BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 043988
(151 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 23/161 (14%)
Query: 2 SSNAETDDGTPSFV--------CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEG 53
S+N +D+G S C +C+ S D+ C H +C C+ +Y+ ++
Sbjct: 110 STNTSSDNGLTSISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISE 169
Query: 54 NITNISCPQLGCEARLEFEDCRLILPDDVFA-RWGLALCESALVGHKK-FYCPYKDCSSM 111
+ NISCP+ C R D RLIL DDV ++ + LV +CP DC
Sbjct: 170 SRVNISCPE--CTERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYA 227
Query: 112 LIDEGEAIRKSNCPH-------CRRLFCVQCKVPWHSEFDC 145
+I G A +CP C FC CK WH C
Sbjct: 228 VIAFGCA----SCPKLTCGREGCGTEFCYHCKQIWHPNQTC 264
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 68/161 (42%), Gaps = 23/161 (14%)
Query: 2 SSNAETDDGTPSFV--------CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEG 53
S+N +D+G S C +C+ S D+ C H +C C+ +Y+ ++
Sbjct: 110 STNTSSDNGLTSISKQIGDFIECPLCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISE 169
Query: 54 NITNISCPQLGCEARLEFEDCRLILPDDVFA-RWGLALCESALVGHKK-FYCPYKDCSSM 111
+ NISCP+ C R D RLIL DDV ++ + LV +CP DC
Sbjct: 170 SRVNISCPE--CTERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYA 227
Query: 112 LIDEGEAIRKSNCPH-------CRRLFCVQCKVPWHSEFDC 145
+I G A +CP C FC CK WH C
Sbjct: 228 VIAFGCA----SCPKLTCGREGCGTEFCYHCKQIWHPNQTC 264
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 68/161 (42%), Gaps = 23/161 (14%)
Query: 2 SSNAETDDGTPSFV--------CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEG 53
S+N +D+G S C +C+ S ++ C H +C C+ +Y+ ++
Sbjct: 110 STNTSSDNGLTSISKQIGDFIECPLCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISE 169
Query: 54 NITNISCPQLGCEARLEFEDCRLILPDDVFA-RWGLALCESALVGHKK-FYCPYKDCSSM 111
+ NISCP+ C R D RLIL DDV ++ + LV +CP DC
Sbjct: 170 SRVNISCPE--CTERFNPHDIRLILSDDVLMEKYEEFMLRRWLVADPDCRWCPAPDCGYA 227
Query: 112 LIDEGEAIRKSNCPH-------CRRLFCVQCKVPWHSEFDC 145
+I G A +CP C FC CK WH C
Sbjct: 228 VIAFGCA----SCPKLTCGREGCGTEFCYHCKQIWHPNQTC 264
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 11 TPSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGC--EA 67
P C++C+ +SL ++ C CT+C+ +Y+ + EG + I+CP + C
Sbjct: 25 APLITCKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHG 84
Query: 68 RLEFEDCRLILPDDVFARWG-LALCESALVGHKKFYCPYKDCSSMLI----DEGEAIRKS 122
L+ + ++P D F + L + + +CP DC ++ D G+ +
Sbjct: 85 TLQEAEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVL-V 143
Query: 123 NCPHCRRLFCVQCKVPWHSEFDCSQFQKL 151
CP C FC CK WH+E C Q +
Sbjct: 144 ECPSCHLKFCSCCKDAWHAEVSCRDSQPI 172
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 59/145 (40%), Gaps = 16/145 (11%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCPQLGCEARLEFEDCR 75
C +C+E RS+ + C C C+ RY++S+++ I CP C L+
Sbjct: 3 CRVCLEDRSIKP---LPCCKKPVCDECLKRYLSSQVQLGQAEIQCPITECNKHLDESTIL 59
Query: 76 LILPDDVFARWGLALCESALVGHKKFYCPYKDCSSMLI----------DEGEAIRKSNCP 125
LP D ++ L S + K P C + E K CP
Sbjct: 60 YSLPHDDIIKYKYFLELSRMDSSTK---PCPQCKHFTTFKRKTHIPNPTKSENKLKIQCP 116
Query: 126 HCRRLFCVQCKVPWHSEFDCSQFQK 150
C+ ++C +C PWH +C +++K
Sbjct: 117 SCQFIWCFRCHAPWHEGVNCREYKK 141
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
Query: 11 TPSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGC--EA 67
P C++C+ +SL ++ C CT+C+ +Y+ + EG + I+CP + C
Sbjct: 26 VPLVTCKLCLCEQSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHG 85
Query: 68 RLEFEDCRLILPDDVFARWG-LALCESALVGHKKFYCPYKDCSSM----LIDEGEAIRKS 122
L+ + ++P D F + L + + +CP DC ++ D G+ +
Sbjct: 86 TLQEAEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVL-V 144
