BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043981
(161 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 66.6 bits (161), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 74/141 (52%), Gaps = 11/141 (7%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
A + DF +AKL+ +D + TIG++APEY G+ S DV+ +G+ML+E TG
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXA-VRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 239
Query: 63 KKPTD--EIFN-EEMTLKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
++ D + N +++ L WV L +E +VDV+L K++ V + +A
Sbjct: 240 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVA 293
Query: 119 MACTVESPEQRINAKEIVTKL 139
+ CT SP +R E+V L
Sbjct: 294 LLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
A + DF +AKL+ +D + IG++APEY G+ S DV+ +G+ML+E TG
Sbjct: 173 AVVGDFGLAKLMDYKDXHVXXA-VRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITG 231
Query: 63 KKPTDEIF---NEEMTLKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
++ D ++++ L WV L +E +VDV+L K++ V + +A
Sbjct: 232 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGN------YKDEEVEQLIQVA 285
Query: 119 MACTVESPEQRINAKEIVTKL 139
+ CT SP +R E+V L
Sbjct: 286 LLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 11/152 (7%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
V ++DF I+K T DQ+ T+GY+ PEY +GR++ DVYSFG++L E
Sbjct: 176 FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 61 TGKKPTDEIFNEEMT-LKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ + EM L W + +E +VD NL + + E F + A
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRKF-GDTA 289
Query: 119 MACTVESPEQRINAKEIVTKL---LKIRDSLL 147
+ C S E R + +++ KL L++++S++
Sbjct: 290 VKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 11/152 (7%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
V ++DF I+K T Q+ T+GY+ PEY +GR++ DVYSFG++L E
Sbjct: 176 FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 61 TGKKPTDEIFNEEMT-LKHWVNDWLPISTME-VVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ + EM L W + +E +VD NL + + E F + A
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK-----IRPESLRKF-GDTA 289
Query: 119 MACTVESPEQRINAKEIVTKL---LKIRDSLL 147
+ C S E R + +++ KL L++++S++
Sbjct: 290 VKCLALSSEDRPSMGDVLWKLEYALRLQESVI 321
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 7 DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF IA+ + S+TQT + T Y++PE R V A DVYS G +L E TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66 TDEIFNEEMTLKHWVNDWLPIST 88
+ + +H D +P S
Sbjct: 219 FTGDSPDSVAYQHVREDPIPPSA 241
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
++ + DF +++ + D T+ I +M PE + + DV+SFG++L E F
Sbjct: 170 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
T GK+P W +S EV++ ++Q + C V+++ +
Sbjct: 230 TYGKQP-----------------WFQLSNTEVIEC--ITQGRV-LERPRVCPKEVYDVML 269
Query: 120 ACTVESPEQRINAKEI 135
C P+QR+N KEI
Sbjct: 270 GCWQREPQQRLNIKEI 285
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7 DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF IA+ + S+TQT + T Y++PE R V A DVYS G +L E TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66 TDEIFNEEMTLKHWVNDWLPIST 88
+ +H D +P S
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7 DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF IA+ + S+TQT + T Y++PE R V A DVYS G +L E TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66 TDEIFNEEMTLKHWVNDWLPIST 88
+ +H D +P S
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7 DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF IA+ + S+TQT + T Y++PE R V A DVYS G +L E TG+ P
Sbjct: 159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66 TDEIFNEEMTLKHWVNDWLPIST 88
+ +H D +P S
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 7 DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF IA+ + S+TQT + T Y++PE R V A DVYS G +L E TG+ P
Sbjct: 176 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 66 TDEIFNEEMTLKHWVNDWLPIST 88
+ +H D +P S
Sbjct: 236 FTGDSPVSVAYQHVREDPIPPSA 258
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
A +SDF +A+ Q++ ++ + T YMAPE R G ++ D+YSFG++L+E TG
Sbjct: 172 AKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
Query: 63 KKPTDE 68
DE
Sbjct: 231 LPAVDE 236
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
A +SDF +A+ Q++ + + T YMAPE R G ++ D+YSFG++L+E TG
Sbjct: 172 AKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 230
Query: 63 KKPTDE 68
DE
Sbjct: 231 LPAVDE 236
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 7 DFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF IA+ + S+ QT + T Y++PE R V A DVYS G +L E TG+ P
Sbjct: 159 DFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 66 TDEIFNEEMTLKHWVNDWLPIST 88
+ +H D +P S
Sbjct: 219 FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
+V + DF +++ + D +T+ I +M PE + + DV+SFG++L E F
Sbjct: 166 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 225
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
T GK+P W +S E +D +E C V+ +
Sbjct: 226 TYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRACPPEVYAIMR 265
Query: 120 ACTVESPEQRINAKEIVTKL 139
C P+QR + K++ +L
Sbjct: 266 GCWQREPQQRHSIKDVHARL 285
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
+V + DF +++ + D +T+ I +M PE + + DV+SFG++L E F
Sbjct: 172 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 231
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
T GK+P W +S E +D +E C V+ +
Sbjct: 232 TYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRACPPEVYAIMR 271
Query: 120 ACTVESPEQRINAKEIVTKL 139
C P+QR + K++ +L
Sbjct: 272 GCWQREPQQRHSIKDVHARL 291
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
A +SDF +A+ Q + + + T YMAPE R G ++ D+YSFG++L+E TG
Sbjct: 166 AKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITG 224
Query: 63 KKPTDE 68
DE
Sbjct: 225 LPAVDE 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
+V + DF +++ + D +T+ I +M PE + + DV+SFG++L E F
Sbjct: 195 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIF 254
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
T GK+P W +S E +D +E C V+ +
Sbjct: 255 TYGKQP-----------------WYQLSNTEAIDCITQGRE---LERPRACPPEVYAIMR 294
Query: 120 ACTVESPEQRINAKEIVTKL 139
C P+QR + K++ +L
Sbjct: 295 GCWQREPQQRHSIKDVHARL 314
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
A +SDF +A+ Q + ++ + T Y APE R G ++ D+YSFG++L+E
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEII 219
Query: 61 TGKKPTDE 68
TG DE
Sbjct: 220 TGLPAVDE 227
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 21/143 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + + + + APE GR S+ DV+SFGI+L ETF+
Sbjct: 251 VLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + N++ T E V+ + E C VF L
Sbjct: 311 LGASPYPNLSNQQ--------------TREFVE------KGGRLPCPELCPDAVFRLMEQ 350
Query: 121 CTVESPEQRINAKEIVTKLLKIR 143
C P QR + I +L IR
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 7 DFSIAKLLTGEDQSMTQT-QTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF IAK L+ + S+TQT L T+ Y +PE + D+YS GI+L E G+ P
Sbjct: 154 DFGIAKALS--ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
Query: 66 TDEIFNEE----MTLKHWVNDWLPISTMEV 91
FN E + +KH + D +P T +V
Sbjct: 212 ----FNGETAVSIAIKH-IQDSVPNVTTDV 236
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 21/143 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + + + + APE GR S+ DV+SFGI+L ETF+
Sbjct: 251 VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + N++ T E V+ + E C VF L
Sbjct: 311 LGASPYPNLSNQQ--------------TREFVE------KGGRLPCPELCPDAVFRLMEQ 350
Query: 121 CTVESPEQRINAKEIVTKLLKIR 143
C P QR + I +L IR
Sbjct: 351 CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 69/146 (47%), Gaps = 24/146 (16%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
+ +SDF + + + +DQ ++ T + + APE + S+ DV++FGI++ E F
Sbjct: 141 LCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVS-FVFNLA 118
+ GK P D N E+ LK +SQ H + + S ++ +
Sbjct: 200 SLGKMPYDLYTNSEVVLK-------------------VSQG--HRLYRPHLASDTIYQIM 238
Query: 119 MACTVESPEQRINAKEIVTKLLKIRD 144
+C E PE+R +++++ + +R+
Sbjct: 239 YSCWHELPEKRPTFQQLLSSIEPLRE 264
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.2 bits (108), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+SD + + + D +L I +MAPE G+ S + D++S+G++L E F+ G
Sbjct: 169 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P N+++ V ++ + + C ++V+ L + C
Sbjct: 229 QPYCGYSNQDV-------------------VEMIRNRQV-LPCPDDCPAWVYALMIECWN 268
Query: 124 ESPEQRINAKEIVTKL 139
E P +R K+I ++L
Sbjct: 269 EFPSRRPRFKDIHSRL 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 21/136 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+SD + + + D +L I +MAPE G+ S + D++S+G++L E F+ G
Sbjct: 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 245
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P N+++ V ++ + + C ++V+ L + C
Sbjct: 246 QPYCGYSNQDV-------------------VEMIRNRQV-LPCPDDCPAWVYALMIECWN 285
Query: 124 ESPEQRINAKEIVTKL 139
E P +R K+I ++L
Sbjct: 286 EFPSRRPRFKDIHSRL 301
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.8 bits (107), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
++ + DF +++ + D T+ I +M PE + + DV+S G++L E F
Sbjct: 165 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIF 224
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
T GK+P W +S EV++ ++Q + C V+ L +
Sbjct: 225 TYGKQP-----------------WYQLSNNEVIEC--ITQGRV-LQRPRTCPQEVYELML 264
Query: 120 ACTVESPEQRINAKEIVTKL 139
C P R N K I T L
Sbjct: 265 GCWQREPHMRKNIKGIHTLL 284
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 25/151 (16%)
Query: 1 MVAHLSDFSIAKLLTGEDQS-MTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T + I + APE + ++ DV+SFGI++ E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
T G++P E+ N E+ +ND + T C S ++ L
Sbjct: 244 MTYGERPYWELSNHEVMKA--INDGFRLPT------------------PMDCPSAIYQLM 283
Query: 119 MACTVESPEQRINAKEIVT---KLLKIRDSL 146
M C + +R +IV+ KL++ DSL
Sbjct: 284 MQCWQQERARRPKFADIVSILDKLIRAPDSL 314
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 148 LVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 206 TTKGRVPYPGMVNREV 221
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 144 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 201
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 202 TTKGRVPYPGMVNREV 217
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 141 LVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 198
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 199 TTKGRVPYPGMVNREV 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 140 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 197
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 198 TTKGRVPYPGMVNREV 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 148 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 205
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 206 TTKGRVPYPGMVNREV 221
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 142 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 200 TTKGRVPYPGMVNREV 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 317 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 375 TTKGRVPYPGMVNREV 390
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 317 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 375 TTKGRVPYPGMVNREV 390
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 317 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 374
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 375 TTKGRVPYPGMVNREV 390
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF + + + +DQ + T T + + +PE R S+ DV+SFG+++ E F+
Sbjct: 142 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 200
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E+ V D IST + V+ +
Sbjct: 201 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 240
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
C E PE R ++ +L +I +S L
Sbjct: 241 CWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 151 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 208
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 209 TTKGRVPYPGMVNREV 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF + + + +DQ + T T + + +PE R S+ DV+SFG+++ E F+
Sbjct: 144 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 202
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E+ V D IST + V+ +
Sbjct: 203 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 242
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
C E PE R ++ +L +I +S L
Sbjct: 243 CWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V ++DF +A+++ ED T + I + APE G + DV+SFGI+LME
Sbjct: 148 LVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 205
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
T G+ P + N E+ I +E E C ++N+
Sbjct: 206 VTYGRIPYPGMSNPEV-----------IRALE---------RGYRMPRPENCPEELYNIM 245
Query: 119 MACTVESPEQR 129
M C PE+R
Sbjct: 246 MRCWKNRPEER 256
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 150 AKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 210 YGQKPYRGMKGSEVT 224
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 400 LVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 457
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 458 TTKGRVPYPGMVNREV 473
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF + + + +DQ + T T + + +PE R S+ DV+SFG+++ E F+
Sbjct: 161 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 219
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E+ V D IST + V+ +
Sbjct: 220 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 259
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
C E PE R ++ +L +I +S L
Sbjct: 260 CWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF + + + +DQ + T T + + +PE R S+ DV+SFG+++ E F+
Sbjct: 139 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 197
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E+ V D IST + V+ +
Sbjct: 198 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 237
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
C E PE R ++ +L +I +S L
Sbjct: 238 CWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 146 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 205
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 206 YGQKPYRGMKGSEVT 220
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 22/147 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF + + + +DQ + T T + + +PE R S+ DV+SFG+++ E F+
Sbjct: 141 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E+ V D IST + V+ +
Sbjct: 200 EGKIPYENRSNSEV-----VED---IST------------GFRLYKPRLASTHVYQIMNH 239
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLL 147
C E PE R ++ +L +I +S L
Sbjct: 240 CWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
++ ++DF +A+L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 142 LICKIADFGLARLI--EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 199
Query: 60 FT-GKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 200 VTKGRVPYPGMNNREV 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 144 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 203
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 204 YGQKPYRGMKGSEVT 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 150 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 209
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 210 YGQKPYRGMKGSEVT 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA +SDF + K + S TQ + + APE RE + S DV+SFGI+L E ++
Sbjct: 140 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
