLVSGS-TRIPKVQQLLQDFFN 177 (443)
Q Consensus 129 ~~~~~~i~~~i~~~l~~a~~~~~~id~ViLvGGs-sr~p~v~~~l~~~f~ 177 (443)
+...+-....++++|+++++++++||.|++.--+ ..+|..-..|.+.+|
T Consensus 108 ~~a~~La~~Aa~~AL~~agi~~~dId~li~~t~t~~~~P~~a~~v~~~LG 157 (465)
T 3e1h_A 108 SDGVPLAVEASRKAMAEARLVPAQITHMVSTTCTDSANPGYDHYVAKELG 157 (465)
T ss_dssp HHTHHHHHHHHHHHHHHHTCCGGGCCEEEEECSSCCCSSCHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeeCCCCCCcHHHHHHHHhC
Confidence 4445566778899999999999999998875432 257888888888885
No 158
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=20.05 E-value=48 Score=36.24 Aligned_cols=77 Identities=10% Similarity=0.066 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHcC--C--Cc--C-CcceEEEecCCcCc-HHHHHHHHhhh----CCccccccCCcchhhhh
Q 043979 126 VLNMDLFRKCMEHVEKCLRNSK--I--DK--S-QVHDVVLVSGSTRI-PKVQQLLQDFF----NGKELCKSINPDEVVAY 193 (443)
Q Consensus 126 ~l~~~~~~~i~~~i~~~l~~a~--~--~~--~-~id~ViLvGGssr~-p~v~~~l~~~f----~~~~i~~~~~pdeaVa~ 193 (443)
.++..+++|....+-..+...- + ++ . .-..|++-||-++. |.+++.+++.+ +...+. -.-.+.+..+
T Consensus 373 ~~a~~v~~raa~llA~gia~ii~~l~~dp~~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~~~~~-i~~a~dgs~~ 451 (917)
T 1cza_N 373 HVCTIVSFRSANLVAATLGAILNRLRDNKGTPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVR-FLLSESGSGK 451 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTTEEEE-EEECTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCcccCcceEEEECCchhhccHHHHHHHHHHHHHhcCCCceE-EEEeccchHH
Confidence 4556666666555444333210 1 11 1 11345555555554 55555555544 222211 1224788999
Q ss_pred hhhhHHHHHh
Q 043979 194 GAAVQASILS 203 (443)
Q Consensus 194 GAa~~a~~l~ 203 (443)
|||+.|+.-+
T Consensus 452 GAA~laa~~~ 461 (917)
T 1cza_N 452 GAAMVTAVAY 461 (917)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHhHh
Confidence 9999997544
Done!