Query: 123 NCPHCRRLFCVQCKVPWHSEFDCSQFQ 149
CP C FC CK WH+E C Q
Sbjct: 145 ECPSCHLKFCSCCKDAWHAEVSCRDSQ 171
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 9/147 (6%)
Query: 11 TPSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGC--EA 67
P C++C+ +SL ++ C CT C+ +Y+ + EG + I+CP + C
Sbjct: 25 APLVTCKLCLCEQSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHG 84
Query: 68 RLEFEDCRLILPDDVFARWG-LALCESALVGHKKFYCPYKDCSSM----LIDEGEAIRKS 122
L+ + ++P D F + L + + +CP DC ++ D G+ +
Sbjct: 85 TLQETEIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVL-V 143
Query: 123 NCPHCRRLFCVQCKVPWHSEFDCSQFQ 149
CP C FC CK WH E C Q
Sbjct: 144 ECPSCHLKFCSCCKDAWHEESSCRDSQ 170
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 12 PSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGCEAR-- 68
P C++C+ L + C CT C+ +Y+ + EG T ISCP C R
Sbjct: 16 PLVSCKLCLGEFPLEQMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPKRGH 75
Query: 69 LEFEDCRLILPDDVFARW-GLALCESALVGHKKFYCPYKDCSSM-LIDEGEAI--RKSNC 124
L+ + ++ ++ R+ L + L+ + +CP C ++ + E + + + C
Sbjct: 76 LQENEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQAVCQLKESDTVLPQLVRC 135
Query: 125 PHCRRLFCVQCKVPWHSEFDCSQ 147
C FC CK WH + DC +
Sbjct: 136 SVCTLEFCSACKASWHPDQDCQE 158
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
Query: 12 PSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGC--EAR 68
P C++C+ + + C CT C+ +Y+ + EG T ISCP C +
Sbjct: 16 PLVSCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGH 75
Query: 69 LEFEDCRLILPDDVFARWG-LALCESALVGHKKFYCPYKDCSSM--LIDEG-EAIRKSNC 124
L+ + ++ ++ R+ L L + +CP C ++ L D G + + C
Sbjct: 76 LQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVGLQTPQPVQC 135
Query: 125 PHCRRLFCVQCKVPWHSEFDCSQ 147
CR FC CK WH C +
Sbjct: 136 KACRMEFCSTCKASWHPGQGCPE 158
>sp|Q1L8L6|RN19B_DANRE E3 ubiquitin-protein ligase RNF19B OS=Danio rerio GN=rnf19b PE=3
SV=2
Length = 701
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 21/147 (14%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCPQLGCEARLEFEDCR 75
C +C+ + +++GCSH +C C+ +Y+ ++ + +SCP+ C RL
Sbjct: 107 CPLCLVRQPAEQLPELQGCSHRSCLCCLRQYLRIEITESRVQLSCPE--CAERLAPWQVA 164
Query: 76 LILPD-DVFARWGLALCESALVGHKK-FYCPYKDCSSMLIDEGEAIRKSNCPHCRRL--- 130
LIL D ++ ++ L L +CP DC G A+ S C C RL
Sbjct: 165 LILDDPNLMEKYEEFLLRRCLASDPDCRWCPAPDC-------GFAVIASGCASCPRLVCR 217
Query: 131 -------FCVQCKVPWHSEFDCSQFQK 150
FC CK WH C ++
Sbjct: 218 REGCGAEFCYHCKQAWHPNQTCDSARQ 244
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 14 FVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGCEARLEFE 72
F+C IC + D C H C +C+ Y ++ +G + ++CP+ C +
Sbjct: 219 FLCSICFCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPG 278
Query: 73 DCRLILPDDVFARWGLALCESAL-VGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCRRLF 131
+ ++ D+FAR+ L +S L + YCP + C + + + + C C F
Sbjct: 279 QVKELVEADLFARYDRLLLQSTLDLMADVVYCP-RPCCQLPVMQEPGGTMAICSSCNFAF 337
Query: 132 CVQCKVPWHS 141
C C++ +H
Sbjct: 338 CTLCRLTYHG 347
>sp|Q08B84|RN19B_XENLA E3 ubiquitin-protein ligase RNF19B OS=Xenopus laevis GN=rnf19b PE=2
SV=2
Length = 687
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 15/144 (10%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCPQLGCEARLEFEDCR 75
C +C+ + + ++ C H +C C+ +Y+ ++ + N+ CP+ C RL + R
Sbjct: 95 CPLCLVRQPPEEIPELLSCRHRSCLRCLRQYLRIEICESRVNLRCPE--CAERLSPQHVR 152
Query: 76 LILPDDVFAR-WGLALCESALVGHKK-FYCPYKDCSSMLIDEGEAIRKSNCPH------- 126
IL D + R + L L +CP DC +I G A +CP
Sbjct: 153 AILRDPLLTRKYEEFLLRRCLAADPDCRWCPAPDCGYAVIAYGCA----SCPKLTCEREG 208
Query: 127 CRRLFCVQCKVPWHSEFDCSQFQK 150
CR FC CK WH C ++