Query: 62 -GKKPTDEI 69
G+ P I
Sbjct: 195 FGRVPYPRI 203
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 24/131 (18%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V ++DF +A+++ ED T + I + APE G + DV+SFGI+LME
Sbjct: 321 LVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
T G+ P + N E+ I +E E C ++N+
Sbjct: 379 VTYGRIPYPGMSNPEV-----------IRALE---------RGYRMPRPENCPEELYNIM 418
Query: 119 MACTVESPEQR 129
M C PE+R
Sbjct: 419 MRCWKNRPEER 429
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 156 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 215
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 216 YGQKPYRGMKGSEVT 230
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 226 YGQKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 166 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 225
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 226 YGQKPYRGMKGSEVT 240
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 164 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 223
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 224 YGQKPYRGMKGSEVT 238
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA +SDF + K + S TQ + + APE RE + S DV+SFGI+L E ++
Sbjct: 155 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
Query: 62 -GKKPTDEI 69
G+ P I
Sbjct: 210 FGRVPYPRI 218
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA +SDF + K + S TQ + + APE RE + S DV+SFGI+L E ++
Sbjct: 327 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
Query: 62 -GKKPTDEI 69
G+ P I
Sbjct: 382 FGRVPYPRI 390
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLME- 58
+V ++DF + +L+ ED T Q I + APE GR + DV+SFGI+L E
Sbjct: 318 LVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTEL 375
Query: 59 TFTGKKPTDEIFNEEM 74
T G+ P + N E+
Sbjct: 376 TTKGRVPYPGMVNREV 391
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF + + + +DQ + T T + + +PE R S+ DV+SFG+++ E F+
Sbjct: 141 VIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS 199
Query: 62 -GKKPTDEIFNEEM 74
GK P + N E+
Sbjct: 200 EGKIPYENRSNSEV 213
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA +SDF + K + S TQ + + APE RE S DV+SFGI+L E ++
Sbjct: 146 VAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
Query: 62 -GKKPTDEI 69
G+ P I
Sbjct: 201 FGRVPYPRI 209
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 508 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 567
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 568 YGQKPYRGMKGSEVT 582
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 3 AHLSDFSIAKLLTG-EDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L E+ QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 509 AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFS 568
Query: 62 -GKKPTDEIFNEEMT 75
G+KP + E+T
Sbjct: 569 YGQKPYRGMKGSEVT 583
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF +A++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + D + L + +MAPE ++G + + D++SFG++
Sbjct: 159 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 218
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 219 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 258
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P+ R EIV L
Sbjct: 259 TDLMRMCWQFNPKMRPTFLEIVNLL 283
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 42.7 bits (99), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + D + L + +MAPE ++G + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P+ R EIV L
Sbjct: 262 TDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + D + L + +MAPE ++G + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P R EIV L
Sbjct: 262 TDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 64/159 (40%), Gaps = 26/159 (16%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
A L+DF +A LT D + + T +MAPE +E + D++S GI +E G
Sbjct: 164 AKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEG 221
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
K P +I P+ + ++ N F E + C
Sbjct: 222 KPPYADIH--------------PMRAIFMIPTNPPPT----FRKPELWSDNFTDFVKQCL 263
Query: 123 VESPEQRINAKEIVTKLLKIRDSLLRNVGGRCIRQSNLN 161
V+SPEQR A ++ ++ +R+ G I + +N
Sbjct: 264 VKSPEQRATATQL------LQHPFVRSAKGVSILRDLIN 296
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + D + L + +MAPE ++G + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P+ R EIV L
Sbjct: 262 TDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 22/152 (14%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
+VA + I T D T + +MAPE S DV+S+GI+L E
Sbjct: 138 LVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
Query: 61 TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
T +KP DEI + V++ T + NL + +L
Sbjct: 198 TRRKPFDEIGGPAFRIMWAVHN----GTRPPLIKNLPKP--------------IESLMTR 239
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLLRNVGG 152
C + P QR + +EIV KI L+R G
Sbjct: 240 CWSKDPSQRPSMEEIV----KIMTHLMRYFPG 267
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 242 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 281
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 282 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 325
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIMLM 57
+V +SDF +++ L + T T L I + APE + + ++ DV+S+GI++
Sbjct: 146 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 205
Query: 58 ETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
E + G++P ++ N+++ +N + Q D C S +
Sbjct: 206 EVMSYGERPYWDMTNQDV-------------------INAIEQ-DYRLPPPMDCPSALHQ 245
Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
L + C + R +IV L D ++RN
Sbjct: 246 LMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 274
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ ++DF +A+ E T+ +MAPE R S DV+S+G++L E T
Sbjct: 154 ILKITDFGLAR----EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209
Query: 62 GKKP 65
G+ P
Sbjct: 210 GEVP 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 22/152 (14%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
+VA + I T D T + +MAPE S DV+S+GI+L E
Sbjct: 139 LVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 198
Query: 61 TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
T +KP DEI + V++ T + NL + +L
Sbjct: 199 TRRKPFDEIGGPAFRIMWAVHN----GTRPPLIKNLPKP--------------IESLMTR 240
Query: 121 CTVESPEQRINAKEIVTKLLKIRDSLLRNVGG 152
C + P QR + +EIV KI L+R G
Sbjct: 241 CWSKDPSQRPSMEEIV----KIMTHLMRYFPG 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 157 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 257 NPSDRPSFAEI 267
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 215 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 254
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 255 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 298
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 215 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 254
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 255 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 298
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 232 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 271
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 272 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 315
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 153 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 212 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 252
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 253 NPSDRPSFAEI 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + D + L + +MAPE ++G + + D++SFG++
Sbjct: 161 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 220
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 221 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 260
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P+ R EIV L
Sbjct: 261 TDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + D + L + +MAPE ++G + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P R EIV L
Sbjct: 262 TDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + D + L + +MAPE ++G + + D++SFG++
Sbjct: 163 MVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 222
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 223 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 262
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P R EIV L
Sbjct: 263 TDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIMLM 57
+V +SDF +++ L + T T L I + APE + + ++ DV+S+GI++
Sbjct: 172 LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW 231
Query: 58 ETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
E + G++P ++ N+++ +N + Q D C S +
Sbjct: 232 EVMSYGERPYWDMTNQDV-------------------INAIEQ-DYRLPPPMDCPSALHQ 271
Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
L + C + R +IV L D ++RN
Sbjct: 272 LMLDCWQKDRNHRPKFGQIVNTL----DKMIRN 300
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 257 NPSDRPSFAEI 267
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 252 NPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 156 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 214
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 215 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 255
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 256 NPSDRPSFAEI 266
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 252 NPSDRPSFAEI 262
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 257 NPSDRPSFAEI 267
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 154 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 213 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 254 NPSDRPSFAEI 264
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF + ++L + ++ T+ I + +PE + ++ DV+S+GI+L E
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+++ ++ VD E C + ++ L
Sbjct: 244 MSYGERPYWEMSNQDV--------------IKAVD------EGYRLPPPMDCPAALYQLM 283
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRNVGGRCI------RQSNL 160
+ C + R ++IV+ I D L+RN G I R SNL
Sbjct: 284 LDCWQKDRNNRPKFEQIVS----ILDKLIRNPGSLKIITSAAARPSNL 327
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 154 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 213 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 254 NPSDRPSFAEI 264
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 252 NPSDRPSFAEI 262
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L
Sbjct: 356 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW------- 407
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
EI M+ P +++ V L ++D E C V+ L AC
Sbjct: 408 ---EIATYGMS---------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 455
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 456 NPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L
Sbjct: 398 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW------- 449
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
EI M+ P +++ V L ++D E C V+ L AC
Sbjct: 450 ---EIATYGMS---------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 497
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 498 NPSDRPSFAEI 508
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 165 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 223
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 224 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 264
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 265 NPSDRPSFAEI 275
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 252 NPSDRPSFAEI 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L
Sbjct: 359 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW------- 410
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
EI M+ P +++ V L ++D E C V+ L AC
Sbjct: 411 ---EIATYGMS---------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 458
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 459 NPSDRPSFAEI 469
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 252 NPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 257 NPSDRPSFAEI 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 152 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 211 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 251
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 252 NPSDRPSFAEI 262
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 157 VADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 216 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 256
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 257 NPSDRPSFAEI 267
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 173 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 233 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 272
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 273 YNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A+L DF IA T D+ +TQ T+ T+ Y APE E + D+Y+ +L E T
Sbjct: 173 AYLVDFGIASATT--DEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLT 230
Query: 62 GKKP 65
G P
Sbjct: 231 GSPP 234
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 20/134 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ ++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 150 LVKVADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Query: 62 GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMAC 121
P +++ V L ++D E C V+ L AC
Sbjct: 209 YGMS-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRAC 249
Query: 122 TVESPEQRINAKEI 135
+P R + EI
Sbjct: 250 WQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 154 VADFGLSRLMTG-DTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P +++ V L ++D E C V+ L AC
Sbjct: 213 S-------------------PYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 253
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 254 NPSDRPSFAEI 264
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 150 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P ++ V L ++D E C V+ L AC
Sbjct: 209 S-------------------PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 249
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 250 NPSDRPSFAEI 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 150 VADFGLSRLMTG-DTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P ++ V L ++D E C V+ L AC
Sbjct: 209 S-------------------PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 249
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 250 NPSDRPSFAEI 260
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + S+ + + T+ YM PE ++ S NG DV+S G
Sbjct: 151 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 210
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 211 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 258
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 259 ------CCLKRDPKQRISIPELLA 276
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 226 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 265
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 266 YNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 173 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 232
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 233 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 272
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 273 YNPKMRPSFLEIISSIKEEMEPGFREV 299
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 152 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 209
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 210 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 249
Query: 123 VESPEQR 129
E PE R
