BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 043987
         (152 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
          Length = 90

 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 4/77 (5%)

Query: 39  SHNKSSSSVA--EKGHFVIYTTDQ-RRYVLPLTYLNSSIFLELLKLSEEEYGL-KSDGPI 94
           S N++SS     EKG+  +Y  ++ RR+V+P++YLN   F +LL  +EEE+G    +G +
Sbjct: 14  SANQASSKAVDVEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGL 73

Query: 95  TLPCDAVFMDLVVSFIQ 111
           T+PC       + SF+ 
Sbjct: 74  TIPCSEDVFQHITSFLN 90


>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
          Length = 92

 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 4/62 (6%)

Query: 41 NKSSSSVAE--KGHFVIYTTDQ-RRYVLPLTYLNSSIFLELLKLSEEEYGLKSD-GPITL 96
          N++SS   E  KG+ V+Y  D+ RR+++P++YLN   F +LL  +EEE+G     G +T+
Sbjct: 16 NQASSKSVEVPKGYLVVYVGDKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTI 75

Query: 97 PC 98
          PC
Sbjct: 76 PC 77


>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
          radiata GN=ARG7 PE=2 SV=1
          Length = 92

 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 4/66 (6%)

Query: 37 LGSHNKSSSSV--AEKGHFVIYTTDQ-RRYVLPLTYLNSSIFLELLKLSEEEYGLKSD-G 92
          L + N++SS V  A KG+  +Y  +  +R+V+P+++LN  +F +LL  +EEE+G     G
Sbjct: 12 LSARNEASSKVLDAPKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMG 71

Query: 93 PITLPC 98
           +T+PC
Sbjct: 72 GLTIPC 77


>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 2/63 (3%)

Query: 38 GSHNKSSSSVAEKGHFVIYTTDQ-RRYVLPLTYLNSSIFLELLKLSEEEYGLKSD-GPIT 95
          G    S ++ A KG+  +Y  ++ +R+V+P++YLN   F +LL  +EEE+G     G +T
Sbjct: 7  GIRKASKAADAPKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLT 66

Query: 96 LPC 98
          +PC
Sbjct: 67 IPC 69


>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
          Length = 82

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 43/67 (64%), Gaps = 3/67 (4%)

Query: 35 YHLGSHNKSSSSV-AEKGHFVIYTTDQ-RRYVLPLTYLNSSIFLELLKLSEEEYGLKSD- 91
          + L    K+S++V A KG+  +Y  ++ +R+V+P++Y+N   F +LL  +EEE+G     
Sbjct: 3  FRLPGIRKASNAVDAPKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPM 62

Query: 92 GPITLPC 98
          G +T+PC
Sbjct: 63 GGLTIPC 69


>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
          Length = 93

 Score = 46.2 bits (108), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)

Query: 50 KGHFVIYTTDQ-RRYVLPLTYLNSSIFLELLKLSEEEYGLKSD-GPITLPC 98
          KG+  +Y  D+ RR+ +P++YLN   F ELL  +EEE+G     G +T+PC
Sbjct: 28 KGYAAVYVGDKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPC 78


>sp|P29550|TEBA_STYMY Telomere-binding protein subunit alpha OS=Stylonychia mytilis
          GN=STY56V PE=3 SV=1
          Length = 493

 Score = 34.7 bits (78), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 10/85 (11%)

Query: 1  MISSKRLIKLARKSQMIASMGRERISLPRTNSTDYHLGSHNKSSSSVAEKGHF---VI-- 55
          M S+KR    +R S+  A+  ++     R  ST Y     NK+S + AE  HF   VI  
Sbjct: 1  MSSAKR--STSRVSKKKAAPAKDGAPKKREQSTRYKYVELNKASLTSAEAQHFYGVVIDA 58

Query: 56 ---YTTDQRRYVLPLTYLNSSIFLE 77
             Y T+Q RY+  L  ++ S++L+
Sbjct: 59 TFPYKTNQERYICSLKVVDPSLYLK 83


>sp|P40550|PDR11_YEAST ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=PDR11 PE=1 SV=3
          Length = 1411

 Score = 29.6 bits (65), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 53  FVIYTTDQRRYVLPLTYLNSSIFLELLKLSEEEYGLKSD 91
           +VIY  D   + + + YLN ++F     LS E + LK D
Sbjct: 543 YVIYMKDMHPWFIWIAYLNPAMFAMEAILSNELFNLKLD 581


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.133    0.376 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,417,734
Number of Sequences: 539616
Number of extensions: 1861478
Number of successful extensions: 3659
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3650
Number of HSP's gapped (non-prelim): 12
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)