Sbjct: 209 CRTEFCYHCKHVWHPNQTCDMARQ 232
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 1 RSSNAETDDGTPSFVCEICVES--RSLYDSFDVKGCSHFNCTSCIVRYIASKL--EGNIT 56
R+ T C+IC + S + + C H C C Y+ +K+ EG
Sbjct: 169 RTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE---CGHKFCMQCWSEYLTTKIMEEGMGQ 225
Query: 57 NISCPQLGCEARLEFEDC-RLILPDDVFARWGLALCESALVGHKKF-YCPYKDCSSMLID 114
ISCP GC+ ++ RLI V ++ + S + ++ +CP DC ++
Sbjct: 226 TISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKV 285
Query: 115 EGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
+ + C C R FC C WH C +K
Sbjct: 286 QYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLKK 320
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 1 RSSNAETDDGTPSFVCEICVES--RSLYDSFDVKGCSHFNCTSCIVRYIASKL--EGNIT 56
R+ T C+IC + S + + C H C C Y+ +K+ EG
Sbjct: 171 RTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE---CGHKFCMQCWSEYLTTKIMEEGMGQ 227
Query: 57 NISCPQLGCEARLEFEDC-RLILPDDVFARWGLALCESALVGHKKF-YCPYKDCSSMLID 114
ISCP GC+ ++ RLI V ++ + S + ++ +CP DC ++
Sbjct: 228 TISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKV 287
Query: 115 EGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
+ + C C R FC C WH C +K
Sbjct: 288 QYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLKK 322
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 1 RSSNAETDDGTPSFVCEICVES--RSLYDSFDVKGCSHFNCTSCIVRYIASKL--EGNIT 56
R+ T C+IC + S + + C H C C Y+ +K+ EG
Sbjct: 169 RTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE---CGHKFCMQCWSEYLTTKIMEEGMGQ 225
Query: 57 NISCPQLGCEARLEFEDC-RLILPDDVFARWGLALCESALVGHKKF-YCPYKDCSSMLID 114
ISCP GC+ ++ RLI V ++ + S + ++ +CP DC ++
Sbjct: 226 TISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKV 285
Query: 115 EGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
+ + C C R FC C WH C +K
Sbjct: 286 QYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLKK 320
>sp|E6ZIJ1|HOIL1_DICLA RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Dicentrarchus labrax GN=rbck1 PE=3 SV=1
Length = 707
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCP----QLGCEARLEF 71
C IC + ++ C H C C+ I E +SCP C L+
Sbjct: 479 CRICYMDLQPGEGVLLRECLHCFCRECLRSVIMLSEE---PEVSCPYRDDTYSCACSLQE 535
Query: 72 EDCRLILPDDVFARW---GLALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCR 128
+ R ++P + + RW GL++ ES G ++C DC + E + + +CP CR
Sbjct: 536 REIRALVPAEEYERWLQRGLSVAESRCEG--SYHCATPDCLGWCVYE-DTVNVFHCPVCR 592
Query: 129 RLFCVQCKVPWHSEFDCSQFQ 149
+ C+ CK H +C Q+Q
Sbjct: 593 KHNCLICKS-IHEGMNCKQYQ 612
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 10/156 (6%)
Query: 1 RSSNAETDDGTPSFVCEICVES--RSLYDSFDVKGCSHFNCTSCIVRYIASKL--EGNIT 56
R+ T C+IC + S + + C H C C Y+ +K+ EG
Sbjct: 143 RTRQMNTRSSAQDMPCQICYLNYPNSYFTGLE---CGHKFCMQCWSEYLTTKIIEEGMGQ 199
Query: 57 NISCPQLGCEARLEFEDC-RLILPDDVFARWGLALCESALVGHKKF-YCPYKDCSSMLID 114
ISCP GC+ ++ RLI V ++ + S + ++ +CP DC ++
Sbjct: 200 TISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKV 259
Query: 115 EGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
+ + C C R FC C WH C +K
Sbjct: 260 QYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLKK 294
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 10/156 (6%)
Query: 1 RSSNAETDDGTPSFVCEICVES--RSLYDSFDVKGCSHFNCTSCIVRYIASKL--EGNIT 56
R+ T C+IC + S + + C H C C Y+ +K+ EG
Sbjct: 143 RTRQMNTRSSALDMPCQICYLNYPNSYFTGLE---CGHKFCMQCWGEYLTTKIIEEGMGQ 199
Query: 57 NISCPQLGCEARLEFEDC-RLILPDDVFARWGLALCESALVGHKKF-YCPYKDCSSMLID 114
ISCP GC+ ++ RLI V ++ + S + ++ +CP DC ++
Sbjct: 200 TISCPAHGCDILVDDNTVMRLITDSKVKLKYQHLITNSFVECNRLLKWCPAPDCHHVVKV 259