Sbjct: 250 KERPEDR 256
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 201 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 260
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 261 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 300
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 301 YNPKMRPSFLEIISSIKEEMEPGFREV 327
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 150 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
E PE R
Sbjct: 248 KERPEDR 254
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 143 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 202
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 203 ELMTGQLPYSNINNRDQII 221
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 150 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
E PE R
Sbjct: 248 KERPEDR 254
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 201 ELMTGQLPYSNINNRDQII 219
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 201 ELMTGQLPYSNINNRDQII 219
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 169 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 228
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 229 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 268
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 269 YNPKMRPSFLEIISSIKEEMEPGFREV 295
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 232 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 271
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 272 YNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 151 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 208
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 209 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 248
Query: 123 VESPEQR 129
E PE R
Sbjct: 249 KERPEDR 255
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + S+ + + T+ YM PE ++ S NG DV+S G
Sbjct: 147 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 206
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 207 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 254
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 255 ------CCLKRDPKQRISIPELLA 272
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 156 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 214 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 253
Query: 123 VESPEQR 129
E PE R
Sbjct: 254 KERPEDR 260
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q ++ +MAPE R S DVYS+GI+L
Sbjct: 169 LTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY 228
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 229 ELMTGELPYSHINNRDQII 247
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 146 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 205
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 206 ELMTGQLPYSNINNRDQII 224
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 170 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 229
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 230 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 269
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 270 YNPKMRPSFLEIISSIKEEMEPGFREV 296
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 146 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 205
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 206 ELMTGQLPYSNINNRDQII 224
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 239 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 278
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 279 YNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 155 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 212
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 213 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 252
Query: 123 VESPEQR 129
E PE R
Sbjct: 253 KERPEDR 259
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 239 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 278
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 279 YNPKMRPSFLEIISSIKEEMEPGFREV 305
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 150 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
E PE R
Sbjct: 248 KERPEDR 254
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 172 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 231
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C +F L C
Sbjct: 232 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLFELMRMCWQ 271
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 272 YNPKMRPSFLEIISSIKEEMEPGFREV 298
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 159 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 216
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 217 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 256
Query: 123 VESPEQR 129
E PE R
Sbjct: 257 KERPEDR 263
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 158 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 215
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 216 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 255
Query: 123 VESPEQR 129
E PE R
Sbjct: 256 KERPEDR 262
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 156 IADFGLARLI--EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 213
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 214 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 253
Query: 123 VESPEQR 129
E PE R
Sbjct: 254 KERPEDR 260
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 168 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 227
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 228 ELMTGQLPYSNINNRDQII 246
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + S+ + + T+ YM PE ++ S NG DV+S G
Sbjct: 167 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 227 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 274
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 275 ------CCLKRDPKQRISIPELLA 292
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 146 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 203
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 204 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 243
Query: 123 VESPEQR 129
E PE R
Sbjct: 244 KERPEDR 250
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 160 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 217
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 218 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 257
Query: 123 VESPEQR 129
E PE R
Sbjct: 258 KERPEDR 264
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +A+LL G+++ I +MA E + + DV+S+G+ + E T G
Sbjct: 181 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 240
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E+ + LP + +DV ++
Sbjct: 241 KPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 274
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +A+LL G+++ I +MA E + + DV+S+G+ + E T G
Sbjct: 158 ITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGG 217
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E+ + LP + +DV ++
Sbjct: 218 KPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV 251
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 150 IADFGLARLI--EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 207
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 208 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 247
Query: 123 VESPEQR 129
E PE R
Sbjct: 248 KERPEDR 254
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 169 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 228
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 229 ELMTGQLPYSNINNRDQII 247
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + S+ + + T+ YM PE ++ S NG DV+S G
Sbjct: 148 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 207
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 208 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 255
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 256 ------CCLKRDPKQRISIPELLA 273
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 24/127 (18%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
++DF +A+L+ ED T + I + APE G + DV+SFGI+L E T G
Sbjct: 145 IADFGLARLI--EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHG 202
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
+ P + N E+ I +E V + C ++ L C
Sbjct: 203 RIPYPGMTNPEV-----------IQNLE---------RGYRMVRPDNCPEELYQLMRLCW 242
Query: 123 VESPEQR 129
E PE R
Sbjct: 243 KERPEDR 249
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 20/131 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +++L+TG D I + APE + S DV++FG++L E T
Sbjct: 150 VADFGLSRLMTG-DTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P ++ V L ++D E C V+ L AC
Sbjct: 209 S-------------------PYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQW 249
Query: 125 SPEQRINAKEI 135
+P R + EI
Sbjct: 250 NPSDRPSFAEI 260
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 26/140 (18%)
Query: 3 AHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMET 59
A ++DFS+++ QS+ + + L +MAPE E + D YSF ++L
Sbjct: 168 AKVADFSLSQ------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 60 FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
TG+ P DE S ++ +N++ +E + E C + N+
Sbjct: 222 LTGEGPFDE-----------------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIE 264
Query: 120 ACTVESPEQRINAKEIVTKL 139
C P++R + IV +L
Sbjct: 265 LCWSGDPKKRPHFSYIVKEL 284
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + S+ + + T+ YM PE ++ S NG DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 255 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 302
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 303 ------CCLKRDPKQRISIPELLA 320
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.7 bits (91), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 182 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 242 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 281
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 282 CWHAVPSQRPTFKQLVEDLDRI 303
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 188 VMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 248 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 287
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + S+ + + T+ YM PE ++ S NG DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 255 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 302
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 303 ------CCLKRDPKQRISIPELLA 320
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + APE + ++ DV+S+GI++ E
Sbjct: 161 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEV 220
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P E+ N+ DV +E + C + ++ L
Sbjct: 221 VSYGERPYWEMTNQ--------------------DVIKAVEEGYRLPSPMDCPAALYQLM 260
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
+ C + R EIV L D L+RN
Sbjct: 261 LDCWQKERNSRPKFDEIVNML----DKLIRN 287
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 187 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 247 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 286
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 287 CWHAVPSQRPTFKQLVEDLDRI 308
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 184 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 244 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 283
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 284 CWHAVPSQRPTFKQLVEDLDRI 305
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 20/139 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + T + +MAPE + S DV+S+G++L E F+
Sbjct: 237 VVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + +E D +E + A E ++ + +
Sbjct: 297 LGGSPYPGVQMDE-------------------DFCSRLREGMRMRAPEYSTPEIYQIMLD 337
Query: 121 CTVESPEQRINAKEIVTKL 139
C P++R E+V KL
Sbjct: 338 CWHRDPKERPRFAELVEKL 356
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFT 61
+ DF +A + + S Q +I +MAPE R S DVY+FGI+L E T
Sbjct: 149 IGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 208
Query: 62 GKKPTDEIFNEEMTLK 77
G+ P I N + ++
Sbjct: 209 GQLPYSNINNRDQIIE 224
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 195 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 255 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 294
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 295 CWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 173 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 233 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 272
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 273 CWHAVPSQRPTFKQLVEDLDRI 294
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 241 VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I EE+ L +E C + ++ +
Sbjct: 301 LGGSPYPGIPVEELF--------------------KLLKEGHRMDKPANCTNELYMMMRD 340
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 341 CWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQE 100
KP D I E++ + LP + +DV ++ ++
Sbjct: 218 KPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 254
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 248 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 287
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 177 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 237 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 276
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 277 CWHAVPSQRPTFKQLVEDLDRI 298
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 181 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 241 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 280
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 281 CWHAVPSQRPTFKQLVEDLDRI 302
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 248 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 287
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
+ DF + + L +D + Q + APE + S D + FG+ L E FT G
Sbjct: 152 IGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 211
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
++P W+ ++ ++ ++ + +E E C ++N+ + C
Sbjct: 212 QEP-----------------WIGLNGSQI--LHKIDKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
PE R + +RD LL
Sbjct: 253 AHKPEDR-------PTFVALRDFLL 270
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
+ DF + + L +D + Q + APE + S D + FG+ L E FT G
Sbjct: 156 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 215
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
++P W+ ++ ++ ++ + +E E C ++N+ + C
Sbjct: 216 QEP-----------------WIGLNGSQI--LHKIDKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
PE R + +RD LL
Sbjct: 257 AHKPEDR-------PTFVALRDFLL 274
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 21/130 (16%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
MV ++DF +++ + D I +M PE R + DV+++G++L E F
Sbjct: 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
+ G +P + +EE+ V D N+L+ E C ++NL
Sbjct: 271 SYGLQPYYGMAHEEVIYY-------------VRDGNILA-------CPENCPLELYNLMR 310
Query: 120 ACTVESPEQR 129
C + P R
Sbjct: 311 LCWSKLPADR 320
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 180 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 240 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 279
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 280 CWHAVPSQRPTFKQLVEDLDRI 301
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE EG + DV+S+GI+L E F+
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 1 MVAH-----LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIM 55