Query: 115 EGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
+ + +C C R FC C WH C +K
Sbjct: 260 QYPDAKPVHCK-CGRQFCFNCGENWHDPVKCKWLRK 294
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 9/156 (5%)
Query: 2 SSNAETDDGTPSF---VCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITN 57
S T TP + +C +C S+ L D F C H C C Y +++ +G T
Sbjct: 136 SGYKTTASATPQYRSQMCPVCASSQ-LGDKFYSLACGHSFCKDCWTIYFETQIFQGISTQ 194
Query: 58 ISCPQLGCEARLEFEDCRLILPDDVFAR--WGLALCESALVGHKKF-YCPYKDCSSMLID 114
I C C R+ ED L L R + + + H + +CP +C ++
Sbjct: 195 IGCMAQMCNVRVP-EDLVLTLVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQIIVQS 253
Query: 115 EGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
+ +++ C C FC +C + +H+ DC +K
Sbjct: 254 SEISAKRAICKACHTGFCFRCGMDYHAPTDCQVIKK 289
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 34 CSHFNCTSCIVRYIASKLEGNITNISCPQLGCEARLEFEDCRLILPD-DVFARWGLALCE 92
C H +C C+ Y+ ++ + ISCP+ C RL D RL+L D + ++ +
Sbjct: 134 CPHRSCRDCLRHYLRLEISESRVPISCPE--CSERLNPHDIRLLLADPPLMHKYEEFMLR 191
Query: 93 SALVGHKK-FYCPYKDCSSMLIDEGEAIRKSNCPH-------CRRLFCVQCKVPWHSEFD 144
L +CP DC +I G A +CP C+ FC CK WH
Sbjct: 192 RYLASDPDCRWCPAPDCGYAVIAYGCA----SCPKLTCEREGCQTEFCYHCKQIWHPNQT 247
Query: 145 CSQFQK 150
C ++
Sbjct: 248 CDMARQ 253
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 34 CSHFNCTSCIVRYIASKLEGNITNISCPQLGCEARLEFEDCRLILPD-DVFARWGLALCE 92
C H +C C+ Y+ ++ + ISCP+ C RL D RL+L D + ++ +
Sbjct: 137 CPHRSCRDCLRHYLRLEISESRVPISCPE--CSERLNPHDIRLLLADPPLMHKYEEFMLR 194
Query: 93 SALVGHKK-FYCPYKDCSSMLIDEGEAIRKSNCPH-------CRRLFCVQCKVPWHSEFD 144
L +CP DC +I G A +CP C+ FC CK WH
Sbjct: 195 RYLASDPDCRWCPAPDCGYAVIAYGCA----SCPKLTCEREGCQTEFCYHCKQIWHPNQT 250
Query: 145 CSQFQK 150
C ++
Sbjct: 251 CDMARQ 256
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 61/143 (42%), Gaps = 7/143 (4%)
Query: 12 PSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGCEAR-- 68
P C++C+ ++ + C CT C+ +Y+ + EG T ISCP C R
Sbjct: 16 PLVSCKLCLGEYTVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPKRGH 75
Query: 69 LEFEDCRLILPDDVFARWG-LALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSN---C 124
L+ + ++ ++ ++ L + L+ + +CP C ++ + + I+ C
Sbjct: 76 LQENEIECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEKGIQNPQLVQC 135
Query: 125 PHCRRLFCVQCKVPWHSEFDCSQ 147
C FC CK WH C +
Sbjct: 136 SACDIEFCSACKANWHPGQGCPE 158
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 14 FVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGCEARLEFE 72
F+C IC + + C H C +C+ Y ++ +G + ++CP+ C +
Sbjct: 218 FLCSICFCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPG 277
Query: 73 DCRLILPDDVFARWGLALCESAL-VGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCRRLF 131
+ ++ ++FAR+ L +S+L + YCP + C + + + C C F
Sbjct: 278 QVKELVEAELFARYDRLLLQSSLDLMADVVYCP-RPCCQLPVMQEPGCTMGICSSCNFAF 336
Query: 132 CVQCKVPWHS 141
C C++ +H
Sbjct: 337 CTLCRLTYHG 346
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 24/151 (15%)
Query: 14 FVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCPQLGCEARLEFED 73
+C +C+E + + + C C C+ Y++S+++ I CP C LE
Sbjct: 234 LMCRVCLEDKPIKP---LPCCKKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETT 290
Query: 74 C--RLILPDDVFARWGLAL------------CESALVGHKKFYCPYKDCSSMLIDEGEAI 119
L D + ++ L L C+ KK + P S E+
Sbjct: 291 VVYNLTHEDSIKYKYFLELGRIDSSTKPCPQCKHFTTFKKKGHIPTPSRS-------ESR 343
Query: 120 RKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
K CP C+ ++C +C PWH +C +++K
Sbjct: 344 YKIQCPTCQLIWCFKCHSPWHEGVNCKEYKK 374
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Query: 12 PSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGC--EAR 68
P C++C+ + C CT C+ +Y+ + EG T ISCP C +
Sbjct: 16 PLVSCKLCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGH 75
Query: 69 LEFEDCRLILPDDVFARWG-LALCESALVGHKKFYCPYKDCSSM--LIDEG-EAIRKSNC 124
L+ + ++ ++ R+ L L + +CP C ++ L D G + + C
Sbjct: 76 LQENEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDIGLQTPQLVQC 135
Query: 125 PHCRRLFCVQCKVPWHSEFDCSQ 147
C FC CK WH C +
Sbjct: 136 KACDMEFCSACKARWHPGQGCPE 158
>sp|Q8IWT3|CUL9_HUMAN Cullin-9 OS=Homo sapiens GN=CUL9 PE=1 SV=2
Length = 2517
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 27/141 (19%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNIT-NISCPQLGCEARLEFEDC 74
C +CV D C H+ C SC Y+ +++E N+ N +CP C A+
Sbjct: 2070 CPVCVSPLGCDDDLPSLCCMHYCCKSCWNEYLTTRIEQNLVLNCTCPIADCPAQPTGAFI 2129
Query: 75 RLILPD-DVFARWGLALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCRRLFCV 133
R I+ +V +++ AL + + CS++ +N C R+ C
Sbjct: 2130 RAIVSSPEVISKYEKALLRGYV----------ESCSNL-------TWCTNPQGCDRILCR 2172
Query: 134 Q--------CKVPWHSEFDCS 146
Q K W S F+CS
Sbjct: 2173 QGLGCGTTCSKCGWASCFNCS 2193
>sp|A9JTG5|HOIL1_DANRE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Danio
rerio GN=rbck1 PE=2 SV=1
Length = 714
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCP----QLGCEARLEF 71
C IC + ++ C H C C+ I L ++CP C+ L+
Sbjct: 486 CRICYVELESGEGVLLRECLHCFCKECLRSVI---LMSEDPQVACPYRDESYACDCVLQE 542
Query: 72 EDCRLILPDDVFARW---GLALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCR 128
+ R ++ D + W GL++ ES G ++C DC + E + + +CP C+
Sbjct: 543 REIRALVSVDDYQHWLQRGLSVAESRCEG--SYHCATADCPGWCVYE-DTVNTFHCPVCK 599
Query: 129 RLFCVQCKVPWHSEFDCSQFQ 149
+ C+ CK H +C Q+Q
Sbjct: 600 KQNCLLCKA-IHEGMNCKQYQ 619
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 34 CSHFNCTSCIVRYIASKL--EGNITNISCPQLGCEARLEFEDC-RLILPDDVFARWGLAL 90
C H C C Y+ +K+ EG ISCP C+ ++ RLI V ++ +
Sbjct: 179 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLI 238
Query: 91 CESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQ 149
S + ++ +CP DC ++ + + C C R FC C WH C +
Sbjct: 239 TNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLR 297
Query: 150 K 150
K
Sbjct: 298 K 298
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 7/147 (4%)
Query: 9 DGTPSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGC-- 65
D P C++C+ L + C C+ C+ +Y+ + EG T ISCP C
Sbjct: 13 DLAPLLSCKLCLGEFPLEQMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACPK 72
Query: 66 EARLEFEDCRLILPDDVFARWG-LALCESALVGHKKFYCPYKDCSSM-LIDEGEA--IRK 121
+ L + ++ +V + L L+ + +CP C ++ ++E E +
Sbjct: 73 QGHLLENEIECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQAVCQLNEAEVQLPQP 132
Query: 122 SNCPHCRRLFCVQCKVPWHSEFDCSQF 148
CP C FC C+ H+ C +
Sbjct: 133 VQCPECSLRFCSACRADCHTGQACQEM 159
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 34 CSHFNCTSCIVRYIASKL--EGNITNISCPQLGCEARLEFEDC-RLILPDDVFARWGLAL 90
C H C C Y+ +K+ EG ISCP C+ ++ RLI V ++ +
Sbjct: 173 CGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKVKLKYQHLI 232
Query: 91 CESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQ 149
S + ++ +CP DC ++ + + C C R FC C WH C +
Sbjct: 233 TNSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCK-CGRQFCFNCGENWHDPVKCKWLR 291
Query: 150 K 150
K
Sbjct: 292 K 292
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGCEARLEFEDC 74
C+IC + C H C CI ++ + EG + +ISCP C+ ++ +
Sbjct: 616 CKICYMEYDQSNEVFTLECDHVYCFDCITEHLRILITEGRVLDISCPHPQCKKEIKESEI 675
Query: 75 RLILPDDVFARWGLALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCRRLFCVQ 134
++ + + ++ ++L +CP DC + + E NCP C FC