MVAH + DF + + + + L + +MAPE ++G + + D++SFG++
Sbjct: 162 MVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 221
Query: 56 LME-TFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFV 114
L E T ++P + NE++ LK V+D L Q D C V
Sbjct: 222 LWEITSLAEQPYQGLSNEQV-LKF------------VMDGGYLDQPD-------NCPERV 261
Query: 115 FNLAMACTVESPEQRINAKEIVTKL 139
+L C +P+ R EIV L
Sbjct: 262 TDLMRMCWQFNPKMRPTFLEIVNLL 286
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 221 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 28/153 (18%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIMLM 57
+V +SDF +++ L T+T +L I + APE + ++ D +S+GI++
Sbjct: 155 LVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 214
Query: 58 ETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
E + G++P ++ N+++ +N + Q D C + +
Sbjct: 215 EVMSFGERPYWDMSNQDV-------------------INAIEQ-DYRLPPPPDCPTSLHQ 254
Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
L + C + R ++V+ L D ++RN
Sbjct: 255 LMLDCWQKDRNARPRFPQVVSAL----DKMIRN 283
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 168 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 227
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 228 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 261
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
+ DF + + L +D + Q + APE + S D + FG+ L E FT G
Sbjct: 162 IGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 221
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
++P W+ ++ ++ ++ + +E E C ++N+ + C
Sbjct: 222 QEP-----------------WIGLNGSQI--LHKIDKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
PE R + +RD LL
Sbjct: 263 AHKPEDR-------PTFVALRDFLL 280
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 164 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 223
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 224 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 257
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 152 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 212 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 245
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 221 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 220 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 188 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 248 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 287
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 288 CWHAVPSQRPTFKQLVEDLDRI 309
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 221 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 218 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 160 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 220 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 218 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 161 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 221 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 219 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 218 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 155 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 214
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 215 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 248
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 162 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 222 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 255
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 192 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 251
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 252 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 285
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 19/132 (14%)
Query: 10 IAKLLTGEDQSMTQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMETFTGKKPTD 67
+A T + + + L +MAPE E + D YSF ++L TG+ P D
Sbjct: 170 VADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
Query: 68 EIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPE 127
E S ++ +N++ +E + E C + N+ C P+
Sbjct: 230 E-----------------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPK 272
Query: 128 QRINAKEIVTKL 139
+R + IV +L
Sbjct: 273 KRPHFSYIVKEL 284
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 225 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 225 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 165 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 225 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
+ DF + + L +D + Q + APE + S D + FG+ L E FT G
Sbjct: 156 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 215
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
++P W+ ++ ++ ++ + +E E C ++N+ + C
Sbjct: 216 QEP-----------------WIGLNGSQI--LHKIDKEGERLPRPEDCPQDIYNVMVQCW 256
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
PE R + +RD LL
Sbjct: 257 AHKPEDR-------PTFVALRDFLL 274
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
++DF +AKLL +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 152 IADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 164 IGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 223
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C + L C
Sbjct: 224 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLLELMRMCWQ 263
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 264 YNPKMRPSFLEIISSIKEEMEPGFREV 290
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 21/142 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 229 VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + EE+ L +E C + ++ +
Sbjct: 289 LGGSPYPGVPVEELF--------------------KLLKEGHRMDKPSNCTNELYMMMRD 328
Query: 121 CTVESPEQRINAKEIVTKLLKI 142
C P QR K++V L +I
Sbjct: 329 CWHAVPSQRPTFKQLVEDLDRI 350
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 161 LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 220
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 221 ELMTGQLPYSNINNRDQII 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + + + + T+ YM PE ++ S NG DV+S G
Sbjct: 167 LIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 227 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 274
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 275 ------CCLKRDPKQRISIPELLA 292
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
+ DF + + L +D + Q + APE + S D + FG+ L E FT G
Sbjct: 152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 211
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
++P W+ ++ ++ ++ + +E E C ++N+ + C
Sbjct: 212 QEP-----------------WIGLNGSQI--LHKIDKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
PE R + +RD LL
Sbjct: 253 AHKPEDR-------PTFVALRDFLL 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
+ DF + + L +D + Q + APE + S D + FG+ L E FT G
Sbjct: 152 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 211
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
++P W+ ++ ++ ++ + +E E C ++N+ + C
Sbjct: 212 QEP-----------------WIGLNGSQI--LHKIDKEGERLPRPEDCPQDIYNVMVQCW 252
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
PE R + +RD LL
Sbjct: 253 AHKPEDR-------PTFVALRDFLL 270
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 141 LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 201 ELMTGQLPYSNINNRDQII 219
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 1 MVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + D + T T I + APE S+ DV+SFG+++ E
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
G++P + N ++ IS++E E A C + L
Sbjct: 248 LAYGERPYWNMTNRDV-----------ISSVE---------EGYRLPAPMGCPHALHQLM 287
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
+ C + QR +IV+ L D+L+R+
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 158 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 218 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 159 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 219 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 252
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 26/151 (17%)
Query: 1 MVAHLSDFSIAKLLTGE-DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + D + T T I + APE S+ DV+SFG+++ E
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEV 247
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
G++P + N ++ IS++E E A C + L
Sbjct: 248 LAYGERPYWNMTNRDV-----------ISSVE---------EGYRLPAPMGCPHALHQLM 287
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
+ C + QR +IV+ L D+L+R+
Sbjct: 288 LDCWHKDRAQRPRFSQIVSVL----DALIRS 314
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 183 ITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 242
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 243 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 276
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +A LL +D+ + ++ I +MA E G+ + DV+S+G+ + E T G
Sbjct: 174 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 233
Query: 64 KP 65
+P
Sbjct: 234 EP 235
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +A LL +D+ + ++ I +MA E G+ + DV+S+G+ + E T G
Sbjct: 156 VADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGA 215
Query: 64 KP 65
+P
Sbjct: 216 EP 217
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 28/145 (19%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
+ DF + + L +D + Q + APE + S D + FG+ L E FT G
Sbjct: 162 IGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYG 221
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
++P W+ ++ ++ ++ + +E E C ++N+ + C
Sbjct: 222 QEP-----------------WIGLNGSQI--LHKIDKEGERLPRPEDCPQDIYNVMVQCW 262
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
PE R + +RD LL
Sbjct: 263 AHKPEDR-------PTFVALRDFLL 280
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLM 57
+ + DF +A + S Q +I +MAPE R + S DVY+FGI+L
Sbjct: 169 LTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 228
Query: 58 ETFTGKKPTDEIFNEEMTL 76
E TG+ P I N + +
Sbjct: 229 ELMTGQLPYSNINNRDQII 247
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 26/140 (18%)
Query: 3 AHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMET 59
A ++DF +++ QS+ + + L +MAPE E + D YSF ++L
Sbjct: 168 AKVADFGLSQ------QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221
Query: 60 FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
TG+ P DE S ++ +N++ +E + E C + N+
Sbjct: 222 LTGEGPFDE-----------------YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIE 264
Query: 120 ACTVESPEQRINAKEIVTKL 139
C P++R + IV +L
Sbjct: 265 LCWSGDPKKRPHFSYIVKEL 284
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A LT D + + + T +MAPE ++ + D++S GI +E G+
Sbjct: 145 LADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 202
Query: 65 PTDEI 69
P E+
Sbjct: 203 PHSEL 207
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A LT D + + + T +MAPE ++ + D++S GI +E G+
Sbjct: 160 LADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 217
Query: 65 PTDEI 69
P E+
Sbjct: 218 PHSEL 222
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 32/130 (24%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
+V ++DF +A++ I + APE G + DV+SFGI+LME
Sbjct: 315 LVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIV 363
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
T G+ P + N E+ I +E E C ++N+ M
Sbjct: 364 TYGRIPYPGMSNPEV-----------IRALE---------RGYRMPRPENCPEELYNIMM 403
Query: 120 ACTVESPEQR 129
C PE+R
Sbjct: 404 RCWKNRPEER 413
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 28/153 (18%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA---TIGYMAPEYGREGRVSANGDVYSFGIMLM 57
+V +SDF +++ L T T +L I + APE + ++ D +S+GI++
Sbjct: 153 LVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMW 212
Query: 58 ETFT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFN 116
E + G++P ++ N+++ +N + Q D C + +
Sbjct: 213 EVMSFGERPYWDMSNQDV-------------------INAIEQ-DYRLPPPPDCPTSLHQ 252
Query: 117 LAMACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
L + C + R ++V+ L D ++RN
Sbjct: 253 LMLDCWQKDRNARPRFPQVVSAL----DKMIRN 281
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
++ + D AK L DQ T+ + T+ Y+APE + + + D +SFG + E
Sbjct: 162 LIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI 218
Query: 61 TGKKP 65
TG +P
Sbjct: 219 TGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
++ + D AK L DQ T+ + T+ Y+APE + + + D +SFG + E
Sbjct: 161 LIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI 217
Query: 61 TGKKP 65
TG +P
Sbjct: 218 TGFRP 222
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A LT D + + + T +MAPE ++ + D++S GI +E G+
Sbjct: 145 LADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 202
Query: 65 PTDEI 69
P E+
Sbjct: 203 PHSEL 207
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 21/147 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+ DF + + + D + L + +M+PE ++G + DV+SFG++L E T +
Sbjct: 166 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 225
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
+P + NE++ L+ V++ LL + D C + L C
Sbjct: 226 QPYQGLSNEQV-LRF------------VMEGGLLDKPD-------NCPDMLLELMRMCWQ 265
Query: 124 ESPEQRINAKEIVTKLLKIRDSLLRNV 150
+P+ R + EI++ + + + R V
Sbjct: 266 YNPKMRPSFLEIISSIKEEMEPGFREV 292
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 29/144 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVS-ANG----------DVYSFG 53
L DF IA + + S+ + + + YM PE ++ S NG DV+S G
Sbjct: 195 LIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 254
Query: 54 IMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSF 113
+L GK P +I N+ L H + D P +E D+ ++D+ V K
Sbjct: 255 CILYYMTYGKTPFQQIINQISKL-HAIID--PNHEIEFPDI---PEKDLQDVLK------ 302
Query: 114 VFNLAMACTVESPEQRINAKEIVT 137
C P+QRI+ E++
Sbjct: 303 ------CCLKRDPKQRISIPELLA 320
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
++DF +AKLL +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 156 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
++DF +AKLL +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 155 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A LT D + + + T +MAPE ++ + D++S GI +E G+
Sbjct: 165 LADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 222
Query: 65 PTDEI 69
P E+
Sbjct: 223 PHSEL 227
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
++DF +AKLL +D + + + I + APE + S DV+SFG++L E FT
Sbjct: 168 IADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFT 61
+ DF +A + S Q +I +MAPE R S DVY+FGI+L E T
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 62 GKKPTDEIFNEEMTLK 77
G+ P I N + ++
Sbjct: 221 GQLPYSNINNRDQIIE 236
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 3 AHLSDFSIAKLLTGEDQSMT-QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L +D T ++ + + APE + S+ DV+S+G+ + E +
Sbjct: 149 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
Query: 62 -GKKPTDEIFNEEM 74
G+KP ++ E+
Sbjct: 209 YGQKPYKKMKGPEV 222
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 233 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 284
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 285 ECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 22/134 (16%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V ++DF +++L+TG D I + APE S DV++FG++L E T
Sbjct: 168 VVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIAT 226
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P I ++ V L ++ E C V+ L A
Sbjct: 227 YGMSPYPGI--------------------DLSQVYDLLEKGYRMEQPEGCPPKVYELMRA 266
Query: 121 CTVESPEQRINAKE 134
C SP R + E
Sbjct: 267 CWKWSPADRPSFAE 280
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 190 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 3 AHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEY--GREGR-VSANGDVYSFGIMLME 58
H++DF+IA +L E TQ T+A T YMAPE R+G S D +S G+ E
Sbjct: 154 VHITDFNIAAMLPRE----TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYE 209
Query: 59 TFTGKKP 65
G++P
Sbjct: 210 LLRGRRP 216
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 173 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 232
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 233 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 284
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 285 ECWNNNVNQRPSFRDLALRVDQIRDNM 311
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR---EGRVSANGDVYSFGIMLMETFT 61
+ DF +A + S Q +I +MAPE R S DVY+FGI+L E T
Sbjct: 161 IGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220
Query: 62 GKKPTDEIFNEEMTLK 77
G+ P I N + ++
Sbjct: 221 GQLPYSNINNRDQIIE 236
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 159 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 218
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 219 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 270
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 271 ECWNNNVNQRPSFRDLALRVDQIRDNM 297
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 215 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 266
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 267 ECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 198 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 218 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 269
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 270 ECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 218 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 269
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 270 ECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 161 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 220
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 221 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 272
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 273 ECWNNNVNQRPSFRDLALRVDQIRDNM 299
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 155 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 214
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 215 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 266
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 267 ECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 154 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 213
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 214 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 265
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 266 ECWNNNVNQRPSFRDLALRVDQIRDNM 292
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 162 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 221
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 222 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 273
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 274 ECWNNNVNQRPSFRDLALRVDQIRDNM 300
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 160 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 219
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 220 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 271
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 272 ECWNNNVNQRPSFRDLALRVDQIRDNM 298
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 156 IGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 215
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 216 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 267
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 268 ECWNNNVNQRPSFRDLALRVDQIRDNM 294
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 65/147 (44%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 158 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 217
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 218 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 269
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 270 ECWNNNVNQRPSFRDLALRVDQIRDNM 296
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 241 LGYMPYPSKSNQEV 254
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 181 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 241 LGYMPYPSKSNQEV 254
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 173 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 233 LGYMPYPSKSNQEV 246
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 196 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + + + +MAPE + + DV+S+GI+L E F+
Sbjct: 204 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 188 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 248 LGYMPYPSKSNQEV 261
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/151 (21%), Positives = 69/151 (45%), Gaps = 26/151 (17%)
Query: 1 MVAHLSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF +++++ + +++ T T + + APE + + ++ DV+S+GI++ E
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
Query: 60 FT-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
+ G++P ++ N+ DV +E A C + + L
Sbjct: 242 MSYGERPYWDMSNQ--------------------DVIKAIEEGYRLPAPMDCPAGLHQLM 281
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSLLRN 149
+ C + +R ++IV I D ++RN
Sbjct: 282 LDCWQKERAERPKFEQIVG----ILDKMIRN 308
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 158 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 218 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 220 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTL--ATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT- 61
+ DF + K+L +D+ + + + I + APE E + S DV+SFG++L E FT
Sbjct: 155 IGDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
Query: 62 ---GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLA 118
K P E ++ ND M V + L + + + C ++ +
Sbjct: 214 IEKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIM 265
Query: 119 MACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD++
Sbjct: 266 TECWNNNVNQRPSFRDLALRVDQIRDNM 293
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 242 LGYMPYPSKSNQEV 255
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 220 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 162 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 222 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 255
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 160 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 220 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 198 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 258 LGYMPYPSKSNQEV 271
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 182 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 242 LGYMPYPSKSNQEV 255
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 173 VADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 232
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 233 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 273
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 274 HPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF AKLL E++ I +MA E + DV+S+G+ + E T G
Sbjct: 165 ITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E++ + LP + +DV ++
Sbjct: 225 KPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 256 LGYMPYPSKSNQEV 269
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 153 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 212
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 213 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 264
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD +
Sbjct: 265 ECWNNNVNQRPSFRDLALRVDQIRDQM 291
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 256 LGYMPYPSKSNQEV 269
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 13/147 (8%)
Query: 5 LSDFSIAKLLTGEDQSM-TQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-- 61
+ DF + K+L + + + + I + APE E + S DV+SFG++L E FT
Sbjct: 186 IGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI 245
Query: 62 --GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
K P E ++ ND M V + L + + + C ++ +
Sbjct: 246 EKSKSPPAEF------MRMIGND--KQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMT 297
Query: 120 ACTVESPEQRINAKEIVTKLLKIRDSL 146
C + QR + +++ ++ +IRD +
Sbjct: 298 ECWNNNVNQRPSFRDLALRVDQIRDQM 324
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 208 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 268 LGYMPYPSKSNQEV 281
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 196 VAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 256 LGYMPYPSKSNQEV 269
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 199 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 259 LGYMPYPSKSNQEV 272
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 169 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 228
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 229 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 269
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 270 HPKAEMRPSFSELVSRISAIFSTFI 294
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 174 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 234 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 275 HPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 173 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 232
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 233 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 273
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 274 HPKAEMRPSFSELVSRISAIFSTFI 298
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 166 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 225
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 226 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 266
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 267 HPKAEMRPSFSELVSRISAIFSTFI 291
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY---GREGRVSANGDVYSFGIMLME 58
V +SDF +K L G + T+T T T+ YMAPE G G A D++S G ++E
Sbjct: 161 VLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPEIIDKGPRGYGKA-ADIWSLGCTIIE 217
Query: 59 TFTGKKPTDEI 69
TGK P E+
Sbjct: 218 MATGKPPFYEL 228
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 222 VAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 282 LGYMPYPSKSNQEV 295
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + +D+ + + + + PE + S+ D+++FG+++ E ++
Sbjct: 158 VVKVSDFGLSRYVL-DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E T +H + + +L S++ V+ + +
Sbjct: 217 LGKMPYERFTNSE-TAEHIAQG------LRLYRPHLASEK-------------VYTIMYS 256
Query: 121 CTVESPEQRINAKEIVTKLLKIRD 144
C E ++R K +++ +L + D
Sbjct: 257 CWHEKADERPTFKILLSNILDVMD 280
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 174 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 234 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 275 HPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 3 AHLSDFSIAKLLTGEDQSMT-QTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
A +SDF ++K L +D T ++ + + APE + S+ DV+S+G+ + E +
Sbjct: 475 AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
Query: 62 -GKKPTDEIFNEEM 74
G+KP ++ E+
Sbjct: 535 YGQKPYKKMKGPEV 548
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 172 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 231
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 232 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 272
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 273 HPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 171 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 230
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 231 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 271
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 272 HPKAEMRPSFSELVSRISAIFSTFI 296
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY---GREGRVSANGDVYSFGIMLME 58
V +SDF +K L G + T+T T T+ YMAPE G G A D++S G ++E
Sbjct: 147 VLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAPEIIDKGPRGYGKA-ADIWSLGCTIIE 203
Query: 59 TFTGKKPTDEI 69
TGK P E+
Sbjct: 204 MATGKPPFYEL 214
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA + DF +A+ + + + +M PE EG ++ D +SFG++L E F+
Sbjct: 182 VAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
Query: 62 -GKKPTDEIFNEEM 74
G P N+E+
Sbjct: 242 LGYMPYPSKSNQEV 255
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 193 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 252
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 253 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 293
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 294 HPKAEMRPSFSELVSRISAIFSTFI 318
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A LT D + + + T +MAPE ++ + D++S GI +E G+
Sbjct: 161 LADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 218
Query: 65 PTDEI 69
P ++
Sbjct: 219 PNSDM 223
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
++DF +A+LL ++ I +MA E R + DV+S+G+ + E T G
Sbjct: 160 ITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGA 219
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLL 97
KP D I E+ + LP + +DV ++
Sbjct: 220 KPYDGIPAREIPDLLEKGERLPQPPICTIDVYMI 253
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + +D+ + + + + PE + S+ D+++FG+++ E ++
Sbjct: 158 VVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E T +H + + +L S++ V+ + +
Sbjct: 217 LGKMPYERFTNSE-TAEHIAQG------LRLYRPHLASEK-------------VYTIMYS 256
Query: 121 CTVESPEQRINAKEIVTKLLKIRD 144
C E ++R K +++ +L + D
Sbjct: 257 CWHEKADERPTFKILLSNILDVMD 280
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + +D+ + + + + PE + S+ D+++FG+++ E ++
Sbjct: 142 VVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E T +H + + +L S++ V+ + +
Sbjct: 201 LGKMPYERFTNSE-TAEHIAQG------LRLYRPHLASEK-------------VYTIMYS 240
Query: 121 CTVESPEQRINAKEIVTKLLKIRD 144
C E ++R K +++ +L + D
Sbjct: 241 CWHEKADERPTFKILLSNILDVMD 264
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 192 VADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 251
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 252 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 292
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 293 HPKAEMRPSFSELVSRISAIFSTFI 317
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + +D+ + + + + PE + S+ D+++FG+++ E ++
Sbjct: 149 VVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E T +H + + +L S++ V+ + +
Sbjct: 208 LGKMPYERFTNSE-TAEHIAQG------LRLYRPHLASEK-------------VYTIMYS 247
Query: 121 CTVESPEQRINAKEIVTKLLKIRD 144
C E ++R K +++ +L + D
Sbjct: 248 CWHEKADERPTFKILLSNILDVMD 271
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + +D+ + + + + PE + S+ D+++FG+++ E ++
Sbjct: 143 VVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E T +H + + +L S++ V+ + +
Sbjct: 202 LGKMPYERFTNSE-TAEHIAQG------LRLYRPHLASEK-------------VYTIMYS 241
Query: 121 CTVESPEQRINAKEIVTKLLKIRD 144
C E ++R K +++ +L + D
Sbjct: 242 CWHEKADERPTFKILLSNILDVMD 265
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+SDF +++ + ED + ++Q + +MA E + + DV+SFG++L E T G
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTV 123
P I E + NLL + + C ++ L + C
Sbjct: 251 NPYPGIPPERL-------------------FNLL-KTGHRMERPDNCSEEMYRLMLQCWK 290
Query: 124 ESPEQRINAKEIVTKLLKI 142
+ P++R +I L K+
Sbjct: 291 QEPDKRPVFADISKDLEKM 309