Sbjct: 676 YMLTNEKNWLKYQKFSMIASLKTEPIKWCPTPDCDTPVRGGSERNPILNCPKCSNDFCWI 735
Query: 135 C 135
C
Sbjct: 736 C 736
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 25/130 (19%)
Query: 39 CTSCIVRYIASKL-EGNITNISCPQLGCEARLEFED--------------CRLILPDDVF 83
C C ++ L E +IT++ CP G R + D R L D +
Sbjct: 716 CPECFRQHFTIALKEKHITDMVCPACG---RPDLTDDAQLLSYFSTLDIQLRESLDPDAY 772
Query: 84 ARWGLALCESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCPHCRRLFCVQCKVPW--- 139
A + L E+ L+ KF +C CS I E E + ++ CP C + FCV+CK W
Sbjct: 773 ALFHKKLTEAVLMRDPKFLWC--AQCSFGFIYEREQL-EATCPQCHQTFCVRCKRQWEEQ 829
Query: 140 HSEFDCSQFQ 149
H C FQ
Sbjct: 830 HRGRSCEDFQ 839
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIV-RYIASKLEGNITNISCPQLGCEARLEFEDC 74
C IC+ + D + ++GCSH C +C++ ++ AS + I C + C A + D
Sbjct: 1561 CPICLSE--VDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADM 1618
Query: 75 RLILPDDVFARWGLALCESALVGH---KKFYCPYKDCSSMLIDEG--EAIRKSNCPHCRR 129
R +L + ++ SA V K +C DC S+ G E+ C C
Sbjct: 1619 RALLSQEKLDEL-ISASLSAFVTSSDGKLRFCSTPDCPSIYRVAGPQESGEPFICGACHS 1677
Query: 130 LFCVQCKVPWHSEFDCSQFQKL 151
C +C + +H C +++K
Sbjct: 1678 ETCTRCHLEYHPLITCERYKKF 1699
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 54/130 (41%), Gaps = 25/130 (19%)
Query: 39 CTSCIVRYIASKL-EGNITNISCPQLGCEARLEFED--------------CRLILPDDVF 83
C C ++ L E +IT++ CP G R + D R L D +
Sbjct: 722 CPDCFRQHFTIALKEKHITDMVCPACG---RPDLTDDTQLLSYFSTLDIQLRESLEPDAY 778
Query: 84 ARWGLALCESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCPHCRRLFCVQCKVPW--- 139
A + L E L+ KF +C CS I E E + ++ CP C + FCV+CK W
Sbjct: 779 ALFHKKLTEGVLMRDPKFLWC--AQCSFGFIYEREQL-EATCPQCHQTFCVRCKRQWEEQ 835
Query: 140 HSEFDCSQFQ 149
H C FQ
Sbjct: 836 HRGRSCEDFQ 845
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 26/148 (17%)
Query: 14 FVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGCEARLEFE 72
F C IC + + ++F ++ C H C +C YI KL EGNI I+C + C L+ E
Sbjct: 177 FTCIICCDKKDT-ETFALE-CGHEYCINCYRHYIKDKLHEGNI--ITC--MDCSLALKNE 230
Query: 73 DCRLILPDDVFARWGLALCESALVGHKKFY--CPYKDCSSMLIDEGEAIRKSNCPHCRRL 130
D ++ ++ + +S + H + Y CP+ DC S++ S+ P RL
Sbjct: 231 DIDKVMGHPSSSKLMDSSIKSFVQKHNRNYKWCPFADCKSIV----HLRDTSSLPEYTRL 286
Query: 131 -------------FCVQCKVPWHSEFDC 145
FC C HS DC
Sbjct: 287 HYSPFVKCNSFHRFCFNCGFEVHSPADC 314
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 12 PSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNI-TNISCPQLGCEARLE 70
P C +C++ + + C H C SC ++ + ++ + +SC C R
Sbjct: 135 PPHHCAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTP 193
Query: 71 FEDCRLILP-DDVFARWGLALCESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCPHCR 128
+ +LP +++ ++ L + H + CP DC ++ + R+ C C
Sbjct: 194 EDFVFPLLPNEELREKYRRYLFRDYVESHYQLQLCPGADCPMVIRVQEPRARRVQCNRCN 253
Query: 129 RLFCVQCKVPWHSEFDCSQFQK 150
+FC +C+ +H+ DC+ +K
Sbjct: 254 EVFCFKCRQMYHAPTDCATIRK 275
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL--EGNITNISCPQLGCEARLE-FE 72
CEIC S+ DS C H C C Y+++K+ EG ISC GC+ ++
Sbjct: 133 CEICF-SQLPPDSMAGLECGHRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDVT 191
Query: 73 DCRLILPDDVFARWGLALCESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCPHCRRLF 131
L+ V ++ + S + ++ +CP DC+ + R+ +C C +F
Sbjct: 192 VANLVTDARVRVKYQQLITNSFVECNQLLRWCPSVDCTYAVKVPYAEPRRVHCK-CGHVF 250
Query: 132 CVQCKVPWHSEFDCSQFQK 150
C C WH C +K
Sbjct: 251 CFACGENWHDPVKCRWLKK 269
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 12 PSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNI-TNISCPQLGCEARLE 70
P C +C++ + + C H C SC ++ + ++ + ISC C R
Sbjct: 134 PPHHCAVCMQFVRKENLLSL-ACQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTP 192
Query: 71 FEDCRLILPDDVFA-RWGLALCESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCPHCR 128
+ +LP++ ++ L + H + CP DC ++ + R+ C C
Sbjct: 193 EDFVFPLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADCPMVIRVQEPRARRVQCNRCS 252
Query: 129 RLFCVQCKVPWHSEFDCSQFQK 150
+FC +C+ +H+ DC+ +K
Sbjct: 253 EVFCFKCRQMYHAPTDCATIRK 274
>sp|Q62921|HOIL1_RAT RanBP-type and C3HC4-type zinc finger-containing protein 1
OS=Rattus norvegicus GN=Rbck1 PE=1 SV=3
Length = 508
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCP----QLGCEARLEF 71
C +C + ++ ++ C H C C+ I + E + SCP C +L
Sbjct: 280 CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEV---SCPFIDNTYSCPGKLLE 336
Query: 72 EDCRLILPDDVFARW---GLALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCR 128
+ R +L + + R+ G+++ E+ ++C DC E + + + CP C
Sbjct: 337 REIRALLSPEDYQRFLDLGVSIAENR--STLSYHCKTPDCRGWCFFEDD-VNEFTCPVCT 393
Query: 129 RLFCVQCKVPWHSEFDCSQFQ 149
R+ C+ CK H +C ++Q
Sbjct: 394 RVNCLLCKA-IHERMNCREYQ 413
>sp|Q9WUB0|HOIL1_MOUSE RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Mus
musculus GN=Rbck1 PE=1 SV=2
Length = 508
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCP----QLGCEARLEF 71
C +C + ++ ++ C H C C+ I + E + +CP C +L
Sbjct: 280 CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEAEV---ACPFIDSTYSCPGKLLE 336
Query: 72 EDCRLILPDDVFARW---GLALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCR 128
+ R +L + + R+ G+++ E+ ++C DC E + + + CP C
Sbjct: 337 REIRALLSPEDYQRFLDLGVSIAENR--STLSYHCKTPDCRGWCFFEDD-VNEFTCPVCT 393
Query: 129 RLFCVQCKVPWHSEFDCSQFQ 149
R+ C+ CK H +C ++Q
Sbjct: 394 RVNCLLCKA-IHEHMNCREYQ 413
>sp|Q84RQ8|ARI15_ARATH Probable E3 ubiquitin-protein ligase ARI15 OS=Arabidopsis thaliana
GN=ARI15 PE=2 SV=1
Length = 452
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 34 CSHFNCTSCIVRYIASK---LEGNITNISCPQLGCEARLEFEDCRLILPDD--VFARWGL 88
CSH C +C +Y+ +E N T ISCP C A + E + D ++ + L
Sbjct: 54 CSHKFCKACWSKYLKKNFFSVEKNHTAISCPDRDCRAAVGPETVEKLTVRDQAMYELYIL 113
Query: 89 ALCESALVGHKKFYCPYKDCSSM----LIDEGEAIRKSNCPHCRRLFCVQCKVPWHSEFD 144
+G K CP + C+ + L E E + C +FC +C + H
Sbjct: 114 KSYREKYLGWKLKLCPARGCNYVIEFHLASEDEEHSLNIVCLCGHIFCWRCMLESHRPVT 173
Query: 145 CSQ 147
C+
Sbjct: 174 CNN 176
>sp|Q8W468|ARI8_ARATH Probable E3 ubiquitin-protein ligase ARI8 OS=Arabidopsis thaliana
GN=ARI8 PE=2 SV=1
Length = 567
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 51/139 (36%), Gaps = 6/139 (4%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNIT--NISCPQLGCEARLEFED 73
C IC E+ L D C H C SC YI + + + CP C A + +
Sbjct: 128 CGICFET-FLSDKLHAAACGHPFCDSCWEGYITTAINDGPGCLTLRCPDPSCRAAVGQDM 186
Query: 74 CRLILPDDVFARWGLALCESALVGHKKF-YCPYKDCS-SMLIDEGEAIRKSNCPHCRRLF 131
L+ PD ++ S + ++K +CP C ++ G NC C F
Sbjct: 187 INLLAPDKDKQKYTSYFVRSYVEDNRKTKWCPAPGCDYAVNFVVGSGNYDVNC-RCCYSF 245
Query: 132 CVQCKVPWHSEFDCSQFQK 150
C C H DC K
Sbjct: 246 CWNCAEEAHRPVDCDTVSK 264
>sp|Q9BYM8|HOIL1_HUMAN RanBP-type and C3HC4-type zinc finger-containing protein 1 OS=Homo
sapiens GN=RBCK1 PE=1 SV=2
Length = 510
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 14/142 (9%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCP----QLGCEAR-LE 70
C +C + ++ ++ C H C C+ I + E +SCP C + LE
Sbjct: 282 CPVCYSVLAPGEAVVLRECLHTFCRECLQGTIRNSQEA---EVSCPFIDNTYSCSGKLLE 338
Query: 71 FEDCRLILPDDV--FARWGLALCESALVGHKKFYCPYKDCSSMLIDEGEAIRKSNCPHCR 128
E L+ P+D F G+++ E+ ++C DC E + + + CP C
Sbjct: 339 REIKALLTPEDYQRFLDLGISIAENR--SAFSYHCKTPDCKGWCFFEDD-VNEFTCPVCF 395
Query: 129 RLFCVQCKVPWHSEFDCSQFQK 150
+ C+ CK H + +C ++Q+