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAK-LLTGE-DQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ +L E D +T + +MA E + + + DV+SFG++L E T
Sbjct: 175 VADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 235 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 275
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 276 HPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+SDF +++ + ED + ++Q + +MA E + + DV+SFG++L E T G
Sbjct: 191 ISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-EQCVSFVFNLAMACT 122
P I E + NLL H + + + C ++ L + C
Sbjct: 251 NPYPGIPPERL-------------------FNLLKTG--HRMERPDNCSEEMYRLMLQCW 289
Query: 123 VESPEQRINAKEIVTKLLKI 142
+ P++R +I L K+
Sbjct: 290 KQEPDKRPVFADISKDLEKM 309
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 172 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 231
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 232 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 272
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 273 HPKAEMRPSFSELVSRISAIFSTFI 297
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A LT D + + + T +MAPE ++ D++S GI +E G+
Sbjct: 157 LADFGVAGQLT--DTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP 214
Query: 65 PTDEI 69
P ++
Sbjct: 215 PNSDL 219
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + +D+ + + + + PE + S+ D+++FG+++ E ++
Sbjct: 143 VVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E T +H + + +L S++ V+ + +
Sbjct: 202 LGKMPYERFTNSE-TAEHIAQG------LRLYRPHLASEK-------------VYTIMYS 241
Query: 121 CTVESPEQRINAKEIVTKLLKIRD 144
C E ++R K +++ +L + D
Sbjct: 242 CWHEKADERPTFKILLSNILDVMD 265
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V +SDF +++ + +D+ + + + + PE + S+ D+++FG+++ E ++
Sbjct: 138 VVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
GK P + N E T +H + + +L S++ V+ + +
Sbjct: 197 LGKMPYERFTNSE-TAEHIAQG------LRLYRPHLASEK-------------VYTIMYS 236
Query: 121 CTVESPEQRINAKEIVTKLLKIRD 144
C E ++R K +++ +L + D
Sbjct: 237 CWHEKADERPTFKILLSNILDVMD 260
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 179 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 238
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 239 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 279
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 280 HPKAEMRPSFSELVSRISAIFSTFI 304
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 174 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 234 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 275 HPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 175 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 234
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 235 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 275
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 276 HPKAEMRPSFSELVSRISAIFSTFI 300
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEIFNEEMTLKHW------VNDWLPIST 88
P D+ + W +N W I +
Sbjct: 205 LPWDQPSDSXQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 174 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 233
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 234 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 274
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 275 HPKAEMRPSFSELVSRISAIFSTFI 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 7 DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF +++L ++ T +MAPE R+ + DVYSFG++L E T ++P
Sbjct: 182 DFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.8 bits (81), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-GK 63
+SDF +++ + ED + ++Q + +MA E + + DV+SFG++L E T G
Sbjct: 191 ISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250
Query: 64 KPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAK-EQCVSFVFNLAMACT 122
P I E + NLL H + + + C ++ L + C
Sbjct: 251 NPYPGIPPERL-------------------FNLLKTG--HRMERPDNCSEEMYRLMLQCW 289
Query: 123 VESPEQRINAKEIVTKLLKI 142
+ P++R +I L K+
Sbjct: 290 KQEPDKRPVFADISKDLEKM 309
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E S + D+++ G ++ +
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLV 228
Query: 61 TGKKP 65
G P
Sbjct: 229 AGLPP 233
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 144 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 204 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 234
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.4 bits (80), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/145 (18%), Positives = 59/145 (40%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + ++ +T A + +MA E + + + DV+SFG++L E T
Sbjct: 233 VADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTR 292
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P + D+ + + + E C ++ + + C
Sbjct: 293 GAP-------------------PYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCW 333
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
E R + E+V+++ I + +
Sbjct: 334 HPKAEMRPSFSELVSRISAIFSTFI 358
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 7 DFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
DF +++L + T +MAPE R+ + DVYSFG++L E T ++P
Sbjct: 182 DFGLSRLKAS--XFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 27 LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
+ T+GYMAPE + R + + D ++ G +L E G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 35.0 bits (79), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 27 LATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
+ T+GYMAPE + R + + D ++ G +L E G+ P
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Query: 62 -GKKP 65
G P
Sbjct: 246 LGASP 250
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-GREGRVSANGDVYSFGIMLMETFTGK 63
L+DF ++K D T+ YMAPE R+G S + D +S+G+++ E TG
Sbjct: 171 LTDFGLSK--EAIDHEKKAYSFCGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGS 227
Query: 64 KP 65
P
Sbjct: 228 LP 229
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Query: 62 -GKKP 65
G P
Sbjct: 246 LGASP 250
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 35.0 bits (79), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 146 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 206 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 236
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGK 63
+SDF +A + ++ + T+ Y+APE + A DV+S GI+L G+
Sbjct: 145 ISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 64 KPTDEI------FNEEMTLKHWVNDWLPIST 88
P D+ +++ K ++N W I +
Sbjct: 205 LPWDQPSDSCQEYSDWKEKKTYLNPWKKIDS 235
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.0 bits (79), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 177 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Query: 62 -GKKP 65
G P
Sbjct: 237 LGASP 241
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 177 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Query: 62 -GKKP 65
G P
Sbjct: 237 LGASP 241
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + APE + ++ DV+S+GI++ E
Sbjct: 147 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 206
Query: 60 FT-GKKPTDEIFNEEM 74
+ G++P ++ N+++
Sbjct: 207 MSYGERPYWDMSNQDV 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ E + + T +MAPE D++S GIM++E G+
Sbjct: 168 LSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 225
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTV 123
P FNE P+ M+++ NL + +++H V+ F+ L V
Sbjct: 226 P---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LV 266
Query: 124 ESPEQRINAKEIV 136
P QR A E++
Sbjct: 267 RDPAQRATAAELL 279
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 186 VVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Query: 62 -GKKP 65
G P
Sbjct: 246 LGASP 250
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + APE + ++ DV+S+GI++ E
Sbjct: 153 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 212
Query: 60 FT-GKKPTDEIFNEEM 74
+ G++P ++ N+++
Sbjct: 213 MSYGERPYWDMSNQDV 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ E + + T +MAPE D++S GIM++E G+
Sbjct: 161 LSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTV 123
P FNE P+ M+++ NL + +++H V+ F+ L V
Sbjct: 219 P---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LV 259
Query: 124 ESPEQRINAKEIV 136
P QR A E++
Sbjct: 260 RDPAQRATAAELL 272
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ E + + T +MAPE D++S GIM++E G+
Sbjct: 166 LSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 223
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTV 123
P FNE P+ M+++ NL + +++H V+ F+ L V
Sbjct: 224 P---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LV 264
Query: 124 ESPEQRINAKEIV 136
P QR A E++
Sbjct: 265 RDPAQRATAAELL 277
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Query: 62 -GKKP 65
G P
Sbjct: 246 LGASP 250
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 34.7 bits (78), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ E + + T +MAPE D++S GIM++E G+
Sbjct: 157 LSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTV 123
P FNE P+ M+++ NL + +++H V+ F+ L V
Sbjct: 215 P---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSP-SLKGFLDRL----LV 255
Query: 124 ESPEQRINAKEIV 136
P QR A E++
Sbjct: 256 RDPAQRATAAELL 268
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ E + + T +MAPE D++S GIM++E G+
Sbjct: 211 LSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTV 123
P FNE P+ M+++ NL + +++H V+ F+ L V
Sbjct: 269 P---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LV 309
Query: 124 ESPEQRINAKEIV 136
P QR A E++
Sbjct: 310 RDPAQRATAAELL 322
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.7 bits (78), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQT-LATIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
+V +SDF ++++L + ++ T+ I + APE + ++ DV+S+GI++ E
Sbjct: 168 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEV 227
Query: 60 FT-GKKPTDEIFNEEM 74
+ G++P ++ N+++
Sbjct: 228 MSYGERPYWDMSNQDV 243
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
++ ++DF +A+++ ED T + I + APE G + DV+SFGI+L E
Sbjct: 147 LMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEI 204
Query: 60 FT-GKKP 65
T GK P
Sbjct: 205 VTYGKIP 211
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 34.7 bits (78), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ E + + T +MAPE D++S GIM++E G+
Sbjct: 288 LSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 345
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTV 123
P FNE P+ M+++ NL + +++H V+ F+ L V
Sbjct: 346 P---YFNEP-----------PLKAMKMIRDNLPPRLKNLHKVSPS-LKGFLDRL----LV 386
Query: 124 ESPEQRINAKEIV 136
P QR A E++
Sbjct: 387 RDPAQRATAAELL 399
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 186 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Query: 62 -GKKP 65
G P
Sbjct: 246 LGASP 250
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 182 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 62 -GKKP 65
G P
Sbjct: 242 LGASP 246
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ E + + T +MAPE D++S GIM++E G+
Sbjct: 182 LSDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQ-EDIHFVAKEQCVSFVFNLAMACTV 123
P FNE P+ M + +L + +D+H V+ S + V
Sbjct: 240 P---YFNEP-----------PLQAMRRIRDSLPPRVKDLHKVS-----SVLRGFLDLMLV 280
Query: 124 ESPEQRINAKEIV 136
P QR A+E++
Sbjct: 281 REPSQRATAQELL 293
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF ++K D T+ YMAPE + + D +SFG+++ E TG
Sbjct: 167 LTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 65 P 65
P
Sbjct: 225 P 225
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 188 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
Query: 62 -GKKP 65
G P
Sbjct: 248 LGASP 252
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 177 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Query: 62 -GKKP 65
G P
Sbjct: 237 LGASP 241
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 34.3 bits (77), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF ++K D T+ YMAPE + + D +SFG+++ E TG
Sbjct: 168 LTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
Query: 65 P 65
P
Sbjct: 226 P 226
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 223 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
Query: 62 -GKKP 65
G P
Sbjct: 283 LGASP 287
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 177 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
Query: 62 -GKKP 65
G P
Sbjct: 237 LGASP 241
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 34.3 bits (77), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 236 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
Query: 62 -GKKP 65
G P
Sbjct: 296 LGASP 300
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
Query: 62 -GKKP 65
G P
Sbjct: 291 LGASP 295
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 182 VVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
Query: 62 -GKKP 65
G P
Sbjct: 242 LGASP 246
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 229 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
Query: 62 -GKKP 65
G P
Sbjct: 289 LGASP 293
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
V + DF +A+ + + + + + +MAPE + + DV+SFG++L E F+
Sbjct: 238 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
Query: 62 -GKKP 65
G P
Sbjct: 298 LGASP 302
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 33.9 bits (76), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF ++K D T+ YMAPE + + D +SFG+++ E TG
Sbjct: 167 LTDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 65 P 65
P
Sbjct: 225 P 225
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 151 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 210
Query: 61 TGKKP 65
G P
Sbjct: 211 AGLPP 215
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 33.9 bits (76), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 145 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204
Query: 61 TGKKP 65
G P
Sbjct: 205 AGLPP 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 166 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
Query: 61 TGKKP 65
G P
Sbjct: 226 AGLPP 230
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 146 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 205
Query: 61 TGKKP 65
G P
Sbjct: 206 AGLPP 210
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 147 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 206
Query: 61 TGKKP 65
G P
Sbjct: 207 AGLPP 211
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 33.9 bits (76), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 144 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 203
Query: 61 TGKKP 65
G P
Sbjct: 204 AGLPP 208
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY-----GREGRVSANGDVYSFGIMLMET 59
L DF I+ L S+ +T+ YMAPE R+G DV+S GI L E
Sbjct: 167 LCDFGISGQLV---DSIAKTRDAGCRPYMAPERIDPSASRQG-YDVRSDVWSLGITLYEL 222
Query: 60 FTGKKP 65
TG+ P
Sbjct: 223 ATGRFP 228
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ + DF +A+ + + + + + +MAPE + DV+S+GI L E F+
Sbjct: 206 ITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P +P+ + + +E ++ E + ++++
Sbjct: 266 LGSSPYPG---------------MPVDS----KFYKMIKEGFRMLSPEHAPAEMYDIMKT 306
Query: 121 CTVESPEQRINAKEIV 136
C P +R K+IV
Sbjct: 307 CWDADPLKRPTFKQIV 322
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.9 bits (76), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 4 HLSDFSIAKLL-TGEDQSMTQTQT--LATIGYMAPEYGREGR-VSANGDVYSFGIMLMET 59
++DF ++ L TG D + + + + T +MAPE + R D++SFGI +E
Sbjct: 156 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 215