Sbjct: 396 HVNCLLCKA-IHEQMNCKEYQE 416
>sp|Q6NYK8|MARH5_DANRE E3 ubiquitin-protein ligase MARCH5 OS=Danio rerio GN=march5 PE=2
SV=1
Length = 289
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 32 KGCSHFNCTSCIVRYIASKLEGNITN-ISCPQLGCEARLEF 71
KGC+ + SC+ R++ K +GN +SCPQ G E R+ F
Sbjct: 34 KGCTKWIHQSCLQRWLDEKQKGNSGGAVSCPQCGTEYRIVF 74
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Query: 16 CEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNI--TNISCPQLGCEARLEFED 73
C IC ES + + V C H C +C YI +K+E + CP+ C A + +
Sbjct: 128 CGICFESYTREEIARV-SCGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDM 186
Query: 74 CRLILPDDVFARWGLALCESALVGHKKF-YCPYKDCSSMLIDEGEAIRKSNCP-HCRRLF 131
+ V ++ + S + KK +CP C + G + C F
Sbjct: 187 IEDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRF 246
Query: 132 CVQCKVPWHSEFDCSQFQK 150
C C HS DC K
Sbjct: 247 CWNCSEDAHSPVDCDTVSK 265
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 117 EAIRKSNCPHCRRLFCVQCKVPWHSEFDCSQFQK 150
E+ K CP C+ ++C +C PWH +C +++K
Sbjct: 76 ESKYKIQCPTCQFVWCFKCHSPWHEGVNCKEYKK 109
>sp|Q9US46|ITT1_SCHPO E3 ubiquitin-protein ligase itt1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=itt1 PE=4 SV=1
Length = 435
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 18/141 (12%)
Query: 14 FVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKL-EGNITNISCPQLGCEARLEFE 72
F C +C + + D F + C H +C SC+ Y + EG + I C L C +
Sbjct: 172 FQCNVCFDEFNGTDCFQLTRCGHVSCQSCLRDYYTMCIQEGMFSQIKCIDLDCG-----K 226
Query: 73 DCRLILPDDVFARWGLALCESALVGHKK---------FYCPYKDCSS-MLIDEGEAIRKS 122
D ++ ++ + G+ L +K +CP C D G+ + +
Sbjct: 227 DAPVLTLKELESIVGVQLTNRYKELEEKRRYENDSNIIFCPRSFCQGPSKRDPGQKL--A 284
Query: 123 NCPHCRRLFCVQCKVPWHSEF 143
C C FC C+ WH +
Sbjct: 285 ICQKCDFAFCSFCQATWHGDL 305
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 3/95 (3%)
Query: 15 VCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCPQLGCEARLEFEDC 74
CEIC + L F C H C +C +Y+ S++ + I CP+ C + +
Sbjct: 130 TCEICYDEGCL--PFFSAECDHEFCLACYRQYLDSRISEGESVIQCPEESCTQIVSIQSI 187
Query: 75 RLILPDDVFARWGLALCESALVGHKKF-YCPYKDC 108
+L + R+ L S + + +CP DC
Sbjct: 188 TKVLDEKSLDRYHRLLDRSFVDDNDHLRWCPAPDC 222
>sp|P22682|CBL_MOUSE E3 ubiquitin-protein ligase CBL OS=Mus musculus GN=Cbl PE=1 SV=3
Length = 913
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 10 GTPSFVCEICVESRSLYDSFDVKGCSHFNCTSCIVRYIASKLEGNITNISCPQLGCEAR 68
G+ +C+IC E+ ++ C H CTSC+ + S+ +G CP CE +
Sbjct: 373 GSTFQLCKICAENDK---DVKIEPCGHLMCTSCLTSWQESEGQG------CPFCRCEIK 422
>sp|Q9FFN9|ARI13_ARATH Probable E3 ubiquitin-protein ligase ARI13 OS=Arabidopsis thaliana
GN=ARI13 PE=2 SV=1
Length = 536
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 34 CSHFNCTSCIVRYIASK---LEGNITNISCPQLGCEARLEFEDCRLIL--PDDVFARWGL 88
CSH C SC +Y+ +E T ISCP C+A + + + + +++ + L
Sbjct: 106 CSHMFCKSCWRKYLEKNFYLVEKTQTRISCPHGACQAAVGPDTIQKLTVCDQEMYVEYIL 165
Query: 89 ALCESALVGHKKF---YCPYKDCSSML 112
S + G+K YCP +DC+ ++
Sbjct: 166 ---RSYIEGNKVLEIKYCPAQDCNYVI 189
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.139 0.470
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,634,059
Number of Sequences: 539616
Number of extensions: 2025877
Number of successful extensions: 5841
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 5707
Number of HSP's gapped (non-prelim): 174
length of query: 151
length of database: 191,569,459
effective HSP length: 107
effective length of query: 44
effective length of database: 133,830,547
effective search space: 5888544068
effective search space used: 5888544068
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 56 (26.2 bits)