Query: 60 FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
TG P + ++ + ND + T V D +L + F + +S
Sbjct: 216 ATGAAPYHKYPPMKVLMLTLQNDPPSLET-GVQDKEMLKKYGKSF---RKMISL------ 265
Query: 120 ACTVESPEQRINAKEIV 136
C + PE+R A E++
Sbjct: 266 -CLQKDPEKRPTAAELL 281
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 166 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 225
Query: 61 TGKKP 65
G P
Sbjct: 226 AGLPP 230
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMETFTG 62
L+DF ++K D++ TI YMAP+ R G + D +S G+++ E TG
Sbjct: 200 LTDFGLSKEFVA-DETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
Query: 63 KKP 65
P
Sbjct: 259 ASP 261
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 174 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 233
Query: 61 TGKKP 65
G P
Sbjct: 234 AGLPP 238
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 24/142 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L E + + T YM+PE + S D++S G+ L+E G+
Sbjct: 149 LCDFGVSGQLIDE----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 204
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVE 124
P + E+ L + VN+ P V S E FV K C ++
Sbjct: 205 PRPPMAIFEL-LDYIVNEPPPKLPSAV-----FSLEFQDFVNK-------------CLIK 245
Query: 125 SPEQRINAKEI-VTKLLKIRDS 145
+P +R + K++ V +K D+
Sbjct: 246 NPAERADLKQLMVHAFIKRSDA 267
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 4 HLSDFSIAKLL-TGEDQSMTQTQT--LATIGYMAPEYGREGR-VSANGDVYSFGIMLMET 59
++DF ++ L TG D + + + + T +MAPE + R D++SFGI +E
Sbjct: 161 QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIEL 220
Query: 60 FTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
TG P + ++ + ND + T V D +L + F + +S
Sbjct: 221 ATGAAPYHKYPPMKVLMLTLQNDPPSLET-GVQDKEMLKKYGKSF---RKMISL------ 270
Query: 120 ACTVESPEQRINAKEIV 136
C + PE+R A E++
Sbjct: 271 -CLQKDPEKRPTAAELL 286
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 61 TGKKP 65
G P
Sbjct: 229 AGLPP 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 170 MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
Query: 61 TGKKP 65
G P
Sbjct: 230 AGLPP 234
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 61 TGKKP 65
G P
Sbjct: 227 AGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 61 TGKKP 65
G P
Sbjct: 227 AGLPP 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 61 TGKKP 65
G P
Sbjct: 227 AGLPP 231
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +T E +++ + T +MAPE D++S GIM +E G+
Sbjct: 157 LTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 65 P 65
P
Sbjct: 215 P 215
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ + DF +A+ + + + + + +MAPE + DV+S+GI L E F+
Sbjct: 199 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P +P+ + + +E ++ E + ++++
Sbjct: 259 LGSSPYPG---------------MPVDS----KFYKMIKEGFRMLSPEHAPAEMYDIMKT 299
Query: 121 CTVESPEQRINAKEIV 136
C P +R K+IV
Sbjct: 300 CWDADPLKRPTFKQIV 315
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 61 TGKKP 65
G P
Sbjct: 229 AGLPP 233
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 167 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 226
Query: 61 TGKKP 65
G P
Sbjct: 227 AGLPP 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 170 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 229
Query: 61 TGKKP 65
G P
Sbjct: 230 AGLPP 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 61 TGKKP 65
G P
Sbjct: 229 AGLPP 233
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 228
Query: 61 TGKKP 65
G P
Sbjct: 229 AGLPP 233
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 33.1 bits (74), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 169 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLV 228
Query: 61 TGKKP 65
G P
Sbjct: 229 AGLPP 233
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ + DF +A+ + + + + + +MAPE + DV+S+GI L E F+
Sbjct: 201 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P +P+ + + +E ++ E + ++++
Sbjct: 261 LGSSPYPG---------------MPVDS----KFYKMIKEGFRMLSPEHAPAEMYDIMKT 301
Query: 121 CTVESPEQRINAKEIV 136
C P +R K+IV
Sbjct: 302 CWDADPLKRPTFKQIV 317
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF AK+L+ E + + T Y++PE E + D+++ G ++ +
Sbjct: 172 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 231
Query: 61 TGKKP 65
G P
Sbjct: 232 AGLPP 236
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.1 bits (74), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ + DF +A+ + + + + + +MAPE + DV+S+GI L E F+
Sbjct: 206 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P +P+ + + +E ++ E + ++++
Sbjct: 266 LGSSPYPG---------------MPVDS----KFYKMIKEGFRMLSPEHAPAEMYDIMKT 306
Query: 121 CTVESPEQRINAKEIV 136
C P +R K+IV
Sbjct: 307 CWDADPLKRPTFKQIV 322
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 20/136 (14%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ + DF +A+ + + + + + +MAPE + DV+S+GI L E F+
Sbjct: 183 ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P +P+ + + +E ++ E + ++++
Sbjct: 243 LGSSPYPG---------------MPVDS----KFYKMIKEGFRMLSPEHAPAEMYDIMKT 283
Query: 121 CTVESPEQRINAKEIV 136
C P +R K+IV
Sbjct: 284 CWDADPLKRPTFKQIV 299
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 29/141 (20%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 146 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 65 PTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKE---QCVSFVFNLAM-- 119
P +E + P++ E++D ++ E + S VF+L
Sbjct: 202 PIPPPDAKE-------DSRPPMAIFELLD----------YIVNEPPPKLPSGVFSLEFQD 244
Query: 120 ---ACTVESPEQRINAKEIVT 137
C +++P +R + K+++
Sbjct: 245 FVNKCLIKNPAERADLKQLMV 265
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +T E ++ + T +MAPE D++S GIM +E G+
Sbjct: 158 LTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 65 P 65
P
Sbjct: 216 P 216
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGR-EGRVSANGDVYSFGIMLMETFTGK 63
L DF + G QT ++ Y APE + + + + DV+S GI+L G
Sbjct: 149 LIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGF 207
Query: 64 KPTDE-----IFNEEMTLKHWVNDWLPISTM 89
P D+ ++ + M K+ V WL S++
Sbjct: 208 LPFDDDNVMALYKKIMRGKYDVPKWLSPSSI 238
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +T E ++ + T +MAPE D++S GIM +E G+
Sbjct: 157 LTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 65 P 65
P
Sbjct: 215 P 215
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A + GE Q+ T GY++PE R+ D+++ G++L G
Sbjct: 174 LADFGLAIEVQGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYP 231
Query: 65 P 65
P
Sbjct: 232 P 232
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +T E ++ + T +MAPE D++S GIM +E G+
Sbjct: 158 LTDFGFCAQITPEQSK--RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 65 P 65
P
Sbjct: 216 P 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +T E QS T + T +MAPE D++S GIM +E G+
Sbjct: 157 LTDFGFCAQITPE-QSKRST-MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 65 P 65
P
Sbjct: 215 P 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 32.3 bits (72), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLA-TIGYMAPEYGREGRVSANGDVYSFGIMLMET 59
++ ++DF +A+++ ED T + I + APE G + +V+SFGI+L E
Sbjct: 146 LMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEI 203
Query: 60 FT-GKKP 65
T GK P
Sbjct: 204 VTYGKIP 210
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF + K G +T T Y+APE +E D ++ G++L E G
Sbjct: 165 LADFGMCK--EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222
Query: 65 P-----TDEIF----NEEMTLKHWVND 82
P D++F N+E+ W+++
Sbjct: 223 PFEAENEDDLFEAILNDEVVYPTWLHE 249
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ DF +AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 152 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ DF +AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 153 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 32.0 bits (71), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 1 MVAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETF 60
M ++DF +++ + D + + ++A E + + + DV++FG+ + E
Sbjct: 174 MTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIM 233
Query: 61 T-GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAM 119
T G+ P I N E + ++L + N L Q +C+ V++L
Sbjct: 234 TRGQTPYAGIENAE------IYNYL-------IGGNRLKQ-------PPECMEEVYDLMY 273
Query: 120 ACTVESPEQR 129
C P+QR
Sbjct: 274 QCWSADPKQR 283
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A + GE Q+ T GY++PE R+ D+++ G++L G
Sbjct: 154 LADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP 211
Query: 65 P 65
P
Sbjct: 212 P 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 26 TLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKP 65
++ T GYMAPE ++G ++ D +S G ML + G P
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 26 TLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKP 65
++ T GYMAPE ++G ++ D +S G ML + G P
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A + GE Q+ T GY++PE R+ D+++ G++L G
Sbjct: 165 LADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP 222
Query: 65 P 65
P
Sbjct: 223 P 223
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ DF +AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 31.6 bits (70), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ DF +AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 158 IGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 26 TLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKP 65
++ T GYMAPE ++G ++ D +S G ML + G P
Sbjct: 350 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 26 TLATIGYMAPEYGREG-RVSANGDVYSFGIMLMETFTGKKP 65
++ T GYMAPE ++G ++ D +S G ML + G P
Sbjct: 349 SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 21/145 (14%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLA--TIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF +A+ + + Q A + + A E + R + DV+SFG++L E T
Sbjct: 165 VADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTR 224
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
P P ++ D+ + E C ++ + C
Sbjct: 225 GAP-------------------PYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCW 265
Query: 123 VESPEQRINAKEIVTKLLKIRDSLL 147
P R + +V ++ +I +LL
Sbjct: 266 EADPAVRPTFRVLVGEVEQIVSALL 290
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YMAPE + S D++S G+ L+E G+
Sbjct: 156 LCDFGVSGQLI---DSMANS-FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRY 211
Query: 65 P 65
P
Sbjct: 212 P 212
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+SDF ++K+ ED + T GY+APE + S D +S G++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 65 P 65
P
Sbjct: 217 P 217
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+SDF ++K+ ED + T GY+APE + S D +S G++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 65 P 65
P
Sbjct: 217 P 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 31.2 bits (69), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+SDF ++K+ ED + T GY+APE + S D +S G++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 65 P 65
P
Sbjct: 217 P 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLLT-GEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ DF +AK + G + + + + + APE +E + DV+SFG+ L E T
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 31.2 bits (69), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 152 LGDFGLSRYM--EDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 210 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 249
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 250 AYDPSRRPRFTELKAQLSTI 269
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 146 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 65 PTDEIFNEEMTL 76
P +E+ L
Sbjct: 202 PIPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 31.2 bits (69), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 146 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 65 PTDEIFNEEMTL 76
P +E+ L
Sbjct: 202 PIPPPDAKELEL 213
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 146 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 65 PTDEIFNEEMTL 76
P +E+ L
Sbjct: 202 PIPPPDAKELEL 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 146 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 201
Query: 65 PTDEIFNEEMTL 76
P +E+ L
Sbjct: 202 PIPPPDAKELEL 213
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 30.8 bits (68), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+SDF ++K+ ED + T GY+APE + S D +S G++ G
Sbjct: 160 ISDFGLSKM---EDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 65 P 65
P
Sbjct: 217 P 217
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A + G+ Q+ T GY++PE R+ D+++ G++L G
Sbjct: 147 LADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYP 204
Query: 65 P 65
P
Sbjct: 205 P 205
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.8 bits (68), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 173 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 228
Query: 65 PTDEIFNEEMTL 76
P +E+ L
Sbjct: 229 PIPPPDAKELEL 240
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 157 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 214
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 215 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 254
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 255 AYDPSRRPRFTELKAQLSTI 274
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 152 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 210 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 249
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 250 AYDPSRRPRFTELKAQLSTI 269
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 152 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 210 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 249
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 250 AYDPSRRPRFTELKAQLSTI 269
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 155 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 212
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 213 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 252
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 253 AYDPSRRPRFTELKAQLSTI 272
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 154 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 211
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 212 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 251
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 252 AYDPSRRPRFTELKAQLSTI 271
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 30.8 bits (68), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 208 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 263
Query: 65 PTDEIFNEEMTL 76
P +E+ L
Sbjct: 264 PIPPPDAKELEL 275
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+ DF AK L E+ + T ++APE A D++S G++L TG
Sbjct: 161 ICDFGFAKQLRAENGLLXTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 65 P 65
P
Sbjct: 219 P 219
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 30.8 bits (68), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 149 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 206
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 207 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 246
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 247 AYDPSRRPRFTELKAQLSTI 266
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA ++DF +++ G++ + +T + +MA E + N DV+S+G++L E +
Sbjct: 177 VAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + E+ K LP +N C V++L
Sbjct: 234 LGGTPYCGMTCAELYEK------LPQGYRLEKPLN--------------CDDEVYDLMRQ 273
Query: 121 CTVESPEQRINAKEIVTKL 139
C E P +R + +I+ L
Sbjct: 274 CWREKPYERPSFAQILVSL 292
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 152 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 209
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 210 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 249
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 250 AYDPSRRPRFTELKAQLSTI 269
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA ++DF +++ G++ + +T + +MA E + N DV+S+G++L E +
Sbjct: 170 VAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + E+ K LP +N C V++L
Sbjct: 227 LGGTPYCGMTCAELYEK------LPQGYRLEKPLN--------------CDDEVYDLMRQ 266
Query: 121 CTVESPEQRINAKEIVTKL 139
C E P +R + +I+ L
Sbjct: 267 CWREKPYERPSFAQILVSL 285
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 30.8 bits (68), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 58/139 (41%), Gaps = 24/139 (17%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
VA ++DF +++ G++ + +T + +MA E + N DV+S+G++L E +
Sbjct: 180 VAKIADFGLSR---GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
Query: 62 -GKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMA 120
G P + E+ K LP +N C V++L
Sbjct: 237 LGGTPYCGMTCAELYEK------LPQGYRLEKPLN--------------CDDEVYDLMRQ 276
Query: 121 CTVESPEQRINAKEIVTKL 139
C E P +R + +I+ L
Sbjct: 277 CWREKPYERPSFAQILVSL 295
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 180 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 237
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 238 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 277
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 278 AYDPSRRPRFTELKAQLSTI 297
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 532 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 590 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 629
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 630 AYDPSRRPRFTELKAQLSTI 649
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 5 LSDFSIAKLLTGEDQSMTQ-TQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT-G 62
L DF +++ + ED + + ++ I +MAPE R ++ DV+ FG+ + E G
Sbjct: 532 LGDFGLSRYM--EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHG 589
Query: 63 KKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACT 122
KP + N ++ + + LP+ C +++L C
Sbjct: 590 VKPFQGVKNNDVIGRIENGERLPMPP--------------------NCPPTLYSLMTKCW 629
Query: 123 VESPEQRINAKEIVTKLLKI 142
P +R E+ +L I
Sbjct: 630 AYDPSRRPRFTELKAQLSTI 649
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L DF ++ L SM + + T YM+PE + S D++S G+ L+E G+
Sbjct: 165 LCDFGVSGQLI---DSMANS-FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRY 220
Query: 65 P 65
P
Sbjct: 221 P 221
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 30.4 bits (67), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A + G+ Q+ T GY++PE R+ D+++ G++L G
Sbjct: 147 LADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 65 P 65
P
Sbjct: 205 P 205
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 30.4 bits (67), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLME 58
L DF +A++L D S +T + T YM+PE + D++S G +L E
Sbjct: 157 LGDFGLARILN-HDTSFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.0 bits (66), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+ DF AK L E+ + T ++APE A D++S G++L TG
Sbjct: 161 ICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 65 P 65
P
Sbjct: 219 P 219
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.0 bits (66), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE-------YGREGRVSANGDVYSFGI 54
V L DF A+LLTG S +AT Y +PE YG V A G V++ +
Sbjct: 140 VIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
Query: 55 MLMETFTGKKPTDEIFNEEMTL 76
+ + GK D+++ TL
Sbjct: 198 SGVPLWPGKSDVDQLYLIRKTL 219
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.0 bits (66), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
LSDF ++ + + + T +MAPE + D++S GIM++E G+
Sbjct: 182 LSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Query: 65 P 65
P
Sbjct: 240 P 240
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+D+ + K G T + T Y+APE R + D ++ G+++ E G+
Sbjct: 147 LTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
Query: 65 PTD 67
P D
Sbjct: 205 PFD 207
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 29.6 bits (65), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+DF +A + G+ Q+ T GY++PE R+ D+++ G++L G
Sbjct: 147 LADFGLAIEVQGDQQAWFGFA--GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 65 P 65
P
Sbjct: 205 P 205
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 29.6 bits (65), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+D+ + K G T + T Y+APE R + D ++ G+++ E G+
Sbjct: 162 LTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
Query: 65 PTD 67
P D
Sbjct: 220 PFD 222
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 29.6 bits (65), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 36/140 (25%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIG---------------YMAPEYGREGRVSANGDV 49
++DF +A+L+ E TQ + L ++ +MAPE DV
Sbjct: 149 VADFGLARLMVDEK---TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDV 205
Query: 50 YSFGIMLMETFTGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDVNLLSQEDIHFVAKEQ 109
+SFGI+L E G+ D D+LP +D L + +
Sbjct: 206 FSFGIVLCE-IIGRVNADP-------------DYLP----RTMDFGLNVRGFLDRYCPPN 247
Query: 110 CVSFVFNLAMACTVESPEQR 129
C F + + C PE+R
Sbjct: 248 CPPSFFPITVRCCDLDPEKR 267
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 29.6 bits (65), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+D+ + K G T + T Y+APE R + D ++ G+++ E G+
Sbjct: 151 LTDYGMCK--EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
Query: 65 PTD 67
P D
Sbjct: 209 PFD 211
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 29.6 bits (65), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 28 ATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
T Y+APE + + + D +SFG++L E G+ P
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 29.3 bits (64), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 28 ATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKP 65
T Y+APE + + + D +SFG++L E G+ P
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF ++K++ E Q + +T T GY APE R D++S GI+ G +
Sbjct: 192 IADFGLSKIV--EHQVLMKT-VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
Query: 65 P 65
P
Sbjct: 249 P 249
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 29.3 bits (64), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
L+D+ + K G T + T Y+APE R + D ++ G+++ E G+
Sbjct: 194 LTDYGMCK--EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
Query: 65 PTD 67
P D
Sbjct: 252 PFD 254
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 4 HLSDFSIAKLLTGEDQSMTQTQTLATIG---YMAPEYGREGRVSANGDVYSFGIMLMETF 60
L DF IA++L T A IG Y++PE + D+++ G +L E
Sbjct: 165 QLGDFGIARVLNS-----TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC 219
Query: 61 TGKKPTDEIFNEEMTLKHWVNDWLPISTMEVVDV-NLLSQ 99
T K + + + LK + P+S D+ +L+SQ
Sbjct: 220 TLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQ 259
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 2 VAHLSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ L+DF AK T + + T+ T Y+APE + + D++S G+++
Sbjct: 156 ILKLTDFGFAKETTSHN---SLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC 212
Query: 62 GKKP 65
G P
Sbjct: 213 GYPP 216
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF ++K+ +Q+ + T GY+APE + S D +S G++ G
Sbjct: 150 ITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 65 PTDE 68
P E
Sbjct: 206 PFYE 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 29.3 bits (64), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 5 LSDFSIAK--LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTG 62
++DF + K ++ G +T + T Y+APE + D +++G++L E G
Sbjct: 161 IADFGMCKEHMMDG----VTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 216
Query: 63 KKPTD 67
+ P D
Sbjct: 217 QPPFD 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T+ T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 160 SSRRTELCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 14/87 (16%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF AK + + T Y+APE + + D +SFGI++ E G
Sbjct: 147 ITDFGFAKYVPDVTYXLC-----GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT 201
Query: 65 P---------TDEIFNEEMTLKHWVND 82
P ++I N E+ + N+
Sbjct: 202 PFYDSNTMKTYEKILNAELRFPPFFNE 228
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+SDF ++K+ E + + T GY+APE + S D +S G++ G
Sbjct: 164 ISDFGLSKM---EGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 220
Query: 65 P 65
P
Sbjct: 221 P 221
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANG--DVYSFGIMLMETFTG 62
++DF ++ ++T D + +T + + Y APE G++ A DV+S GI+L G
Sbjct: 149 IADFGLSNIMT--DGNFLKT-SCGSPNYAAPEV-INGKLYAGPEVDVWSCGIVLYVMLVG 204
Query: 63 KKPTDEIF 70
+ P D+ F
Sbjct: 205 RLPFDDEF 212
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLME 58
L DF +A++L D+ + + + T YM+PE + D++S G +L E
Sbjct: 157 LGDFGLARILN-HDEDFAK-EFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLME 58
L DF +A++L D S + + T YM+PE + D++S G +L E
Sbjct: 157 LGDFGLARILN-HDTSFAKA-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 160 SSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 160 SSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
++DF +A L + T Y++PE DV+S G M G+
Sbjct: 153 IADFGLATQLKMPHEK--HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210
Query: 65 PTD 67
P D
Sbjct: 211 PFD 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 28.5 bits (62), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 161 SSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 165 SSRRTDLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+ DF AK L E+ + T ++APE + D++S GI+L G
Sbjct: 166 ICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 65 P 65
P
Sbjct: 224 P 224
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKK 64
+ DF AK L E+ + T ++APE + D++S GI+L G
Sbjct: 166 ICDFGFAKQLRAENGLLMTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 65 P 65
P
Sbjct: 224 P 224
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 15/130 (11%)
Query: 27 LATIGYMAPEYGREG------RVSANGDVYSFGIMLMETFTGKKPTDEIFNEEMTLKHWV 80
+ T YM PE E + D+YSFG++L E ++ EE L +
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV--ARRCVSGGIVEEYQLPY-- 262
Query: 81 NDWLPIST-----MEVVDVNLLSQEDIHFVAKEQCVSFVFNLAMACTVESPEQRINAKEI 135
+D +P E+V + L + + ++C+ + L C +P R+ A +
Sbjct: 263 HDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322
Query: 136 VTKLLKIRDS 145
L K+ +S
Sbjct: 323 KKTLAKMSES 332
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 160 SSRRTXLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 28.1 bits (61), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 177 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 222
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 163 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 162 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 157 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 202
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMETFTG 62
L+DF +A+ +S T + T+ Y AP+ G + + S + D++S G + E TG
Sbjct: 160 LADFGLARAFGIPVRSYTHE--VVTLWYRAPDVLMGSK-KYSTSVDIWSIGCIFAEMITG 216
Query: 63 K 63
K
Sbjct: 217 K 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPEY--GREGRVSANGDVYSFGIMLMETFTG 62
L+DF +A+ +S T + T+ Y AP+ G + + S + D++S G + E TG
Sbjct: 160 LADFGLARAFGIPVRSYTHE--VVTLWYRAPDVLMGSK-KYSTSVDIWSIGCIFAEMITG 216
Query: 63 K 63
K
Sbjct: 217 K 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 163 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 160 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 205
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 159 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 204
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 165 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 165 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 163 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 27.7 bits (60), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 186 SSRRTTLCGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 231
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR D++S G++ E GK P
Sbjct: 165 SSRRTTLCGTLDYLPPEXI-EGRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 164 SSRRTTLCGTLDYLPPEM-IEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ DF + K + T ++ + + + + APE + + DV+SFG+ L E T
Sbjct: 155 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
+ DF +A T + + +TL T Y+APE + S DV+S G ++ GK
Sbjct: 158 IGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 64 KPTDEIFNEEMTLKHWVNDW 83
P + +E L+ N++
Sbjct: 215 PPFETSCLKETYLRIKKNEY 234
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
+ DF +A T + + +TL T Y+APE + S DV+S G ++ GK
Sbjct: 162 IGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
Query: 64 KPTDEIFNEEMTLKHWVNDW 83
P + +E L+ N++
Sbjct: 219 PPFETSCLKETYLRIKKNEY 238
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 27.3 bits (59), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTL-ATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGK 63
+ DF +A T + + +TL T Y+APE + S DV+S G ++ GK
Sbjct: 158 IGDFGLA---TKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
Query: 64 KPTDEIFNEEMTLKHWVNDW 83
P + +E L+ N++
Sbjct: 215 PPFETSCLKETYLRIKKNEY 234
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Query: 5 LSDFSIAKLL-TGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFT 61
+ DF + K + T ++ + + + + APE + + DV+SFG+ L E T
Sbjct: 167 IGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 27.3 bits (59), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 13 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNE 72
LLTG+ T+T +MAPE A DV+S M++ G P + F
Sbjct: 226 LLTGDYIPGTET-------HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 278
Query: 73 EMTLK 77
+ LK
Sbjct: 279 PLCLK 283
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 27.3 bits (59), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)
Query: 13 LLTGEDQSMTQTQTLATIGYMAPEYGREGRVSANGDVYSFGIMLMETFTGKKPTDEIFNE 72
LLTG+ T+T +MAPE A DV+S M++ G P + F
Sbjct: 245 LLTGDYIPGTET-------HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRG 297
Query: 73 EMTLK 77
+ LK
Sbjct: 298 PLCLK 302
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 20 SMTQTQTLATIGYMAPEYGREGRVSANG-DVYSFGIMLMETFTGKKP 65
S +T T+ Y+ PE EGR+ D++S G++ E GK P
Sbjct: 161 SSRRTTLSGTLDYLPPEMI-EGRMHDEKVDLWSLGVLCYEFLVGKPP 206
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 26.9 bits (58), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 15/60 (25%)
Query: 5 LSDFSIAKLLTGEDQSMTQTQTLATIGYMAPE------YGREGRVSANGDVYSFGIMLME 58
+ DF + L + + +T++ T+ YM+PE YG+E D+Y+ G++L E
Sbjct: 177 IGDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEV------DLYALGLILAE 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,376,863
Number of Sequences: 62578
Number of extensions: 163288
Number of successful extensions: 1012
Number of sequences better than 100.0: 522
Number of HSP's better than 100.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 569
Number of HSP's gapped (non-prelim): 523
length of query: 161
length of database: 14,973,337
effective HSP length: 91
effective length of query: 70
effective length of database: 9,278,739
effective search space: 649511730
effective search space used: 649511730
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)